View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13692_low_12 (Length: 351)

Name: NF13692_low_12
Description: NF13692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13692_low_12
NF13692_low_12
[»] chr1 (49 HSPs)
chr1 (79-329)||(32887321-32887571)
chr1 (1-80)||(26471118-26471197)
chr1 (1-80)||(27159411-27159490)
chr1 (1-80)||(44668146-44668225)
chr1 (1-79)||(9981646-9981724)
chr1 (1-78)||(31842848-31842925)
chr1 (1-78)||(39402019-39402096)
chr1 (1-78)||(47216752-47216829)
chr1 (1-81)||(11795930-11796010)
chr1 (1-81)||(14984834-14984914)
chr1 (1-84)||(44955259-44955342)
chr1 (1-79)||(34042695-34042773)
chr1 (1-78)||(1050888-1050965)
chr1 (1-78)||(23278054-23278131)
chr1 (1-78)||(47777534-47777611)
chr1 (4-80)||(12483684-12483760)
chr1 (1-80)||(47588390-47588469)
chr1 (1-72)||(47969700-47969772)
chr1 (1-79)||(17556751-17556830)
chr1 (1-80)||(25694317-25694396)
chr1 (6-79)||(11897053-11897126)
chr1 (1-79)||(16448161-16448239)
chr1 (32-81)||(11897138-11897187)
chr1 (4-79)||(12213530-12213605)
chr1 (24-79)||(37552217-37552272)
chr1 (22-80)||(12483626-12483684)
chr1 (32-85)||(1050972-1051025)
chr1 (1-78)||(37552141-37552218)
chr1 (32-80)||(14984921-14984969)
chr1 (32-72)||(44955212-44955252)
chr1 (32-79)||(17556837-17556884)
chr1 (32-79)||(25694403-25694450)
chr1 (32-78)||(11796017-11796063)
chr1 (32-78)||(27159358-27159404)
chr1 (32-78)||(31842795-31842841)
chr1 (32-78)||(39401966-39402012)
chr1 (32-78)||(44668093-44668139)
chr1 (32-78)||(47777481-47777527)
chr1 (32-73)||(9981731-9981772)
chr1 (6-63)||(11989796-11989853)
chr1 (32-81)||(34042780-34042829)
chr1 (51-82)||(9302041-9302072)
chr1 (32-79)||(47216698-47216745)
chr1 (32-78)||(26471065-26471111)
chr1 (45-79)||(47678371-47678405)
chr1 (20-69)||(5392218-5392267)
chr1 (42-79)||(39720779-39720816)
chr1 (24-68)||(12062635-12062679)
chr1 (22-78)||(19391948-19392004)
[»] chr2 (49 HSPs)
chr2 (1-84)||(41478692-41478775)
chr2 (1-80)||(37990066-37990145)
chr2 (1-79)||(3055557-3055635)
chr2 (1-79)||(4683985-4684063)
chr2 (1-79)||(15896841-15896919)
chr2 (1-79)||(44397546-44397624)
chr2 (1-79)||(44398685-44398763)
chr2 (1-78)||(13197763-13197840)
chr2 (1-78)||(16044370-16044447)
chr2 (1-78)||(37666663-37666740)
chr2 (1-81)||(13344481-13344561)
chr2 (1-79)||(16243836-16243914)
chr2 (1-79)||(38917575-38917653)
chr2 (1-78)||(6648572-6648649)
chr2 (1-85)||(9047808-9047892)
chr2 (1-85)||(15372219-15372303)
chr2 (1-84)||(12337990-12338073)
chr2 (1-76)||(30099235-30099310)
chr2 (1-67)||(41492949-41493015)
chr2 (4-78)||(12170455-12170529)
chr2 (1-72)||(31150659-31150730)
chr2 (1-50)||(44804631-44804680)
chr2 (32-80)||(41492894-41492942)
chr2 (32-82)||(37990009-37990059)
chr2 (32-81)||(3055642-3055691)
chr2 (32-80)||(6648517-6648565)
chr2 (32-80)||(9047753-9047801)
chr2 (32-80)||(41478637-41478685)
chr2 (32-79)||(38917521-38917568)
chr2 (32-79)||(44398770-44398817)
chr2 (32-78)||(12337937-12337983)
chr2 (32-78)||(13197710-13197756)
chr2 (20-78)||(13724102-13724160)
chr2 (32-78)||(15372310-15372356)
chr2 (32-78)||(15896926-15896972)
chr2 (32-85)||(16243776-16243829)
chr2 (6-59)||(16734802-16734855)
chr2 (6-47)||(41453090-41453131)
chr2 (7-63)||(4553069-4553125)
chr2 (20-80)||(23227344-23227404)
chr2 (32-80)||(37666608-37666656)
chr2 (32-79)||(13344568-13344615)
chr2 (32-79)||(30099181-30099228)
chr2 (32-79)||(44397631-44397678)
chr2 (32-78)||(16044317-16044363)
chr2 (13-79)||(30852682-30852748)
chr2 (32-73)||(44804583-44804624)
chr2 (24-80)||(10069283-10069339)
chr2 (32-64)||(36089457-36089489)
[»] chr7 (40 HSPs)
chr7 (1-86)||(46840852-46840937)
chr7 (1-81)||(1565782-1565862)
chr7 (1-80)||(1738500-1738579)
chr7 (1-80)||(7240747-7240826)
chr7 (1-79)||(38063966-38064044)
chr7 (1-78)||(23314192-23314269)
chr7 (1-78)||(31319452-31319529)
chr7 (1-85)||(36583388-36583472)
chr7 (1-80)||(9268754-9268833)
chr7 (1-79)||(7482224-7482302)
chr7 (1-79)||(28536804-28536882)
chr7 (1-80)||(22285697-22285776)
chr7 (1-78)||(94371-94448)
chr7 (1-78)||(36016249-36016326)
chr7 (1-78)||(38441460-38441537)
chr7 (1-84)||(4790242-4790325)
chr7 (1-62)||(33418392-33418453)
chr7 (1-81)||(9575406-9575486)
chr7 (4-72)||(40840175-40840243)
chr7 (32-80)||(1738445-1738493)
chr7 (32-80)||(7240833-7240881)
chr7 (32-80)||(7482309-7482357)
chr7 (32-79)||(9268840-9268887)
chr7 (32-78)||(22285783-22285829)
chr7 (32-78)||(23314139-23314185)
chr7 (32-78)||(38441544-38441590)
chr7 (32-78)||(46840944-46840990)
chr7 (32-72)||(33418460-33418500)
chr7 (32-80)||(36583479-36583527)
