View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13692_low_8 (Length: 390)

Name: NF13692_low_8
Description: NF13692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13692_low_8
NF13692_low_8
[»] chr1 (52 HSPs)
chr1 (43-258)||(9658946-9659161)
chr1 (93-275)||(18129615-18129793)
chr1 (83-274)||(1090123-1090313)
chr1 (288-372)||(9659363-9659447)
chr1 (93-275)||(16478347-16478525)
chr1 (76-206)||(23054633-23054764)
chr1 (71-276)||(16870264-16870456)
chr1 (157-275)||(33255930-33256047)
chr1 (157-275)||(33276102-33276219)
chr1 (85-275)||(18896162-18896346)
chr1 (60-275)||(18516773-18516982)
chr1 (76-275)||(20109545-20109742)
chr1 (83-275)||(20909744-20909931)
chr1 (62-274)||(21682811-21683021)
chr1 (76-275)||(18615227-18615415)
chr1 (157-275)||(10757789-10757906)
chr1 (157-275)||(23036095-23036212)
chr1 (157-275)||(30893447-30893564)
chr1 (76-239)||(24227598-24227755)
chr1 (83-275)||(48704520-48704701)
chr1 (168-275)||(26701723-26701829)
chr1 (157-275)||(2268913-2269030)
chr1 (83-275)||(21191454-21191640)
chr1 (157-275)||(22599758-22599876)
chr1 (157-275)||(36134559-36134676)
chr1 (157-239)||(38282968-38283049)
chr1 (157-273)||(16234891-16235006)
chr1 (157-207)||(21617036-21617086)
chr1 (157-275)||(1578218-1578335)
chr1 (157-275)||(22201412-22201529)
chr1 (219-275)||(9347668-9347723)
chr1 (157-208)||(30572553-30572604)
chr1 (176-239)||(2327021-2327083)
chr1 (12-50)||(9658862-9658900)
chr1 (157-206)||(22154259-22154308)
chr1 (106-207)||(25399669-25399770)
chr1 (157-239)||(25447984-25448065)
chr1 (106-190)||(26279741-26279826)
chr1 (169-205)||(12398137-12398173)
chr1 (170-206)||(19018800-19018836)
chr1 (157-266)||(19717890-19717998)
chr1 (159-239)||(23065332-23065412)
chr1 (162-280)||(31359651-31359766)
chr1 (158-239)||(39200639-39200719)
chr1 (83-130)||(16235024-16235071)
chr1 (83-138)||(17024687-17024742)
chr1 (157-208)||(22427002-22427053)
chr1 (217-272)||(26279641-26279695)
chr1 (157-275)||(35402204-35402321)
chr1 (82-130)||(1900652-1900700)
chr1 (176-208)||(10251389-10251421)
chr1 (176-208)||(35040539-35040571)
[»] chr6 (71 HSPs)
chr6 (60-275)||(23005692-23005906)
chr6 (60-275)||(23782460-23782674)
chr6 (60-273)||(18171672-18171884)
chr6 (60-273)||(24718408-24718619)
chr6 (60-277)||(24728203-24728418)
chr6 (76-199)||(17445416-17445540)
chr6 (54-208)||(16462356-16462510)
chr6 (60-275)||(19876084-19876297)
chr6 (83-275)||(12348436-12348625)
chr6 (76-276)||(25930747-25930943)
chr6 (76-276)||(7812308-7812505)
chr6 (99-275)||(24398979-24399151)
chr6 (76-208)||(32336085-32336215)
chr6 (60-275)||(31127031-31127240)
chr6 (43-192)||(9192767-9192916)
chr6 (76-275)||(19626131-19626326)
chr6 (76-275)||(17928111-17928304)
chr6 (77-207)||(25592833-25592964)
chr6 (58-266)||(23298236-23298438)
chr6 (76-266)||(23231448-23231633)
chr6 (60-275)||(26185969-26186178)
chr6 (83-242)||(30451207-30451364)
chr6 (157-273)||(3680861-3680976)
chr6 (157-276)||(9718229-9718347)
chr6 (157-275)||(10704237-10704351)
chr6 (157-275)||(24117214-24117331)
chr6 (84-161)||(14325112-14325191)
chr6 (84-161)||(14418122-14418201)
chr6 (157-275)||(13145456-13145570)
chr6 (157-275)||(13602541-13602657)
chr6 (157-275)||(19086536-19086653)
chr6 (109-243)||(14758616-14758747)
chr6 (157-266)||(15987580-15987688)
chr6 (170-275)||(16877613-16877718)
chr6 (176-276)||(15955092-15955191)
chr6 (169-275)||(17381828-17381933)
chr6 (157-275)||(19689102-19689219)
chr6 (157-275)||(34451330-34451447)
chr6 (174-275)||(16528926-16529026)
chr6 (157-208)||(18435960-18436011)
chr6 (109-204)||(20462225-20462320)
chr6 (173-207)||(15477549-15477583)
chr6 (157-275)||(21625484-21625602)
chr6 (217-275)||(25596098-25596155)
chr6 (217-278)||(7618054-7618115)
chr6 (157-239)||(15302557-15302639)
chr6 (157-239)||(18384024-18384105)
chr6 (175-275)||(19473209-19473307)
chr6 (157-275)||(19624348-19624465)
chr6 (157-275)||(26971856-26971973)
chr6 (173-242)||(17868153-17868219)
chr6 (173-242)||(17877936-17878002)
chr6 (158-275)||(21618624-21618740)
chr6 (158-239)||(22802511-22802591)
chr6 (83-126)||(10640222-10640265)
chr6 (83-130)||(14100254-14100301)
chr6 (157-208)||(15531335-15531386)
chr6 (157-208)||(16336541-16336592)
chr6 (224-275)||(21847031-21847081)
chr6 (157-199)||(12423610-12423652)
chr6 (157-207)||(13435918-13435968)
chr6 (168-206)||(14315278-14315316)
chr6 (157-207)||(15552308-15552358)
chr6 (159-241)||(17608000-17608082)
chr6 (158-208)||(20730433-20730483)
chr6 (157-199)||(25597848-25597890)
chr6 (173-207)||(31719434-31719468)
chr6 (176-208)||(12349369-12349401)
chr6 (83-127)||(12715219-12715263)
chr6 (157-205)||(22056431-22056479)
chr6 (176-208)||(29918408-29918440)
[»] scaffold0772 (1 HSPs)
scaffold0772 (71-275)||(501-701)
[»] scaffold0364 (2 HSPs)
scaffold0364 (83-275)||(10025-10214)
scaffold0364 (83-198)||(6310-6422)
[»] chr3 (96 HSPs)
chr3 (60-266)||(8728685-8728888)
chr3 (60-266)||(9080572-9080775)
chr3 (66-276)||(19197518-19197724)
chr3 (68-207)||(14072989-14073128)
chr3 (60-275)||(13699591-13699800)
chr3 (62-276)||(4242854-4243066)
chr3 (60-258)||(20418466-20418659)
chr3 (71-273)||(16882591-16882791)
chr3 (76-276)||(10852071-10852268)
chr3 (76-275)||(17697870-17698066)
chr3 (60-276)||(19705662-19705872)
chr3 (60-272)||(13654198-13654404)
chr3 (43-275)||(14007857-14008086)
chr3 (71-275)||(50722013-50722211)
chr3 (71-275)||(50790638-50790836)
chr3 (83-275)||(14077035-14077223)
chr3 (71-275)||(7494569-7494768)
chr3 (106-275)||(11514126-11514291)
chr3 (76-275)||(3087784-3087980)
chr3 (76-275)||(12397424-12397616)
chr3 (83-275)||(16199464-16199651)
chr3 (83-275)||(20725412-20725599)
chr3 (83-275)||(12968659-12968846)
chr3 (173-275)||(21317701-21317799)
chr3 (100-275)||(6713396-6713568)
chr3 (107-275)||(19249065-19249228)
chr3 (157-275)||(2561565-2561683)
chr3 (157-275)||(33583647-33583764)
chr3 (157-275)||(33598267-33598384)
chr3 (157-275)||(41495359-41495475)
chr3 (157-275)||(49553145-49553262)
chr3 (217-275)||(16793980-16794037)
chr3 (160-275)||(38177346-38177460)
chr3 (157-275)||(14392663-14392780)
chr3 (157-239)||(28582492-28582573)
chr3 (157-275)||(31303774-31303891)
chr3 (173-275)||(13932299-13932398)
chr3 (157-276)||(16032865-16032982)
chr3 (76-207)||(16304928-16305057)
chr3 (158-275)||(22141129-22141246)
chr3 (169-282)||(24775149-24775261)
chr3 (158-275)||(29855812-29855928)
chr3 (158-276)||(11223932-11224049)
chr3 (173-275)||(15648103-15648201)
chr3 (157-264)||(17761801-17761904)
chr3 (157-264)||(19063121-19063224)
chr3 (157-239)||(26417378-26417459)
chr3 (157-275)||(52920790-52920907)
chr3 (217-277)||(6252522-6252581)
chr3 (178-275)||(7477910-7478003)
chr3 (159-207)||(19225777-19225825)
chr3 (60-183)||(19696048-19696169)
chr3 (158-275)||(20646540-20646656)
chr3 (140-207)||(54284720-54284788)
chr3 (157-208)||(5216374-5216425)
chr3 (164-241)||(7920486-7920560)
chr3 (217-276)||(15903644-15903703)
chr3 (157-208)||(46796108-46796159)
chr3 (157-208)||(49642502-49642553)
chr3 (158-273)||(11869471-11869585)
chr3 (158-275)||(50300603-50300715)
chr3 (158-273)||(53056387-53056501)
chr3 (157-239)||(2028672-2028754)
chr3 (161-275)||(3522653-3522766)
chr3 (157-198)||(12725995-12726036)
chr3 (157-275)||(14969699-14969817)
chr3 (106-275)||(27851847-27852013)
chr3 (157-205)||(37467687-37467735)
chr3 (158-239)||(40800211-40800291)
chr3 (170-243)||(1470109-1470179)
chr3 (83-130)||(6091052-6091099)
chr3 (157-208)||(6091117-6091168)
chr3 (83-130)||(13824354-13824401)
chr3 (83-130)||(15903519-15903566)
chr3 (83-130)||(49642571-49642618)
chr3 (217-275)||(6174411-6174468)
chr3 (217-275)||(13824476-13824534)
chr3 (157-207)||(13948721-13948771)
chr3 (176-275)||(14955862-14955960)
chr3 (217-275)||(15552463-15552520)
chr3 (109-207)||(19657747-19657845)
chr3 (168-206)||(20311389-20311427)
chr3 (176-239)||(20627173-20627235)
chr3 (158-208)||(47208095-47208145)
chr3 (217-281)||(13558190-13558255)
chr3 (159-208)||(30053980-30054029)
chr3 (176-208)||(1727747-1727779)
chr3 (176-208)||(2785498-2785530)
chr3 (175-207)||(2902973-2903005)
chr3 (71-123)||(7477847-7477898)
chr3 (225-276)||(9510561-9510610)
chr3 (225-276)||(9518536-9518585)
chr3 (176-208)||(15851343-15851375)
chr3 (176-208)||(21606440-21606472)
chr3 (219-275)||(33591197-33591253)
chr3 (82-130)||(41495293-41495341)
[»] chr2 (69 HSPs)
chr2 (29-208)||(24440425-24440603)
chr2 (83-275)||(21846406-21846597)
chr2 (71-278)||(24158130-24158324)
chr2 (83-275)||(24302551-24302741)
chr2 (76-207)||(20569767-20569896)
chr2 (76-278)||(15668226-15668422)
chr2 (83-275)||(41121352-41121539)
chr2 (83-275)||(18430536-18430724)
chr2 (83-207)||(44881463-44881585)
chr2 (157-281)||(40782851-40782974)
chr2 (76-199)||(25918915-25919036)
chr2 (112-207)||(24844412-24844507)
chr2 (157-275)||(25829484-25829601)
chr2 (158-275)||(20151654-20151770)
chr2 (141-207)||(14867551-14867618)
chr2 (157-208)||(20568417-20568468)
chr2 (175-278)||(22383862-22383965)
chr2 (173-277)||(25189749-25189852)
chr2 (157-276)||(21536851-21536969)
chr2 (176-275)||(28700815-28700913)
chr2 (176-275)||(28711316-28711414)
chr2 (157-275)||(17966752-17966869)
chr2 (157-275)||(22317992-22318109)
chr2 (83-275)||(26618705-26618892)
chr2 (157-275)||(38631334-38631451)
chr2 (157-275)||(38781760-38781877)
chr2 (158-275)||(6573741-6573858)
chr2 (157-208)||(24576429-24576480)
chr2 (176-275)||(31800485-31800583)
chr2 (157-275)||(13963613-13963730)
chr2 (83-275)||(19115439-19115625)
chr2 (168-239)||(19643372-19643440)
chr2 (106-207)||(22524545-22524646)
chr2 (169-275)||(45086738-45086843)
chr2 (154-275)||(10009371-10009490)
chr2 (159-275)||(23183984-23184099)
chr2 (159-275)||(23595241-23595356)
chr2 (168-275)||(9014971-9015077)
chr2 (76-146)||(10896170-10896240)
chr2 (159-241)||(24793622-24793704)
chr2 (168-275)||(24850269-24850375)
chr2 (157-239)||(22187758-22187839)
chr2 (157-275)||(24377449-24377566)
chr2 (157-275)||(31967649-31967769)
chr2 (92-239)||(33705698-33705842)
chr2 (157-275)||(34321505-34321622)
chr2 (159-275)||(18703160-18703273)
chr2 (163-207)||(27639971-27640015)
chr2 (157-274)||(30667369-30667485)
chr2 (158-275)||(31327559-31327675)
chr2 (158-275)||(31334280-31334396)
chr2 (169-208)||(3277384-3277423)
chr2 (106-239)||(19320086-19320216)
chr2 (86-275)||(22272447-22272630)
chr2 (168-199)||(22683771-22683802)
chr2 (157-208)||(23235387-23235438)
chr2 (157-208)||(40332462-40332513)
chr2 (158-208)||(22802855-22802905)
chr2 (217-275)||(25196351-25196408)
chr2 (168-206)||(26712920-26712958)
chr2 (157-206)||(21910796-21910845)
chr2 (158-207)||(22260786-22260835)
chr2 (170-199)||(27940347-27940376)
chr2 (162-207)||(33241002-33241047)
chr2 (162-207)||(33248923-33248968)
chr2 (217-277)||(10896051-10896110)
chr2 (82-130)||(25829418-25829466)
chr2 (176-208)||(33074642-33074674)
chr2 (157-205)||(44366816-44366864)
[»] scaffold0522 (2 HSPs)
scaffold0522 (85-275)||(3875-4061)
scaffold0522 (85-275)||(11158-11344)
[»] scaffold0916 (1 HSPs)
scaffold0916 (83-279)||(2244-2436)
[»] scaffold0490 (1 HSPs)
scaffold0490 (76-275)||(7631-7826)
[»] chr5 (50 HSPs)
chr5 (76-275)||(23590031-23590227)
chr5 (93-275)||(20969508-20969686)
chr5 (91-275)||(22403754-22403934)
chr5 (148-276)||(26251445-26251572)
chr5 (106-275)||(20237076-20237242)
chr5 (78-275)||(34638769-34638964)
chr5 (60-265)||(13692667-13692862)
chr5 (71-275)||(26119475-26119667)
chr5 (86-263)||(25096472-25096644)
chr5 (86-263)||(25154442-25154614)
chr5 (158-275)||(33023030-33023147)
chr5 (60-205)||(2152645-2152786)
chr5 (100-275)||(18672380-18672552)
chr5 (157-275)||(17815349-17815466)
chr5 (157-275)||(23412645-23412762)
chr5 (157-275)||(19535939-19536056)
chr5 (158-275)||(6512103-6512219)
chr5 (60-199)||(27057561-27057698)
chr5 (168-275)||(12352474-12352580)
chr5 (106-238)||(26118330-26118459)
chr5 (157-275)||(31588682-31588796)
chr5 (217-275)||(39798582-39798639)
chr5 (157-275)||(7745301-7745418)
chr5 (157-275)||(21910909-21911026)
chr5 (158-275)||(4887389-4887505)
chr5 (158-275)||(14086193-14086308)
chr5 (157-208)||(15517354-15517405)
chr5 (179-272)||(27275887-27275976)
chr5 (157-208)||(28139955-28140006)
chr5 (157-208)||(30743394-30743445)
chr5 (168-275)||(642348-642454)
chr5 (168-275)||(21198691-21198797)
chr5 (157-206)||(16607903-16607952)
chr5 (217-266)||(19749910-19749958)
chr5 (157-275)||(20551244-20551361)
chr5 (158-275)||(42244080-42244195)
chr5 (176-208)||(6499623-6499655)
chr5 (168-208)||(9398465-9398505)
chr5 (168-208)||(21099411-21099451)
chr5 (158-275)||(26784723-26784839)
chr5 (157-208)||(25929881-25929932)
chr5 (157-208)||(28464049-28464100)
chr5 (217-275)||(5430302-5430360)
chr5 (157-207)||(9089295-9089345)
chr5 (158-208)||(33933685-33933735)
chr5 (76-124)||(20568060-20568106)
chr5 (93-205)||(20575714-20575827)
chr5 (157-205)||(21071964-21072012)
chr5 (176-208)||(29138112-29138144)
chr5 (176-208)||(35931715-35931747)
[»] chr8 (53 HSPs)
chr8 (60-275)||(26833338-26833549)
chr8 (76-275)||(12194175-12194369)
chr8 (76-275)||(12438603-12438797)
chr8 (83-276)||(17916486-17916667)
chr8 (83-208)||(19707815-19707937)
chr8 (168-275)||(23192261-23192364)
chr8 (126-275)||(23352745-23352892)
chr8 (76-266)||(1208353-1208537)
chr8 (83-275)||(22461282-22461468)
chr8 (87-275)||(18772945-18773126)
chr8 (159-275)||(19956004-19956119)
chr8 (157-275)||(22710962-22711076)
chr8 (76-239)||(23772673-23772830)
chr8 (157-269)||(17525392-17525503)
chr8 (157-275)||(18719344-18719458)
chr8 (157-277)||(19156560-19156678)
chr8 (157-276)||(17914837-17914954)
chr8 (157-275)||(29693695-29693812)
chr8 (157-275)||(36105606-36105723)
chr8 (158-273)||(45538113-45538227)
chr8 (157-239)||(1238047-1238128)
chr8 (158-275)||(3597985-3598101)
chr8 (157-275)||(16680962-16681079)
chr8 (157-275)||(20382052-20382169)
chr8 (157-275)||(22745848-22745965)
chr8 (157-266)||(17702104-17702212)
chr8 (158-239)||(18680177-18680257)
chr8 (76-269)||(19505135-19505317)
chr8 (82-208)||(33083168-33083293)
chr8 (157-208)||(17441545-17441596)
chr8 (106-266)||(17689654-17689809)
chr8 (176-275)||(16189396-16189494)
chr8 (158-208)||(17797801-17797851)
chr8 (157-207)||(18120847-18120897)
chr8 (158-275)||(23263259-23263373)
chr8 (109-243)||(24635677-24635809)
chr8 (217-275)||(43645225-43645282)
chr8 (157-196)||(2811198-2811237)
chr8 (157-208)||(6408097-6408148)
chr8 (157-208)||(18320913-18320964)
chr8 (157-208)||(19927424-19927475)
chr8 (157-208)||(19943615-19943666)
chr8 (159-238)||(29379969-29380048)
chr8 (157-208)||(40845092-40845143)
chr8 (217-275)||(18685068-18685126)
chr8 (217-275)||(18730633-18730691)
chr8 (158-208)||(30421165-30421215)
chr8 (176-246)||(13430319-13430388)
chr8 (159-196)||(23783918-23783955)
chr8 (60-199)||(12541885-12542022)
chr8 (176-208)||(22663549-22663581)
chr8 (176-208)||(22674196-22674228)
chr8 (176-208)||(24832777-24832809)
[»] chr7 (71 HSPs)
chr7 (76-275)||(14304045-14304240)
chr7 (76-275)||(16412321-16412517)
chr7 (60-263)||(9063854-9064051)
chr7 (71-275)||(16307397-16307586)
chr7 (104-275)||(18361302-18361470)
chr7 (133-275)||(5035667-5035805)
chr7 (157-275)||(2913280-2913397)
chr7 (157-275)||(9069955-9070072)
chr7 (86-275)||(7487539-7487725)
chr7 (83-275)||(9097899-9098086)
chr7 (157-275)||(18047575-18047689)
chr7 (157-277)||(5000511-5000630)
chr7 (157-275)||(10882833-10882949)
chr7 (157-272)||(12366414-12366526)
chr7 (157-275)||(13303203-13303319)
chr7 (157-275)||(22577679-22577796)
chr7 (157-275)||(44467432-44467549)
chr7 (83-208)||(13880907-13881029)
chr7 (106-207)||(4549970-4550072)
chr7 (116-205)||(12222202-12222291)
chr7 (157-275)||(13137583-13137700)
chr7 (157-275)||(13692722-13692839)
chr7 (157-275)||(13730369-13730486)
chr7 (157-275)||(28409416-28409533)
chr7 (157-275)||(30026273-30026390)
chr7 (173-271)||(16307196-16307291)
chr7 (106-239)||(9762979-9763109)
chr7 (161-277)||(13880490-13880605)
chr7 (156-275)||(16556465-16556583)
chr7 (156-275)||(16609079-16609197)
chr7 (106-242)||(1877957-1878090)
chr7 (67-275)||(13172064-13172254)
chr7 (157-275)||(2500407-2500524)
chr7 (157-275)||(11319787-11319903)
chr7 (157-275)||(13649081-13649198)
chr7 (157-275)||(15088871-15088988)
chr7 (168-243)||(15304943-15305015)
chr7 (157-239)||(16316271-16316352)
chr7 (157-275)||(23279699-23279816)
chr7 (157-205)||(9396648-9396696)
chr7 (158-239)||(9709529-9709609)
chr7 (82-130)||(11319721-11319769)
chr7 (158-275)||(33606069-33606185)
chr7 (83-208)||(48800366-48800482)
chr7 (157-208)||(2265256-2265307)
chr7 (157-208)||(13031812-13031863)
chr7 (157-208)||(27872079-27872130)
chr7 (176-275)||(12173983-12174081)
chr7 (113-205)||(19417524-19417615)
chr7 (158-208)||(48062553-48062603)
chr7 (158-275)||(14426896-14427012)
chr7 (158-276)||(30944016-30944133)
chr7 (157-239)||(33691421-33691502)
chr7 (83-273)||(4494790-4494970)
chr7 (159-239)||(11086700-11086780)
chr7 (157-238)||(13018220-13018300)
chr7 (160-208)||(24794464-24794512)
chr7 (157-208)||(29935102-29935154)
chr7 (145-207)||(9065810-9065873)
chr7 (176-275)||(16111541-16111640)
chr7 (158-266)||(48236605-48236710)
chr7 (176-239)||(8183349-8183412)
chr7 (176-275)||(15700949-15701047)
chr7 (157-207)||(16422890-16422940)
chr7 (173-207)||(16813270-16813304)
chr7 (217-275)||(23390688-23390746)
chr7 (158-208)||(32264448-32264498)
chr7 (82-130)||(2913415-2913463)
chr7 (170-206)||(7185306-7185342)
chr7 (145-205)||(11016324-11016384)
chr7 (82-130)||(13880420-13880468)
[»] scaffold0388 (2 HSPs)
scaffold0388 (60-275)||(4708-4919)
scaffold0388 (217-275)||(5793-5850)
[»] scaffold0003 (2 HSPs)
scaffold0003 (76-275)||(1033-1229)
scaffold0003 (157-207)||(11602-11652)
[»] chr4 (62 HSPs)
chr4 (83-275)||(10250136-10250325)
chr4 (99-275)||(19888751-19888924)
chr4 (99-265)||(16324143-16324306)
chr4 (83-275)||(11901530-11901717)
chr4 (83-275)||(12417223-12417412)
chr4 (60-207)||(14902168-14902313)
chr4 (71-275)||(21350231-21350429)
chr4 (76-275)||(2652041-2652234)
chr4 (157-275)||(14356777-14356891)
chr4 (83-275)||(17540733-17540919)
chr4 (83-275)||(17787648-17787834)
chr4 (83-208)||(6641995-6642117)
chr4 (76-275)||(20577533-20577726)
chr4 (157-269)||(45833775-45833887)
chr4 (83-272)||(11916035-11916218)
chr4 (106-275)||(17812014-17812178)
chr4 (157-260)||(14833772-14833874)
chr4 (157-276)||(37435135-37435253)
chr4 (157-275)||(40846464-40846582)
chr4 (173-275)||(54680292-54680393)
chr4 (157-275)||(19620707-19620824)
chr4 (158-276)||(55732174-55732291)
chr4 (158-275)||(3498013-3498129)
chr4 (159-275)||(10660797-10660910)
chr4 (159-275)||(10874942-10875055)
chr4 (176-275)||(29121772-29121870)
chr4 (158-276)||(9141242-9141359)
chr4 (158-275)||(17398292-17398409)
chr4 (114-207)||(23087964-23088057)
chr4 (158-239)||(13575796-13575876)
chr4 (176-275)||(10693252-10693350)
chr4 (176-275)||(10907018-10907116)
chr4 (157-208)||(14904000-14904051)
chr4 (168-276)||(22089925-22090032)
chr4 (157-204)||(56034938-56034985)
chr4 (154-208)||(3396002-3396056)
chr4 (157-207)||(19809935-19809985)
chr4 (157-207)||(19818927-19818977)
chr4 (158-208)||(19911621-19911671)
chr4 (157-268)||(25650760-25650871)
chr4 (83-275)||(41114363-41114550)
chr4 (157-239)||(14604558-14604639)
chr4 (226-275)||(14867219-14867267)
chr4 (168-238)||(15139618-15139688)
chr4 (60-275)||(18776265-18776467)
chr4 (158-207)||(29680241-29680290)
chr4 (158-239)||(3793470-3793550)
chr4 (157-208)||(3105131-3105182)
chr4 (157-208)||(12810875-12810926)
chr4 (83-130)||(12810944-12810991)
chr4 (157-208)||(14571408-14571459)
chr4 (145-207)||(24619908-24619970)
chr4 (158-208)||(38514255-38514305)
chr4 (176-208)||(1672812-1672844)
chr4 (176-208)||(1675287-1675319)
chr4 (82-130)||(3395939-3395987)
chr4 (176-208)||(8106064-8106096)
chr4 (82-130)||(12601414-12601462)
chr4 (176-208)||(16940366-16940398)
chr4 (176-208)||(17247658-17247690)
chr4 (82-130)||(19620842-19620890)
chr4 (158-206)||(22675234-22675282)
[»] scaffold0351 (1 HSPs)
scaffold0351 (76-275)||(8912-9105)
[»] scaffold0011 (1 HSPs)
scaffold0011 (42-275)||(59802-60034)
[»] scaffold0758 (1 HSPs)
scaffold0758 (76-275)||(4551-4744)
[»] scaffold0074 (1 HSPs)
scaffold0074 (60-275)||(31906-32115)
[»] scaffold0002 (2 HSPs)
scaffold0002 (60-275)||(112471-112680)
scaffold0002 (60-275)||(116081-116288)
[»] scaffold0201 (1 HSPs)
scaffold0201 (76-206)||(19353-19483)
[»] scaffold0040 (2 HSPs)
scaffold0040 (93-273)||(3642-3818)
scaffold0040 (106-275)||(1110-1272)
[»] scaffold0078 (1 HSPs)
scaffold0078 (60-275)||(31377-31587)
[»] scaffold0020 (1 HSPs)
scaffold0020 (83-275)||(145185-145370)
[»] scaffold0081 (1 HSPs)
scaffold0081 (86-275)||(40968-41152)
[»] scaffold0035 (3 HSPs)
scaffold0035 (104-277)||(30155-30321)
scaffold0035 (157-275)||(19082-19199)
scaffold0035 (176-208)||(98849-98881)
[»] scaffold0043 (2 HSPs)
scaffold0043 (77-198)||(25388-25507)
scaffold0043 (93-260)||(1536-1703)
[»] scaffold0037 (1 HSPs)
scaffold0037 (158-273)||(87283-87396)
[»] scaffold0018 (2 HSPs)
scaffold0018 (157-275)||(52891-53008)
scaffold0018 (157-275)||(56843-56960)
[»] scaffold1782 (2 HSPs)
scaffold1782 (168-275)||(738-843)
scaffold1782 (176-275)||(633-731)
[»] scaffold0622 (2 HSPs)
scaffold0622 (83-277)||(2965-3155)
scaffold0622 (217-275)||(1511-1568)
[»] scaffold0047 (2 HSPs)
scaffold0047 (83-276)||(10189-10377)
scaffold0047 (157-260)||(30606-30708)
[»] scaffold0009 (1 HSPs)
scaffold0009 (73-275)||(269034-269228)
[»] scaffold1050 (1 HSPs)
scaffold1050 (164-275)||(1314-1421)
[»] scaffold0337 (1 HSPs)
scaffold0337 (161-277)||(15051-15166)
[»] scaffold0120 (2 HSPs)
scaffold0120 (157-275)||(36384-36501)
scaffold0120 (157-275)||(42504-42621)
[»] scaffold0273 (1 HSPs)
scaffold0273 (104-199)||(8169-8262)
[»] scaffold0251 (1 HSPs)
scaffold0251 (158-278)||(8076-8195)
[»] scaffold0092 (1 HSPs)
scaffold0092 (106-275)||(8371-8536)
[»] scaffold0022 (3 HSPs)
scaffold0022 (83-208)||(159388-159509)
scaffold0022 (157-208)||(39797-39848)
scaffold0022 (157-208)||(137857-137908)
[»] scaffold0015 (1 HSPs)
scaffold0015 (157-277)||(61192-61311)
[»] scaffold0411 (1 HSPs)
scaffold0411 (157-272)||(12596-12709)
[»] scaffold0056 (2 HSPs)
scaffold0056 (105-206)||(35853-35951)
scaffold0056 (158-239)||(25300-25380)
[»] scaffold0005 (3 HSPs)
scaffold0005 (157-260)||(5825-5927)
scaffold0005 (157-239)||(212739-212820)
scaffold0005 (157-208)||(245917-245968)
[»] scaffold0471 (1 HSPs)
scaffold0471 (157-275)||(3723-3840)
[»] scaffold0359 (1 HSPs)
