View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13692_low_25 (Length: 215)

Name: NF13692_low_25
Description: NF13692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13692_low_25
NF13692_low_25
[»] chr1 (48 HSPs)
chr1 (80-187)||(32887211-32887318)
chr1 (1-87)||(26471118-26471204)
chr1 (1-80)||(27159411-27159490)
chr1 (1-80)||(44668146-44668225)
chr1 (1-79)||(9981646-9981724)
chr1 (1-83)||(11795928-11796010)
chr1 (1-78)||(31842848-31842925)
chr1 (1-78)||(39402019-39402096)
chr1 (1-78)||(47216752-47216829)
chr1 (1-81)||(14984834-14984914)
chr1 (1-79)||(34042695-34042773)
chr1 (1-78)||(1050888-1050965)
chr1 (1-78)||(23278054-23278131)
chr1 (1-78)||(44955259-44955336)
chr1 (1-86)||(47588390-47588475)
chr1 (1-70)||(47777534-47777603)
chr1 (4-80)||(12483684-12483760)
chr1 (1-79)||(17556751-17556830)
chr1 (1-80)||(25694317-25694396)
chr1 (1-78)||(47969694-47969772)
chr1 (6-79)||(11897053-11897126)
chr1 (1-79)||(16448161-16448239)
chr1 (32-81)||(11897138-11897187)
chr1 (4-79)||(12213530-12213605)
chr1 (24-79)||(37552217-37552272)
chr1 (22-80)||(12483626-12483684)
chr1 (1-78)||(37552141-37552218)
chr1 (32-80)||(14984921-14984969)
chr1 (32-79)||(17556837-17556884)
chr1 (32-79)||(25694403-25694450)
chr1 (32-78)||(11796017-11796063)
chr1 (32-78)||(27159358-27159404)
chr1 (32-78)||(31842795-31842841)
chr1 (32-78)||(39401966-39402012)
chr1 (32-78)||(44668093-44668139)
chr1 (32-78)||(47777481-47777527)
chr1 (32-81)||(1050972-1051021)
chr1 (32-81)||(34042780-34042829)
chr1 (32-80)||(9981731-9981779)
chr1 (32-72)||(44955212-44955252)
chr1 (32-79)||(47216698-47216745)
chr1 (32-78)||(26471065-26471111)
chr1 (6-63)||(11989796-11989853)
chr1 (20-80)||(5392218-5392278)
chr1 (20-78)||(11989853-11989911)
chr1 (24-68)||(12062635-12062679)
chr1 (32-80)||(47588335-47588383)
chr1 (32-80)||(47969779-47969827)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-86)||(12852-12937)
scaffold0482 (32-80)||(12944-12992)
[»] chr8 (52 HSPs)
chr8 (1-86)||(7785831-7785916)
chr8 (1-86)||(7805752-7805837)
chr8 (1-78)||(31654613-31654690)
chr8 (1-80)||(54665-54744)
chr8 (1-80)||(2890215-2890294)
chr8 (1-79)||(43199407-43199485)
chr8 (1-78)||(3304331-3304408)
chr8 (1-78)||(6552655-6552732)
chr8 (1-78)||(12343193-12343270)
chr8 (1-78)||(32114528-32114605)
chr8 (1-78)||(44498240-44498317)
chr8 (1-79)||(12763707-12763785)
chr8 (1-79)||(25601053-25601131)
chr8 (1-79)||(32211416-32211494)
chr8 (1-78)||(15888405-15888482)
chr8 (1-78)||(39571256-39571333)
chr8 (1-80)||(33289314-33289393)
chr8 (1-78)||(7012171-7012248)
chr8 (16-81)||(4245649-4245714)
chr8 (1-79)||(13578856-13578934)
chr8 (1-78)||(8587170-8587247)
chr8 (1-73)||(28463616-28463688)
chr8 (24-80)||(27422266-27422322)
chr8 (24-79)||(25600999-25601054)
chr8 (34-83)||(32211358-32211407)
chr8 (32-81)||(39571200-39571249)
chr8 (32-80)||(7785776-7785824)
chr8 (10-86)||(24692040-24692116)
chr8 (32-79)||(54611-54658)
chr8 (32-79)||(2890161-2890208)
chr8 (32-79)||(43199353-43199400)
chr8 (32-78)||(6552739-6552785)
chr8 (32-78)||(33289261-33289307)
chr8 (32-81)||(12763651-12763700)
chr8 (32-80)||(7805697-7805745)
chr8 (7-75)||(17006914-17006982)
chr8 (7-75)||(17570265-17570333)
chr8 (32-80)||(44498185-44498233)
chr8 (34-81)||(32114472-32114519)
chr8 (32-78)||(3304278-3304324)
chr8 (21-71)||(13246801-13246851)
chr8 (32-81)||(7012255-7012304)
chr8 (32-81)||(15888349-15888398)
chr8 (32-72)||(12343146-12343186)
chr8 (32-78)||(31654697-31654743)
chr8 (34-80)||(33057592-33057638)
chr8 (21-66)||(24203046-24203091)
chr8 (20-77)||(30171483-30171540)
chr8 (34-79)||(33057680-33057725)
chr8 (46-78)||(34157778-34157810)
chr8 (32-80)||(40355249-40355297)
chr8 (51-79)||(41915592-41915620)
[»] chr7 (46 HSPs)
chr7 (1-82)||(1565782-1565863)
chr7 (1-81)||(46840857-46840937)
chr7 (1-80)||(1738500-1738579)
chr7 (1-80)||(7240747-7240826)
chr7 (1-80)||(22285697-22285776)
chr7 (1-79)||(38063966-38064044)
chr7 (1-78)||(23314192-23314269)
chr7 (1-78)||(31319452-31319529)
chr7 (1-78)||(36016249-36016326)
chr7 (1-80)||(9268754-9268833)
chr7 (1-79)||(7482224-7482302)
chr7 (1-79)||(28536804-28536882)
chr7 (1-78)||(36583395-36583472)
chr7 (1-72)||(94371-94442)
chr7 (1-78)||(38441460-38441537)
chr7 (1-79)||(4790247-4790325)
chr7 (1-83)||(9575404-9575486)
chr7 (1-62)||(33418392-33418453)
chr7 (4-78)||(40840175-40840249)
chr7 (32-80)||(1738445-1738493)
chr7 (32-80)||(7240833-7240881)
chr7 (32-80)||(7482309-7482357)
chr7 (32-79)||(9268840-9268887)
chr7 (32-78)||(22285783-22285829)
chr7 (32-78)||(23314139-23314185)
chr7 (32-78)||(46840944-46840990)
chr7 (32-80)||(36583479-36583527)
chr7 (32-80)||(38063911-38063959)
chr7 (32-78)||(94318-94364)
chr7 (32-78)||(31319399-31319445)
chr7 (32-78)||(38441544-38441590)
chr7 (1-78)||(7269458-7269535)
chr7 (24-77)||(46877666-46877719)
chr7 (34-78)||(9575495-9575539)
chr7 (32-72)||(33418460-33418500)
chr7 (32-79)||(1565728-1565775)
chr7 (32-79)||(4790332-4790379)
chr7 (32-79)||(7661075-7661122)
chr7 (32-79)||(7661160-7661207)
chr7 (24-79)||(28469480-28469535)