chr7 (32-80)||(38063911-38063959)
chr7 (32-79)||(4790332-4790379)
chr7 (32-71)||(40840126-40840165)
chr7 (24-71)||(46877666-46877713)
chr7 (32-78)||(94318-94364)
chr7 (32-78)||(31319399-31319445)
chr7 (1-78)||(7269458-7269535)
chr7 (46-86)||(3411449-3411489)
chr7 (49-81)||(7107750-7107782)
chr7 (34-78)||(9575495-9575539)
chr7 (32-68)||(36016206-36016242)
[»] chr8 (47 HSPs)
chr8 (1-85)||(54665-54749)
chr8 (1-80)||(2890215-2890294)
chr8 (1-80)||(7785831-7785910)
chr8 (1-80)||(7805752-7805831)
chr8 (1-79)||(43199407-43199485)
chr8 (1-78)||(3304331-3304408)
chr8 (1-78)||(6552655-6552732)
chr8 (1-78)||(12343193-12343270)
chr8 (1-78)||(32114528-32114605)
chr8 (1-78)||(44498240-44498317)
chr8 (1-79)||(12763707-12763785)
chr8 (1-79)||(25601053-25601131)
chr8 (1-79)||(32211416-32211494)
chr8 (1-78)||(15888405-15888482)
chr8 (1-78)||(31654613-31654690)
chr8 (1-78)||(39571256-39571333)
chr8 (1-80)||(33289314-33289393)
chr8 (16-86)||(4245649-4245719)
chr8 (1-78)||(7012171-7012248)
chr8 (1-79)||(13578856-13578934)
chr8 (1-75)||(28463614-28463688)
chr8 (1-78)||(8587170-8587247)
chr8 (24-85)||(27422266-27422327)
chr8 (24-79)||(25600999-25601054)
chr8 (32-81)||(39571200-39571249)
chr8 (32-80)||(7785776-7785824)
chr8 (32-79)||(54611-54658)
chr8 (32-79)||(2890161-2890208)
chr8 (10-81)||(24692040-24692111)
chr8 (34-81)||(32211360-32211407)
chr8 (32-79)||(43199353-43199400)
chr8 (32-78)||(6552739-6552785)
chr8 (32-82)||(7012255-7012305)
chr8 (32-82)||(12763650-12763700)
chr8 (21-71)||(13246801-13246851)
chr8 (32-86)||(15888344-15888398)
chr8 (7-73)||(17006916-17006982)
chr8 (7-73)||(17570265-17570331)
chr8 (32-78)||(33289261-33289307)
chr8 (32-80)||(7805697-7805745)
chr8 (32-72)||(12343146-12343186)
chr8 (34-82)||(32114471-32114519)
chr8 (32-80)||(44498185-44498233)
chr8 (45-80)||(6899417-6899452)
chr8 (32-78)||(3304278-3304324)
chr8 (32-78)||(31654697-31654743)
chr8 (21-66)||(24203046-24203091)
[»] chr5 (39 HSPs)
chr5 (1-85)||(37149008-37149092)
chr5 (1-78)||(9395350-9395427)
chr5 (1-81)||(36563591-36563671)
chr5 (1-80)||(582987-583066)
chr5 (1-80)||(20848072-20848151)
chr5 (1-79)||(23359941-23360019)
chr5 (1-79)||(41989460-41989538)
chr5 (1-78)||(11795168-11795245)
chr5 (1-79)||(13033050-13033128)
chr5 (1-79)||(13103023-13103101)
chr5 (1-82)||(17025620-17025701)
chr5 (1-78)||(26350403-26350480)
chr5 (1-82)||(4443956-4444037)
chr5 (1-85)||(37641946-37642031)
chr5 (1-79)||(38361744-38361822)
chr5 (1-54)||(21575970-21576023)
chr5 (1-57)||(6126845-6126901)
chr5 (1-71)||(13539920-13539986)
chr5 (32-86)||(9395434-9395488)
chr5 (32-78)||(23360026-23360072)
chr5 (32-82)||(41989403-41989453)
chr5 (32-85)||(13103108-13103161)
chr5 (32-79)||(17025708-17025755)
chr5 (32-79)||(36563537-36563584)
chr5 (32-78)||(6126908-6126954)
chr5 (34-72)||(11574166-11574204)
chr5 (24-73)||(966224-966273)
chr5 (32-85)||(13033135-13033188)
chr5 (24-79)||(2629620-2629675)
chr5 (32-79)||(11795252-11795299)
chr5 (32-79)||(21576030-21576077)
chr5 (32-79)||(37642038-37642085)
chr5 (32-78)||(37148955-37149001)
chr5 (23-72)||(3549553-3549602)
chr5 (32-73)||(4444044-4444085)
chr5 (22-71)||(27081014-27081063)
chr5 (1-78)||(39290775-39290851)
chr5 (20-64)||(2366352-2366396)
chr5 (34-70)||(36595782-36595818)
[»] chr3 (57 HSPs)
chr3 (1-85)||(4238587-4238671)
chr3 (1-81)||(44785449-44785529)
chr3 (1-84)||(8817439-8817522)
chr3 (1-80)||(22721929-22722008)
chr3 (1-79)||(19557105-19557183)
chr3 (1-79)||(49823434-49823512)
chr3 (1-86)||(2787885-2787970)
chr3 (1-78)||(10297979-10298056)
chr3 (1-80)||(8437423-8437502)
chr3 (1-80)||(21295379-21295458)
chr3 (1-80)||(34080083-34080162)
chr3 (1-80)||(38964390-38964469)
chr3 (1-87)||(17653703-17653789)
chr3 (1-78)||(37508921-37508998)
chr3 (1-78)||(48340397-48340474)
chr3 (1-78)||(51406673-51406750)
chr3 (1-81)||(9111547-9111627)
chr3 (1-80)||(40691049-40691128)
chr3 (1-80)||(42507408-42507487)
chr3 (1-79)||(36095733-36095811)
chr3 (1-79)||(46208029-46208107)
chr3 (1-78)||(35513473-35513550)
chr3 (1-80)||(42170399-42170478)
chr3 (1-73)||(6013389-6013461)
chr3 (1-71)||(33942985-33943055)
chr3 (32-82)||(17653796-17653846)
chr3 (32-79)||(4238678-4238725)
chr3 (32-79)||(37509005-37509052)
chr3 (32-79)||(46208114-46208161)
chr3 (32-78)||(21295326-21295372)
chr3 (32-82)||(40690992-40691042)
chr3 (32-81)||(10298063-10298112)
chr3 (23-72)||(33128212-33128261)
chr3 (32-79)||(49823380-49823427)
chr3 (32-78)||(6013336-6013382)
chr3 (20-78)||(9213588-9213646)
chr3 (32-78)||(19557052-19557098)
chr3 (32-78)||(34080030-34080076)