scaffold0359 (157-275)||(5299-5416)
[»] scaffold0334 (1 HSPs)
scaffold0334 (157-275)||(10179-10296)
[»] scaffold0026 (3 HSPs)
scaffold0026 (157-275)||(8282-8399)
scaffold0026 (157-207)||(60401-60451)
scaffold0026 (176-275)||(115924-116022)
[»] scaffold0025 (1 HSPs)
scaffold0025 (107-208)||(74908-75006)
[»] scaffold0488 (1 HSPs)
scaffold0488 (158-208)||(11278-11328)
[»] scaffold0479 (1 HSPs)
scaffold0479 (157-276)||(10323-10441)
[»] scaffold1359 (1 HSPs)
scaffold1359 (158-275)||(297-413)
[»] scaffold0426 (1 HSPs)
scaffold0426 (157-275)||(13997-14114)
[»] scaffold0395 (1 HSPs)
scaffold0395 (157-275)||(13142-13259)
[»] scaffold0066 (1 HSPs)
scaffold0066 (157-275)||(60493-60610)
[»] scaffold0004 (1 HSPs)
scaffold0004 (83-275)||(243864-244044)
[»] scaffold0683 (1 HSPs)
scaffold0683 (60-207)||(624-771)
[»] scaffold0527 (2 HSPs)
scaffold0527 (157-208)||(257-308)
scaffold0527 (157-208)||(8320-8371)
[»] scaffold0249 (1 HSPs)
scaffold0249 (157-208)||(17445-17496)
[»] scaffold0217 (2 HSPs)
scaffold0217 (157-208)||(21789-21840)
scaffold0217 (176-275)||(19439-19537)
[»] scaffold0193 (1 HSPs)
scaffold0193 (157-208)||(16167-16218)
[»] scaffold0176 (1 HSPs)
scaffold0176 (157-208)||(9569-9620)
[»] scaffold0498 (1 HSPs)
scaffold0498 (168-275)||(2962-3065)
[»] scaffold0439 (1 HSPs)
scaffold0439 (157-275)||(6316-6433)
[»] scaffold0227 (1 HSPs)
scaffold0227 (157-275)||(23046-23163)
[»] scaffold0084 (1 HSPs)
scaffold0084 (157-275)||(49703-49820)
[»] scaffold0023 (1 HSPs)
scaffold0023 (157-206)||(103942-103991)
[»] scaffold0888 (1 HSPs)
scaffold0888 (136-208)||(3808-3879)
[»] scaffold0161 (1 HSPs)
scaffold0161 (83-130)||(9880-9927)
[»] scaffold1709 (1 HSPs)
scaffold1709 (176-239)||(4-66)
[»] scaffold1331 (1 HSPs)
scaffold1331 (176-239)||(255-317)
[»] scaffold0771 (1 HSPs)
scaffold0771 (157-207)||(861-911)
[»] scaffold0452 (1 HSPs)
scaffold0452 (158-208)||(1542-1592)
[»] scaffold0045 (1 HSPs)
scaffold0045 (158-208)||(87274-87324)
[»] scaffold0414 (1 HSPs)
scaffold0414 (159-208)||(6810-6859)
[»] scaffold0485 (1 HSPs)
scaffold0485 (247-279)||(8981-9013)
[»] scaffold0211 (1 HSPs)
scaffold0211 (176-208)||(27747-27779)


Alignment Details
Target: chr1 (Bit Score: 139; Significance: 1e-72; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 43 - 258
Target Start/End: Original strand, 9658946 - 9659161
Alignment:
Q  43 tcttcagacgttatctccttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaat 142  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| |||||||||||||| |||||||||||    
T  9658946 tcttcagacgttatcttcttcagactctatcttgcaacataagtttcctttttgtaaattgcattgatctcatgtgttcttccagaacctatacttgaat 9659045  T
Q  143 taaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaa 242  Q
    || ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||    
T  9659046 tatagatatttaattttttgtctaaggtcatgcacacttgaacaaatattagcatatccaattgacatatttttaataccttgttatcatcaaaacttaa 9659145  T
Q  243 ggatggtaatgttaaa 258  Q
    || || ||||||||||    
T  9659146 gggtgttaatgttaaa 9659161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 275
Target Start/End: Complemental strand, 18129793 - 18129615
Alignment:
Q  93 tttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatatt 192  Q
    |||| |||||||||||||||||||||||||| ||||||  ||||||||||||||||| | ||| |||| ||||| |||| ||||||||| ||||||||||    
T  18129793 tttgaaaatttcattgctctcatttgttctttcagaaccaatacttgaattaaagacttataaattttagtctatggtcctgcacacttaaacaaatatt 18129694  T
Q  193 agcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||  |||||||        |||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  18129693 agcatatctaattgac---attttaataccttattatcatcaaagcttaagg-tggtaatgttaaacacattttgttccaaca 18129615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 83 - 274
Target Start/End: Complemental strand, 1090313 - 1090123
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttga---attaaagacatttaactttttgtctaaggtcatgcacac 179  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||| | ||| |||||   | |||||||| |||| |||||||||| ||||||||||||    
T  1090313 aagctccctttttgtaaattccattgctctcatttgttcttctagaccttatgcttgatataataaagacacttaaatttttgtctatggtcatgcacac 1090214  T
Q  180 ttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaac 274  Q
    |||||||||||||||||||| ||||||||        |||||||||||||||||||| || ||  | | |||||||||||||||||| |||||||    
T  1090213 ttgaacaaatattagcatatccaattgac--atttttaataccttgttatcatcaaagctcaa--aggataatgttaaacacattttgttccaac 1090123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 372
Target Start/End: Original strand, 9659363 - 9659447
Alignment:
Q  288 atttatcaattgtgattcatgagtagttaagtgaagagaaattcaataaatataaatatattagttgtaagagaaatgttgtatt 372  Q
    |||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  9659363 atttattaattgtgattaatgagtagttaagtaaagagaaattcaataaatatgaatatattagttgtaaaagaaatgttgtatt 9659447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 275
Target Start/End: Complemental strand, 16478525 - 16478347
Alignment:
Q  93 tttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatatt 192  Q
    ||||||||||   |||||||||||||||||||||||||  |||| |   |||| ||| | ||| |||||||||| |||| ||||||||||||||||||||    
T  16478525 tttgtaaattcatttgctctcatttgttcttccagaaccaataccttgtttaaggacttataaatttttgtctatggtcttgcacacttgaacaaatatt 16478426  T
Q  193 agcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||| ||||||| |       ||||||||||||||||| || ||||||| ||| ||||||||||||||||| ||||||||    
T  16478425 agcatatccaattgaac---ttttaataccttgttatcatctaagcttaagg-tggcaatgttaaacacattttgttccaaca 16478347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 23054633 - 23054764
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagaca-tttaactttttgtctaaggtcatg 174  Q
    |||||| |||||||| |||||||||||  |||| ||||||||||||||||||| | ||| ||||||||||||||| || || |||||||||| |||| ||    
T  23054633 gcaacacaagcttcccttttgtaaattatattgttctcatttgttcttccagaccctatgcttgaattaaagacacttaaattttttgtctatggtcctg 23054732  T
Q  175 cacacttgaacaaatattagcatattcaattg 206  Q
    ||||||  ||||||||||||||||| ||||||    
T  23054733 cacactaaaacaaatattagcatatccaattg 23054764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 71 - 276
Target Start/End: Original strand, 16870264 - 16870456
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| |||||| | |||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||        |||   |||| ||| |||    
T  16870264 atcttgcaacacacgcttccttgttgtaaatttcattgctctcatttgttctttcagaacctatacttgaatta--------taa---tttgactatggt 16870352  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
      ||||||||||||||||||||| ||||| ||||||||        |||| ||||||||||||||||||||| | |  ||||| |||||||||||| |||    
T  16870353 tctgcacacttgaacaaatattaacatatccaattgac--atttttaatatcttgttatcatcaaaacttaaaggtaataatggtaaacacattttgttc 16870450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 33256047 - 33255930
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  |||||  | ||||||||    
T  33256047 tttttgtctatggtcatgcacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaatccttaa--agggtaatgt 33255951  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  33255950 taaacacattttgttccaaca 33255930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 33276219 - 33276102
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  |||||  | ||||||||    
T  33276219 tttttgtctatggtcatgcacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaatccttaa--agggtaatgt 33276123  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  33276122 taaacacattttgttccaaca 33276102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 275
Target Start/End: Complemental strand, 18896346 - 18896162
Alignment:
Q  85 gcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaa 184  Q
    |||||||| ||||  ||| ||||||||||||||||||||||||||| |||  || ||  | | |||   || |||||||||| |||| ||||||||| ||    
T  18896346 gcttccttcttgttgattccattgctctcatttgttcttccagaacctatgatttaaagagacaca---aaatttttgtctatggtcctgcacacttaaa 18896250  T
Q  185 caaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||| ||||||||||||||||| |       ||||||||||||||||||||||| ||  | | |||||||||||||||||| ||||||||    
T  18896249 caaattttagcatattcaattga-caatttttaataccttgttatcatcaaaactcaa--aggataatgttaaacacattttgttccaaca 18896162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 275
Target Start/End: Complemental strand, 18516982 - 18516773
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||||||||| ||| ||||||||||||||  |||||||  ||  ||||||||| ||||||||| | || |  ||||||||||| |||||   ||| |||    
T  18516982 cttcagactctctcttgcaacataagcttc--ttttgtagtttctattgctctcttttgttctttcggagccaatacttgaatttaagactaataaattt 18516885  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| | ||||| |||||||||||||| ||||||  | ||||||||        ||||| ||||||||||||||| |||| | ||||||||||||||    
T  18516884 ttgtctatgatcatgtacacttgaacaaattttagcaattccaattgac---attttaatactttgttatcatcaaaagttaaag-tggtaatgttaaac 18516789  T
Q  260 acattttattccaaca 275  Q
     |||||| ||||||||    
T  18516788 tcattttgttccaaca 18516773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 20109742 - 20109545
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagaca-tttaactttttgtctaaggtcatg 174  Q
    |||||| |||||||||||||||| ||| ||||| ||||||||||||||||||||| ||| ||| | ||| ||| | || || ||||||| || |||  ||    
T  20109742 gcaacacaagcttcctttttgtagattccattgttctcatttgttcttccagaacctatgcttaatttatagatacttaaattttttgtttatggtactg 20109643  T
Q  175 cacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaac 274  Q
    |||| |||||||||||||||||||| || | |||        |||| |||||||||||||||||| || | ||||| ||| ||||||||| |||||||||    
T  20109642 cacatttgaacaaatattagcatatccactagac--atttttaatatcttgttatcatcaaaactcaaag-tggtattgtcaaacacattatattccaac 20109546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 20909744 - 20909931
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||| ||||||| |||   ||||| ||||||||||||| || || ||| ||| | ||||||||| | || |||||||||| |||  |||||| |||    
T  20909744 aagcttccattttgtagattcacttgctttcatttgttcttc-agtacctatgctttatttaaagacactcaaatttttgtctatggttctgcacagttg 20909842  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||| |         ||||||||||||||||||||||| ||  | |||||||||||||||||||| ||||||||    
T  20909843 aacaaatattagcatatccaattaa--tatttttaataccttgttatcatcaaaactcaa--agggtaatgttaaacacattttgttccaaca 20909931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 274
Target Start/End: Complemental strand, 21683021 - 21682811
Alignment:
Q  62 tcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagac-atttaactttt 160  Q
    |||||||| | || |||||||| |||||||||  ||||||| ||||  |||| ||||||||| ||||||  ||||||   || ||||| | | || ||||    
T  21683021 tcagactcaaacttgcaacatatgcttccttt--gtaaattccattattctcttttgttctttcagaaccaatactttgttttaagactaataaaatttt 21682924  T
Q  161 tgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaaca 260  Q
     ||||| |||| | ||||||| ||||||||||||||||| ||||||||        ||||| |||||||||||||||||||||| ||  |||||||||||    
T  21682923 agtctatggtcctacacactttaacaaatattagcatatccaattgactttataataatactttgttatcatcaaaacttaagg-tgacaatgttaaaca 21682825  T
Q  261 cattttattccaac 274  Q
    |||||| |||||||    
T  21682824 cattttgttccaac 21682811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 18615227 - 18615415
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||      ||| ||| |||||||||||  ||| |||||||| | |||| | |    
T  18615227 gcaacttaagcttcctttttgtagattccactgctctcatttgttcttcc------tatgctttaattaaagaca-ctaaatttttgtccatggtcctac 18615319  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||||||  |||||||        ||||| ||||||||||||||||| ||  | ||||||  |||||||||||| ||||||||    
T  18615320 acacttgaacaaatattagcatatctaattgac--atttttaatacattgttatcatcaaaactcaa--agggtaataataaacacattttgttccaaca 18615415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 10757789 - 10757906
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  10757789 tttttgtctatggtcatgtacactttaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaactcttaaagggtaatgtta 10757887  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| || |||||    
T  10757888 aacacattttgtttcaaca 10757906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 23036212 - 23036095
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  23036212 tttttgtctatggtcttgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 23036114  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  23036113 aacacattttgttccaaca 23036095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 30893447 - 30893564
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||| || || ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  30893447 tttttgtctatggtcatgtacacttgaacaaatattaacaaatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 30893545  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||||||||||||    
T  30893546 aacacattttattccaaca 30893564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 24227755 - 24227598
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||| |||||| ||| |||   ||||| |||  ||| |||||||||| | || |||    
T  24227755 gcaacacaagcttcctttttgtagattccattgctctcatttgttctt-cagaacctatgctt---ttaaacaca-ctaaatttttgtctatgctcctgc 24227661  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||||||||||||  |||| ||||| | |       |||||||||||||||||||||||    
T  24227660 acacttgaacaaatattaatatatccaatt-aacaatttttaataccttgttatcatcaaaact 24227598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 48704520 - 48704701
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||| |||||||  |||||||||||||| |||||||||||||||| ||         |||||| ||  || |||||||||| ||||||| |||||||    
T  48704520 aagcttcatttttgttgatttcattgctctcttttgttcttccagaacctaa--------taaagatatcaaa-tttttgtctatggtcatgtacacttg 48704610  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| |||||||         |||||||||||||||||||||||     | | |||||||||||||||||| ||||||||    
T  48704611 aacaaatattagcatatccaattga--aaattttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 48704701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 26701829 - 26701723
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    |||| ||||||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||||||||||||     
T  26701829 ggtcctgcacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttg 26701731  T
Q  268 ttccaaca 275  Q
    ||||||||    
T  26701730 ttccaaca 26701723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 2268913 - 2269030
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||||    | | ||||||||    
T  2268913 tttttgtctattgtcttgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaacttttaaaggataatgtta 2269011  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  2269012 aacacattttgttccaaca 2269030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 21191640 - 21191454
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| || ||||||| |||||||||||||||| | ||||| || || | ||   ||| ||||||| || |||| |||||| |||    
T  21191640 aagcttccttcttgttgattccaatgctctcgtttgttcttccagaacct-tactttaaatagacac---taaatttttgtatatggtcctgcacatttg 21191545  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||||| |       |||||||||||||| ||||||||| |  | |||||||||| ||||||||| ||||||||    
T  21191544 aacaaatattagcatatccaattga-caatttttaataccttgttatcctcaaaacttta-aagggtaatgttagacacattttgttccaaca 21191454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 22599876 - 22599758
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || ||||||||| || ||||||||||| ||||||||        ||||||||||||||||||||||||    | ||||||||||    
T  22599876 tttttgtctatggtcctgtacacttgaataagtattagcatatccaattgacaattttttaataccttgttatcatcaaaactttcaaagggtaatgtta 22599777  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| || |||||    
T  22599776 aacacattttgtttcaaca 22599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 36134559 - 36134676
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||| ||||| ||||||| |       ||||| |||||||||||||||||    || ||||||||||    
T  36134559 tttttgtctatggtcctgtacacttgaacaaatattaacatatccaattga-caatttttaatactttgttatcatcaaaactatcagagggtaatgtta 36134657  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  36134658 aacacattttgttccaaca 36134676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 38282968 - 38283049
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  38282968 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 38283049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 273
Target Start/End: Complemental strand, 16235006 - 16234891
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| |||||||         |||||||||||||||||||||||     | ||||||||||    
T  16235006 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-taatttttaataccttgttatcatcaaaactcttaaagggtaatgtta 16234908  T
Q  257 aacacattttattccaa 273  Q
    |||||||||| ||||||    
T  16234907 aacacattttgttccaa 16234891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 21617036 - 21617086
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  21617036 tttttatctatggtcctgcacacttgaacaaatattagcatattcaattga 21617086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 1578218 - 1578335
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| |  |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||| ||||    
T  1578218 tttttgtctatggtcctatacacttgaacaaatattagcatatccaattga-cattttttaataccttgttatcatcaaaactctcaaagggtaacgtta 1578316  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  1578317 aacacattttgttccaaca 1578335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 22201529 - 22201412
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || ||||||||| |||||||||||||| ||||||| |       |||||||| ||||||||||||||     | ||||||||||    
T  22201529 tttttgtctatggtcctgtacacttgaaaaaatattagcatatccaattga-caatttttaatacctttttatcatcaaaactctcaaagggtaatgtta 22201431  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  22201430 aacacattttgttccaaca 22201412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 9347668 - 9347723
Alignment:
Q  219 taccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||| || |||||    
T  9347668 taccttgttatcatcaaaacttaagg-tggtaatgttaaacatattttgttacaaca 9347723  T

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Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 30572553 - 30572604
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  ||| || |||||||||||||||||||||||||||||||||    
T  30572553 tttttgtctatagtcttggacacttgaacaaatattagcatattcaattgac 30572604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 2327083 - 2327021
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||    
T  2327083 acacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaact 2327021  T

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Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 9658862 - 9658900
Alignment:
Q  12 aagaaaatgatgaactccagcttttgatggttcttcaga 50  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  9658862 aagaaaatgatgaacttcagcttttgatggttcttcaga 9658900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 22154259 - 22154308
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    |||||||||| ||||||| ||||||||| |||||||||||||| ||||||    
T  22154259 tttttgtctatggtcatgtacacttgaataaatattagcatatccaattg 22154308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 25399669 - 25399770
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||| ||||||||||  |||||  ||||||   || ||||||| ||| |||| ||||| | ||||| |||||||||||| ||||||||||| |||||    
T  25399669 ttgctctaatttgttcttatagaaccaatactttgttttaagacatataaattttagtctatgatcatgtacacttgaacaagtattagcatatccaatt 25399768  T
Q  206 ga 207  Q
    ||    
T  25399769 ga 25399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 25448065 - 25447984
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  25448065 tttttgtctattgtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 25447984  T

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Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 26279826 - 26279741
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaa-ttaaagacatttaactttttgtctaaggtcatgcacacttgaacaaata 190  Q
    |||||||| ||||||||| ||||||  ||||||||| |||| ||| | ||| |||||||||| |||| |||| |||||||||||||    
T  26279826 ttgctctcttttgttctttcagaaccaatacttgaaattaaggacttataaatttttgtctatggtcctgcatacttgaacaaata 26279741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 12398137 - 12398173
Alignment:
Q  169 gtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    |||||||||||||||||| ||||||||||||||||||    
T  12398137 gtcatgcacacttgaacatatattagcatattcaatt 12398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 19018836 - 19018800
Alignment:
Q  170 tcatgcacacttgaacaaatattagcatattcaattg 206  Q
    ||||||||||||||||||||||||| |||||||||||    
T  19018836 tcatgcacacttgaacaaatattagtatattcaattg 19018800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 19717890 - 19717998
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||| ||||| ||||||| |       ||| |||||||||||||||||| |    | ||||||||||    
T  19717890 tttttgtctatggtcctgtacacttgaacaaatattaacatatccaattga-caatttttaattccttgttatcatcaaaaccttcaaagggtaatgtta 19717988  T
Q  257 aacacatttt 266  Q
    ||||||||||    
T  19717989 aacacatttt 19717998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 23065332 - 23065412
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagc-atattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||| ||||||| |||||||||||||||||||| |||| ||||||| |       |||||||||||||||||||||||    
T  23065332 tttgtctatggtcatgtacacttgaacaaatattagcaatatccaattga-caatttttaataccttgttatcatcaaaact 23065412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 31359651 - 31359766
Alignment:
Q  162 gtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacac 261  Q
    ||||| |||| ||||||| ||||||||||||| ||||||||||||| |       ||||||||||||||||||||| | || || || | |||||||| |    
T  31359651 gtctatggtcctgcacacgtgaacaaatattaacatattcaattgaac--tttttaataccttgttatcatcaaaattcaaaga-ggcattgttaaactc 31359747  T
Q  262 attttattccaacagaatg 280  Q
    ||||| |||||||| ||||    
T  31359748 attttgttccaacataatg 31359766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 39200719 - 39200639
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||| |||| || |||||||||||||||||||||||| | ||||| |       |||||||||||||||||||||||    