chr7 (32-79)||(28536750-28536797)
chr7 (32-71)||(40840126-40840165)
chr7 (46-80)||(3411449-3411483)
chr7 (49-79)||(5347721-5347751)
chr7 (32-78)||(36016196-36016242)
chr7 (53-81)||(28677313-28677341)
[»] chr3 (63 HSPs)
chr3 (1-78)||(17653712-17653789)
chr3 (1-78)||(37508921-37508998)
chr3 (1-82)||(44785449-44785530)
chr3 (1-80)||(4238592-4238671)
chr3 (1-80)||(22721929-22722008)
chr3 (1-79)||(19557105-19557183)
chr3 (1-79)||(36095733-36095811)
chr3 (1-79)||(46208029-46208107)
chr3 (1-79)||(49823434-49823512)
chr3 (1-78)||(10297979-10298056)
chr3 (1-78)||(35513473-35513550)
chr3 (1-81)||(8817439-8817519)
chr3 (1-72)||(2787885-2787956)
chr3 (1-80)||(8437423-8437502)
chr3 (1-80)||(21295379-21295458)
chr3 (1-80)||(34080083-34080162)
chr3 (1-80)||(38964390-38964469)
chr3 (1-78)||(48340397-48340474)
chr3 (1-78)||(51406673-51406750)
chr3 (1-81)||(9111547-9111627)
chr3 (1-72)||(40691049-40691120)
chr3 (1-80)||(42507408-42507487)
chr3 (1-75)||(6013389-6013463)
chr3 (1-80)||(42170399-42170478)
chr3 (1-79)||(33942985-33943063)
chr3 (32-79)||(46208114-46208161)
chr3 (32-82)||(10298063-10298113)
chr3 (32-78)||(21295326-21295372)
chr3 (32-81)||(40690993-40691042)
chr3 (23-79)||(33128205-33128261)
chr3 (32-79)||(49823380-49823427)
chr3 (32-78)||(6013336-6013382)
chr3 (20-78)||(9213588-9213646)
chr3 (32-78)||(19557052-19557098)
chr3 (32-78)||(34080030-34080076)
chr3 (32-78)||(38964476-38964522)
chr3 (32-78)||(48340481-48340527)
chr3 (32-81)||(9027139-9027188)
chr3 (32-81)||(17653796-17653845)
chr3 (34-79)||(51406759-51406804)
chr3 (32-80)||(8817384-8817432)
chr3 (17-81)||(9213513-9213577)
chr3 (32-79)||(4238678-4238725)
chr3 (32-79)||(8437509-8437556)
chr3 (32-75)||(9111497-9111540)
chr3 (32-79)||(22722015-22722062)
chr3 (32-79)||(37509005-37509052)
chr3 (32-75)||(42507358-42507401)
chr3 (32-78)||(2787832-2787878)
chr3 (10-78)||(2131734-2131802)
chr3 (6-66)||(43323072-43323132)
chr3 (24-80)||(45652067-45652123)
chr3 (6-61)||(8951954-8952009)
chr3 (25-68)||(26001141-26001184)
chr3 (28-63)||(29285838-29285873)
chr3 (32-79)||(34988074-34988121)
chr3 (20-78)||(5323279-5323337)
chr3 (32-78)||(42170346-42170392)
chr3 (32-78)||(44785396-44785442)
chr3 (32-81)||(26019477-26019526)
chr3 (11-80)||(42299628-42299697)
chr3 (46-78)||(21653343-21653375)
chr3 (51-79)||(40215022-40215050)
[»] chr4 (59 HSPs)
chr4 (1-81)||(43900546-43900626)
chr4 (1-80)||(3372119-3372198)
chr4 (1-80)||(47833609-47833688)
chr4 (1-80)||(48336261-48336340)
chr4 (1-78)||(20538739-20538816)
chr4 (1-78)||(24704370-24704447)
chr4 (1-78)||(53337370-53337447)
chr4 (1-80)||(3992974-3993053)
chr4 (1-80)||(42797730-42797809)
chr4 (1-79)||(26231576-26231654)
chr4 (1-79)||(33551200-33551278)
chr4 (5-79)||(40913246-40913320)
chr4 (1-78)||(6121946-6122023)
chr4 (1-78)||(46797725-46797802)
chr4 (4-79)||(3904739-3904814)
chr4 (1-72)||(52756681-52756752)
chr4 (1-79)||(7579309-7579387)
chr4 (1-83)||(41469819-41469901)
chr4 (1-79)||(47838670-47838748)
chr4 (1-69)||(33621805-33621873)
chr4 (1-80)||(51894635-51894714)
chr4 (4-78)||(5986876-5986950)
chr4 (1-66)||(3422073-3422137)
chr4 (4-66)||(41615732-41615794)
chr4 (6-79)||(25855082-25855155)
chr4 (4-79)||(29845644-29845719)
chr4 (24-78)||(4780371-4780425)
chr4 (6-79)||(17236845-17236919)
chr4 (32-78)||(42797816-42797862)
chr4 (32-80)||(3422144-3422192)
chr4 (32-80)||(41469764-41469812)
chr4 (32-80)||(47838615-47838663)
chr4 (24-79)||(24704446-24704501)
chr4 (22-80)||(5986950-5987008)
chr4 (32-78)||(6121893-6121939)
chr4 (32-78)||(46797809-46797855)
chr4 (32-78)||(47833695-47833741)
chr4 (32-78)||(51894582-51894628)
chr4 (34-79)||(3904682-3904727)
chr4 (32-77)||(40913190-40913235)
chr4 (7-79)||(17344212-17344284)
chr4 (34-78)||(20538686-20538730)
chr4 (32-80)||(33621880-33621928)
chr4 (32-80)||(48336347-48336395)
chr4 (32-79)||(3993060-3993107)
chr4 (32-79)||(53337454-53337501)
chr4 (32-78)||(3372205-3372251)
chr4 (32-78)||(44900080-44900126)
chr4 (1-63)||(50430471-50430533)
chr4 (22-78)||(41615676-41615732)
chr4 (32-79)||(52756759-52756806)
chr4 (32-78)||(1716301-1716347)
chr4 (32-78)||(7579394-7579440)
chr4 (32-78)||(43900633-43900679)
chr4 (46-80)||(48361049-48361083)
chr4 (10-67)||(6924746-6924802)
chr4 (32-81)||(17344297-17344346)
chr4 (24-64)||(32822285-32822325)
chr4 (34-78)||(38160372-38160416)
[»] chr2 (55 HSPs)
chr2 (1-81)||(41478692-41478772)
chr2 (1-80)||(37990066-37990145)
chr2 (1-79)||(3055557-3055635)
chr2 (1-79)||(4683985-4684063)
chr2 (1-79)||(15896841-15896919)
chr2 (1-79)||(44397546-44397624)
chr2 (1-79)||(44398685-44398763)
chr2 (1-78)||(13197763-13197840)
chr2 (1-80)||(15372224-15372303)
chr2 (1-78)||(16044370-16044447)
chr2 (1-78)||(37666663-37666740)
chr2 (1-81)||(13344481-13344561)
chr2 (1-72)||(16243836-16243907)
chr2 (1-79)||(38917575-38917653)
chr2 (1-78)||(6648572-6648649)
chr2 (1-72)||(9047808-9047879)
chr2 (1-78)||(12337990-12338067)
chr2 (1-67)||(41492949-41493015)
chr2 (1-73)||(30099235-30099307)
chr2 (4-78)||(12170455-12170529)
chr2 (1-78)||(31150653-31150730)