chr3 (32-78)||(38964476-38964522)
chr3 (32-78)||(48340481-48340527)
chr3 (32-81)||(9027139-9027188)
chr3 (32-73)||(9111499-9111540)
chr3 (17-82)||(9213512-9213577)
chr3 (32-73)||(42507360-42507401)
chr3 (34-79)||(51406759-51406804)
chr3 (32-80)||(8817384-8817432)
chr3 (6-66)||(43323072-43323132)
chr3 (32-79)||(8437509-8437556)
chr3 (6-61)||(8951954-8952009)
chr3 (32-71)||(22722015-22722054)
chr3 (25-68)||(26001141-26001184)
chr3 (28-63)||(29285838-29285873)
chr3 (32-78)||(2787832-2787878)
chr3 (32-78)||(44785396-44785442)
chr3 (10-91)||(2131734-2131815)
chr3 (32-68)||(42170356-42170392)
chr3 (24-80)||(45652067-45652123)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-80)||(12858-12937)
scaffold0482 (32-80)||(12944-12992)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-80)||(23783-23862)
scaffold0204 (32-85)||(23869-23922)
[»] chr6 (37 HSPs)
chr6 (1-80)||(8383022-8383101)
chr6 (1-80)||(33052847-33052926)
chr6 (1-79)||(2830334-2830412)
chr6 (1-79)||(11572198-11572276)
chr6 (1-78)||(6330115-6330192)
chr6 (1-78)||(26602323-26602400)
chr6 (1-80)||(13853646-13853725)
chr6 (1-79)||(8099529-8099607)
chr6 (1-79)||(35031054-35031132)
chr6 (1-79)||(6143553-6143631)
chr6 (1-78)||(9644696-9644773)
chr6 (1-78)||(9650713-9650790)
chr6 (1-80)||(6068564-6068643)
chr6 (1-80)||(8417846-8417925)
chr6 (1-78)||(13043758-13043835)
chr6 (1-62)||(28747187-28747248)
chr6 (5-70)||(6068997-6069062)
chr6 (32-84)||(8099614-8099666)
chr6 (1-48)||(17992018-17992065)
chr6 (22-79)||(3788111-3788168)
chr6 (32-81)||(9644780-9644829)
chr6 (32-81)||(9650797-9650846)
chr6 (1-78)||(22896471-22896539)
chr6 (32-80)||(26602407-26602455)
chr6 (32-79)||(6330199-6330246)
chr6 (32-79)||(11572144-11572191)
chr6 (32-79)||(13853592-13853639)
chr6 (32-78)||(2830419-2830465)
chr6 (21-59)||(6549902-6549940)
chr6 (32-78)||(8382969-8383015)
chr6 (34-79)||(35031000-35031045)
chr6 (1-73)||(14936510-14936582)
chr6 (32-79)||(6068650-6068697)
chr6 (32-78)||(8417793-8417839)
chr6 (32-89)||(33052782-33052840)
chr6 (34-67)||(12473651-12473684)
chr6 (34-78)||(17992074-17992118)
[»] chr4 (55 HSPs)
chr4 (1-80)||(3372119-3372198)
chr4 (1-80)||(47833609-47833688)
chr4 (1-80)||(48336261-48336340)
chr4 (1-78)||(20538739-20538816)
chr4 (1-78)||(24704370-24704447)
chr4 (1-78)||(53337370-53337447)
chr4 (1-80)||(3992974-3993053)
chr4 (1-80)||(42797730-42797809)
chr4 (1-84)||(43900543-43900626)
chr4 (1-79)||(26231576-26231654)
chr4 (1-79)||(33551200-33551278)
chr4 (1-78)||(6121946-6122023)
chr4 (1-78)||(46797725-46797802)
chr4 (4-79)||(3904739-3904814)
chr4 (1-79)||(7579309-7579387)
chr4 (1-79)||(47838670-47838748)
chr4 (1-78)||(52756675-52756752)
chr4 (1-80)||(51894635-51894714)
chr4 (1-79)||(33621795-33621873)
chr4 (5-79)||(40913246-40913320)
chr4 (1-81)||(41469819-41469899)
chr4 (4-78)||(5986876-5986950)
chr4 (1-66)||(3422073-3422137)
chr4 (4-66)||(41615732-41615794)
chr4 (6-79)||(25855082-25855155)
chr4 (4-67)||(29845656-29845719)
chr4 (24-78)||(4780371-4780425)
chr4 (6-72)||(17236845-17236912)
chr4 (32-86)||(40913181-40913235)
chr4 (32-78)||(42797816-42797862)
chr4 (32-80)||(3422144-3422192)
chr4 (32-80)||(41469764-41469812)
chr4 (32-84)||(46797809-46797861)
chr4 (32-80)||(47838615-47838663)
chr4 (24-79)||(24704446-24704501)
chr4 (22-72)||(5986950-5987000)
chr4 (32-78)||(6121893-6121939)
chr4 (32-78)||(47833695-47833741)
chr4 (1-63)||(50430471-50430533)
chr4 (32-78)||(51894582-51894628)
chr4 (34-79)||(3904682-3904727)
chr4 (7-72)||(17344219-17344284)
chr4 (32-85)||(48336347-48336400)
chr4 (34-78)||(20538686-20538730)
chr4 (32-80)||(33621880-33621928)
chr4 (32-79)||(3993060-3993107)
chr4 (32-83)||(44900075-44900126)
chr4 (32-79)||(53337454-53337501)
chr4 (32-78)||(3372205-3372251)
chr4 (32-78)||(7579394-7579440)
chr4 (32-78)||(43900633-43900679)
chr4 (10-67)||(6924746-6924802)
chr4 (22-71)||(41615683-41615732)
chr4 (24-64)||(32822285-32822325)
chr4 (53-81)||(47866032-47866060)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-82)||(49501-49579)
scaffold0009 (22-78)||(49579-49635)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-79)||(1334-1412)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-78)||(6184-6261)
scaffold0464 (32-80)||(6129-6177)
[»] scaffold0415 (1 HSPs)
scaffold0415 (4-67)||(13782-13845)
[»] scaffold0011 (2 HSPs)
scaffold0011 (3-78)||(231358-231433)
scaffold0011 (32-81)||(231300-231349)
[»] scaffold0650 (1 HSPs)
scaffold0650 (6-79)||(43-115)
[»] scaffold0171 (1 HSPs)
scaffold0171 (32-73)||(12437-12478)


Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 79 - 329
Target Start/End: Original strand, 32887321 - 32887571
Alignment:
Q  79 ttttttaacgggaccgatggaggatgggagttgtggactttcagctgtgatcagagatgaaaatggttctgttttagcagctaaaacctttcaaaaactg 178  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32887321 ttttttaacgggaccaatggaggatgggagttgtggactttcagctgtgatcagagatgaaaatggttctgttttagcagctagaacctttcaaaaactg 32887420  T
Q  179 agccaagacacaattcagacctaccagttggtttggagtttgcatgggatatgctttttctaaacttattcgtggagtcacattcgatatacgtaattac 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  32887421 agccaagacacaattcagacctaccagttggtttggagtttgcatgggatatgctttttctaaacttattcgtagagtcacattcgatatacgtaattgc 32887520  T
Q  279 agccatagtggatcaacaacaaaatcactcttatttgaatggcatcgttca 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32887521 agccatagtggatcaacaacaaaatcactcttatttgaatggcatcgttca 32887571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26471118 - 26471197
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26471118 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27159411 - 27159490
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27159411 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44668146 - 44668225
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44668146 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9981724 - 9981646
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981724 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31842848 - 31842925
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842848 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39402019 - 39402096
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39402019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47216752 - 47216829
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47216752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11796010 - 11795930
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11796010 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14984914 - 14984834
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14984914 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtattt 14984834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44955259 - 44955342
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  44955259 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtaattttt 44955342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34042773 - 34042695
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34042773 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1050965 - 1050888
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1050965 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23278054 - 23278131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23278054 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47777534 - 47777611
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47777534 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 12483684 - 12483760
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12483684 tagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 47588390 - 47588469
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  47588390 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagtatt 47588469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47969772 - 47969700
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc-ttataaataggaccggag 72  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  47969772 atctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17556830 - 17556751
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattca-cttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| |||| |||||    
T  17556830 atctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 25694396 - 25694317
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| | |||| ||||||    
T  25694396 atctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaataggatcagagggagtatt 25694317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 11897126 - 11897053
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  11897126 gttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16448161 - 16448239
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||| ||| ||||||||||||| ||||||  ||||||||||||| || ||||||||||||||||||||||||| |||||    
T  16448161 atctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 11897138 - 11897187
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagtattt 11897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 12213530 - 12213605
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||| || ||||||||| | ||||||||||||||  |||||||||||||| ||| ||||| |||||    
T  12213530 tagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 37552217 - 37552272
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||| || |||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 12483684 - 12483626
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 1050972 - 1051025
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  1050972 actttagttgacccaaaattctcttataaataggaccggagggagtatttttta 1051025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37552218 - 37552141
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||||||||||||||||| ||||||  ||| ||||||||  || ||| ||||||||||||||||||||| ||||    
T  37552218 atctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 14984921 - 14984969
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17556837 - 17556884
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||||    
T  17556837 acttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 25694403 - 25694450
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  25694403 acttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 11796017 - 11796063
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11796017 acttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 27159404 - 27159358
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  27159404 acttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31842841 - 31842795
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31842841 acttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 39402012 - 39401966
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39402012 acttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44668139 - 44668093
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44668139 acttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 47777527 - 47777481
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47777527 acttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 9981731 - 9981772
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9981731 acttttgttgacccaaaattctcttataaataggaccggagg 9981772  T