T  39200719 ttttgtctatggtcctgtacacttgaacaaatattagcatatccgattga-caatttttaataccttgttatcatcaaaact 39200639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 16235071 - 16235024
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  16235071 aagcttcctttttgttgattccattgctctcttttgttcttccagaac 16235024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 17024742 - 17024687
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatactt 138  Q
    |||||||||| ||||  ||| ||||| ||||||||||||||||||||| |||||||    
T  17024742 aagcttccttcttgttgattccattgatctcatttgttcttccagaacctatactt 17024687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 22427053 - 22427002
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||| | |||| || |||||||||||||||||||||||| ||||||||    
T  22427053 tttttgtcaatggtcctgtacacttgaacaaatattagcatatccaattgac 22427002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 26279695 - 26279641
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcca 272  Q
    |||||||| |||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  26279695 aataccttattatcatcaaaatttaag-atggtaaagttaaacacattttgttcca 26279641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 35402204 - 35402321
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||  || |||||||||||||||||||||||| ||||| | |       |||||||||||||||||||| ||     |  |||||||||    
T  35402204 tttttgtctatggttttgtacacttgaacaaatattagcatatccaatt-aacaatttttaataccttgttatcatcaaatctctcaaagagtaatgtta 35402302  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  35402303 aacacattttgttccaaca 35402321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 1900652 - 1900700
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  ||| | |||||||| ||||||||||||||||    
T  1900652 taagcttcctttttgttgattcctttgctctcttttgttcttccagaac 1900700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 10251389 - 10251421
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  10251389 acacttgaacaaatattagcatatccaattgac 10251421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 35040539 - 35040571
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  35040539 acacttgaacaaatattagcatatccaattgac 35040571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 71)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 60 - 275
Target Start/End: Complemental strand, 23005906 - 23005692
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||| ||||||||| |||||| |||||| ||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  23005906 cttcaaactctatcttgcaacacaagctttctttttgtaaattccattgctctcatgtgttcttccagatcctatacttgaattaaagacatttaacttt 23005807  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    |||||||  ||| |||||||||||||||||||||||||||||||| || |       |||||||||||||||||||||||||| | ||||||||||||||    
T  23005806 ttgtctattgtcctgcacacttgaacaaatattagcatattcaataga-cattttttaataccttgttatcatcaaaacttaaaggtggtaatgttaaac 23005708  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  23005707 acattttgttccaaca 23005692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 23782460 - 23782674
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||| ||||||||| |||||| |||||| ||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  23782460 cttcaaactctatcttgcaacacaagctttctttttgtaaattccattgctctcatgtgttcttccagatcctatacttgaattaaagacatttaacttt 23782559  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    |||||||  ||| |||||||||||||||||||||||||||||||| || |       |||||||||||||||||||||||||| | ||||||||||||||    
T  23782560 ttgtctattgtcctgcacacttgaacaaatattagcatattcaataga-cattttttaataccttgttatcatcaaaacttaaaggtggtaatgttaaac 23782658  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  23782659 acattttgttccaaca 23782674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 60 - 273
Target Start/End: Complemental strand, 18171884 - 18171672
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||||||||||| |  ||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18171884 cttcagactctatatttcaacacaagcttgctttttgtaaattccattgctcttatttgttcttccagaacctatacttgaattaaagacatttaacttt 18171785  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    |||||||  | | ||||||||||||||||||||||||||| ||||| | |       |||||||||||||||| ||||||||| | ||||||||||||||    
T  18171784 ttgtctattgccctgcacacttgaacaaatattagcatatccaatt-aacattttttaataccttgttatcataaaaacttaaaggtggtaatgttaaac 18171686  T
Q  260 acattttattccaa 273  Q
    ||||||| ||||||    
T  18171685 acattttgttccaa 18171672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 60 - 273
Target Start/End: Complemental strand, 24718619 - 24718408
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  24718619 cttcatactctatcttgcaacacaagcttcctttttgtaaattttattgctctcatttgttcttccagaacctatacttgaattaaagacatttaacttc 24718520  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    || |||| |||| |||||||||||| |||||||| ||||| ||||||||        |||||||| ||||||||||||||||| | || ||||||||||     
T  24718519 ttatctatggtcttgcacacttgaagaaatattaacatatccaattgac--ttttttaataccttattatcatcaaaacttaaaggtgataatgttaaat 24718422  T
Q  260 acattttattccaa 273  Q
    ||||||| ||||||    
T  24718421 acattttgttccaa 24718408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 60 - 277
Target Start/End: Complemental strand, 24728418 - 24728203
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||     
T  24728418 cttcatactctatcttgcaacacaagcttcctttttgtaaattttattgctctcatttgttcttccacaacctatacttgaattaaagacatttaacttc 24728319  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    || |||| |||| |||||||||||| |||||||||||||| ||||| ||        ||||||||||||| || ||||||||| | || |||||||||||    
T  24728318 ttatctatggtcttgcacacttgaagaaatattagcatatccaattaac--atttttaataccttgttattatgaaaacttaaaggtgataatgttaaac 24728221  T
Q  260 acattttattccaacaga 277  Q
    ||||||| ||||||||||    
T  24728220 acattttgttccaacaga 24728203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 199
Target Start/End: Complemental strand, 17445540 - 17445416
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttc-attgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatg 174  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||| |     
T  17445540 gcaacacaagcttcctttttgtaaaattctattgctctcatttgttcttccagaacatatgcttgaattcaagacatttaaatttttgtctatggtcctt 17445441  T
Q  175 cacacttgaacaaatattagcatat 199  Q
    |||||||||||||||||||||||||    
T  17445440 cacacttgaacaaatattagcatat 17445416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 208
Target Start/End: Complemental strand, 16462510 - 16462356
Alignment:
Q  54 tatctccttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacattt 153  Q
    ||||| ||||| ||| ||||| | ||||  ||||||||||||||||||| |||| |||||||||||||||||||||| |||  ||||  |||||||||||    
T  16462510 tatcttcttcaaactttatcttgtaacacgagcttcctttttgtaaattccattcctctcatttgttcttccagaacctatgtttgatataaagacattt 16462411  T
Q  154 aactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    || |||||||||| |||| | |||| |||||||||||||||||||| ||||||||    
T  16462410 aaatttttgtctatggtccttcacaattgaacaaatattagcatatccaattgac 16462356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 19876084 - 19876297
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||| || |||||| |||||| |||||||||| ||||||| | |||| |||||||||||||||||||||||||| ||||| | |||  ||||||| ||     
T  19876084 cttcatacgctatcttgcaacagaagcttccttcttgtaaaatccatttctctcatttgttcttccagaacatatgcttgattaaaactcatttaaattc 19876183  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||| |||||||||||||||  || | ||||| || |||||    
T  19876184 ttgtctatggtcttgaacacttgaacaaatattagcatatccaattga-cattttttaataccatgttatcatcaaaacacaaag-tggtattgctaaac 19876281  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  19876282 acattttgttccaaca 19876297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 12348436 - 12348625
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||| ||| ||||| ||||||||| | || ||||| |||| |||| |||||| |||    
T  12348436 aagcttcctttttctagatttcattgctctcatttgttcttcgagaacctatgcttgatttaaagacactaaaatttttctctacggtcctgcacagttg 12348535  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |  |||||||||||||| ||||||| |       ||||||||||||||||||||||| ||  | | |||||||||||||||||| ||||||||    
T  12348536 agaaaatattagcatatccaattga-cattttttaataccttgttatcatcaaaactcaa--aggataatgttaaacacattttgttccaaca 12348625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 76 - 276
Target Start/End: Original strand, 25930747 - 25930943
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||| ||||||||||||||||| ||| ||||||||| |||||||||| || ||| ||| ||| | ||||||||||| || |||||||||| ||||||||    
T  25930747 gcaacttaagcttcctttttgtagattccattgctcttatttgttctttcaaaacctatgcttcatttaaagacattcaaatttttgtctatggtcatgc 25930846  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||| ||||||||||||||| |||| ||||| | |       ||||||||||||||| ||||||| ||  | |||||||||||||||||||| ||||||||    
T  25930847 acagttgaacaaatattagtatatccaatt-aacattttttaataccttgttatcaccaaaactcaa--agggtaatgttaaacacatttt-ttccaaca 25930942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 76 - 276
Target Start/End: Original strand, 7812308 - 7812505
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||||||||| |||  |||||| ||||||||||||||||||| ||| |||| ||| |||||||| || |||||||||| |||| |||    
T  7812308 gcaacacaagcttcctttttgtagattcaattgctttcatttgttcttccagaacctatgcttg-atttaagacattcaaatttttgtctatggtcctgc 7812406  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    || |||||||||||||||||||||  |||||| |       ||||| |||||||||| |||||| ||  | |||||||||||||||||||| ||||||||    
T  7812407 acccttgaacaaatattagcatatataattga-cattttttaatactttgttatcattaaaactcaa-aagggtaatgttaaacacattttgttccaaca 7812504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 275
Target Start/End: Original strand, 24398979 - 24399151
Alignment:
Q  99 aatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcata 198  Q
    ||||||||||||||| |||||||||| | |||   |||||||||| ||||  | ||| |||||||||| |||| ||||||||||||||||||||||||||    
T  24398979 aatttcattgctctcttttgttcttctaaaaccattacttgaatttaagatttataaatttttgtctatggtcctgcacacttgaacaaatattagcata 24399078  T
Q  199 ttcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    | ||||| ||        |||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||    
T  24399079 tccaattcac---tttttaataccttgttatcatcaaaacttaagg-tgataatgttaaacacattttgttccaaca 24399151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 208
Target Start/End: Original strand, 32336085 - 32336215
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||||  ||||||| |||||||||||||| |||||||||||| ||| |||||  |||||| |||||| |||||||||| |||| |||    
T  32336085 gcaacacaagcttccttt--gtaaattccattgctctcattttttcttccagaacctatgcttgatctaaagatatttaaatttttgtctatggtcttgc 32336182  T
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||||||||||||||||  |||||||    
T  32336183 acacttgaacaaatattagcatatctaattgac 32336215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 275
Target Start/End: Complemental strand, 31127240 - 31127031
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||||| | || |||||||||||||||||   |||||||  ||||||||| ||||||||| ||||||  |||| |   || ||||| | ||| |||    
T  31127240 cttcagactcaaacttgcaacataagcttcctta--gtaaattcaattgctctcttttgttctttcagaaccaataccttgttttaagacttataaattt 31127143  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    | ||||| |||| |||||||||||||||||| ||||||||  |||||||        |||||||||||||||||||||||||||| ||||||||||||||    
T  31127142 tagtctacggtcctgcacacttgaacaaatactagcatatcgaattgac---tttttaataccttgttatcatcaaaacttaagg-tggtaatgttaaac 31127047  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  31127046 acattttgttccaaca 31127031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 9192767 - 9192916
Alignment:
Q  43 tcttcagacgttatctccttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaat 142  Q
    ||||||||| || ||| ||||||| |||||||  ||||| ||| ||||||||||||||||||||||||||||||||||| | || ||| |||||||||||    
T  9192767 tcttcagactttgtcttcttcagattctatcttacaacacaagtttcctttttgtaaatttcattgctctcatttgttccttcaaaacctatacttgaat 9192866  T
Q  143 taaagacatttaactttttgtctaaggtcatgcacacttgaacaaatatt 192  Q
    ||||| | | ||| | | |||||| |||| |||||||| |||||||||||    
T  9192867 taaagtcttataaatctatgtctatggtcttgcacactagaacaaatatt 9192916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 19626131 - 19626326
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| ||||||||||||||||  || |||| |||||||||||| ||||| ||| ||| || || ||||||||| ||||  ||||||||| |||| |||    
T  19626131 gcaacacaagcttcctttttgtagtttccatttctctcatttgttattccaaaacctatgctcgatttaaagaca-ttaaagttttgtctatggtcctgc 19626229  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||| | ||| | | |       ||||||||||||||||||||||| ||  | |||||||||||||||||||| ||||||||    
T  19626230 acacttgaacaaatattagcatctccaaat-aacaatttttaataccttgttatcatcaaaactcaa--agggtaatgttaaacacattttgttccaaca 19626326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 17928111 - 17928304
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||||||||  | |  |||||||||||||||||||| ||||| ||| |||   ||||||||| | || |||||||||| |||||||     
T  17928111 gcaacacaagcttcctttttgttgaatctattgctctcatttgttcttc-agaacctatgcttt--ttaaagacactaaattttttgtctatggtcatgt 17928207  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||| ||||||| |       | |||||||||||||| |||||| ||  | |||||||||||||||||||| ||||||||    
T  17928208 acacttgaacaaatattagcatatccaattga-caatttttattaccttgttatcataaaaactcaa--agggtaatgttaaacacattttgttccaaca 17928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 77 - 207
Target Start/End: Original strand, 25592833 - 25592964
Alignment:
Q  77 caacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaagg-tcatgc 175  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||| | | ||||||| |||| ||||| | | | | || |||    
T  25592833 caacacaagcttcctttttgtagattccattgctctcatttgttcttccagaacttatgctttattcaaagacacttaatttttttttttatgatcctgc 25592932  T
Q  176 acacttgaacaaatattagcatattcaattga 207  Q
    |||||||||||||||||||||||| |||||||    
T  25592933 acacttgaacaaatattagcatatccaattga 25592964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 23298236 - 23298438
Alignment:
Q  58 tccttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacattt-aac 156  Q
    |||||||||| ||  || |||||  |||||||||||||||| ||| |||||||||||||||||||| |||||| ||| ||| ||  | |||| ||| ||     
T  23298236 tccttcagacgcttccttgcaactcaagcttcctttttgtagattccattgctctcatttgttctt-cagaacctatgctttaa--agagacgtttcaaa 23298332  T
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| |||||||||  |||||||||||||||||||||||| |       ||||||||||||||||||||||| ||  | ||||||||||    
T  23298333 tttttgtctatggtcctgcacactt-tacaaatattagcatattcaattga-catcttttaataccttgttatcatcaaaactcaa--agggtaatgtta 23298428  T
Q  257 aacacatttt 266  Q
    ||||||||||    
T  23298429 aacacatttt 23298438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 266
Target Start/End: Original strand, 23231448 - 23231633
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttttt-gtctaaggtcatg 174  Q
    |||||| |||||||||||  ||||||| | |||||||| ||||||||| ||||||  ||||||| || |||||||| ||||||||| ||||| |||| ||    
T  23231448 gcaacacaagcttccttt--gtaaattcctttgctctcttttgttctttcagaaccaatacttggataaaagacatataacttttttgtctatggtcctg 23231545  T
Q  175 cacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttt 266  Q
    || | || || |||||||||||||| ||||||||        ||||||||||||||||||||| |||||| || |||| |||||||||||||    
T  23231546 catagttaaataaatattagcatatccaattgac---tttttaataccttgttatcatcaaaatttaagg-tgctaatattaaacacatttt 23231633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 26185969 - 26186178
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||||||||  ||||||||||||||||||||||  | ||| |  ||||||||| ||||||||| ||||||  |||| |   || ||||| | | | |||    
T  26185969 cttcagactcagtctagcaacataagcttccttt--gaaaaatatattgctctcttttgttctttcagaaccaataccttgttttaagacttattaattt 26186066  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    | ||||| |||| ||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| | |  |||||||||    
T  26186067 tagtctatggtcctgcacacttgaacaaatattagcatatccaattgac---tctttcataccttgttatcatcaaaacttaagg-tcgcgatgttaaac 26186162  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  26186163 acattttgttccaaca 26186178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 30451364 - 30451207
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||||||||| || ||| ||||||||||||||||||||| ||||| ||| ||| | ||||||||||| || |||||||||| | || || |||||||    
T  30451364 aagcttcctttttatagattccattgctctcatttgttcttc-agaacctatgcttcatttaaagacattcaaatttttgtctatgatcctgaacacttg 30451266  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaa 242  Q
    | |||||||||||||||  |||||  |       ||||||||||||||||||||||||||    
T  30451265 agcaaatattagcatatctaattg-tcattttttaataccttgttatcatcaaaacttaa 30451207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 3680861 - 3680976
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| |       |||| ||||||||||||||||||  |  | ||||||||||    
T  3680861 tttttgtctatggtcatgtacacttgaacaaatattagcatattcaattga-caatttttaatatcttgttatcatcaaaactccaaaaaggtaatgtta 3680959  T
Q  257 aacacattttattccaa 273  Q
    |||| ||||||||||||    
T  3680960 aacatattttattccaa 3680976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 9718229 - 9718347
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  9718229 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 9718327  T
Q  257 aacacattttattccaacag 276  Q
    ||||||||||||||||||||    
T  9718328 aacacattttattccaacag 9718347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 10704351 - 10704237
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||| |||| |||| |||||||||||| || |||||||||||||||||| |        ||||| |||||||||||||||||||||| |||||||||||    
T  10704351 tttttatctatggtcctgcacacttgaataagtattagcatattcaattggc---attttaatactttgttatcatcaaaacttaagg-tggtaatgtta 10704256  T
Q  257 aacacattttattccaaca 275  Q
    ||||||| || ||||||||    
T  10704255 aacacatattgttccaaca 10704237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 24117214 - 24117331
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       ||||| ||||||||||||||||||    | ||||||||||    
T  24117214 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatacattgttatcatcaaaactttcaaaaggtaatgtta 24117312  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  24117313 aacacattttgttccaaca 24117331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 14325191 - 14325112
Alignment:
Q  84 agcttcctttttgtaaatttcattgctctcatttgttcttccagaaca--tatacttgaattaaagacatttaacttttt 161  Q
    |||||||||||| |||||| ||||||||||||||| ||||||| ||||  ||||||| | ||||||||||||||||||||    
T  14325191 agcttcctttttttaaattccattgctctcatttgatcttccaaaacacctatactttatttaaagacatttaacttttt 14325112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 14418201 - 14418122
Alignment:
Q  84 agcttcctttttgtaaatttcattgctctcatttgttcttccagaaca--tatacttgaattaaagacatttaacttttt 161  Q
    |||||||||||| |||||| ||||||||||||||| ||||||| ||||  ||||||| | ||||||||||||||||||||    
T  14418201 agcttcctttttttaaattccattgctctcatttgatcttccaaaacacctatactttatttaaagacatttaacttttt 14418122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 13145456 - 13145570
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||||||  ||| |||||||||||| |||||||||||||| ||||||||         ||| ||||||| ||||||||||||||| |||||||||||    
T  13145456 tttttgtctatcgtcctgcacacttgaataaatattagcatatccaattgactttttg---atatcttgttaccatcaaaacttaagg-tggtaatgtta 13145551  T
Q  257 aacacattttattccaaca 275  Q
    |||||| ||| ||||||||    
T  13145552 aacacagtttgttccaaca 13145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 13602541 - 13602657
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||     | ||||||||||    
T  13602541 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgac--aattttaataccttgttatcatcaaaactctcaaagggtaatgtta 13602638  T
Q  257 aacacattttattccaaca 275  Q
    || ||||||| ||||||||    
T  13602639 aaaacattttgttccaaca 13602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 19086536 - 19086653
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || ||||||||| |||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  19086536 tttttgtctatggtcttgtacacttgaaaaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 19086634  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  19086635 aacacattttgttccaaca 19086653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 14758616 - 14758747
Alignment:
Q  109 ctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||| |||||||||||||||||  || |||   || || |||| ||| |||| ||||| |||| | ||||||||||||||||||||||||| |||||||     
T  14758616 ctctaatttgttcttccagaaccaatgcttttctttaatacatataaattttagtctatggtccttcacacttgaacaaatattagcatatccaattgaa 14758715  T
Q  209 cnnnnnnnaataccttgttatcatcaaaacttaag 243  Q
    |       |||||||||||||||||||||||||||    
T  14758716 c---ttttaataccttgttatcatcaaaacttaag 14758747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 15987580 - 15987688
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||| || |||| ||||||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  15987580 tttttgtatatggtcctgcacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 15987678  T
Q  257 aacacatttt 266  Q
    ||||||||||    
T  15987679 aacacatttt 15987688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 275
Target Start/End: Original strand, 16877613 - 16877718
Alignment:
Q  170 tcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacatttta 267  Q
    ||||| |||||||||||||||||||||||| ||||||||        ||||| |||||||||||||||  |||||||  | ||||||||||||||||||     
T  16877613 tcatgtacacttgaacaaatattagcatatccaattgacaattttttaatactttgttatcatcaaaattcttaagg--gttaatgttaaacacattttg 16877710  T
Q  268 ttccaaca 275  Q
    ||||||||    
T  16877711 ttccaaca 16877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 276
Target Start/End: Original strand, 15955092 - 15955191
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact--taaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||  ||||| |  |||||||||||||||||| ||||||    
T  15955092 acacttgaacaaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaactcttaagggt--taatgttaaacacattttgttccaa 15955188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 275