chr2 (32-80)||(41492894-41492942)
chr2 (32-81)||(3055642-3055691)
chr2 (32-85)||(15896926-15896979)
chr2 (32-81)||(37990010-37990059)
chr2 (1-50)||(44804631-44804680)
chr2 (32-80)||(6648517-6648565)
chr2 (32-80)||(9047753-9047801)
chr2 (32-80)||(41478637-41478685)
chr2 (32-79)||(38917521-38917568)
chr2 (32-79)||(44398770-44398817)
chr2 (32-78)||(12337937-12337983)
chr2 (32-78)||(13197710-13197756)
chr2 (20-78)||(13724102-13724160)
chr2 (32-78)||(15372310-15372356)
chr2 (32-80)||(16243781-16243829)
chr2 (32-80)||(37666608-37666656)
chr2 (32-79)||(13344568-13344615)
chr2 (32-79)||(30099181-30099228)
chr2 (32-79)||(44397631-44397678)
chr2 (32-78)||(16044317-16044363)
chr2 (13-79)||(30852682-30852748)
chr2 (6-59)||(16734802-16734855)
chr2 (6-47)||(41453090-41453131)
chr2 (7-63)||(4553069-4553125)
chr2 (20-80)||(23227344-23227404)
chr2 (49-80)||(13775831-13775862)
chr2 (32-75)||(44804581-44804624)
chr2 (49-79)||(42263468-42263498)
chr2 (34-79)||(23227271-23227316)
chr2 (20-77)||(45294395-45294452)
chr2 (49-81)||(7765790-7765822)
chr2 (24-80)||(10069283-10069339)
chr2 (51-83)||(11711446-11711478)
chr2 (32-64)||(36089457-36089489)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-80)||(23783-23862)
scaffold0204 (32-80)||(23869-23917)
[»] chr6 (43 HSPs)
chr6 (1-80)||(8383022-8383101)
chr6 (1-80)||(33052847-33052926)
chr6 (1-79)||(2830334-2830412)
chr6 (1-79)||(11572198-11572276)
chr6 (1-78)||(6330115-6330192)
chr6 (1-78)||(26602323-26602400)
chr6 (1-80)||(13853646-13853725)
chr6 (1-79)||(8099529-8099607)
chr6 (1-79)||(35031054-35031132)
chr6 (1-80)||(8417846-8417925)
chr6 (1-79)||(6143553-6143631)
chr6 (1-78)||(9644696-9644773)
chr6 (1-78)||(9650713-9650790)
chr6 (1-80)||(6068564-6068643)
chr6 (1-78)||(13043758-13043835)
chr6 (1-62)||(28747187-28747248)
chr6 (5-70)||(6068997-6069062)
chr6 (32-82)||(9644780-9644830)
chr6 (32-82)||(9650797-9650847)
chr6 (1-87)||(22896462-22896539)
chr6 (22-79)||(3788111-3788168)
chr6 (32-81)||(8099614-8099663)
chr6 (32-80)||(26602407-26602455)
chr6 (32-79)||(6330199-6330246)
chr6 (32-79)||(11572144-11572191)
chr6 (32-79)||(13853592-13853639)
chr6 (1-48)||(17992018-17992065)
chr6 (32-78)||(2830419-2830465)
chr6 (32-78)||(8382969-8383015)
chr6 (32-79)||(6068650-6068697)
chr6 (1-80)||(14936510-14936589)
chr6 (21-59)||(6549902-6549940)
chr6 (32-78)||(8417793-8417839)
chr6 (32-81)||(33052791-33052840)
chr6 (34-79)||(35031000-35031045)
chr6 (34-78)||(17992074-17992118)
chr6 (32-79)||(22896546-22896593)
chr6 (32-79)||(28747133-28747180)
chr6 (32-78)||(8186451-8186497)
chr6 (24-78)||(32045157-32045211)
chr6 (46-83)||(2972158-2972195)
chr6 (34-67)||(12473651-12473684)
chr6 (49-81)||(33859610-33859642)
[»] chr5 (45 HSPs)
chr5 (1-80)||(37149008-37149087)
chr5 (1-78)||(9395350-9395427)
chr5 (1-78)||(26350403-26350480)
chr5 (1-81)||(36563591-36563671)
chr5 (1-80)||(582987-583066)
chr5 (1-80)||(20848072-20848151)
chr5 (1-79)||(13033050-13033128)
chr5 (1-79)||(13103023-13103101)
chr5 (1-79)||(23359941-23360019)
chr5 (1-79)||(41989460-41989538)
chr5 (1-78)||(11795168-11795245)
chr5 (1-81)||(4443957-4444037)
chr5 (1-81)||(17025621-17025701)
chr5 (1-80)||(37641951-37642031)
chr5 (1-79)||(38361744-38361822)
chr5 (1-54)||(21575970-21576023)
chr5 (1-57)||(6126845-6126901)
chr5 (1-71)||(13539920-13539986)
chr5 (32-81)||(41989404-41989453)
chr5 (32-80)||(9395434-9395482)
chr5 (32-80)||(13103108-13103156)
chr5 (32-79)||(17025708-17025755)
chr5 (32-79)||(36563537-36563584)
chr5 (32-78)||(6126908-6126954)
chr5 (24-80)||(966224-966280)
chr5 (34-78)||(11574166-11574210)
chr5 (32-80)||(13033135-13033183)
chr5 (32-79)||(11795252-11795299)
chr5 (32-79)||(21576030-21576077)
chr5 (32-79)||(37642038-37642085)
chr5 (32-78)||(23360026-23360072)
chr5 (32-78)||(37148955-37149001)
chr5 (1-78)||(39290775-39290851)
chr5 (24-79)||(2629620-2629675)
chr5 (32-75)||(4444044-4444087)
chr5 (46-80)||(36417044-36417078)
chr5 (34-83)||(36595771-36595818)
chr5 (51-80)||(1643466-1643495)
chr5 (23-72)||(3549553-3549602)
chr5 (22-71)||(27081014-27081063)
chr5 (46-79)||(29299355-29299388)
chr5 (20-64)||(2366352-2366396)
chr5 (50-78)||(20848175-20848203)
chr5 (49-81)||(26898311-26898343)
chr5 (50-78)||(38361713-38361741)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-81)||(49502-49579)
scaffold0009 (22-78)||(49579-49635)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-71)||(1342-1412)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-78)||(6184-6261)
scaffold0464 (32-80)||(6129-6177)
[»] scaffold0415 (1 HSPs)
scaffold0415 (4-79)||(13782-13857)
[»] scaffold0011 (2 HSPs)
scaffold0011 (3-78)||(231358-231433)
scaffold0011 (32-86)||(231295-231349)
[»] scaffold0650 (1 HSPs)
scaffold0650 (6-79)||(43-115)
[»] scaffold0171 (1 HSPs)
scaffold0171 (32-75)||(12437-12480)
[»] scaffold0236 (1 HSPs)
scaffold0236 (47-81)||(16766-16800)
[»] scaffold0002 (1 HSPs)
scaffold0002 (49-79)||(492303-492333)
[»] scaffold0007 (2 HSPs)
scaffold0007 (49-78)||(77344-77373)
scaffold0007 (51-80)||(77466-77495)