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Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11989853 - 11989796
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||||||||||||| |||   ||||||||||| || |||||||||||||||    
T  11989853 gttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

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Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 34042780 - 34042829
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

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Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 9302041 - 9302072
Alignment:
Q  51 tctcttataaataggaccggaggtagtatttt 82  Q
    ||||||||||||||||||||||||||||||||    
T  9302041 tctcttataaataggaccggaggtagtatttt 9302072  T

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Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 47216745 - 47216698
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  47216745 acttttgttgacccaaaattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 26471111 - 26471065
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  26471111 acttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 47678371 - 47678405
Alignment:
Q  45 taaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||| |||||||||||||||||||||||||||    
T  47678371 taaatttttcttataaataggaccggaggtagtat 47678405  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 5392218 - 5392267
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 69  Q
    ||||||||||  |||||| ||||||||||||||||||||| || ||||||    
T  5392218 ccaaatacatcaacttttattgacctaaatttctcttatatattggaccg 5392267  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 39720779 - 39720816
Alignment:
Q  42 acctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||| | |||||||||||||||||||||||||||||    
T  39720779 acctaattgtctcttataaataggaccggaggtagtat 39720816  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 12062635 - 12062679
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||| | |||||||||  ||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 19391948 - 19392004
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||| ||||||||| ||  || ||||||||||| ||||||| ||||||||||    
T  19391948 aaatacattaacttttgttcactcaactttctcttatatataggactggaggtagta 19392004  T

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Target: chr2 (Bit Score: 84; Significance: 7e-40; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 41478692 - 41478775
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41478692 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 41478775  T

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Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37990066 - 37990145
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37990066 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

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Target: chr2; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3055635 - 3055557
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3055635 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 3055557  T