Target Start/End: Original strand, 17381828 - 17381933
Alignment:
Q  169 gtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacatttt 266  Q
    |||||| |||||||||||| ||||||||||| ||||||||        |||||||||||||||||||||  |||||||  | ||||||||||||||||||    
T  17381828 gtcatgtacacttgaacaagtattagcatatccaattgac-aatttttaataccttgttatcatcaaaactcttaagg--gttaatgttaaacacatttt 17381924  T
Q  267 attccaaca 275  Q
     ||||||||    
T  17381925 gttccaaca 17381933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 19689102 - 19689219
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||| ||||||||||||||| | ||||| ||        |||||||||||||||||||||||  |  | ||||||||||    
T  19689102 tttttgtctatggtcctgtacacttaaacaaatattagcatgtacaattcac-aatttttaataccttgttatcatcaaaactctaaaagggtaatgtta 19689200  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  19689201 aacacattttgttccaaca 19689219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 34451447 - 34451330
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||  |||| || || ||||||||||||||||||||| ||||||||        |||||||||||||||||||||||     | ||||||||||    
T  34451447 tttttgtctttggtcctgtacgcttgaacaaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaactcttaaagggtaatgtta 34451349  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  34451348 aacacattttgttccaaca 34451330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 275
Target Start/End: Original strand, 16528926 - 16529026
Alignment:
Q  174 gcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||||| ||||||| |       |||||||| ||||||||||||||     | |||||||||||||||||||| ||||||    
T  16528926 gcacacttgaacaaatattagcatatccaattga-caatttttaataccttattatcatcaaaactcgcaaagggtaatgttaaacacattttgttccaa 16529024  T
Q  274 ca 275  Q
    ||    
T  16529025 ca 16529026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 18435960 - 18436011
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||    
T  18435960 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgac 18436011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 20462225 - 20462320
Alignment:
Q  109 ctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaat 204  Q
    ||||||||||||||||||||||| |||| |   || ||||| | ||| |||| ||||| | || |||||||||||||||||||||| |||| ||||    
T  20462225 ctctcatttgttcttccagaacaaataccttcttttaagacttataaattttagtctatgatcctgcacacttgaacaaatattagtatatccaat 20462320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 15477583 - 15477549
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||||||||||||||||||||||||||||    
T  15477583 tgcacacttgaacaaatattagcatattcaattga 15477549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 21625484 - 21625602
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac-cnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtt 255  Q
    |||||||||| |||| || ||||||||||||||||||| |||| ||||||||         |||||||||||||||||||||||     | |||||||||    
T  21625484 tttttgtctatggtcctgtacacttgaacaaatattagaatatccaattgacaatttttttaataccttgttatcatcaaaactctcaaagggtaatgtt 21625583  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  21625584 aaacacatttt-ttccaaca 21625602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 25596098 - 25596155
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||  |||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  25596098 aataccttactatcatcaaaacttaagg-tggcaatgttaagcacattttattccaaca 25596155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 7618115 - 7618054
Alignment:
Q  217 aataccttgttatcatcaaaact--taaggatggtaatgttaaacacattttattccaacagaa 278  Q
    |||||||||||||||||||||||  ||||| |  |||||||||||||||||| |||||||||||    
T  7618115 aataccttgttatcatcaaaactcttaagggt--taatgttaaacacattttgttccaacagaa 7618054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 15302557 - 15302639
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| |||| || |||||||||||||||||||||||| | ||||||        ||||| |||||||||||||||||    
T  15302557 tttttgtctatggtcctgtacacttgaacaaatattagcatatccgattgacaattttttaatacattgttatcatcaaaact 15302639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 18384024 - 18384105
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| |||| || |||||| ||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  18384024 tttttgtctatggtcctgtacactttaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 18384105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 19473209 - 19473307
Alignment:
Q  175 cacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaa 273  Q
    ||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||| |||  | | |||||||||||||||||| ||||||    
T  19473209 cacacttgaacaaatattagcatatccaattga-taatttttaataccttgttatcatcaaaactctaa--aggataatgttaaacacattttgttccaa 19473305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 19624348 - 19624465
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || ||||||||||||||||||||||||  |||||| |       ||||| |||||||||||||||||     | ||||||||||    
T  19624348 tttttgtctatggtcctgtacacttgaacaaatattagcatatctaattga-caatttttaatactttgttatcatcaaaactctcaaagggtaatgtta 19624446  T
Q  257 aacacattttattccaaca 275  Q
    ||||||||||  |||||||    
T  19624447 aacacattttgctccaaca 19624465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 26971973 - 26971856
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||| || |||| || |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||||     | | ||||||||    
T  26971973 tttttgtttatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaaaggctaatgtta 26971875  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  26971874 aacacattttgttccaaca 26971856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 17868153 - 17868219
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaa 242  Q
    ||||||||||||||||||||||||||| ||||| ||        ||||||||||||||||||||||||||    
T  17868153 tgcacacttgaacaaatattagcatatccaatttac---attttaataccttgttatcatcaaaacttaa 17868219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 17877936 - 17878002
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaa 242  Q
    ||||||||||||||||||||||||||| ||||| ||        ||||||||||||||||||||||||||    
T  17877936 tgcacacttgaacaaatattagcatatccaatttac---attttaataccttgttatcatcaaaacttaa 17878002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 21618624 - 21618740
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||  |||||||||||||||  |||||||  | ||| |||    
T  21618624 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataatttgttatcatcaaaactcttaagg--gttaacgtt 21618720  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||||||||||||    
T  21618721 aaacacattttattccaaca 21618740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 22802511 - 22802591
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||| |||| || ||||||||| |||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  22802511 ttttgtctatggtcctgtacacttgaaaaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 22802591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 10640265 - 10640222
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttcca 126  Q
    |||||||||| ||||  |||||||||||||||||||||||||||    
T  10640265 aagcttccttcttgttgatttcattgctctcatttgttcttcca 10640222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 14100301 - 14100254
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  14100301 aagcttcctttttgttgattccattgctctcttttgttcttccagaac 14100254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 15531386 - 15531335
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||| |||| |||| || |||||||||||||||||||||||| ||||||||    
T  15531386 tttttatctatggtcctgtacacttgaacaaatattagcatatccaattgac 15531335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 16336541 - 16336592
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||  |||||||||||||||||||||||| ||||||||    
T  16336541 tttttgtctatagtcatctacacttgaacaaatattagcatatccaattgac 16336592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 21847081 - 21847031
Alignment:
Q  224 tgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||| |||||||||||| || ||||| ||||||||    
T  21847081 tgttatcatcaaaacttaagg-tggtaatgttaagcatattttgttccaaca 21847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 12423610 - 12423652
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatat 199  Q
    ||||||||||  |||||| ||||||||||||||||||||||||    
T  12423610 tttttgtctatagtcatgtacacttgaacaaatattagcatat 12423652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 13435918 - 13435968
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||| |||| || ||| |||||||||||||||||||| |||||||    
T  13435918 tttttgtctatggtcctgtacatttgaacaaatattagcatatccaattga 13435968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 14315316 - 14315278
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  14315316 ggtcatgcaaacttgaacacatattagcatattcaattg 14315278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 15552308 - 15552358
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||| ||||| |||| || | ||||||||||||||||||||||||||||||    
T  15552308 ttttagtctatggtcctgtatacttgaacaaatattagcatattcaattga 15552358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 17608082 - 17608000
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagc-atattcaattgaccnnnnnnnaataccttgttatcatcaaaactta 241  Q
    |||||||| ||||||| |||||||||||||||||||| || | ||||||| |       |||||||||||||||||||||||||    
T  17608082 tttgtctatggtcatgtacacttgaacaaatattagcaatgtccaattga-caatttttaataccttgttatcatcaaaactta 17608000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 20730483 - 20730433
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||| | || || |||||||||||||||||||||||| ||||||||    
T  20730483 ttttgtctatgatcctgtacacttgaacaaatattagcatatccaattgac 20730433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 25597848 - 25597890
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatat 199  Q
    |||||||||| |||| || ||||||||||||||||||||||||    
T  25597848 tttttgtctatggtcctgtacacttgaacaaatattagcatat 25597890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 31719468 - 31719434
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||||||||||||||||||| |||||||||||||    
T  31719468 tgcacacttgaacaaatattaacatattcaattga 31719434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 12349369 - 12349401
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  12349369 acacttgaacaaatattagcatatccaattgac 12349401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 12715263 - 12715219
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccag 127  Q
    |||||||||||||||  ||||| |||||||| |||||||||||||    
T  12715263 aagcttcctttttgttgatttctttgctctcttttgttcttccag 12715219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 22056479 - 22056431
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||||||  ||| || |||||||||||||||||||||||| |||||    
T  22056479 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaatt 22056431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 29918408 - 29918440
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  29918408 acacttgaacaaatattagcatatccaattgac 29918440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 701 - 501
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||| | || | |    
T  701 atcttgcaacataagcttcctttttataaattacattgctctcttttgttcttccagaacatatacttgaattaacgacatacaactttttatatatgat 602  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
    | ||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  601 cctgcacacttgaacaaatattagcatatgcaattgac---atattaataccttgttatcatcaaaacttaagg-tggtaatgttaaacacattttgttc 506  T
Q  271 caaca 275  Q
    |||||    
T  505 caaca 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 10214 - 10025
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||||||||||||| || |||||||||  |||||||||||| ||| |||||||||||||||||||| ||||||| |||||| |||||||||||||||    
T  10214 aagcttcctttttgtaatttccattgctcttttttgttcttccaaaacctatacttgaattaaagacatataactttctgtctatggtcatgcacacttg 10115  T
Q  183 aacaaatattagcata-ttcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||| ||||||||||        ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  10114 aacaaatattagcatatttcaattgac---attttaataccttgttatcatcaaaatttaagg-tggtaatgttaaacacattttgttccaaca 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 6310 - 6422
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| ||||||||||||||||||||| ||||| ||||||| || || | ||   ||| |||||||||| |||| |||||||||     
T  6310 aagcttccttcttgttgattccattgctctcatttgttcttctagaacctatactttaaatagacac---taaatttttgtctatggtcctgcacacttt 6406  T
Q  183 aacaaatattagcata 198  Q
    |||||||||| |||||    
T  6407 aacaaatatttgcata 6422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 96)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 60 - 266
Target Start/End: Complemental strand, 8728888 - 8728685
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | | |||    
T  8728888 cttcagacgctatcttgcaacacaagcttcctttttgtaaattccattgctctcatttgttcttccagaacctatacttgaattaaagacatattaattt 8728789  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| |||| |||||||||||||||||||||||||||  |||||||         ||||||||||||| |||||||| || | ||||| ||||||||    
T  8728788 ttgtctatggtcctgcacacttgaacaaatattagcatatctaattgac--attttttataccttgttatcctcaaaactcaaag-tggtattgttaaac 8728692  T
Q  260 acatttt 266  Q
    |||||||    
T  8728691 acatttt 8728685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 60 - 266
Target Start/End: Complemental strand, 9080775 - 9080572
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | | |||    
T  9080775 cttcagacgctatcttgcaacacaagcttcctttttgtaaattccattgctctcatttgttcttccagaacctatacttgaattaaagacatattaattt 9080676  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| |||| |||||||||||||||||||||||||||  |||||||         ||||||||||||| |||||||| || | ||||| ||||||||    
T  9080675 ttgtctatggtcctgcacacttgaacaaatattagcatatctaattgac--attttttataccttgttatcctcaaaactcaaag-tggtattgttaaac 9080579  T
Q  260 acatttt 266  Q
    |||||||    
T  9080578 acatttt 9080572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 66 - 276
Target Start/End: Complemental strand, 19197724 - 19197518
Alignment:
Q  66 actctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtct 165  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||  ||||  |||||||| || | | |||||||    
T  19197724 actctatcttgaaacataagctcactttttgtaaatttcattgctctcatttgttcttccagaacctatgtttgatataaagacacttgaatctttgtct 19197625  T
Q  166 aaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattt 265  Q
    | |||| || |||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||||||  | ||||||||||||| |||||    
T  19197624 atggtcctgtacacttgaacaaatattagcatatccaattgac--atttttaataccttgttatcatcaaaacttaa--agggtaatgttaaacgcattt 19197529  T
Q  266 tattccaacag 276  Q
    | |||||||||    
T  19197528 tgttccaacag 19197518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 14072989 - 14073128
Alignment:
Q  68 tctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaa 167  Q
    ||||||| | |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||  |||||||| |||| ||||||| ||     
T  14072989 tctatcttgtaacacaagcttcctttttgtagattccattgctctcatttgttcttccagaacatatgcttgatataaagacacttaaatttttgtttat 14073088  T
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  14073089 ggtcatgcacacttgaacaaatattagcatatccaattga 14073128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 13699591 - 13699800
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||||||||| ||| ||||||||||||||||||  | ||||| |||||||||| ||||||||| ||||||  ||||||  ||| ||||| | ||| |||    
T  13699591 cttcagactctgtcttgcaacataagcttccttt--gcaaattccattgctctcttttgttctttcagaaccaatactttgatttaagacttataaattt 13699688  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| | || | ||||||||||||||||||||||||| ||||||||        |||| ||||||||||||||||||||||| ||||||||||||||    
T  13699689 ttgtctatgatccttcacacttgaacaaatattagcatatccaattgac---tttttaatatcttgttatcatcaaaacttaagg-tggtaatgttaaac 13699784  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  13699785 acattttgttccaaca 13699800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 62 - 276
Target Start/End: Complemental strand, 4243066 - 4242854
Alignment:
Q  62 tcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaac-tttt 160  Q
    ||||||| | ||| |||||  |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   |||||||||| |||| ||||    
T  4243066 tcagactttttcttgcaactcaagcttcctttttgtaaattccattgctctcatttgttcttccataacctatacttagtttaaagacatgtaacttttt 4242967  T
Q  161 tgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaaca 260  Q
    | |||| |||| ||||||||||||||||||||||||||| ||||||||        |||| |||||||||||||||||| ||  |||||| |||||||||    
T  4242966 tttctatggtcctgcacacttgaacaaatattagcatatccaattgac--atttttaatatcttgttatcatcaaaactcaa-aatggtattgttaaaca 4242870  T
Q  261 cattttattccaacag 276  Q
    |||| | |||||||||    
T  4242869 cattatgttccaacag 4242854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 60 - 258
Target Start/End: Original strand, 20418466 - 20418659
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||||||| | ||| |||||| |||||||  ||||||||||| |||||||||||||||||||| || |||  ||||||||||||||||| |  || | |    
T  20418466 cttcagactttgtcttgcaacaaaagcttc--ttttgtaaattccattgctctcatttgttctttcaaaaccaatacttgaattaaagacttacaaatgt 20418563  T
Q  160 tt-gtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaa 258  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||| |||||||||||||    
T  20418564 ttagtctaaggtcctgcacacttgaacaaatattagcatattcaattgac---attttaataccttgttgtcatcaaaacttaagg-tggtaatgttaaa 20418659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 16882591 - 16882791
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| |||||| | |||||||||||| ||||| || ||||||||||||||||||||| ||  ||||||||| ||||||| | ||||||||||| || |||    
T  16882591 atcttgcaacacatgcttcctttttgcaaattgcagtgctctcatttgttcttccaggaccaatacttgaagtaaagacttgtaactttttgtttatggt 16882690  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
    |  || |||||||||||||| |||||||| | ||||||        |||||||| ||||||||||||||||| | ||||||||||||||||||||| |||    
T  16882691 cccgctcacttgaacaaatactagcatatcccattgac--atttttaataccttattatcatcaaaacttaaaggtggtaatgttaaacacattttgttc 16882788  T
Q  271 caa 273  Q
    |||    
T  16882789 caa 16882791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 76 - 276
Target Start/End: Original strand, 10852071 - 10852268
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||| ||||||||| |||  ||||||||||||||||||| |||||| ||| ||||| |||| |||| |||| ||||||| || |||| |||    
T  10852071 gcaacacaagctttctttttgtagattcaattgctctcatttgttctttcagaacctatgcttgatttaaggacacttaaatttttgtttatggtcctgc 10852170  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||| |||||| |        ||||||||||||||||||||||| || | ||||| ||| ||||||||||| ||||||||    
T  10852171 acacttgaacaaatattagcatatccaattggc--atttttaataccttgttatcatcaaaactaaaag-tggtattgtcaaacacattttgttccaaca 10852267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 17697870 - 17698066
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| ||| |||||||||||| |||  |||||||||||||||||||||| ||| ||| ||||  ||| ||||| |||| |||||||||| |||| |||    
T  17697870 gcaacacaaggttcctttttgtagattcaattgctctcatttgttcttccataacctatgcttggtttagagacacttaaatttttgtctatggtcttgc 17697969  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
     |||||||| |||||||||||||| ||||||| |       ||||||||||||||||||||||| ||  | |||||||||||||||||||| ||||||||    
T  17697970 gcacttgaataaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcaa--agggtaatgttaaacacatttttttccaaca 17698066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 60 - 276
Target Start/End: Original strand, 19705662 - 19705872
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||||||| || ||||||||||||||||||  ||||| | | |||||||||  ||||||||| ||||  ||||||   |||||||| |  || |||    
T  19705662 cttcagactctaacttgcaacataagcttccttt--gtaaaatcctttgctctcacctgttcttcctgaaccaatactttgtttaaagacttacaaattt 19705759  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    | ||||| |||||||||||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||||||||| ||| ||||||||||    
T  19705760 tagtctatggtcatgcacacttgaacaaatattagcatatccaattgaac---ttttaatactttgttatcatcaaaacttaagg-tggcaatgttaaac 19705855  T
Q  260 acattttattccaacag 276  Q
    ||||||| |||||||||    
T  19705856 acattttgttccaacag 19705872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 60 - 272
Target Start/End: Original strand, 13654198 - 13654404
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||| || ||| ||||||||||||||||||  || ||||  ||| ||||| ||||||||| |||||   ||||||| ||| ||||| | ||| |||    
T  13654198 cttcagaccctgtcttgcaacataagcttccttt--gttaattcgatttctctcttttgttctttcagaatcaatacttggatttaagacttataaattt 13654295  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| |||| ||||||||| ||||||||||||||||| ||||||||        |||||||||||||||||||||||||||| || |||||||||||    
T  13654296 ttgtctatggtcttgcacacttcaacaaatattagcatatccaattgac---tttttaataccttgttatcatcaaaacttaagg-tgataatgttaaac 13654391  T
Q  260 acattttattcca 272  Q
    ||||||| |||||    
T  13654392 acattttgttcca 13654404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 43 - 275
Target Start/End: Original strand, 14007857 - 14008086
Alignment:
Q  43 tcttcagacgttatctccttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaat 142  Q
    |||||||| ||||||| ||||  ||||||||| | || ||| ||| |||||||||| ||| ||| ||||||||||||||||| ||||| ||| |||||      
T  14007857 tcttcagatgttatcttcttccaactctatcttgtaagataggctccctttttgtagattccatagctctcatttgttcttctagaacctatgcttgata 14007956  T
Q  143 taaaga-catttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaactta 241  Q
    |||||| | || || ||||| |||| | || |||||||||||||||||||||| |||| ||||||||        ||||| ||||||||||||||||| |    
T  14007957 taaagacccttaaattttttatctatgatcctgcacacttgaacaaatattagtatatccaattgac--atttttaatactttgttatcatcaaaactaa 14008054  T
Q  242 aggatggtaatgttaaacacattttattccaaca 275  Q
    |  |||||||||||||||||||||| ||||||||    
T  14008055 a--atggtaatgttaaacacattttgttccaaca 14008086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 71 - 275