Alignment Details
Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 32887318 - 32887211
Alignment:
Q  80 ttaacatatactaagatttgtcattttattggtcaaaaaatacatttgtcatttctcacaacgtcgttattttgaagttttattttgttgaatcaaacac 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32887318 ttaacatatactaagatttgtcattttattggtcaaaaaatacatttgtcatttctcacaacgttgttattttgaagttttattttgttgaatcaaacac 32887219  T
Q  180 gttcatct 187  Q
    ||| ||||    
T  32887218 gtttatct 32887211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26471118 - 26471204
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaacata 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  26471118 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattaaacata 26471204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27159411 - 27159490
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27159411 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44668146 - 44668225
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44668146 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9981724 - 9981646
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9981724 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11796010 - 11795928
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaa 83  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11796010 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttaa 11795928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31842848 - 31842925
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31842848 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39402019 - 39402096
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39402019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47216752 - 47216829
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47216752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14984914 - 14984834
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  14984914 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtattt 14984834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34042773 - 34042695
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  34042773 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1050965 - 1050888
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1050965 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23278054 - 23278131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  23278054 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44955259 - 44955336
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  44955259 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 47588390 - 47588475
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaacat 86  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||| |||||    
T  47588390 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagtattaaacat 47588475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47777534 - 47777603
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47777534 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 12483684 - 12483760
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12483684 tagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17556830 - 17556751
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattca-cttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  17556830 atctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 25694396 - 25694317
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| | |||||||||||    
T  25694396 atctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaataggatcagagggagtatt 25694317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47969772 - 47969694
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc-ttataaataggaccggagggagta 78  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  47969772 atctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggagagagta 47969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 11897126 - 11897053
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||| || ||||||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  11897126 gttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16448161 - 16448239
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||| ||| ||||||||||||| ||||||  ||||||||||||| || |||||||||||||||||||||||||||||||    
T  16448161 atctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 11897138 - 11897187
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagtattt 11897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 12213530 - 12213605
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||| || ||||||||| | ||||||||||||||  |||||||||||||| ||| |||||||||||    
T  12213530 tagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 37552217 - 37552272
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 12483684 - 12483626
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37552218 - 37552141
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||| ||||||||||||||||| ||||||  ||| ||||||||  || ||| ||||||||||||||||||||||||||    
T  37552218 atctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 14984921 - 14984969
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17556837 - 17556884
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  17556837 acttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 25694403 - 25694450
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  25694403 acttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 11796017 - 11796063
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  11796017 acttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 27159404 - 27159358
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  27159404 acttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31842841 - 31842795
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  31842841 acttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 39402012 - 39401966
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39402012 acttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44668139 - 44668093
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  44668139 acttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 47777527 - 47777481
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  47777527 acttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 1050972 - 1051021
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  1050972 actttagttgacccaaaattctcttataaataggaccggagggagtattt 1051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 34042780 - 34042829
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 9981731 - 9981779
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  9981731 acttttgttgacccaaaattctcttataaataggaccggagggaatatt 9981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 47216745 - 47216698
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  47216745 acttttgttgacccaaaattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 26471111 - 26471065
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  26471111 acttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11989853 - 11989796
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||||||||||||| |||   ||||||||||| || |||||||||||||||    
T  11989853 gttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 5392218 - 5392278
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||  |||||| ||||||||||||||||||||| || |||||| || |||||||    
T  5392218 ccaaatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtatt 5392278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 11989853 - 11989911
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||  | |||| |||||  |||||||| ||||||||||||||||||||||||    
T  11989853 ccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 12062635 - 12062679
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||| | |||||||||  ||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 47588383 - 47588335
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||  |||| ||||||||||    
T  47588383 acttttgttgacccaaaattctcttataaataaaaccgaagggagtatt 47588335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 47969779 - 47969827
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||| | ||| || | ||||||||||||||||||||||||||    
T  47969779 acttttgttgatccaaaattattttataaataggaccggagggagtatt 47969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12937 - 12852
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaacat 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  12937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattgaacat 12852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 12944 - 12992
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  12944 acttttgctgacccaaaattctcttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7785831 - 7785916
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaacat 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  7785831 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattgaacat 7785916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7805752 - 7805837
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaacat 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  7805752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattgaacat 7805837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31654690 - 31654613
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31654690 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 54665 - 54744
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  54665 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2890215 - 2890294
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2890215 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43199407 - 43199485
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43199407 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3304331 - 3304408
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3304331 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6552732 - 6552655
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6552732 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12343193 - 12343270
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12343193 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32114528 - 32114605
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32114528 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44498240 - 44498317
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44498240 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12763707 - 12763785
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  12763707 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25601053 - 25601131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  25601053 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32211416 - 32211494
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  32211416 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15888405 - 15888482
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15888405 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39571256 - 39571333
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  39571256 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33289314 - 33289393
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  33289314 atctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7012248 - 7012171
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  7012248 atctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 4245649 - 4245714
Alignment:
Q  16 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 4245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13578934 - 13578856
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||    
T  13578934 atctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8587247 - 8587170
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||    
T  8587247 atctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28463688 - 28463616
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| ||| ||||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||    
T  28463688 atctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 27422266 - 27422322
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 25601054 - 25600999
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 32211407 - 32211358
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtatttaa 83  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  32211407 ttttgttgacccaaaattctcttataaataggaccggagggagtatttaa 32211358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 39571249 - 39571200
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 39571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 7785824 - 7785776
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 24692040 - 24692116
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaacat 86  Q
    |||||||||| || ||||||  |||||||||||||||| ||| |||||||||||||| || ||||||||||| ||||    
T  24692040 aaaattcagttcagatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatttgacat 24692116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 54658 - 54611
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  54658 acttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 2890208 - 2890161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  2890208 acttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 43199400 - 43199353
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  43199400 acttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6552739 - 6552785
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  6552739 acttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 33289307 - 33289261
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  33289307 acttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 12763700 - 12763651
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  12763700 acttttgttgacccaaaattatcttataaataggaccggagggagtattt 12763651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 7805745 - 7805697
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  7805745 acttttgctgacccaaaattctcttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 17006982 - 17006914
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggga 75  Q
    |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||||    
T  17006982 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 17570265 - 17570333
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggga 75  Q
    |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||||    
T  17570265 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 44498233 - 44498185
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  44498233 acttttattgacccaaaattctcttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 32114519 - 32114472
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||||    
T  32114519 ttttgttgacccaaaattttcttataaataggaccggagggagtattt 32114472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 3304324 - 3304278
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  3304324 acttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 7012255 - 7012304
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||||    
T  7012255 acttttgttgatccaaaattctcttataaataggaccggaggaagtattt 7012304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 15888398 - 15888349
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||| || |||||||||||||    
T  15888398 acttttgttgacccaaaattctcttataaatagaactggagggagtattt 15888349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 12343186 - 12343146
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  12343186 acttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 31654697 - 31654743
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31654697 acttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 33057638 - 33057592
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||| | || ||| ||||||||||||||||||||||||||||    
T  33057638 ttttgttgatccaactttgtcttataaataggaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 24203046 - 24203091
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||| || ||||||| ||||| ||||||||||||||||||||||    
T  24203046 caaatatatccacttttattgacataaatttctcttataaatagga 24203091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 30171540 - 30171483
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagt 77  Q