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Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4683985 - 4684063
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4683985 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 15896919 - 15896841
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15896919 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44397624 - 44397546
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44397624 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44398763 - 44398685
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44398763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13197763 - 13197840
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13197763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16044370 - 16044447
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16044370 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37666663 - 37666740
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37666663 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13344561 - 13344481
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13344561 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16243836 - 16243914
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  16243836 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38917575 - 38917653
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  38917575 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6648572 - 6648649
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6648572 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 9047808 - 9047892
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||    
T  9047808 atctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagtatgtttta 9047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15372303 - 15372219
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  15372303 atctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagtattattta 15372219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12337990 - 12338073
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 84  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  12337990 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagtacttttt 12338073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30099235 - 30099310
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtag 76  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  30099235 atctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41492949 - 41493015
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41492949 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 12170455 - 12170529
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||| |||||| ||||    
T  12170455 tagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31150730 - 31150659
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||| |||||||||||||  ||||||||||||  || |||||||||||||||||| |||||    
T  31150730 atctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44804631 - 44804680
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 50  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804631 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41492942 - 41492894
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 37990059 - 37990009
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagtatttt 37990009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 3055642 - 3055691
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 3055691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 6648565 - 6648517
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9047801 - 9047753
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41478685 - 41478637
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 38917568 - 38917521
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  38917568 acttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 44398770 - 44398817
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  44398770 acttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 12337983 - 12337937
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12337983 acttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 13197756 - 13197710
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13197756 acttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||  ||||||||||||||| || |||||| |||||||||||||||| ||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 15372310 - 15372356
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15372310 acttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 15896926 - 15896972
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15896926 acttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 16243829 - 16243776
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||||||||||| ||| |||||||||||||||||||||| | |||||| ||||    
T  16243829 acttttgttgacccaaaattctcttataaataggaccggatggagtattattta 16243776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 16734855 - 16734802
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 59  Q
    ||||||||||||||||| ||||||  ||||||||||||| || |||||||||||    
T  16734855 gttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 41453131 - 41453090
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaa 47  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  41453131 gttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 23227344 - 23227404
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||  ||||||||||||| |||| ||||||||||||||||| | ||| ||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 37666656 - 37666608
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  37666656 actttagttgacccaaaattctcttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 13344568 - 13344615
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  13344568 acttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 30099228 - 30099181
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  30099228 acttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 44397631 - 44397678
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||| || |||||    
T  44397631 acttttgttgacccaaaattctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 16044363 - 16044317
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  16044363 actttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 30852682 - 30852748
Alignment:
Q  13 attcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| |||||    
T  30852682 attcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 44804624 - 44804583
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  44804624 acttttgttaacttaaaattctcttataaataggaccggagg 44804583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 10069283 - 10069339
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||| |||||||||||||||||| | ||||| |||||| ||| |||| ||||||    
T  10069283 atacattaacttttgttgacctaaatatttcttaaaaatagtaccagaggaagtatt 10069339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 36089489 - 36089457
Alignment:
Q  32 acttttgttgacctaaatttctcttataaatag 64  Q
    |||||||||||||||||| ||||||||||||||    
T  36089489 acttttgttgacctaaatatctcttataaatag 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 46840937 - 46840852
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaa 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46840937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttgttaa 46840852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1565782 - 1565862
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565782 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1738500 - 1738579
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738500 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7240826 - 7240747
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7240826 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38063966 - 38064044
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38063966 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23314192 - 23314269
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23314192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31319452 - 31319529
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319452 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36583472 - 36583388
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36583472 atctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtacttttta 36583388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9268833 - 9268754
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9268833 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7482302 - 7482224
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7482302 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28536804 - 28536882
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28536804 atctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22285776 - 22285697
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22285776 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 94371 - 94448
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  94371 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36016249 - 36016326
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36016249 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38441537 - 38441460
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38441537 atctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4790325 - 4790242
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 84  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  4790325 atctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagtatctttt 4790242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33418453 - 33418392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33418453 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9575486 - 9575406
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    |||||||||||||||||||| |||||| || ||||||||||||| || ||||||||| |||||||||| |||| |||||||    
T  9575486 atctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagtattt 9575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 40840175 - 40840243
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||| | ||||||| || ||| |||||||| |||||||||||||||    
T  40840175 tagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 1738493 - 1738445
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7240833 - 7240881
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7482309 - 7482357
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 9268840 - 9268887
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  9268840 acttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 22285783 - 22285829
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  22285783 acttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 23314185 - 23314139
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314185 acttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 38441544 - 38441590
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38441544 acttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 46840944 - 46840990
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46840944 acttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 33418460 - 33418500
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  33418460 acttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 36583479 - 36583527
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 38063959 - 38063911
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||||||    
T  38063959 acttttgttgacccaaaattctcttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 4790332 - 4790379
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  4790332 acttttattgacccaaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 40840165 - 40840126
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  40840165 acttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 46877666 - 46877713
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||| ||||||||||||| || ||||||||||| |||||||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccgga 46877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 94364 - 94318
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  94364 acttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31319445 - 31319399
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  31319445 acttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7269458 - 7269535
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||||||||||||||  | ||||||  | ||||||||||| || ||| ||||||||||| ||||||||| ||||    
T  7269458 atctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 3411449 - 3411489
Alignment:
Q  46 aaatttctcttataaataggaccggaggtagtattttttaa 86  Q
    ||||||||||||||||||||| |||||| |||||| |||||    
T  3411449 aaatttctcttataaataggatcggagggagtattatttaa 3411489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 7107750 - 7107782
Alignment:
Q  49 tttctcttataaataggaccggaggtagtattt 81  Q
    |||||||| ||||||||||||||||||||||||    
T  7107750 tttctcttgtaaataggaccggaggtagtattt 7107782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 9575495 - 9575539
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||    
T  9575495 ttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 36016242 - 36016206
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  36016242 acttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 54665 - 54749
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54665 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattta 54749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2890215 - 2890294
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2890215 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7785831 - 7785910
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7785831 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7805752 - 7805831
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43199407 - 43199485
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43199407 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3304331 - 3304408
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3304331 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6552732 - 6552655
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552732 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12343193 - 12343270
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12343193 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32114528 - 32114605
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32114528 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44498240 - 44498317
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44498240 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12763707 - 12763785
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12763707 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25601053 - 25601131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25601053 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32211416 - 32211494
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32211416 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15888405 - 15888482
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15888405 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31654690 - 31654613
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31654690 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39571256 - 39571333
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39571256 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33289314 - 33289393
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  33289314 atctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 4245649 - 4245719
Alignment:
Q  16 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaa 4245719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7012248 - 7012171
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7012248 atctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13578934 - 13578856
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  13578934 atctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28463688 - 28463614
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggta 75  Q
    |||| ||| ||||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||    
T  28463688 atctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8587247 - 8587170
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  8587247 atctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 27422266 - 27422327
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||||| ||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtattattta 27422327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 25601054 - 25600999
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 39571249 - 39571200
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 39571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 7785824 - 7785776
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 54658 - 54611
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  54658 acttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 2890208 - 2890161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  2890208 acttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 24692040 - 24692111
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    |||||||||| || ||||||  |||||||||||||||| ||| |||||||||||||| || ||| |||||||    
T  24692040 aaaattcagttcagatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtattt 24692111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 32211407 - 32211360
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  32211407 ttttgttgacccaaaattctcttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 43199400 - 43199353
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  43199400 acttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6552739 - 6552785
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6552739 acttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 7012255 - 7012305
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  7012255 acttttgttgatccaaaattctcttataaataggaccggaggaagtatttt 7012305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 12763700 - 12763650
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||||    
T  12763700 acttttgttgacccaaaattatcttataaataggaccggagggagtatttt 12763650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 15888398 - 15888344
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaa 86  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||||||||    
T  15888398 acttttgttgacccaaaattctcttataaatagaactggagggagtattttttaa 15888344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 17006982 - 17006916
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17006982 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17570265 - 17570331
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17570265 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 33289307 - 33289261
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  33289307 acttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 7805745 - 7805697
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||||    
T  7805745 acttttgctgacccaaaattctcttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 12343186 - 12343146
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  12343186 acttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 32114519 - 32114471
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||||||    
T  32114519 ttttgttgacccaaaattttcttataaataggaccggagggagtatttt 32114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 44498233 - 44498185
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  44498233 acttttattgacccaaaattctcttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 6899452 - 6899417
Alignment:
Q  45 taaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||| ||||||||||||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagtatt 6899417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 3304324 - 3304278
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  3304324 acttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 31654697 - 31654743
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31654697 acttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 24203046 - 24203091
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||| || ||||||| ||||| ||||||||||||||||||||||    
T  24203046 caaatatatccacttttattgacataaatttctcttataaatagga 24203091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 37149008 - 37149092
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37149008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattta 37149092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9395427 - 9395350
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9395427 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36563591 - 36563671
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36563591 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 583066 - 582987
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  583066 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20848151 - 20848072
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20848151 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23360019 - 23359941
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23360019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41989460 - 41989538
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41989460 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11795245 - 11795168
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11795245 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13033128 - 13033050
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13033128 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13103101 - 13103023
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13103101 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17025701 - 17025620
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17025701 atctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagtatttt 17025620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26350403 - 26350480
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26350403 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4444037 - 4443956
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  4444037 atctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtatttt 4443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37642031 - 37641946
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  37642031 atctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagtattattta 37641946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38361744 - 38361822
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||||    
T  38361744 atctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21576023 - 21575970
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576023 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6126901 - 6126845
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 57  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126901 atctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13539920 - 13539986