Target Start/End: Original strand, 50722013 - 50722211
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| ||||||||||||||||||  | |||||||||||||||| |||||| || || |||  | |||||||||||| ||   ||| |||| ||||| |||    
T  50722013 atcttgcaacataagcttccttt--gaaaatttcattgctctcgtttgttttttcaaaaccaaaacttgaattaaacactgataaattttagtctatggt 50722110  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
      |||||| |||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||||| ||     
T  50722111 gttgcacatttgaaccaatattagcatattcaattgac---attttaataccttgttatcatcaaaacttaagg-tggtaatgttaaacacattttgttt 50722206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 50790836 - 50790638
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| ||||||||||||||||||  | |||||||||||||||| |||||| || || |||  | |||||||||||| ||   ||| |||| ||||| |||    
T  50790836 atcttgcaacataagcttccttt--gaaaatttcattgctctcgtttgttttttcaaaaccaaaacttgaattaaacactgataaattttagtctatggt 50790739  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
      |||||| |||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||||| ||     
T  50790738 gttgcacatttgaaccaatattagcatattcaattgac---attttaataccttgttatcatcaaaacttaagg-tggtaatgttaaacacattttgttt 50790643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 14077223 - 14077035
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||||| ||| ||| | ||||||||||||||||||| ||||| |||  |||| ||||||||| |||| | |||||||| |||| ||||||||||    
T  14077223 aagcttcctttt-gtagattccgttgctctcatttgttcttcaagaacctatgtttgatttaaagacacttaaatgtttgtctatggtcctgcacacttg 14077125  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||| |||||||||||        |||||| |||||||||||||||| || | ||||| ||| ||||||||||| ||||||||    
T  14077124 aacaaatattagcacattcaattgac--atttttaataccctgttatcatcaaaactcaaag-tggtattgtcaaacacattttgttccaaca 14077035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 275
Target Start/End: Original strand, 7494569 - 7494768
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| ||||||||||||||||||    ||||| |||||||||||||||||||| || ||   | ||||||||||||||| | ||| |||||| ||| |||    
T  7494569 atcttgcaacataagcttcctttgaa-aaattccattgctctcatttgttctttcataatcaaaacttgaattaaagacttataaatttttgactatggt 7494667  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
    | |||||||||||| |||||||| ||  ||||||||||        ||||| |||||||||||||||||||||| ||||||| | ||||||||||| |||    
T  7494668 cctgcacacttgaataaatattaacaatttcaattgac---attttaatactttgttatcatcaaaacttaagg-tggtaatatgaaacacattttgttc 7494763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 11514126 - 11514291
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||||| |||||||||||||||  |||| |   || ||||| | ||| |||| ||||| |||  |||||||||||||||||||||||||||||||||    
T  11514126 ttgctctcaattgttcttccagaaccaataccttgctttaagacttataaattttagtctatggttctgcacacttgaacaaatattagcatattcaatt 11514225  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    || |       |||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||    
T  11514226 gaac---ttttaataccttgttatcatcaaaacttaagg-tgacaatgttaaacacattttgttccaaca 11514291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 3087784 - 3087980
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttttt-gtctaaggtcatg 174  Q
    ||||||||||||||||||  ||||||| |||||||||| |||||||||| |||||  |||||| |||| ||| | |  || ||||| || || |||| ||    
T  3087784 gcaacataagcttccttt--gtaaattccattgctctcttttgttcttctagaaccaatactttaatttaagccttacaaatttttagtttatggtcctg 3087881  T
Q  175 cacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaac 274  Q
    ||||||||||||||||||||||||| |||||||         ||||| ||||||| |||||||||||| | ||||||||||||||| ||||| |||||||    
T  3087882 cacacttgaacaaatattagcatatccaattga-ttttttttaatacattgttattatcaaaacttaatg-tggtaatgttaaacaaattttgttccaac 3087979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 12397424 - 12397616
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||| ||||||| | | ||||||| ||||||||||| ||||| |||||||   |||| |||| | || |||||||||| |||| |||    
T  12397424 gcaacacaagcttccttcttgtaaagtcctttgctctaatttgttcttc-agaacctatacttc--ttaaggacactaaa-tttttgtctatggtcctgc 12397519  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||||||  |||||| |       |||| |||||||||||||||||||||  | |||||||||||| ||||||| ||||||||    
T  12397520 acacttgaacaaatattagcatatctaattga-caatttttaatatcttgttatcatcaaaacttaa--aaggtaatgttaaagacattttgttccaaca 12397616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 16199651 - 16199464
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||| || ||||  ||| |||||||||||||||||| |||||||| ||||||| ||  ||||||| | || |||||||||| |||| ||| ||||||    
T  16199651 aagcttctttcttgttgattccattgctctcatttgttcctccagaacctatactttaa--aaagacact-aattttttgtctatggtcctgcgcacttg 16199555  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||||| |       |||||||||||||||||||||||  |  | |||||||||||||||| ||| ||||||||    
T  16199554 aacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcta-tagggtaatgttaaacacactttgttccaaca 16199464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 20725412 - 20725599
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  |||||||||||||||||||||||| || ||| ||  ||| ||  | | ||   ||| |||||||||| |||| ||||||||||    
T  20725412 aagcttccttcttgttgatttcattgctctcatttgttcttacataacctaagctttaaggagacac---taaatttttgtctatggtcctgcacacttg 20725508  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||||         ||||||||||||||||||||||| |||  | |||||||||||||||||||| ||||||||    
T  20725509 aacaaatattagcatattcaattga-taatttttaataccttgttatcatcaaaactctaa--agggtaatgttaaacacattttgttccaaca 20725599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 12968659 - 12968846
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| |||| | |||||||||||||| ||||| ||| ||  || | |||||||| ||  ||||||||| |||| || |||||||    
T  12968659 aagcttccttcttgttgattccattaccctcatttgttcttctagaacctatgct--aaattaagacattgaagattttgtctatggtcctgtacacttg 12968756  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||||| |       |||| |||||||||||||||||| ||  | |||||||||||||||||||| ||||||||    
T  12968757 aacaaatattagcatatccaattga-caatttttaatatcttgttatcatcaaaactcaa--agggtaatgttaaacacattttgttccaaca 12968846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 21317701 - 21317799
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcca 272  Q
    |||| |||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  21317701 tgcatacttgaacaaatattagcatatccaattgac---tctttaataccttgttatcatcaaaacttaagg-tggtaatgttaaacacattttgttcca 21317796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 275
Target Start/End: Original strand, 6713396 - 6713568
Alignment:
Q  100 atttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatat 199  Q
    ||||||||||||||||||||||||||| ||| |||  ||||  || | ||| |||| ||||||| || |||| ||| ||||||||||||||||| |||||    
T  6713396 atttcattgctctcatttgttcttccacaacctatgtttgatatacaaacacttaaatttttgtatatggtcttgcgcacttgaacaaatattaacatat 6713495  T
Q  200 tcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
     ||||||| |       ||||||||||||||||||||||| ||  | | ||||||||| |||||||| ||||||||    
T  6713496 ccaattga-cattttttaataccttgttatcatcaaaactcaa--aggataatgttaagcacattttgttccaaca 6713568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 275
Target Start/End: Complemental strand, 19249228 - 19249065
Alignment:
Q  107 tgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    |||||||||||||||||||||||| ||||||| ||  | ||||| | || ||||||| || |||| ||||||||||||||||||||||||||| ||||||    
T  19249228 tgctctcatttgttcttccagaacctatacttcaa--agagacactaaa-tttttgtttatggtcctgcacacttgaacaaatattagcatatccaattg 19249132  T
Q  207 accnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
    | |       ||||| ||||||||||||||||| |||  | |||||| ||||||||||||| ||||||||    
T  19249131 a-caatttttaatactttgttatcatcaaaactctaa--agggtaatattaaacacattttgttccaaca 19249065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 2561565 - 2561683
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| | ||||| |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||     |  |||||||||    
T  2561565 tttttgtctatgatcatgtacacttgaacaaatattagcatatccaattgacaattttttaataccttgttatcatcaaaactctcaaagagtaatgtta 2561664  T
Q  257 aacacattttattccaaca 275  Q
    ||||||||||||| |||||    
T  2561665 aacacattttatttcaaca 2561683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 33583647 - 33583764
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    ||||||||||  ||| || |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||  |||||||  | ||||||    
T  33583647 tttttgtctatagtcctgtacacttgaacaaatattagcatattcaattga-ctattttgaataccttgttatcatcaaaactcttaagg--gttaatgt 33583743  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  33583744 taaacacattttgttccaaca 33583764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 33598267 - 33598384
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    ||||||||||  ||| || |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||  |||||||  | ||||||    
T  33598267 tttttgtctatagtcctgtacacttgaacaaatattagcatattcaattga-ctattttgaataccttgttatcatcaaaactcttaagg--gttaatgt 33598363  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  33598364 taaacacattttgttccaaca 33598384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 41495359 - 41495475
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||     |   ||||||||    
T  41495359 tttttgtctatggtcttgtacacttgaacaaatattagcatattcaattgac--aattttaataccttgttatcatcaaaactctcaaagaataatgtta 41495456  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||||||||||||    
T  41495457 aacacattttattccaaca 41495475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 49553262 - 49553145
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| |       |||||| ||||||||||||||||     | | ||||||||    
T  49553262 tttttgtctatggtcatgtacacttgaacaaatattagcatattcaattga-caatttttaataccctgttatcatcaaaactcttaaaggataatgtta 49553164  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  49553163 aacacattttgttccaaca 49553145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 16794037 - 16793980
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  16794037 aataccttgttatcatcaaaacttaagg-tggtaaagttaaacacattttgttccaaca 16793980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 38177460 - 38177346
Alignment:
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    |||||||  |||||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | |||||||||||||    
T  38177460 ttgtctattgtcatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaac 38177362  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  38177361 acattttgttccaaca 38177346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 14392780 - 14392663
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||| |     | ||||||||||    
T  14392780 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaaatctcaaagggtaatgtta 14392682  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  14392681 aacacattttgttccaaca 14392663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 28582492 - 28582573
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  28582492 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 28582573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 31303774 - 31303891
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||||||||| |       ||||| |||| ||||||||||||     | | ||||||||    
T  31303774 tttttgtctatggtcatgtacacttgaacaaatattaacatattcaattga-caatttttaatacattgtaatcatcaaaactctcaaaggataatgtta 31303872  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||||||||||||    
T  31303873 aacacattttattccaaca 31303891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 13932299 - 13932398
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcca 272  Q
    ||||||||||||||||||||| ||||| ||||||| |       |||||||||||||||||||||||||| ||||  || || ||||||||||| |||||    
T  13932299 tgcacacttgaacaaatattaacatatccaattgaactttt---aataccttgttatcatcaaaacttaaagatgacaaagtcaaacacattttgttcca 13932395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 16032865 - 16032982
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgtt 255  Q
    |||||||||| |||| || ||||||||| |||||||||||||| ||||||| |       ||||||||||||||||||||||| |||  | ||||||||     
T  16032865 tttttgtctatggtcctgtacacttgaaaaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctaa--agggtaatgta 16032961  T
Q  256 aaacacattttattccaacag 276  Q
    ||||||||||| |||||||||    
T  16032962 aaacacattttgttccaacag 16032982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 16305057 - 16304928
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||||  ||||||| |||||||||||||||||||||||||||  ||||||   || ||||| | |||  ||| |||||   || |||    
T  16305057 gcaacacaagcttccttt--gtaaattacattgctctcatttgttcttccagaaccaatactttgttttaagacttataaaatttagtctattctcctgc 16304960  T
Q  176 acacttgaacaaatattagcatattcaattga 207  Q
    ||| |||||||||||||||||| | |||||||    
T  16304959 acatttgaacaaatattagcatgtccaattga 16304928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 22141129 - 22141246
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||||        ||||| |||||||||||||||  |||||||  | |||||||    
T  22141129 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgacaattttttaatactttgttatcatcaaaactcttaagg--gttaatgtt 22141226  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  22141227 aaacacattttgttccaaca 22141246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 24775261 - 24775149
Alignment:
Q  169 gtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacatttt 266  Q
    |||||| |||||||||||||||||| ||||||||||||| |       ||||| |||||||||||||||  |||||||  | ||||||||||||||||||    
T  24775261 gtcatgtacacttgaacaaatattaacatattcaattga-caatttttaatactttgttatcatcaaaactcttaagg--gttaatgttaaacacatttt 24775165  T
Q  267 attccaacagaatgta 282  Q
     |||||||| ||||||    
T  24775164 gttccaacaaaatgta 24775149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 29855812 - 29855928
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  |||||||||  |||||||    
T  29855812 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcttaaggat--taatgtt 29855908  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||| | ||||||||    
T  29855909 aaacacattatgttccaaca 29855928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 11223932 - 11224049
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgtta 256  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||| | | || | |||| |||    
T  11223932 ttttgtctatagtcttgtacacttgaacaaatattagcatatccaattga-caaattttaataccttgttatcatcaaaactctcaaga-gttaatatta 11224029  T
Q  257 aacacattttattccaacag 276  Q
    ||||||||||||||||||||    
T  11224030 aacacattttattccaacag 11224049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 15648103 - 15648201
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcca 272  Q
    ||||||||| ||||||||||||||||| |||||||         |||||||||||||| ||||||||||| || | |||||||||||||||||| |||||    
T  15648103 tgcacacttaaacaaatattagcatatccaattga---atttttaataccttgttatcgtcaaaacttaaaga-gataatgttaaacacattttgttcca 15648198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 17761904 - 17761801
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||| ||||| |||||| ||||||||||||||||||| ||||| ||||||| |       ||||||||||||| |||||||||||||| ||  |||||||    
T  17761904 ttttagtctatggtcatacacacttgaacaaatattatcatatccaattgaac---ttttaataccttgttattatcaaaacttaagg-tgacaatgtta 17761809  T
Q  257 aacacatt 264  Q
    ||||||||    
T  17761808 aacacatt 17761801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 19063224 - 19063121
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||| ||||| |||||| ||||||||||||||||||| ||||| ||||||| |       ||||||||||||| |||||||||||||| ||  |||||||    
T  19063224 ttttagtctatggtcatacacacttgaacaaatattatcatatccaattgaac---ttttaataccttgttattatcaaaacttaagg-tgacaatgtta 19063129  T
Q  257 aacacatt 264  Q
    ||||||||    
T  19063128 aacacatt 19063121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 26417459 - 26417378
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||| ||| |||| ||||||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  26417459 tttttgcctatggtcctgcacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 26417378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 52920790 - 52920907
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| | || || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | | ||||||||    
T  52920790 tttttgtctatgatcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaaggataatgtta 52920888  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  52920889 aacacattttgttccaaca 52920907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 6252581 - 6252522
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaacaga 277  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||| || |||||||    
T  6252581 aatactttgttatcattaaaacttaagg-tggtaatgttaaacacattttgtttcaacaga 6252522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 7477910 - 7478003
Alignment:
Q  178 acttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||  ||||||||||        ||||||||||| |||||||||||||||| ||||||||| ||||||||||| || |||||    
T  7477910 acttgaacaaatattagcaatttcaattgac---attttaataccttgttttcatcaaaacttaagg-tggtaatgtgaaacacattttgtttcaaca 7478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 19225777 - 19225825
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  19225777 tttgtctatggtcttgcgcacttgaacaaatattagcatattcaattga 19225825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 60 - 183
Target Start/End: Original strand, 19696048 - 19696169
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||||||| || |||||||||||||||  |||||||| | | |||||||||  ||||||||| ||||  ||||||   |||||||| |  || |||    
T  19696048 cttcagactctaacttgcaacataagcttcc--tttgtaaaatcctttgctctcacctgttcttcctgaaccaatactttgtttaaagacttacaaattt 19696145  T
Q  160 ttgtctaaggtcatgcacacttga 183  Q
    | ||||| ||||||||||||||||    
T  19696146 tagtctatggtcatgcacacttga 19696169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 20646540 - 20646656
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| |||| || ||||||||| |||||||||||||| ||||||| |       |||||||||||||||| ||||||     | |||||||||||    
T  20646540 ttttgtctatggtcctgtacacttgaaaaaatattagcatatccaattga-caatttttaataccttgttatcatgaaaactctcaaagggtaatgttaa 20646638  T
Q  258 acacattttattccaaca 275  Q
    ||||||||| ||||||||    
T  20646639 acacattttgttccaaca 20646656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 54284788 - 54284720
Alignment:
Q  140 aattaaagacatt-taactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||| |||||||| ||| |||||||||| |||| |||||||||| |||||||||||||||| |||||||    
T  54284788 aatttaagacattgtaaatttttgtctatggtcctgcacacttggacaaatattagcatatccaattga 54284720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 5216374 - 5216425
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  ||| || |||||||||||||||||||||||||||||||||    
T  5216374 tttttgtctatagtcctggacacttgaacaaatattagcatattcaattgac 5216425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 7920560 - 7920486
Alignment:
Q  164 ctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaactta 241  Q
    |||||||||||||||||||||||| |||||| |||| ||||||| |       |||||||||||||||||||||||||    
T  7920560 ctaaggtcatgcacacttgaacaagtattagtatatccaattgaac---ttttaataccttgttatcatcaaaactta 7920486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 15903644 - 15903703
Alignment:
Q  217 aataccttgttatcatcaaaact--taaggatggtaatgttaaacacattttattccaacag 276  Q
    |||||||||||||||||||||||  |||||  |||||||||||||||||||| |||||||||    
T  15903644 aataccttgttatcatcaaaactcttaagg--ggtaatgttaaacacatttttttccaacag 15903703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 46796159 - 46796108
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  ||| || |||||||||||||||||||||||||||||||||    
T  46796159 tttttgtctatagtcctgtacacttgaacaaatattagcatattcaattgac 46796108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 49642553 - 49642502
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||    
T  49642553 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgac 49642502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 11869471 - 11869585
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  || ||||  | |||||||    
T  11869471 ttttgtctatagtcttgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaagg--gttaatgtt 11869567  T
Q  256 aaacacattttattccaa 273  Q
    ||||||||||| ||||||    
T  11869568 aaacacattttgttccaa 11869585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 50300603 - 50300715
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    |||||||||| ||| || |||||||||||||||||| ||||| ||||||| |       |||||||||||||||||||||||   ||||  |||||||||    
T  50300603 ttttgtctaaagtcttgtacacttgaacaaatattaacatatccaattga-caatttttaataccttgttatcatcaaaact--cggat--taatgttaa 50300697  T
Q  258 acacattttattccaaca 275  Q
    ||||||||| ||| ||||    
T  50300698 acacattttgttctaaca 50300715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 53056501 - 53056387
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  |||||| |||||||||||||||||||||||| ||||| | |       |||| ||||||||||||||||  |||||||  | |||||||    
T  53056501 ttttgtctatagtcatgtacacttgaacaaatattagcatatacaatt-aacaatttttaatatcttgttatcatcaaaactcttaagg--gttaatgtt 53056405  T
Q  256 aaacacattttattccaa 273  Q
    ||||||||||| ||||||    
T  53056404 aaacacattttgttccaa 53056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 2028672 - 2028754
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||||  |||||| |||||||||||||||||||| ||| ||||||||        ||||| |||||||||||||||||    
T  2028672 tttttgtctatagtcatgtacacttgaacaaatattagcgtatccaattgacaattttttaatactttgttatcatcaaaact 2028754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 3522653 - 3522766
Alignment:
Q  161 tgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaaca 260  Q
    |||||| |||| || |||||||||||||||||||||||| ||||||| |       |||| ||||||||||||||||||     | ||||||||||||||    
T  3522653 tgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataacttgttatcatcaaaactctcaaagggtaatgttaaaca 3522751  T
Q  261 cattttattccaaca 275  Q
     ||||| ||||||||    
T  3522752 tattttgttccaaca 3522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 12726036 - 12725995