    |||| |||||| ||||||||||||  ||| ||||||| ||||||||| ||||||||||    
T  30171540 ccaagtacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 33057680 - 33057725
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||| || ||||||||||||||| ||||||| |||||||    
T  33057680 ttttgttgaccaaactttctcttataaataagaccggatggagtat 33057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 34157778 - 34157810
Alignment:
Q  46 aaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||| |||||||||||||||||||||    
T  34157778 aaatttctcttgtaaataggaccggagggagta 34157810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 40355249 - 40355297
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| |||| |||||||||||||| | ||||||| |||||    
T  40355249 acttttgttgaccaaaatatctcttataaatagaatcggagggcgtatt 40355297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Complemental strand, 41915620 - 41915592
Alignment:
Q  51 tctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||    
T  41915620 tctcttataaataggaccggagggagtat 41915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1565782 - 1565863
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattta 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1565782 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattta 1565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 46840937 - 46840857
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46840937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 46840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1738500 - 1738579
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1738500 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7240826 - 7240747
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7240826 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22285776 - 22285697
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22285776 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38063966 - 38064044
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38063966 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23314192 - 23314269
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23314192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31319452 - 31319529
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31319452 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36016249 - 36016326
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36016249 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9268833 - 9268754
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  9268833 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7482302 - 7482224
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7482302 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28536804 - 28536882
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28536804 atctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36583472 - 36583395
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36583472 atctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 94371 - 94442
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  94371 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38441537 - 38441460
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  38441537 atctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4790325 - 4790247
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  4790325 atctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9575486 - 9575404
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaa 83  Q
    |||||||||||||||||||| |||||| || ||||||||||||| || ||||||||| |||||||||| ||||||||||||||    
T  9575486 atctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagtatttaa 9575404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33418453 - 33418392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33418453 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 40840175 - 40840249
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||| | ||||||| || ||| |||||||| ||||||||||||||| |||||    
T  40840175 tagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggagagagta 40840249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 1738493 - 1738445
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7240833 - 7240881
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7482309 - 7482357
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 9268840 - 9268887
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  9268840 acttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 22285783 - 22285829
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22285783 acttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 23314185 - 23314139
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23314185 acttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 46840944 - 46840990
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  46840944 acttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 36583479 - 36583527
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 38063959 - 38063911
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  38063959 acttttgttgacccaaaattctcttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 94364 - 94318
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  94364 acttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31319445 - 31319399
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  31319445 acttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 38441544 - 38441590
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38441544 acttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7269458 - 7269535
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||| ||||||||||||||  | ||||||  | ||||||||||| || ||| ||||||||||| ||||||||||||||    
T  7269458 atctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 46877666 - 46877719
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagt 77  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||||| |||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccggatggagt 46877719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 9575495 - 9575539
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||    
T  9575495 ttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 33418460 - 33418500
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  33418460 acttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 1565775 - 1565728
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||| |||| |||||||||    
T  1565775 acttttgttgacccaaaattctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 4790332 - 4790379
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  4790332 acttttattgacccaaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 7661122 - 7661075
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||||    
T  7661122 acttttattgacataaatttctcttataaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 7661160 - 7661207
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| |||| |||| ||||||||||||| ||||||||||    
T  7661160 acttttgttgacccaaatgtctcatataaataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 28469535 - 28469480
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||| |||||||||||||||||| ||| ||||||||| || || |||||||||    
T  28469535 atacattaacttttgttgacctaaatgtcttttataaataagatcgaagggagtat 28469480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 28536797 - 28536750
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||| |||| | ||| ||||||||||||||||||||||||||||||    
T  28536797 acttttattgatccaaaattctcttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 40840165 - 40840126
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  40840165 acttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 3411449 - 3411483
Alignment:
Q  46 aaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||| |||||||||||||    
T  3411449 aaatttctcttataaataggatcggagggagtatt 3411483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 79
Target Start/End: Complemental strand, 5347751 - 5347721
Alignment:
Q  49 tttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||    
T  5347751 tttctcttataaataggaccggagggagtat 5347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 36016242 - 36016196
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| ||||||||||||||||||| || ||||||    
T  36016242 acttttgttgacccaaaattctcttataaataggaccagatggagta 36016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 28677341 - 28677313
Alignment:
Q  53 tcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||    
T  28677341 tcttataaataggaccggagggagtattt 28677313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17653789 - 17653712
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17653789 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37508998 - 37508921
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37508998 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44785449 - 44785530
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattta 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44785449 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattta 44785530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4238671 - 4238592
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4238671 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22722008 - 22721929
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22722008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19557105 - 19557183
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19557105 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36095733 - 36095811
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36095733 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46208107 - 46208029
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46208107 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49823434 - 49823512
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49823434 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10298056 - 10297979
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10298056 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35513550 - 35513473
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35513550 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8817439 - 8817519
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  8817439 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattt 8817519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2787885 - 2787956
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2787885 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8437502 - 8437423
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  8437502 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21295379 - 21295458
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21295379 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34080083 - 34080162
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34080083 atcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 38964469 - 38964390
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  38964469 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48340474 - 48340397
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  48340474 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51406750 - 51406673
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  51406750 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9111547 - 9111627
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  9111547 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattt 9111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40691049 - 40691120
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40691049 atctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggag 40691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42507408 - 42507487
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  42507408 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6013389 - 6013463
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggga 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  6013389 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggaggga 6013463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42170399 - 42170478
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  42170399 atctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 33942985 - 33943063
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||| |||||||    
T  33942985 atctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcggaaggagtat 33943063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 46208114 - 46208161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 10298063 - 10298113
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattta 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagtattta 10298113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 40691042 - 40690993
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 40690993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 33128261 - 33128205
Alignment:
Q  23 aatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggagagagtat 33128205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 49823427 - 49823380
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  49823427 acttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 6013382 - 6013336
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 9213588 - 9213646
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||  | |||||||||||||||||||||| ||||||||||| ||||||||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 19557098 - 19557052
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  19557098 acttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 34080076 - 34080030
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  34080076 acttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 38964476 - 38964522
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  38964476 acttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 48340481 - 48340527
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  48340481 acttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 9027188 - 9027139
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  9027188 acttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 17653796 - 17653845
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtattt 17653845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 51406759 - 51406804
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  51406759 ttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 8817432 - 8817384
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  8817432 acttttgttgacccaaaattctcttataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 9213577 - 9213513
Alignment:
Q  17 agtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    |||||| ||||||  ||||||||||||  |||| ||| |||||||||||||||||||||||||||    
T  9213577 agtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagtattt 9213513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 4238678 - 4238725
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 8437509 - 8437556
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  8437509 acttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 9111540 - 9111497
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggga 75  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  9111540 acttttgttgacccaaaattctcttataaataggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 22722015 - 22722062
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  22722015 acttttgttgacccaaaattctcttataaataggaccggatggagtat 22722062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 37509005 - 37509052
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 42507401 - 42507358
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggga 75  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  42507401 acttttgttgacccaaaattctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 2787878 - 2787832
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  2787878 acttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 2131734 - 2131802
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||| || ||| ||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||    
T  2131734 aaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 43323132 - 43323072