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||||||||||||    
T  13539920 atctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 9395434 - 9395488
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaa 86  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||| |||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagtattatttaa 9395488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 41989453 - 41989403
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagtatttt 41989403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 13103108 - 13103161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||| ||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagtattattta 13103161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17025708 - 17025755
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  17025708 acttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 36563584 - 36563537
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  36563584 acttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6126908 - 6126954
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6126908 acttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 11574166 - 11574204
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggag 11574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 13033135 - 13033188
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| |||||| ||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagtattattta 13033188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 2629620 - 2629675
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||| |||||||||||||||||| | ||||||||| | ||||||||| |||||    
T  2629620 atacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagtat 2629675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 11795252 - 11795299
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||| ||||| |||||    
T  11795252 acttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 21576030 - 21576077
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  21576030 acttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 37642038 - 37642085
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  37642038 acttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 37149001 - 37148955
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  37149001 acttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 3549602 - 3549553
Alignment:
Q  23 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||  ||||||||| |  ||||||||||||||||||||||||||||    
T  3549602 aatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 4444044 - 4444085
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||||| ||||| |||||||||||||| |||||||||    
T  4444044 acttttgttgatctaaaattctcttataaataagaccggagg 4444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 27081014 - 27081063
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||  |||||||||||||||||| |||||| ||||||||| ||||    
T  27081014 aaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39290851 - 39290775
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| ||||||||| | |||||||||||  | |||||||||||| |  ||||||||| |||||||||||||| ||||    
T  39290851 atctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaatag 64  Q
    ||||||||||  ||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 36595818 - 36595782
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccgg 70  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  36595818 ttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4238671 - 4238587
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4238671 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattta 4238587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44785449 - 44785529
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44785449 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8817439 - 8817522
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8817439 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatttttt 8817522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22722008 - 22721929
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22722008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19557105 - 19557183
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19557105 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49823434 - 49823512
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823434 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2787885 - 2787970
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  2787885 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtattatttaa 2787970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10298056 - 10297979
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298056 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8437502 - 8437423
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8437502 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21295379 - 21295458
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21295379 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34080083 - 34080162
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34080083 atcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 38964469 - 38964390
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38964469 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17653789 - 17653703
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaac 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  17653789 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtaccttttaac 17653703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37508998 - 37508921
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37508998 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48340474 - 48340397
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48340474 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51406750 - 51406673
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51406750 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9111547 - 9111627
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9111547 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattt 9111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40691049 - 40691128
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  40691049 atctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagtatt 40691128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42507408 - 42507487
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42507408 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36095733 - 36095811
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  36095733 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46208107 - 46208029
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46208107 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35513550 - 35513473
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35513550 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42170399 - 42170478
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42170399 atctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6013389 - 6013461
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  6013389 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33942985 - 33943055
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  33942985 atctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 17653796 - 17653846
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtatttt 17653846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 4238678 - 4238725
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 37509005 - 37509052
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 46208114 - 46208161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 40691042 - 40690992
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagtatttt 40690992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 10298063 - 10298112
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  23 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 49823427 - 49823380
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  49823427 acttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 6013382 - 6013336
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 9213588 - 9213646
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||  | |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 19557098 - 19557052
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  19557098 acttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 34080076 - 34080030
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  34080076 acttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 38964476 - 38964522
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38964476 acttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 48340481 - 48340527
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  48340481 acttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 9027188 - 9027139
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||| || ||| ||||||||||||||||||||| |||||||    
T  9027188 acttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 9111540 - 9111499
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9111540 acttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 9213577 - 9213512
Alignment:
Q  17 agtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    |||||| ||||||  ||||||||||||  |||| ||| ||||||||||||||||||| ||||||||    
T  9213577 agtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagtatttt 9213512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 42507401 - 42507360
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  42507401 acttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 51406759 - 51406804
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  51406759 ttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 8817432 - 8817384
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  8817432 acttttgttgacccaaaattctcttataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 43323132 - 43323072
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||| | |||||||||||  ||||||||||||| || ||| ||||||||||||||    
T  43323132 gttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 8437509 - 8437556
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  8437509 acttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 8951954 - 8952009
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 61  Q
    ||||||||||||||||||||||||| |||||||| ||   || |||||||||||||    
T  8951954 gttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 22722015 - 22722054
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  22722015 acttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 26001141 - 26001184
Alignment:
Q  25 tacattcacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacc 26001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 29285838 - 29285873
Alignment:
Q  28 attcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||||||||||||||| |||||||||||    
T  29285838 attcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 2787878 - 2787832
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  2787878 acttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44785442 - 44785396
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  44785442 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 2131734 - 2131815
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaacggga 91  Q
    |||||| || ||| ||||||  ||||||||||||| |||| ||||| |||| |||||||||||| |||| || |||| ||||    
T  2131734 aaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagtaattgttaatggga 2131815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 42170392 - 42170356
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  42170392 acttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 45652123 - 45652067
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||| || ||||||||||  |||| ||||||||||||||||| ||||| ||||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12937 - 12858
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 12944 - 12992
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||||    
T  12944 acttttgctgacccaaaattctcttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23862 - 23783
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23862 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 23869 - 23922
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||| ||||    
T  23869 acttttgttgacccaaaattttcttataaataggaccggagggagtattattta 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8383022 - 8383101
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8383022 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33052847 - 33052926
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33052847 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2830412 - 2830334
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2830412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11572198 - 11572276
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11572198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6330192 - 6330115
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26602400 - 26602323
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26602400 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13853646 - 13853725
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13853646 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8099607 - 8099529
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8099607 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35031054 - 35031132
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35031054 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6143631 - 6143553
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6143631 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9644773 - 9644696
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9644773 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9650790 - 9650713
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9650790 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6068643 - 6068564
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  6068643 atctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8417846 - 8417925
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||    
T  8417846 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13043835 - 13043758
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13043835 atctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28747187 - 28747248
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28747187 atctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 6068997 - 6069062
Alignment:
Q  5 agttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  6068997 agttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 8099614 - 8099666
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 84  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagtatttttt 8099666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17992065 - 17992018
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaa 48  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  17992065 atctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 3788111 - 3788168
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||  |||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 9644780 - 9644829
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 9650797 - 9650846
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22896539 - 22896471
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||||| ||||    
T  22896539 atctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 26602407 - 26602455
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 6330199 - 6330246
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  6330199 acttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 11572191 - 11572144
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  11572191 acttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 13853639 - 13853592
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13853639 acttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 2830419 - 2830465
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2830419 acttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttata 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 8383015 - 8382969
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  8383015 acttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 35031045 - 35031000
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  35031045 ttttgttgacccaaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14936510 - 14936582
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||| ||||   |||||||||||  ||| ||||||||| |||| |||||||||||||||||| ||||    
T  14936510 atctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 6068650 - 6068697
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  6068650 acttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 8417839 - 8417793
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  8417839 acttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 33052840 - 33052782
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt-tttaacgg 89  Q
    |||||| |||||| ||| |||||||||||||||||||||| | ||||||| ||||||||    
T  33052840 acttttattgacccaaaattctcttataaataggaccggatggagtatttgtttaacgg 33052782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 12473684 - 12473651
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggac 67  Q
    |||| |||||||||||||||||||||||||||||    
T  12473684 ttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 17992074 - 17992118
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  17992074 ttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3372198 - 3372119
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47833688 - 47833609
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47833688 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48336340 - 48336261
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48336340 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20538739 - 20538816
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20538739 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24704447 - 24704370
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24704447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53337447 - 53337370
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53337447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3993053 - 3992974
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3993053 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42797809 - 42797730
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42797809 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43900626 - 43900543
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 84  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43900626 atctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagtatttttt 43900543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26231654 - 26231576
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26231654 atctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33551278 - 33551200
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33551278 atctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6121946 - 6122023
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6121946 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46797802 - 46797725
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46797802 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 3904739 - 3904814
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3904739 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7579387 - 7579309
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7579387 atctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47838670 - 47838748
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  47838670 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 52756752 - 52756675
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  52756752 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 51894635 - 51894714
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51894635 atctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtatt 51894714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33621873 - 33621795
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  33621873 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagtat 33621795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 40913246 - 40913320
Alignment:
Q  5 agttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  40913246 agttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41469819 - 41469899
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  41469819 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 5986950 - 5986876
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  5986950 tagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3422137 - 3422073
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3422137 atctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 41615732 - 41615794
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  41615732 tagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 25855155 - 25855082
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||| |||||||||||| |||| |||||    
T  25855155 gttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 29845719 - 29845656
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  29845719 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 17236845 - 17236912
Alignment:
Q  6 gttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||| ||| |||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 40913235 - 40913181
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattttttaa 86  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagggagttttttttaa 40913181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 3422144 - 3422192
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41469812 - 41469764
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 46797809 - 46797861
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttt 84  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| |||||    
T  46797809 acttttgttgacccaaaattctcttataaataggaccggagggagtacttttt 46797861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 47838663 - 47838615
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 24704446 - 24704501
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| |||||| |||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 5986950 - 5987000
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 5987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 6121939 - 6121893
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6121939 acttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 47833695 - 47833741
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47833695 acttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50430471 - 50430533
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||| |||||||||||| |||||||||||  ||||||||||||| || || ||||||||||||    
T  50430471 atctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