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcata 198  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  12726036 tttttgtctatggtcatgtacacttgaacaaatattagcata 12725995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 14969699 - 14969817
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| | || || |||||||||||||||||||||||| ||||||||        ||||||||| ||| || ||||||     | ||||||||||    
T  14969699 tttttgtctatgatcttgtacacttgaacaaatattagcatatccaattgacaattttttaataccttgatattattaaaactctcaaagggtaatgtta 14969798  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  14969799 aacacattttgttccaaca 14969817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 27851847 - 27852013
Alignment:
Q  106 ttgctctcatttgttcttccagaa-catatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaat 204  Q
    |||||||||||||||||||| ||| || ||||||   ||||||||    ||  ||| ||||| |||| |||| ||||||| ||||||||| |||| ||||    
T  27851847 ttgctctcatttgttcttcctgaatcaaatactttgtttaaagactcaaaaactttagtctatggtcctgcatacttgaaaaaatattagtatatccaat 27851946  T
Q  205 tgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||| |       ||| ||||||||||||||||| |||||| ||||||||||||| | ||||| ||||||||    
T  27851947 tgaactttt---aatgccttgttatcatcaaaatttaagg-tggtaatgttaaatagattttgttccaaca 27852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 37467687 - 37467735
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    |||||||||| | || || ||||||||||||||||||||||||||||||    
T  37467687 tttttgtctatgttcctgtacacttgaacaaatattagcatattcaatt 37467735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 40800211 - 40800291
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||| ||||||| |||||||||||||||||||||  | ||||||| |       |||||||||||||||||||||||    
T  40800211 ttttgtctatggtcatgtacacttgaacaaatattagcaagtccaattga-caatctttaataccttgttatcatcaaaact 40800291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 1470109 - 1470179
Alignment:
Q  170 tcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaag 243  Q
    ||||| |||||||||||||||||||||||| ||||||| |       |||||| ||||||||||||||||||||    
T  1470109 tcatgtacacttgaacaaatattagcatatccaattgaac---ttttaataccatgttatcatcaaaacttaag 1470179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 6091052 - 6091099
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||| |||||||  |||||||||||||| ||||||||||||||||    
T  6091052 aagcttcatttttgttgatttcattgctctcttttgttcttccagaac 6091099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 6091117 - 6091168
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| |||| || ||||||||||||||||||| |||| ||||||||    
T  6091117 tttttgtctatggtcctgtacacttgaacaaatattagaatatgcaattgac 6091168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 13824354 - 13824401
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  13824354 aagcttcctttttgttgattccattgctctcttttgttcttccagaac 13824401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 15903519 - 15903566
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  15903519 aagcttcctttttgttgattccattgctctcttttgttcttccagaac 15903566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 49642618 - 49642571
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  49642618 aagcttcctttttgttgattccattgctctcttttgttcttccagaac 49642571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 6174468 - 6174411
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||| || ||||||| ||||||||||| ||||||||||||||||||||| || |||||    
T  6174468 aatacttttttatcattaaaacttaagg-tggtaatgttaaacacattttgtttcaaca 6174411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 13824476 - 13824534
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||     | |||||||||||||| ||||||||||||||    
T  13824476 aataccttgttatcatcaaaactcttaaagggtaatgttaaacatattttattccaaca 13824534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 13948721 - 13948771
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||| |||| || ||| |||||||||||||||||||| |||||||    
T  13948721 tttttgtctatggtcctgtacatttgaacaaatattagcatatccaattga 13948771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 14955862 - 14955960
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaac--ttaaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||| ||||||| |       ||||| |||||||||| |||||  ||||||  | |||||||||||||||||| ||||||    
T  14955862 acacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcattaaaacttttaagg--gttaatgttaaacacattttgttccaa 14955958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 15552463 - 15552520
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||| ||||||||||| || |  ||||||||||||||||| ||||||||    
T  15552463 aataccttgttatcgtcaaaacttaaaga-gacaatgttaaacacattttgttccaaca 15552520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 19657845 - 19657747
Alignment:
Q  109 ctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||||||||||||| ||||||  ||||||   || ||||| | ||| | || ||||| |||| ||| |||||||||| |||||||||||| |||||||    
T  19657845 ctctcatttgttctttcagaaccaatactttgctttaagacttataaatcttagtctatggtcctgcccacttgaacagatattagcatatccaattga 19657747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 20311427 - 20311389
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  20311427 ggtcatgcacacttgaacatatattagcatatccaattg 20311389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 20627235 - 20627173
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||||||||||| |||||||||||||| |       |||||||||||||||||||||||    
T  20627235 acacttgaacaaatattggcatattcaattga-caatttttaataccttgttatcatcaaaact 20627173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 47208095 - 47208145
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||| |||  || |||||||||||||||||||||||| ||||||||    
T  47208095 ttttgtctatggttctgtacacttgaacaaatattagcatatccaattgac 47208145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 13558190 - 13558255
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggt-aatgttaaacacattttattccaacagaatgt 281  Q
    |||||||| |||||||||||||||||  ||| | | ||| ||||||||||| ||||||||||||||    
T  13558190 aataccttattatcatcaaaacttaataatgttcattgtgaaacacattttgttccaacagaatgt 13558255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 30054029 - 30053980
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  30054029 tttgtctatagtcttgtacacttgaacaaatattagcatatccaattgac 30053980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 1727779 - 1727747
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  1727779 acacttgaacaaatattagcatatccaattgac 1727747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 2785498 - 2785530
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  2785498 acacttgaacaaatattagcatatccaattgac 2785530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 2903005 - 2902973
Alignment:
Q  175 cacacttgaacaaatattagcatattcaattga 207  Q
    ||||||||||||||||||||||||| |||||||    
T  2903005 cacacttgaacaaatattagcatatccaattga 2902973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 7477847 - 7477898
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttctt 123  Q
    |||| ||||||||||||||||||    ||||||||||||||||||||||||||    
T  7477847 atcttgcaacataagcttcctttgaa-aaatttcattgctctcatttgttctt 7477898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 9510610 - 9510561
Alignment:
Q  225 gttatcatcaaaacttaaggatggtaatgttaaacacattttattccaacag 276  Q
    ||||||||||||||| || |  |||||||||||||||||||| |||||||||    
T  9510610 gttatcatcaaaactcaaag--ggtaatgttaaacacattttgttccaacag 9510561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 9518585 - 9518536
Alignment:
Q  225 gttatcatcaaaacttaaggatggtaatgttaaacacattttattccaacag 276  Q
    ||||||||||||||| || |  |||||||||||||||||||| |||||||||    
T  9518585 gttatcatcaaaactcaaag--ggtaatgttaaacacattttgttccaacag 9518536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 15851343 - 15851375
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  15851343 acacttgaacaaatattagcatatccaattgac 15851375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 21606440 - 21606472
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  21606440 acacttgaacaaatattagcatatccaattgac 21606472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 33591197 - 33591253
Alignment:
Q  219 taccttgttatcatcaaaact--taaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||  ||||| |  |||||||||||||||||| ||||||||    
T  33591197 taccttgttatcatcaaaactcttaagggt--taatgttaaacacattttgttccaaca 33591253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 41495293 - 41495341
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  ||| | |||||||| ||||||||||||||||    
T  41495293 taagcttcctttttgttgattcctttgctctcttttgttcttccagaac 41495341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 6e-47; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 24440603 - 24440425
Alignment:
Q  29 cagcttttgatggttcttcagacgttatctccttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccaga 128  Q
    |||||| ||||||| ||||||||| | ||| |||| |||||||||| |||||| |||||||||||||||||||| |||||||||| |||||||||| |||    
T  24440603 cagcttctgatggt-cttcagacgctctcttcttctgactctatcttgcaacacaagcttcctttttgtaaattccattgctctcgtttgttcttctaga 24440505  T
Q  129 acatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    || ||||||||   |||||||||  ||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  24440504 acctatacttgctctaaagacatacaactttttgtctatggtcctgctcacttgaacaaatattagcatattcaattgac 24440425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 21846406 - 21846597
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaac-tttttgtctaaggtcatgcacactt 181  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||   |||||||||||||| |||| |||||||||| |||| ||||||| |    
T  21846406 aagcttcctttttgtaaattttattgctctcatttgttctttcagaacctatgaatgaattaaagacatataacttttttgtctatggtcctgcacacct 21846505  T
Q  182 gaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||| ||||||||        ||||||||||||||||||||| || | ||||||||| ||||||||||||| ||||||||    
T  21846506 gaacaaatattagcatatccaattgac--atttttaataccttgttatcatcaaaatttcaagatggtaatattaaacacattttgttccaaca 21846597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 278
Target Start/End: Original strand, 24158130 - 24158324
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| |||| ||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||        ||| |||||  ||| |||    
T  24158130 atcttgcaaaataagtttccttttcgtaaatttcattgctctcatttgttctttcagaacctatacttgaatta--------taa-ttttttactatggt 24158220  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
    | ||||||||||||||||||||||||||| ||||| ||        |||||||||||||||||||||| ||||| ||||||||||||||||||||| |||    
T  24158221 cctgcacacttgaacaaatattagcatatccaattaac---attttaataccttgttatcatcaaaacctaagg-tggtaatgttaaacacattttgttc 24158316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 24302741 - 24302551
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaact-ttttgtctaaggtcatgcacactt 181  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||||||| |||| | |||| ||||  ||  |||||||||    
T  24302741 aagctccctttttgtaaatttcattgctctcatttgttcttccagaacctattcttgatataaagacacttaaatattttatctatagttctgcacactt 24302642  T
Q  182 gaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||| ||||||| |       ||||||||||||||||||||||| ||  | |||| ||||||||||||||| ||||||||    
T  24302641 gaacaaatattagcatatccaattga-cattttttaataccttgttatcatcaaaactcaa--agggtattgttaaacacattttgttccaaca 24302551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 207
Target Start/End: Original strand, 20569767 - 20569896
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||| ||||| ||| ||||   |||||||| |||  | |    
T  20569767 gcaacataagcttcctttttgtagattccattgctctcatttgttcttccagaacctatgcttgatttaaaaacacttaa--atttgtctatggttcttc 20569864  T
Q  176 acacttgaacaaatattagcatattcaattga 207  Q
    |||||||||||||| ||| ||||| |||||||    
T  20569865 acacttgaacaaatgttaacatatccaattga 20569896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 76 - 278
Target Start/End: Complemental strand, 15668422 - 15668226
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||||||||||||| ||  ||||||||||||| |||| ||||||||||||||||  || |||   ||||||||||   | |||| ||||| |||| |||    
T  15668422 gcaacataagcttccatt--gtaaatttcattgttctcctttgttcttccagaaccaattctttgtttaaagacataata-ttttagtctatggtcctgc 15668326  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaatacctt-gttatcatcaaaacttaaggatggtaatgttaaacacattttattccaac 274  Q
    |||||||||||||||||||||||| ||||||| |       ||||| || ||||||||||||||| || | ||||||||||||||||||||| |||||||    
T  15668325 acacttgaacaaatattagcatatccaattgaactttt---aatacgtttgttatcatcaaaactcaatg-tggtaatgttaaacacattttgttccaac 15668230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 41121539 - 41121352
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| ||||||| ||||||||||||| ||||| ||||||| ||  ||||||| | || |||| || |  |||| | ||||||||    
T  41121539 aagcttccttcttgtttattccattgctttcatttgttcttcgagaacttatactttaa--aaagacactaaatttttggt-tgtggtcctacacacttg 41121443  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||||||        ||||||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||    
T  41121442 aacaaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaactctaaag--ggtaatgttaaacacattttattccaaca 41121352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 18430724 - 18430536
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttttt-gtctaaggtcatgcacactt 181  Q
    |||||||||| ||||  |||  |||||||||||||||||||||||||| ||||||  |||||| |||| | || ||||| ||||| ||||  | ||||||    
T  18430724 aagcttccttcttgttgattatattgctctcatttgttcttccagaacctatactc-aattaa-gacactgaaattttttgtctatggtccagtacactt 18430627  T
Q  182 gaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||| ||||||||        |||||||| |||||||||||||| ||  | | |||||||||||||||||||||||||||    
T  18430626 gaacaaatattagcatatccaattgac-aatttttaataccttattatcatcaaaactcaa--aagttaatgttaaacacattttattccaaca 18430536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 44881463 - 44881585
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||| ||| | | ||  | ||||| | ||  ||||||||| |||| ||||||||||    
T  44881463 aagcttccttcttgttgatttcattgctctcatttgttcttccagaacctatgccttaaaaagagacactaaa--ttttgtctatggtcctgcacacttg 44881560  T
Q  183 aacaaatattagcatattcaattga 207  Q
    ||||||||||||||||| |||||||    
T  44881561 aacaaatattagcatatccaattga 44881585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 281
Target Start/End: Original strand, 40782851 - 40782974
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  40782851 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 40782949  T
Q  257 aacacattttattccaacagaatgt 281  Q
    |||||||||| |||||||| |||||    
T  40782950 aacacattttgttccaacacaatgt 40782974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 25918915 - 25919036
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||  |||| |   || ||||| | ||| |||| ||||| |||| | |    
T  25918915 gcaacataagcttccttt--gtaaattccattgctctcatttgttcttctagaaccaataccttgttttaagacttataaattttagtctatggtcttac 25919012  T
Q  176 acacttgaacaaatattagcatat 199  Q
    ||||||||||||||||||||||||    
T  25919013 acacttgaacaaatattagcatat 25919036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 24844412 - 24844507
Alignment:
Q  112 tcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||||||||||||||||| ||| ||||  ||||||| | | || |||||||||| | || ||||||||||||||||||||||||||| |||||||    
T  24844412 tcatttgttcttccagaacctatgcttggtttaaagatactcaaatttttgtctatgatcctgcacacttgaacaaatattagcatatccaattga 24844507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 25829484 - 25829601
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||| |    | ||||||||||    
T  25829484 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaaccttcaaagggtaatgtta 25829582  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  25829583 aacacattttgttccaaca 25829601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 20151770 - 20151654
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| ||||||| |||||||||||||||||| ||||| ||||| ||        |||||||||||||||||||||| | |  | |||||||||||    
T  20151770 ttttgtctatggtcatgtacacttgaacaaatattaccatatccaatttacaattttttaataccttgttatcatcaaaacctca-aagggtaatgttaa 20151672  T
Q  258 acacattttattccaaca 275  Q
    ||||||||| ||||||||    
T  20151671 acacattttgttccaaca 20151654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 14867551 - 14867618
Alignment:
Q  141 attaaagacatt-taactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||| |||||||    
T  14867551 attaaagacattgtaaatttttgtctatgatcatgcacacttgaacaaatattagcatatccaattga 14867618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 20568468 - 20568417
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  20568468 tttttgtctatggtcatgtacacttgaacaaatattagcatattcaattgac 20568417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 22383862 - 22383965
Alignment:
Q  175 cacacttgaacaaatattagcatattcaattgaccnnnnnnnaatacctt-gttatcatcaaaacttaaggatggtaatgttaaacacattttattccaa 273  Q
    ||||||||||||||||||||||||| ||||||||        |||||||| ||||||||||||| |||||| |||||||||  |||||||||| ||||||    
T  22383862 cacacttgaacaaatattagcatatccaattgac-ttattttaatacctttgttatcatcaaaatttaagggtggtaatgtacaacacattttgttccaa 22383960  T
Q  274 cagaa 278  Q
    |||||    
T  22383961 cagaa 22383965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 277
Target Start/End: Original strand, 25189749 - 25189852
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcca 272  Q
    ||||||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | |||| |||||||||||||||||||||    
T  25189749 tgcacacttgaacaaatattagcatatccaattga-cattttttaataccttgttatcatcaaaactctcaaagggtattgttaaacacattttattcca 25189847  T
Q  273 acaga 277  Q
    |||||    
T  25189848 acaga 25189852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 276
Target Start/End: Complemental strand, 21536969 - 21536851
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  21536969 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 21536871  T
Q  257 aacacattttattccaacag 276  Q
    ||||||| || |||||||||    
T  21536870 aacacatgttgttccaacag 21536851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 28700913 - 28700815
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact--taaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||  ||||| |  |||||||||||||||||||||||||    
T  28700913 acacttgaacaaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaactcttaagggt--taatgttaaacacattttattccaa 28700817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 28711414 - 28711316
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||  |||||||  | |||||||||||||||||| ||||||    
T  28711414 acacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaactcttaagg--gttaatgttaaacacattttgttccaa 28711318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 17966869 - 17966752
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| |  |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||||     | ||||||||||    
T  17966869 tttttgtctatggtcctatacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactctcaaagggtaatgtta 17966771  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||||||||||||    
T  17966770 aacacattttattccaaca 17966752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 22317992 - 22318109
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | |||||| |||    
T  22317992 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatttta 22318090  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  22318091 aacacattttgttccaaca 22318109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 26618892 - 26618705
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| ||||||||||||||||||||||||| | ||| ||| ||  | ||||| | || |||||||||| |||| ||||||||||    
T  26618892 aagcttccttcttgttgattccattgctctcatttgttcttccagatc-tatgctttaaa-agagacactaaa-tttttgtctatggtcctgcacacttg 26618796  T
Q  183 aacaaatattagcatat-tcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||  || |||| |       |||| |||||||| ||||||||| ||  | |||||||||||||||||||| ||||||||    
T  26618795 aacaaatattagcatatcccagttga-caatttttaatatcttgttattatcaaaactcaa--agggtaatgttaaacacattttgttccaaca 26618705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 38631334 - 38631451
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||| | ||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  38631334 tttttgtctatggtcatgtacacttgaacaaatattaacttatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 38631432  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  38631433 aacacattttgttccaaca 38631451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 38781760 - 38781877
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| || |||| |       ||||||||||||||||||||||||    | | ||||||||    
T  38781760 tttttgtctatggtcctgtacacttgaacaaatattagcatatccagttga-caatttttaataccttgttatcatcaaaacttttaaaggataatgtta 38781858  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  38781859 aacacattttgttccaaca 38781877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 6573858 - 6573741
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| |||| || |||||||||||||||||||||||| ||||||||        ||||| |||||||||||||||| |    | ||||||||||     
T  6573858 ttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgacaatttttcaatacattgttatcatcaaaacctttaaagggtaatgttat 6573759  T
Q  258 acacattttattccaaca 275  Q
    ||||||||| ||||||||    
T  6573758 acacattttgttccaaca 6573741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 24576429 - 24576480
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  24576429 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaattgac 24576480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 31800583 - 31800485
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||||||||||| |       |||||||| ||||||||||||  |||||||  | |||||||||||||||||| ||||||    
T  31800583 acacttgaacaaatattagcatattcaattga-caatttttaataccttattatcatcaaaactcttaagg--gttaatgttaaacacattttgttccaa 31800487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 13963730 - 13963613
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| ||||||||||||||||||||||||  |||||| |       |||||||| ||||||||||||||     | |||||| |||    