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||| | |||||||||||  ||||||||||||| || ||| ||||||||||||||    
T  43323132 gttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 45652123 - 45652067
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||||| || ||||||||||  |||| ||||||||||||||||| ||||||||||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 8951954 - 8952009
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 61  Q
    ||||||||||||||||||||||||| |||||||| ||   || |||||||||||||    
T  8951954 gttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 26001141 - 26001184
Alignment:
Q  25 tacattcacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacc 26001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 29285838 - 29285873
Alignment:
Q  28 attcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||||||||||||||| |||||||||||    
T  29285838 attcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 34988121 - 34988074
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| |||| ||||| ||||||||||||| |||||||||    
T  34988121 acttttgttgacccaaatgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 5323279 - 5323337
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||  ||||||||||||| ||||||  ||||||||||| | |||||||||||    
T  5323279 ccaaatacatcaacttttgttgacccaaattttacttataaatagtatcggagggagta 5323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 42170392 - 42170346
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| ||||||||||||||||||| || ||||||    
T  42170392 acttttgttgacccaaaattctcttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44785442 - 44785396
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  44785442 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 26019526 - 26019477
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||| ||||||| || |||||||||||||||||| |||| |||||||||    
T  26019526 actttggttgaccaaattttctcttataaataggatcggaaggagtattt 26019477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 42299628 - 42299697
Alignment:
Q  11 aaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||| || | ||||||| | ||||||||| | || ||||||||||||||| || |||||||||||||    
T  42299628 aaattcattctagatacattgagttttgttgatccaactttctcttataaatacgatcggagggagtatt 42299697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 21653375 - 21653343
Alignment:
Q  46 aaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||| |||||||||||||||||||||    
T  21653375 aaatttctcttgtaaataggaccggagggagta 21653343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 40215022 - 40215050
Alignment:
Q  51 tctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||    
T  40215022 tctcttataaataggaccggagggagtat 40215050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 6e-36; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43900626 - 43900546
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43900626 atctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagtattt 43900546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3372198 - 3372119
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3372198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47833688 - 47833609
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47833688 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48336340 - 48336261
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48336340 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20538739 - 20538816
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20538739 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24704447 - 24704370
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24704447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53337447 - 53337370
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53337447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3993053 - 3992974
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  3993053 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42797809 - 42797730
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  42797809 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26231654 - 26231576
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26231654 atctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33551278 - 33551200
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33551278 atctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 40913246 - 40913320
Alignment:
Q  5 agttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40913246 agttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6121946 - 6122023
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  6121946 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46797802 - 46797725
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  46797802 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 3904739 - 3904814
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  3904739 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 52756752 - 52756681
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52756752 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggag 52756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7579387 - 7579309
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  7579387 atctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41469819 - 41469901
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaa 83  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  41469819 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtatttaa 41469901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47838670 - 47838748
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  47838670 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33621873 - 33621805
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33621873 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccg 33621805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 51894635 - 51894714
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  51894635 atctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtatt 51894714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 5986950 - 5986876
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||| ||||    
T  5986950 tagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3422137 - 3422073
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3422137 atctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 41615732 - 41615794
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  41615732 tagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 25855155 - 25855082
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||| |||||||||||| ||||||||||    
T  25855155 gttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 29845719 - 29845644
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| |||||| | |||||||||    
T  29845719 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggactgaagggagtat 29845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 17236845 - 17236919
Alignment:
Q  6 gttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||| ||| |||||  ||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 3422144 - 3422192
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41469812 - 41469764
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 47838663 - 47838615
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 24704446 - 24704501
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 5986950 - 5987008
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagtatt 5987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 6121939 - 6121893
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  6121939 acttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 46797809 - 46797855
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  46797809 acttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 47833695 - 47833741
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  47833695 acttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 51894628 - 51894582
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  51894628 acttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 3904727 - 3904682
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  3904727 ttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 40913235 - 40913190
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagt 77  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 17344284 - 17344212
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| || ||||||  |||||||||||  ||| |||||||||||||||| ||||||| ||||||    
T  17344284 ttaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggagcgagtat 17344212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 33621880 - 33621928
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  33621880 acttttgttgacccaaaattatcttataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 48336347 - 48336395
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  48336347 acttttgttgacccaaaattttcttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 3993060 - 3993107
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  3993060 acttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 53337454 - 53337501
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  53337454 acttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 3372205 - 3372251
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  3372205 acttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44900126 - 44900080
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||    
T  44900126 acttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50430471 - 50430533
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||| |||||||||||| |||||||||||  ||||||||||||| || || ||||||||||||    
T  50430471 atctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 41615732 - 41615676
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||  ||||||||||| | || ||||||||||||||||||||||| ||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 52756759 - 52756806
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| |||| ||||||||||||||| |||||||||    
T  52756759 acttttgttgacccaaaattcttttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 1716347 - 1716301
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| || | ||||||||||||| ||||||||||||||    
T  1716347 acttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 7579394 - 7579440
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  7579394 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 43900633 - 43900679
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  43900633 acttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 48361083 - 48361049
Alignment:
Q  46 aaatttctcttataaataggaccggagggagtatt 80  Q
    |||||| ||||||||||||||||||||||||||||    
T  48361083 aaatttttcttataaataggaccggagggagtatt 48361049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 6924746 - 6924802
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||| || ||||||||||| |||||||||||||||| ||| ||||||| |||||||    
T  6924746 aaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggac 6924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 17344297 - 17344346
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||| | |||||||||||||||||| ||  |||||||||||||    
T  17344297 acttttgttgatccaaatttctcttataaataagattggagggagtattt 17344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaatag 64  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 38160416 - 38160372
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||| ||||||||||||| ||| |||| |||||    
T  38160416 ttttgttgacctaaatctctcttataaatatgactggagagagta 38160372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 6e-36; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41478692 - 41478772
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41478692 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 41478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37990066 - 37990145
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37990066 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3055635 - 3055557
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3055635 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4683985 - 4684063
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4683985 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 15896919 - 15896841
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15896919 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44397624 - 44397546
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44397624 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44398763 - 44398685
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44398763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13197763 - 13197840
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13197763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 15372303 - 15372224
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15372303 atctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16044370 - 16044447
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16044370 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37666663 - 37666740
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37666663 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13344561 - 13344481
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  13344561 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 16243836 - 16243907
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16243836 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggag 16243907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38917575 - 38917653
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  38917575 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6648572 - 6648649
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  6648572 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9047808 - 9047879
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  9047808 atctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggag 9047879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12337990 - 12338067
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||| ||||    
T  12337990 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41492949 - 41493015
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41492949 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30099235 - 30099307
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  30099235 atctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggagg 30099307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 12170455 - 12170529
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||| |||||||||||    
T  12170455 tagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31150730 - 31150653
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||| |||||||||||||  ||||||||||||  || |||||||||||||||||| ||||| |||||    
T  31150730 atctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggagagagta 31150653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41492942 - 41492894
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 3055642 - 3055691
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 3055691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 15896926 - 15896979
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatttaaca 85  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  15896926 acttttgttgacccaaaattctcttataaataggaccggagggagtaattaaca 15896979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 37990059 - 37990010
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 37990010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44804631 - 44804680
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 50  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804631 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 6648565 - 6648517
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9047801 - 9047753
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41478685 - 41478637
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 38917568 - 38917521
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  38917568 acttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 44398770 - 44398817
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  44398770 acttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 12337983 - 12337937