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Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 51894628 - 51894582
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51894628 acttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

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Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 3904727 - 3904682
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  3904727 ttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

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Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 17344284 - 17344219
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| || ||||||  |||||||||||  ||| |||||||||||||||| |||||||    
T  17344284 ttaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T

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Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 48336347 - 48336400
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatttttta 85  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||| ||||    
T  48336347 acttttgttgacccaaaattttcttataaataggaccggagggagtattattta 48336400  T

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Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

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Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 33621880 - 33621928
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  33621880 acttttgttgacccaaaattatcttataaataggaccggagggagtatt 33621928  T

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Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 3993060 - 3993107
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  3993060 acttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 44900126 - 44900075
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattttt 83  Q
    |||||||||||||  ||| ||||||||||||||||||||||| |||| ||||    
T  44900126 acttttgttgaccagaatatctcttataaataggaccggagggagtagtttt 44900075  T

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Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 53337454 - 53337501
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  53337454 acttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 3372205 - 3372251
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  3372205 acttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

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Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 7579394 - 7579440
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  7579394 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 43900633 - 43900679
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  43900633 acttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 6924746 - 6924802
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||| || ||||||||||| |||||||||||||||| ||| ||||||| |||||||    
T  6924746 aaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggac 6924802  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 41615732 - 41615683
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||  ||||||||||| | || |||||||||||||||||||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaatag 64  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 47866060 - 47866032
Alignment:
Q  53 tcttataaataggaccggaggtagtattt 81  Q
    |||||||||||||||||||||||||||||    
T  47866060 tcttataaataggaccggaggtagtattt 47866032  T

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Target: scaffold0009 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 49579 - 49501
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49579 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 49501  T

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Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

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Target: scaffold1707 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1412 - 1334
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagtat 1334  T

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Target: scaffold0464 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6184 - 6261
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6184 atctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

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Target: scaffold0464; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 6177 - 6129
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  6177 acttttgttgacccaaaattttcttataaataggaccggagggagtatt 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 13782 - 13845
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  13782 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 231358 - 231433
Alignment:
Q  3 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||| ||||| |||||| ||||    
T  231358 ctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 231349 - 231300
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 81  Q
    ||||||||||||||||  ||||| |||||||||||||||||| |||||||    
T  231349 acttttgttgacctaatattctcctataaataggaccggagggagtattt 231300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 43 - 115
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||| |||||||||||||  ||||||||||||| |  |||||| ||||||||| |||||||| |||||    
T  43 gttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 12437 - 12478
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||| |||||| |||| |||||||||||||||||||||||    
T  12437 actttttttgaccaaaatatctcttataaataggaccggagg 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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