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  12337983 acttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 13197756 - 13197710
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  13197756 acttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||  ||||||||||||||| || |||||| |||||||||||||||||||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 15372310 - 15372356
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  15372310 acttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 16243829 - 16243781
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  16243829 acttttgttgacccaaaattctcttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 37666656 - 37666608
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  37666656 actttagttgacccaaaattctcttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 13344568 - 13344615
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  13344568 acttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 30099228 - 30099181
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  30099228 acttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 44397631 - 44397678
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  44397631 acttttgttgacccaaaattctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 16044363 - 16044317
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  16044363 actttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 30852682 - 30852748
Alignment:
Q  13 attcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||| | ||||||  |||||| || | |||| |||||||||||||||||||||||||||||||    
T  30852682 attcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 16734855 - 16734802
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 59  Q
    ||||||||||||||||| ||||||  ||||||||||||| || |||||||||||    
T  16734855 gttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 41453131 - 41453090
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaa 47  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  41453131 gttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 23227344 - 23227404
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||  ||||||||||||| |||| ||||||||||||||||| | ||| ||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 80
Target Start/End: Original strand, 13775831 - 13775862
Alignment:
Q  49 tttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||    
T  13775831 tttctcttataaataggaccggagggagtatt 13775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 44804624 - 44804581
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggga 75  Q
    ||||||||| || |||| ||||||||||||||||||||||||||    
T  44804624 acttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 79
Target Start/End: Complemental strand, 42263498 - 42263468
Alignment:
Q  49 tttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||    
T  42263498 tttctcttataaataggaccggagggagtat 42263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 23227316 - 23227271
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||| | ||||||||||| |||| ||||||||||    
T  23227316 ttttgttgacctaaatatttcttataaatatgaccagagggagtat 23227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 45294395 - 45294452
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagt 77  Q
    |||||||| || |||||||||||||||||||| ||||| |||||  |||| |||||||    
T  45294395 ccaaatactttaacttttgttgacctaaatttttcttaaaaataaaaccgaagggagt 45294452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 7765822 - 7765790
Alignment:
Q  49 tttctcttataaataggaccggagggagtattt 81  Q
    |||||||| ||||||||||||||||||||||||    
T  7765822 tttctcttgtaaataggaccggagggagtattt 7765790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 10069283 - 10069339
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||| |||||||||||||||||| | ||||| |||||| ||| |||| ||||||    
T  10069283 atacattaacttttgttgacctaaatatttcttaaaaatagtaccagaggaagtatt 10069339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 11711446 - 11711478
Alignment:
Q  51 tctcttataaataggaccggagggagtatttaa 83  Q
    |||||| ||||||||||||||||||||||||||    
T  11711446 tctcttgtaaataggaccggagggagtatttaa 11711478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 36089489 - 36089457
Alignment:
Q  32 acttttgttgacctaaatttctcttataaatag 64  Q
    |||||||||||||||||| ||||||||||||||    
T  36089489 acttttgttgacctaaatatctcttataaatag 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23862 - 23783
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23862 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 23869 - 23917
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  23869 acttttgttgacccaaaattttcttataaataggaccggagggagtatt 23917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8383022 - 8383101
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8383022 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33052847 - 33052926
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33052847 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2830412 - 2830334
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2830412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11572198 - 11572276
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11572198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6330192 - 6330115
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6330192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26602400 - 26602323
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26602400 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13853646 - 13853725
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  13853646 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8099607 - 8099529
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8099607 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35031054 - 35031132
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  35031054 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8417846 - 8417925
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  8417846 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6143631 - 6143553
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  6143631 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9644773 - 9644696
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  9644773 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9650790 - 9650713
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  9650790 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6068643 - 6068564
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  6068643 atctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13043835 - 13043758
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  13043835 atctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28747187 - 28747248
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28747187 atctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 6068997 - 6069062
Alignment:
Q  5 agttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  6068997 agttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 9644780 - 9644830
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattta 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagtattta 9644830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 9650797 - 9650847
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattta 82  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagtattta 9650847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22896539 - 22896462
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatttaacata 87  Q
    |||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||||||||||||||| || |||||    
T  22896539 atctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagtacttcacata 22896462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 3788111 - 3788168
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 8099614 - 8099663
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 8099663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 26602407 - 26602455
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 6330199 - 6330246
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  6330199 acttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 11572191 - 11572144
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  11572191 acttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 13853639 - 13853592
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  13853639 acttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17992065 - 17992018
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaa 48  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  17992065 atctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 2830419 - 2830465
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  2830419 acttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 8383015 - 8382969
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  8383015 acttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 6068650 - 6068697
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  6068650 acttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14936510 - 14936589
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||||||||| ||||   |||||||||||  ||| ||||||||| |||| |||||||||||||||||| |||||| ||||    
T  14936510 atctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagggattatt 14936589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttata 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 8417839 - 8417793
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  8417839 acttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 33052840 - 33052791
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    |||||| |||||| ||| |||||||||||||||||||||| |||||||||    
T  33052840 acttttattgacccaaaattctcttataaataggaccggatggagtattt 33052791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 35031045 - 35031000
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  35031045 ttttgttgacccaaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 17992074 - 17992118
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||    
T  17992074 ttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 22896546 - 22896593
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||  ||| ||||||||||||||||||||| ||||||||    
T  22896546 acttttgttgacaaaaaattctcttataaataggaccggcgggagtat 22896593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 28747180 - 28747133
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||| | |||||||||    
T  28747180 acttttgttgacccaaaattctcttataaataggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 8186451 - 8186497
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||| | |||||||| |||||||||||||||| |||||||    
T  8186451 acttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 32045157 - 32045211
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||| |||||||||||  ||||| ||| |||||||||||| |||||||||||    
T  32045157 atacattaacttttgttgagttaaatatcttttataaataggatcggagggagta 32045211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 2972195 - 2972158
Alignment:
Q  46 aaatttctcttataaataggaccggagggagtatttaa 83  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  2972195 aaatttctcttataaataagaccggatggagtatttaa 2972158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 12473684 - 12473651
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggac 67  Q
    |||| |||||||||||||||||||||||||||||    
T  12473684 ttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 33859610 - 33859642
Alignment:
Q  49 tttctcttataaataggaccggagggagtattt 81  Q
    |||||||| ||||||||||||||||||||||||    
T  33859610 tttctcttgtaaataggaccggagggagtattt 33859642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37149008 - 37149087
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37149008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9395427 - 9395350
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9395427 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26350403 - 26350480
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26350403 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36563591 - 36563671
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  36563591 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 583066 - 582987
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  583066 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20848151 - 20848072
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  20848151 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13033128 - 13033050
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13033128 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13103101 - 13103023
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13103101 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23360019 - 23359941
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  23360019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41989460 - 41989538
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  41989460 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11795245 - 11795168
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  11795245 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4444037 - 4443957
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  4444037 atctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtattt 4443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17025701 - 17025621
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17025701 atctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagtattt 17025621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37642031 - 37641951
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  37642031 atctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38361744 - 38361822
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||||    
T  38361744 atctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21576023 - 21575970
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576023 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6126901 - 6126845
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 57  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126901 atctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13539920 - 13539986
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||||||||||||    
T  13539920 atctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 41989453 - 41989404
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 41989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 9395434 - 9395482
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 13103108 - 13103156
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17025708 - 17025755
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  17025708 acttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 36563584 - 36563537
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  36563584 acttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6126908 - 6126954
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  6126908 acttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 966224 - 966280
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| |||||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagggggtatt 966280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 11574166 - 11574210
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||| |||||||||||||||||||||| |||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 13033135 - 13033183
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 11795252 - 11795299
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||    
T  11795252 acttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 21576030 - 21576077
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  21576030 acttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 37642038 - 37642085
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  37642038 acttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 37149001 - 37148955
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  37149001 acttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39290851 - 39290775
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||| ||||||||| | |||||||||||  | |||||||||||| |  ||||||||| |||||||||||||||||||    
T  39290851 atctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

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Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 2629620 - 2629675
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    ||||||| |||||||||||||||||| | ||||||||| | ||||||||| |||||    
T  2629620 atacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagtat 2629675  T

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Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 4444044 - 4444087
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggga 75  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||    
T  4444044 acttttgttgatctaaaattctcttataaataagaccggaggga 4444087  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 36417078 - 36417044
Alignment:
Q  46 aaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||| |||||||||||||||||||||||    
T  36417078 aaatttctcttgtaaataggaccggagggagtatt 36417044  T

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Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 36595818 - 36595771
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggagggagtatttaa 83  Q
    |||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  36595818 ttttgttgacctaactttctcttataaataagaccg--gggagtatttaa 36595771  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 1643466 - 1643495
Alignment:
Q  51 tctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||    
T  1643466 tctcttataaataggaccggagggagtatt 1643495  T

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Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 3549602 - 3549553
Alignment:
Q  23 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||  ||||||||| |  ||||||||||||||||||||||||||||    
T  3549602 aatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

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Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 27081014 - 27081063
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||  |||||||||||||||||| |||||| ||||||||| ||||    
T  27081014 aaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

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Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 29299388 - 29299355
Alignment:
Q  46 aaatttctcttataaataggaccggagggagtat 79  Q
    |||||| |||||||||||||||||||||||||||    
T  29299388 aaatttttcttataaataggaccggagggagtat 29299355  T

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Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaatag 64  Q
    ||||||||||  ||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Original strand, 20848175 - 20848203
Alignment:
Q  50 ttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||    
T  20848175 ttctcttataaataggaccggagggagta 20848203  T

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Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 26898311 - 26898343
Alignment:
Q  49 tttctcttataaataggaccggagggagtattt 81  Q
    |||||||| ||||||||||||||||||||||||    
T  26898311 tttctcttgtaaataggaccggagggagtattt 26898343  T

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Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 38361741 - 38361713
Alignment:
Q  50 ttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||||||||||    
T  38361741 ttctcttataaataggaccggagggagta 38361713  T

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Target: scaffold0009 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 49579 - 49502
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattt 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49579 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 49502  T

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Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

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Target: scaffold1707 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1412 - 1342
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 1342  T

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Target: scaffold0464 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6184 - 6261
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6184 atctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

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Target: scaffold0464; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 6177 - 6129
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  6177 acttttgttgacccaaaattttcttataaataggaccggagggagtatt 6129  T

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Target: scaffold0415 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 13782 - 13857
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| |||||| | |||||||||    
T  13782 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggactgaagggagtat 13857  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 231358 - 231433
Alignment:
Q  3 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 78  Q
    |||||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||| ||||| |||||||||||    
T  231358 ctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

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Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 231349 - 231295
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagggagtatttaacat 86  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||| ||||    
T  231349 acttttgttgacctaatattctcctataaataggaccggagggagtatttgacat 231295  T

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Target: scaffold0650 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 43 - 115
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 79  Q
    |||||||||| |||||||||||||  ||||||||||||| |  |||||| ||||||||| ||||||||||||||    
T  43 gttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtat 115  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 12437 - 12480
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggga 75  Q
    |||||| |||||| |||| |||||||||||||||||||||||||    
T  12437 actttttttgaccaaaatatctcttataaataggaccggaggga 12480  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 16766 - 16800
Alignment:
Q  47 aatttctcttataaataggaccggagggagtattt 81  Q
    ||||| |||||||||||||||||||||||||||||    
T  16766 aatttttcttataaataggaccggagggagtattt 16800  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 79
Target Start/End: Complemental strand, 492333 - 492303
Alignment:
Q  49 tttctcttataaataggaccggagggagtat 79  Q
    |||||||||||||||||||||||||||||||    
T  492333 tttctcttataaataggaccggagggagtat 492303  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 77373 - 77344
Alignment:
Q  49 tttctcttataaataggaccggagggagta 78  Q
    ||||||||||||||||||||||||||||||    
T  77373 tttctcttataaataggaccggagggagta 77344  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 77466 - 77495
Alignment:
Q  51 tctcttataaataggaccggagggagtatt 80  Q
    ||||||||||||||||||||||||||||||    
T  77466 tctcttataaataggaccggagggagtatt 77495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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