T  13963730 tttttgtctatggtcatgtacacttgaacaaatattagcatatctaattga-caatttttaataccttattatcatcaaaactctcaaagggtaatatta 13963632  T
Q  257 aacacattttattccaaca 275  Q
    || ||||||||||||||||    
T  13963631 aagacattttattccaaca 13963613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 19115439 - 19115625
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||||||  |||  ||| ||||||||||||||||||||||||||| |||  || ||  | ||||| | || ||| |||||| || | |||| |||||    
T  19115439 aagcttccttcctgttgattccattgctctcatttgttcttccagaacctatggtttaa--agagacactaaa-tttgtgtctatggccctgcatacttg 19115535  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||  ||||||         ||||| ||||||||||||||||| || |  |||||||||||||||||||| ||||||||    
T  19115536 aacaaatattagcatatcaaattgat-aatttttaatactttgttatcatcaaaactcaaag--ggtaatgttaaacacattttgttccaaca 19115625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 19643440 - 19643372
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||| ||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||    
T  19643440 ggtcctgcacacttgaacaaatattagcatattcaattgaac---ttgtaataccttgttatcatcaaaact 19643372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 22524646 - 22524545
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||| |||||||||||||||||  |||||||  || ||||||| ||| |||| || || | ||  |||||||||||||||||||| ||||| |||||    
T  22524646 ttgctctaatttgttcttccagaaccaatacttggttttaagacatataaattttagtttatgatcccgcacacttgaacaaatattaacatatccaatt 22524547  T
Q  206 ga 207  Q
    ||    
T  22524546 ga 22524545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 275
Target Start/End: Complemental strand, 45086843 - 45086738
Alignment:
Q  169 gtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttat 268  Q
    |||||| |||||||||||||||||||||||||||||||| |       |||||||| ||||||||||||||     | | |||||||| |||||||||||    
T  45086843 gtcatgtacacttgaacaaatattagcatattcaattga-caatttttaataccttattatcatcaaaactctttaaggttaatgttagacacattttat 45086745  T
Q  269 tccaaca 275  Q
    |||||||    
T  45086744 tccaaca 45086738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 154 - 275
Target Start/End: Complemental strand, 10009490 - 10009371
Alignment:
Q  154 aactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatg 253  Q
    ||||||||||||| |||| || ||||||||||||||||||| |||| ||||||| |       |||| ||||||||||||||||||     | |||||||    
T  10009490 aactttttgtctatggtcttgtacacttgaacaaatattagtatatccaattga-caatttttaata-cttgttatcatcaaaactctcaaagggtaatg 10009393  T
Q  254 ttaaacacattttattccaaca 275  Q
    ||||||||||||| ||||||||    
T  10009392 ttaaacacattttgttccaaca 10009371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 23184099 - 23183984
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaa 258  Q
    ||||| || |||| |||||||||||||||||||||| |||| ||||||| |       |||||||||||||||||||||||     | | ||||||||||    
T  23184099 tttgtatatggtcttgcacacttgaacaaatattagtatatccaattga-caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaa 23184001  T
Q  259 cacattttattccaaca 275  Q
    |||||||| ||||||||    
T  23184000 cacattttgttccaaca 23183984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 23595356 - 23595241
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaa 258  Q
    ||||| || |||| |||||||||||||||||||||| |||| ||||||| |       |||||||||||||||||||||||     | | ||||||||||    
T  23595356 tttgtatatggtcttgcacacttgaacaaatattagtatatccaattga-caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaa 23595258  T
Q  259 cacattttattccaaca 275  Q
    |||||||| ||||||||    
T  23595257 cacattttgttccaaca 23595241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 9015077 - 9014971
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    ||||||| |||||||||||||||||| ||||| ||||||| |       |||||||||||||||||||||||     | ||||| ||||||||||||||     
T  9015077 ggtcatgtacacttgaacaaatattaacatatccaattga-caatttttaataccttgttatcatcaaaactcttaaagggtaaagttaaacacattttg 9014979  T
Q  268 ttccaaca 275  Q
    ||||||||    
T  9014978 ttccaaca 9014971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 10896240 - 10896170
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaa 146  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||||| |||||||| ||| ||||| |||||    
T  10896240 gcaacacaagcttcccttttgtagtttttattgctctcatttgttcctccagaacctatgcttgatttaaa 10896170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 24793704 - 24793622
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagc-atattcaattgaccnnnnnnnaataccttgttatcatcaaaactta 241  Q
    |||||||| ||||||| |||||||||||||||||||| |||| ||||||| |       |||||||||||||||||||||||||    
T  24793704 tttgtctatggtcatgtacacttgaacaaatattagcaatatccaattga-caatttttaataccttgttatcatcaaaactta 24793622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 24850375 - 24850269
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    |||| ||||||||||||||||||||||||||| ||||||| |       ||||||||||||| |||||||||     | ||||||||||||||||||||     
T  24850375 ggtcctgcacacttgaacaaatattagcatatccaattga-caacttttaataccttgttataatcaaaactctcaaagggtaatgttaaacacattttg 24850277  T
Q  268 ttccaaca 275  Q
    ||| ||||    
T  24850276 ttctaaca 24850269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 22187839 - 22187758
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| |||| || | |||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  22187839 tttttgtctatggtcctgtatacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 22187758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 24377449 - 24377566
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||  || |||||||||||||||||||||||| ||||||| |       |||||||||| ||||||||||| |    | | ||||||||    
T  24377449 tttttgtctatggttttgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgtcatcatcaaaacattcaaaggataatgtta 24377547  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  24377548 aacacattttgttccaaca 24377566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 31967769 - 31967649
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaagga-tggtaatg 253  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  |||||||| |  || ||    
T  31967769 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaaggattattattg 31967671  T
Q  254 ttaaacacattttattccaaca 275  Q
    ||||||||||||| ||||||||    
T  31967670 ttaaacacattttgttccaaca 31967649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 239
Target Start/End: Complemental strand, 33705842 - 33705698
Alignment:
Q  92 ttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatat 191  Q
    ||||||||||||  ||||||||||||||||||| |||||  |||| |   || ||||| | ||| |||| ||||| | || || |||||| |||||||||    
T  33705842 ttttgtaaatttttttgctctcatttgttcttctagaaccgataccttgttttaagacttataaattttagtctatgatcctgaacacttaaacaaatat 33705743  T
Q  192 tagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||  |||||| |       |||||||||||||||||||||||    
T  33705742 tagcatatctaattgaac---ttttaataccttgttatcatcaaaact 33705698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 34321622 - 34321505
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  |||||||  | || |||    
T  34321622 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaagg--gttattgt 34321526  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  34321525 taaacacattttgttccaaca 34321505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 18703160 - 18703273
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaa 258  Q
    |||||||| |||  ||||||| |||| ||||||||||| || ||||||||        ||||||||||||||||||||||| ||  | ||||||||||||    
T  18703160 tttgtctatggttctgcacacatgaataaatattagcacatccaattgac-aatttttaataccttgttatcatcaaaactcaa--agggtaatgttaaa 18703256  T
Q  259 cacattttattccaaca 275  Q
    |||||||| || |||||    
T  18703257 cacattttgtttcaaca 18703273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 27640015 - 27639971
Alignment:
Q  163 tctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||    
T  27640015 tctatggtcctgcacacttgaacaaatattaacatattcaattga 27639971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 30667369 - 30667485
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||||||| ||| || |||||||||||| ||||||||||| ||||||| |       |||||||||| ||||||||||||  |  | ||||||||||    
T  30667369 tttttgtctaaagtcctgtacacttgaacaattattagcatatccaattga-caatttttaataccttgtaatcatcaaaactctaaaagggtaatgtta 30667467  T
Q  257 aacacattttattccaac 274  Q
    |  ||||||| |||||||    
T  30667468 agaacattttgttccaac 30667485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 31327675 - 31327559
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  |||||| || ||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  ||||||| |  | |||||    
T  31327675 ttttgtctatagtcatgtacgcttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaaggtt--tgatgtt 31327579  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  31327578 aaacacattttgttccaaca 31327559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 31334396 - 31334280
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  |||||| || ||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  ||||||| |  | |||||    
T  31334396 ttttgtctatagtcatgtacgcttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaaggtt--tgatgtt 31334300  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  31334299 aaacacattttgttccaaca 31334280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 3277384 - 3277423
Alignment:
Q  169 gtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  3277384 gtcatgtacacttgaacaaatattagcatatccaattgac 3277423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 239
Target Start/End: Complemental strand, 19320216 - 19320086
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||| |||||||||||||||||||  ||||||   || || ||||  || |||| || || |||| |||||||||||| ||||||||  ||||||||||    
T  19320216 ttgctttcatttgttcttccagaactaatactttgttttaaaacataaaatttttagtttatggtcctgcacacttgaaaaaatattaatatattcaatt 19320117  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    || |       |||||||||||||||||||||||    
T  19320116 gaac---ttttaataccttgttatcatcaaaact 19320086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 22272447 - 22272630
Alignment:
Q  86 cttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaac 185  Q
    ||||||| ||||  ||| ||||||||||||||||||||||||||| ||| ||| ||  | ||||| | ||  |||||| || |||  |||||||||||||    
T  22272447 cttccttcttgttgattccattgctctcatttgttcttccagaacctatgctttaa-aagagacactaaa--ttttgt-tatggttctgcacacttgaac 22272542  T
Q  186 aaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||| |||||  |||||| |       ||||| ||||||||||||||||| |||  | |||||||||||| ||||||| ||||||||    
T  22272543 aaatattaacatatctaattga-caatttttaatacattgttatcatcaaaactctaa--agggtaatgttaaatacattttgttccaaca 22272630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 199
Target Start/End: Original strand, 22683771 - 22683802
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatat 199  Q
    ||||||||||||||||||||||||||||||||    
T  22683771 ggtcatgcacacttgaacaaatattagcatat 22683802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 23235387 - 23235438
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| |||| || |||||||||||||||||||||||| || |||||    
T  23235387 tttttgtctatggtcctgtacacttgaacaaatattagcatatccagttgac 23235438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 40332462 - 40332513
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||| ||| ||||||||    
T  40332462 tttttgtctatagtcatgtacacttgaacaaatattagcgtatccaattgac 40332513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 22802855 - 22802905
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  22802855 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgac 22802905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 25196351 - 25196408
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||||| || | ||||| | ||||||||||||| ||||||||    
T  25196351 aataccttgttatcatcaaaactcaaag-tggtattcttaaacacatttttttccaaca 25196408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 26712920 - 26712958
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  26712920 ggtcatacacacttgaacacatattagcatattcaattg 26712958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 21910845 - 21910796
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    ||||| |||| |||| ||||||||||||||| ||||| ||||||||||||    
T  21910845 tttttttctatggtcctgcacacttgaacaagtattatcatattcaattg 21910796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 22260786 - 22260835
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||||||| |||| || ||||||||| |||||||||||||| |||||||    
T  22260786 ttttgtctatggtcctgtacacttgaataaatattagcatatccaattga 22260835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 27940347 - 27940376
Alignment:
Q  170 tcatgcacacttgaacaaatattagcatat 199  Q
    ||||||||||||||||||||||||||||||    
T  27940347 tcatgcacacttgaacaaatattagcatat 27940376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 33241002 - 33241047
Alignment:
Q  162 gtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||| |||| |||||| |||||||||||||||||||| |||||||    
T  33241002 gtctatggtcttgcacatttgaacaaatattagcatatccaattga 33241047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 33248923 - 33248968
Alignment:
Q  162 gtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||| |||| |||||| |||||||||||||||||||| |||||||    
T  33248923 gtctatggtcttgcacatttgaacaaatattagcatatccaattga 33248968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 10896110 - 10896051
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaacaga 277  Q
    ||||| |||||||||||||| || || | ||||| ||| ||||||||||||||||||||||    
T  10896110 aatacattgttatcatcaaagctcaaag-tggtattgtcaaacacattttattccaacaga 10896051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 25829418 - 25829466
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  ||| | |||||||| ||||||||||||||||    
T  25829418 taagcttcctttttgttgattcctttgctctcttttgttcttccagaac 25829466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 33074642 - 33074674
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  33074642 acacttgaacaaatattagcatatccaattgac 33074674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 44366864 - 44366816
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||||||  ||| || |||||||||||||||||||||||| |||||    
T  44366864 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaatt 44366816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 94; Significance: 9e-46; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 85 - 275
Target Start/End: Complemental strand, 4061 - 3875
Alignment:
Q  85 gcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaa 184  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||  |||||||||| |||||| | ||| | |||||| |  ||| ||||||||||||    
T  4061 gcttcctttttgtaaattccattgccctcatttgttctttcagaactcatacttgaatcaaagacttataaatgtttgtcaatagtcctgcacacttgaa 3962  T
Q  185 caaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  3961 caaatattagcatattcaattgac---attttaataccttgttatcatcaaaacttaa-gatggtaatgttaaacacattttgttccaaca 3875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 85 - 275
Target Start/End: Complemental strand, 11344 - 11158
Alignment:
Q  85 gcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaa 184  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||  |||||||||| |||||| |  |  |||||||| | |||| ||||||||||||    
T  11344 gcttcctttttgtaaattccattgccctcatttgttctttcagaactcatacttgaatcaaagacttaaagatttttgtcaatggtcctgcacacttgaa 11245  T
Q  185 caaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  11244 caaatattagcatatccaattgac---attttaataccttgttatcatcaaaacttaa-catggtaatgttaaacacattttattccaaca 11158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 83 - 279
Target Start/End: Complemental strand, 2436 - 2244
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||| |||||||||| | || | ||||||||    
T  2436 aagcttactttttgtagatttcattgctctcatttgttcttccagaacctatgcttgaattaaagaca-ctaaatttttgtctatgatcctacacacttg 2338  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaacagaat 279  Q
    ||||||||||||||||||||||||| |       ||||||||||||||||||||||| ||  | |||||||||||| ||||||| ||||||||||||    
T  2337 aacaaatattagcatattcaattga-cattttttaataccttgttatcatcaaaactcaa--agggtaatgttaaatacattttgttccaacagaat 2244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 7631 - 7826
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| ||||||||||||||||||||  ||||| ||||||||||||| ||||||  |||||||||||||| || | ||| |||||||| | |||| |||    
T  7631 gcaacacaagcttcctttttgtaaattctattgccctcatttgttctttcagaactcatacttgaattaaatacttataaatttttgtcaatggtcctgc 7730  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||| ||||||||||||||||| ||||||||        |||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||    
T  7731 acacttaaacaaatattagcatatccaattgac---attttaataccttgttatcatcaaaacttaa-gatgataatgttaaacacattttgttccaaca 7826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 5e-44; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 23590031 - 23590227
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||| ||||||||||| || ||| ||||||| |||| |||    
T  23590031 gcaacacaagcttcctttttgtaaatttcat-gctctcatttgttcttcaagaacctaaacttgtattaaagacatatatcttcttgtctatggtcctgc 23590129  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||| ||||| ||||||| |       |||||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||    
T  23590130 acacttgaacaaatattaacatatccaattga-cactttttaataccttgttatcatcaaaacttaaag-tggtattgttaaacatattttgttccaaca 23590227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 275
Target Start/End: Original strand, 20969508 - 20969686
Alignment:
Q  93 tttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatatt 192  Q
    |||||||||| |||||||||||||||||||| |||||   ||||||||||| ||||| | ||| || ||||||| |||| ||||||||| ||||||||||    
T  20969508 tttgtaaattccattgctctcatttgttctttcagaaacaatacttgaatttaagacttataaattcttgtctatggtcttgcacacttaaacaaatatt 20969607  T
Q  193 agcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||| ||||||||        || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  20969608 agcatatccaattgac---tttttaagaccttgttatcatcaaaacttaagg-tggtaatgttaaacacattttgttccaaca 20969686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 275
Target Start/End: Complemental strand, 22403934 - 22403754
Alignment:
Q  91 tttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaata 190  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||||||| |||| | ||||||||||||||||    
T  22403934 tttttgtagattccattgctctcatttgttcttccataacatatgcttgaattaaagaca-ctaaatttttgtctatggtcctccacacttgaacaaata 22403836  T
Q  191 ttagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||| |||||| |       |||| |||||||||||||||||| ||  | |||||||||| ||||||||||||||||||    
T  22403835 ttagcatatttaattga-cattttttaatatcttgttatcatcaaaactcaa--agggtaatgttacacacattttattccaaca 22403754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 148 - 276
Target Start/End: Original strand, 26251445 - 26251572
Alignment:
Q  148 acatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatg 247  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||||| | ||    
T  26251445 acatttaactttttgtctatggtcctgcgcacttgaacaaatattagcatatccaattga-cattttttaataccttgttatcatcaaaacttaaaggtg 26251543  T
Q  248 gtaatgttaaacacattttattccaacag 276  Q
    ||| ||||||||||||||| |||||||||    
T  26251544 gtagtgttaaacacattttgttccaacag 26251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 20237242 - 20237076
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttttt-gtctaaggtcatgcacacttgaacaaatattagcatattcaat 204  Q
    |||||||||||||||||||||||||  ||||||   |||||||| | |||  |||| ||||| | || ||||||||||||||||||||||||||| ||||    
T  20237242 ttgctctcatttgttcttccagaaccaatactttgtttaaagacttataaaattttagtctatgatcttgcacacttgaacaaatattagcatatccaat 20237143  T
Q  205 tgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||| |       |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  20237142 tgaactttt---aataccttgttatcatcaaaacttaagg-tggcaatgttaaacacattttgttccaaca 20237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 78 - 275
Target Start/End: Original strand, 34638769 - 34638964
Alignment:
Q  78 aacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttga-at-taaagacatttaactttttgtctaaggtcatgc 175  Q
    |||| ||||| |||||||||| | | ||||||||| ||||||||||| ||||| ||| ||||| || |||||||||| || |||||||| |  ||| |||    
T  34638769 aacacaagctccctttttgtagaatccattgctctaatttgttcttctagaacctatgcttgatatataaagacattaaa-tttttgtccattgtcctgc 34638867  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||| |||||||         ||||||||||||||||||||||| ||  | |||||||||||||||||||||||||||||    
T  34638868 acacttgaacaaatattagcatatccaattga--tattcttaataccttgttatcatcaaaactcaa-aagggtaatgttaaacacattttattccaaca 34638964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 265
Target Start/End: Original strand, 13692667 - 13692862
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaatt-aaagacatttaactt 158  Q
    ||||||||||| ||| |||||||||| |||||||  |||||||||||||||||| | ||||||| ||||||  |||||||||||  ||||| | ||| ||    
T  13692667 cttcagactctgtcttgcaacataagtttccttt--gtaaatttcattgctctcttatgttctttcagaaccaatacttgaattctaagacttataattt 13692764  T
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaa 258  Q
    |||||||| ||||     | ||||||||||||||||||||| ||||||||        |||||||||||||| ||||||||||| |||||||||||||||    
T  13692765 tttgtctatggtc-----ctcttgaacaaatattagcatatccaattgac---ttttcaataccttgttatcgtcaaaacttaa-gatggtaatgttaaa 13692855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 26119667 - 26119475
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||||||||||  |||||  |||||||| |||        ||| |||||| |||  ||    
T  26119667 atcttgcaacacaagcttcctttttgtaaatttcattgttctcatttgttctttaagaactaatacttgactta--------taa-tttttgactagtgt 26119577  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
    | |||||||||||| |||||||| ||||| |||||| |        ||||||||||||||||||||| |||| | ||||| |||||||||| |||| |||    
T  26119576 cctgcacacttgaaaaaatattaccatatccaattggc---agtttaataccttgttatcatcaaaatttaaaggtggtagtgttaaacactttttgttc 26119480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 86 - 263
Target Start/End: Complemental strand, 25096644 - 25096472
Alignment:
Q  86 cttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaac 185  Q
    ||||||| ||||  |||||||||||||||||||||||  |||||| ||  ||| || |||| ||   ||| |||||||||| |||| |||||| ||||||    
T  25096644 cttccttcttgttgatttcattgctctcatttgttctcacagaacctacgctttaagtaaacac---taaatttttgtctatggtcctgcacatttgaac 25096548  T
Q  186 aaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacat 263  Q
    |||||||||||||||||||| | |       ||||||||||||||||||||||| |||  | |||||||||||||||||    
T  25096547 aaatattagcatattcaatt-aacaatttttaataccttgttatcatcaaaactctaa--agggtaatgttaaacacat 25096472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 86 - 263
Target Start/End: Complemental strand, 25154614 - 25154442
Alignment:
Q  86 cttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaac 185  Q
    ||||||| ||||  |||||||||||||||||||||||  |||||| ||  ||| || |||| ||   ||| |||||||||| |||| |||||| ||||||    
T  25154614 cttccttcttgttgatttcattgctctcatttgttctcacagaacctacgctttaagtaaacac---taaatttttgtctatggtcctgcacatttgaac 25154518  T
Q  186 aaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacat 263  Q
    |||||||||||||||||||| | |       ||||||||||||||||||||||| |||  | |||||||||||||||||    
T  25154517 aaatattagcatattcaatt-aacaatttttaataccttgttatcatcaaaactctaa--agggtaatgttaaacacat 25154442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 33023030 - 33023147
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| |||| || |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||| |    | |||||||||||    
T  33023030 ttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgacaattttttaataccttgttatcatcaaaaccttcaaagggtaatgttaa 33023129  T
Q  258 acacattttattccaaca 275  Q
    ||||||||| ||||||||    
T  33023130 acacattttgttccaaca 33023147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 205
Target Start/End: Complemental strand, 2152786 - 2152645
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||| || ||| |||||  |||||||||||  ||| |||  |||||| ||||||||||||||| ||| ||| ||||| ||||||||| |||| |||    
T  2152786 cttcagacgctttcttgcaactcaagcttccttt--gtagattcaattgctttcatttgttcttccataacctatgcttgatttaaagacacttaaattt 2152689  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
      ||||| |||| | ||||||||||||||||||||||||| |||||    
T  2152688 --gtctatggtcctacacacttgaacaaatattagcatatccaatt 2152645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 275
Target Start/End: Complemental strand, 18672552 - 18672380
Alignment:
Q  100 atttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttttt-gtctaaggtcatgcacacttgaacaaatattagcata 198  Q
    |||||||||||||||||||||||| ||||||  || | | |||||||||| | ||| ||||| ||||| | |  ||||||||||||||||||||| ||||    
T  18672552 atttcattgctctcatttgttctttcagaaccaattccttaattaaagacttataaatttttagtctatgtttctgcacacttgaacaaatattaacata 18672453  T
Q  199 ttcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||| |       ||||| || |||||||||||||| |||| ||| |||| ||||||||||||  |||||||    
T  18672452 ttcaattgaac---ttttaatacttttttatcatcaaaactaaagg-tggcaatgctaaacacattttgctccaaca 18672380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 17815349 - 17815466
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |    | | ||||||||    
T  17815349 tttttgtctatggtcttgtacacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaaccttcaaaggataatgtta 17815447  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  17815448 aacacattttgttccaaca 17815466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 23412762 - 23412645
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| ||||||||||||||||||||| || ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  23412762 tttttgtctatggtcatgtacacttgaacaaatattagcaaatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 23412664  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  23412663 aacacattttgttccaaca 23412645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 19536056 - 19535939
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || | |||||||||||||||||| ||| ||||||||        ||||||||||||||||||||||||    | ||||||||||    
T  19536056 tttttgtctatggtcctgtatacttgaacaaatattagcctatccaattgac-aatttttaataccttgttatcatcaaaactttcaaagggtaatgtta 19535958  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  19535957 aacacattttgttccaaca 19535939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 6512219 - 6512103
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||| |    | |||||||||||    
T  6512219 ttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaaccttcaaagggtaatgttaa 6512121  T
Q  258 acacattttattccaaca 275  Q
    ||| ||||| ||||||||    
T  6512120 acagattttgttccaaca 6512103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27057561 - 27057698
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||||||||| ||| |||||||||||||||  ||||  ||||||||||||||| ||||||| | || |||  ||||||| ||  || || | ||| ||     
T  27057561 cttcagactctgtcttgcaacataagcttcc--tttgctaatttcattgctctcttttgttccttcaaaaccaatacttggatataatacttataaatta 27057658  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatat 199  Q
    || |||| | || |||||||||||||||||||||||||||    
T  27057659 ttttctatgatcctgcacacttgaacaaatattagcatat 27057698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 12352580 - 12352474
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    |||| ||||||||||||||||||||| ||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||||||||||||     
T  12352580 ggtcctgcacacttgaacaaatattaacatatacaattga-cgatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttg 12352482  T
Q  268 ttccaaca 275  Q
    ||||||||    
T  12352481 ttccaaca 12352474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 26118459 - 26118330
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||| | |||||||||||||||  ||||||   || ||||||| ||| |||| ||||| |||  ||||||||||||||| ||||| |||||||||||    
T  26118459 ttgctctaaattgttcttccagaaccaatactttgttttaagacatataaattttagtctatggttctgcacacttgaacaattattaacatattcaatt 26118360  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaac 238  Q
    || |       ||||||||||||||||||||||    
T  26118359 gaac---attaaataccttgttatcatcaaaac 26118330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 31588796 - 31588682
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||| || |||| ||||||||| ||||||||||||||||| |||||||         |||||||||||| ||||| ||||||||| |||| ||||||    
T  31588796 tttttgtttatggtcttgcacactttaacaaatattagcatatccaattga---aattttaataccttgttaccatcagaacttaagg-tggtcatgtta 31588701  T
Q  257 aacacattttattccaaca 275  Q
    |||| ||||| ||||||||    
T  31588700 aacatattttgttccaaca 31588682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 39798639 - 39798582
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||    
T  39798639 aataccttgttatcatcaaaaattaagg-tggtaatgttaaatacattttgttccaaca 39798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 7745418 - 7745301
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    |||||||||| |||  || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  |||||  | ||| ||||    
T  7745418 tttttgtctatggttctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaaatcttaa--agggtgatgt 7745322  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  7745321 taaacacattttgttccaaca 7745301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 21910909 - 21911026
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| | || || |||||||||||||||||||||||| ||||||| |       |||||||| ||||||||||||||     | ||||||||||    
T  21910909 tttttgtctatgatcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttattatcatcaaaactctcaaagggtaatgtta 21911007  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  21911008 aacacattttgttccaaca 21911026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 4887389 - 4887505
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  |||||||  | |||||||    
T  4887389 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaagg--gttaatgtt 4887485  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  4887486 aaacacattttgttccaaca 4887505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 14086308 - 14086193
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||||        |||| ||||||||||||||||  |||||||||  || ||||    
T  14086308 ttttgtctatagtcttgtacacttgaacaaatattagcatatccaattgac--aattttaatatcttgttatcatcaaaactcttaaggat--tagtgtt 14086213  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  14086212 aaacacattttgttccaaca 14086193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 15517354 - 15517405
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||| |||||| | |||||||||||||||||||||| ||||||||    
T  15517354 tttttgtctaaagtcatgtatacttgaacaaatattagcatatccaattgac 15517405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 27275976 - 27275887
Alignment:
Q  179 cttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcca 272  Q
    ||||||||||||||||||||||||||||| |       |||||||||  ||||||||||| ||||| || |||||||||||||||||| |||||    
T  27275976 cttgaacaaatattagcatattcaattgaac---ttttaataccttggaatcatcaaaacataagg-tgataatgttaaacacattttgttcca 27275887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 28139955 - 28140006
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  28139955 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattgac 28140006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 30743394 - 30743445
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  30743394 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattgac 30743445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 642454 - 642348
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    |||| ||||||||||||||||||||||||||| ||||||| |       |||||||| |||| |||||||||     | ||||||||||||| |||||||    
T  642454 ggtcctgcacacttgaacaaatattagcatatccaattga-caatttttaataccttattattatcaaaactctcaaagggtaatgttaaacccatttta 642356  T
Q  268 ttccaaca 275  Q
    ||||||||    
T  642355 ttccaaca 642348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 21198797 - 21198691
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    |||| |||| |||||||||||||||| ||||| ||||||||        ||| |||| |||||||||||||| |   | |||||||||||||||||||||    
T  21198797 ggtcctgcatacttgaacaaatattaacatatccaattgac-aatttttaatgccttattatcatcaaaactcataaagggtaatgttaaacacatttta 21198699  T
Q  268 ttccaaca 275  Q
    ||||||||    
T  21198698 ttccaaca 21198691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 16607903 - 16607952
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    |||||||||| |||| ||||||||||||||||||||||| ||| ||||||    
T  16607903 tttttgtctatggtcttgcacacttgaacaaatattagcgtatccaattg 16607952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 19749910 - 19749958
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttt 266  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  19749910 aataccttgttatcatcaaaactcaagg-tggtattgttaaacacatttt 19749958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 20551244 - 20551361
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| |  |||||||||||||||||||||||| ||||||| |       ||||||||||||| |||||||||     | ||||||||||    
T  20551244 tttttgtctatggtcctctacacttgaacaaatattagcatatgcaattga-caatttttaataccttgttatgatcaaaactctcaaagggtaatgtta 20551342  T
Q  257 aacacattttattccaaca 275  Q
    ||||||| || ||||||||    
T  20551343 aacacatcttgttccaaca 20551361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 42244080 - 42244195
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  ||||||   ||| |||||    
T  42244080 ttttgtctatagtcttgtacacttgaacaaatattagcatatccaattga-cagtttttaatactttgttatcatcaaaactcttaag---ggttatgtt 42244175  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  42244176 aaacacattttgttccaaca 42244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 6499623 - 6499655
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||||||||||||    
T  6499623 acacttgaacaaatattagcatattcaattgac 6499655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 9398505 - 9398465
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  9398505 ggtcttgcacacttgaacaaatattagcatatccaattgac 9398465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 21099451 - 21099411
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  21099451 ggtcatgcacacttcaacaaatattagcatatccaattgac 21099411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 26784723 - 26784839
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| |||| |  |||||||||||||||||||||||| ||||||| |       ||| |||||||||||||||||||     | | |||||||||    
T  26784723 ttttgtctatggtcctatacacttgaacaaatattagcatatccaattga-caatttttaattccttgttatcatcaaaactcttaaaggataatgttaa 26784821  T
Q  258 acacattttattccaaca 275  Q
    ||||||||| ||||||||    
T  26784822 acacattttgttccaaca 26784839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 25929932 - 25929881
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||| ||||| ||||||||    
T  25929932 tttttgtctatagtcatgtacacttgaacaaatattaacatatccaattgac 25929881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 28464100 - 28464049
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  28464100 tttttgtctatagtcttgtacacttgaacaaatattagcatatccaattgac 28464049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 5430302 - 5430360
Alignment:
Q  217 aataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||  |||||||  | |||||||||||||||||| ||||||||    
T  5430302 aataccttgttatcatcaaaactcttaagg--gttaatgttaaacacattttgttccaaca 5430360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 9089295 - 9089345
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||||||||  ||| || |||||||||||||||||||||||| |||||||    
T  9089295 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga 9089345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 33933685 - 33933735
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  33933685 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgac 33933735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 20568060 - 20568106
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttc 124  Q
    |||||| |||||||||||  ||||||| |||||||||||||||||||||    
T  20568060 gcaacacaagcttccttt--gtaaattacattgctctcatttgttcttc 20568106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 20575714 - 20575827
Alignment:
Q  93 tttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacat-ttaactttttgtctaaggtcatgcacacttgaacaaatat 191  Q
    ||||||||||  |||| |||| ||||||||| || |||  ||||||  ||| ||||| | |||| |||| ||||| | || |||||| ||||||||||||    
T  20575714 tttgtaaattctattgttctcttttgttctttcaaaaccaatactttgattcaagacttattaatttttagtctatgatcctgcacagttgaacaaatat 20575813  T
Q  192 tagcatattcaatt 205  Q
    |||||||| |||||    
T  20575814 tagcatatccaatt 20575827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 21072012 - 21071964
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    |||||||||| |||| || |||||||||||||||||| ||||| |||||    
T  21072012 tttttgtctatggtcttgtacacttgaacaaatattaacatatccaatt 21071964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 29138144 - 29138112
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  29138144 acacttgaacaaatattagcatatccaattgac 29138112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 35931747 - 35931715
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  35931747 acacttgaacaaatattagcatatccaattgac 35931715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 26833338 - 26833549
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||| || ||| |||||| |||| ||||||||||| |||  |||||||||||||||||||||||||| ||| ||||||||||||||| ||||  ||    
T  26833338 cttcagacgctttcttgcaacacaagcctcctttttgtagattctattgctctcatttgttcttccagaacctatgcttgaattaaagaca-ttaaagtt 26833436  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||| |       ||||| ||||||||||||||||| ||  | ||||||| |||||    
T  26833437 ttgtctatggtcctgcacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcaa--agggtaatgctaaac 26833533  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  26833534 acatttttttccaaca 26833549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 12194175 - 12194369
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaa-ttaaagacatttaactttttgtctaaggtcatg 174  Q
    |||||| |||||||||||  ||||||| |||||||||| ||||||| | |||||   ||||||||| |||| ||| | ||| |||||||||| |||||||    
T  12194175 gcaacacaagcttccttt--gtaaattccattgctctcttttgttcattcagaatcaatacttgaaattaatgacttgtaaatttttgtctatggtcatg 12194272  T
Q  175 cacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaac 274  Q
    |||||||||| |||||||||||||| |||| |||        ||||  |||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  12194273 cacacttgaaaaaatattagcatatccaatcgac---attttaatattttgttatcatcaaaacttaagg-tgacaatgttaaacacattttattccaac 12194368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 12438603 - 12438797
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaa-ttaaagacatttaactttttgtctaaggtcatg 174  Q
    |||||| |||||||||||  ||||||| |||||||||| ||||||| | |||||   ||||||||| |||| ||| | ||| |||||||||| |||||||    
T  12438603 gcaacacaagcttccttt--gtaaattccattgctctcttttgttcattcagaatcaatacttgaaattaatgacttgtaaatttttgtctatggtcatg 12438700  T
Q  175 cacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaac 274  Q
    |||||||||| |||||||||||||| |||| |||        ||||  |||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  12438701 cacacttgaaaaaatattagcatatccaatcgac---attttaatattttgttatcatcaaaacttaagg-tgacaatgttaaacacattttattccaac 12438796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 276
Target Start/End: Complemental strand, 17916667 - 17916486
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||        ||| ||||| | || ||||||||||| |||    
T  17916667 aagcttcctttt-gtaaatttcattgctctcatttgttctttcagaacatatacttgactta--------taattttttat-tatggtcatgcacatttg 17916578  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaacag 276  Q
    ||||||||||||||||| ||||||||        ||||| || |||| |||||||||||| | |||||||||||| || ||||| |||||||||    
T  17916577 aacaaatattagcatatgcaattgac--atttctaatacattattattatcaaaacttaaaggtggtaatgttaagcatattttgttccaacag 17916486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 19707815 - 19707937
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||||||||  ||| |||||| |||||||||||||||| ||| ||||||| || ||  |||| |||| |||||||||| |||| | ||||||||    
T  19707815 aagcttcctttttgttgattccattgccctcatttgttcttccataacctatactttaaata--gacacttaa-tttttgtctatggtcttacacacttg 19707911  T
Q  183 aacaaatattagcatattcaattgac 208  Q
    ||||||||||||||||| ||||||||    
T  19707912 aacaaatattagcatatccaattgac 19707937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 23192364 - 23192261
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    |||| ||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||| |||||||||||||| ||||||     
T  23192364 ggtcctgcacacttgaacaaatattagcatatccaattgac---tttttaataccttgttatcatcaaaacttaagg-tggtaatgttaaactcattttg 23192269  T
Q  268 ttccaaca 275  Q
    ||||||||    
T  23192268 ttccaaca 23192261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 126 - 275
Target Start/End: Complemental strand, 23352892 - 23352745
Alignment:
Q  126 agaacatatacttgaattaaagacatttaacttttt-gtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaatacctt 224  Q
    ||||| ||| |||||  ||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||||| |       ||||||||    
T  23352892 agaacttatgcttgatataaagacatttaaattttttgtctatggtcatgcatacttgaacaaatattagcatatccaattga-cattttttaatacctt 23352794  T
Q  225 gttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||| ||  | ||||||||||| |||||||| ||||||||    
T  23352793 gttatcatcaaaactcaa--agggtaatgttaagcacattttgttccaaca 23352745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 76 - 266
Target Start/End: Complemental strand, 1208537 - 1208353
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||||||||||||||||  |||||||||||||||||||| | |||||||| |||   ||| |   || ||||| | ||| |||| ||||| |||| |||    
T  1208537 gcaacataagcttccttt--gtaaatttcattgctctcatctattcttccaaaaccattacctttttttaagacttataaattttagtctatggtcctgc 1208440  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttt 266  Q
    ||||||||||||||||||||||||  |||  | |       |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1208439 acacttgaacaaatattagcatatctaatcaatcattt---aataccttgttatcatcaaaacttaagg-tggcaatgttaaacacatttt 1208353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 22461468 - 22461282
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| |||||||||| ||||||||| |||||| ||| ||| ||  | ||||| | || |||||||||| |||| ||||||||||    
T  22461468 aagcttccttcttgttgattccattgctctcttttgttcttacagaacctatgctttaa--agagacactaaa-tttttgtctatggtcctgcacacttg 22461372  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||||| |       ||||| ||||||||||||||||| ||  | ||||||||||||||||| || ||||||||    
T  22461371 aacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcaa--agggtaatgttaaacacatattgttccaaca 22461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 18772945 - 18773126
Alignment:
Q  87 ttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaaca 186  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||| | ||||| |   | ||||| | || ||||||| || |||| ||||||||||||||    
T  18772945 ttcctttttgtagattccattgctctcatttgttcttc-agaacttgtactttag--agagacactaaa-tttttgtatatggtcctgcacacttgaaca 18773040  T
Q  187 aatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||| ||||| | |       ||||||||||||||||||||||| ||  | |||||||||||| ||||||| ||||||||    
T  18773041 aatattagcatatccaatt-aacaatttttaataccttgttatcatcaaaactcaa--agggtaatgttaaatacattttgttccaaca 18773126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 19956119 - 19956004
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaa 257  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||| |||        |||||||| |||||||||||||| |||  | |||||||||||    
T  19956119 tttgtctatggtcctgcacacttgaacaaatattagcatatccaatcgacaattttttaataccttattatcatcaaaactctaa--agggtaatgttaa 19956022  T
Q  258 acacattttattccaaca 275  Q
    ||||||||||||||||||    
T  19956021 acacattttattccaaca 19956004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 22710962 - 22711076
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||| ||||| |||| || |||||||||||||||||||| ||| ||||||||        |||||||||||||||||||||||||||| ||| |||||||    
T  22710962 ttttagtctatggtcctggacacttgaacaaatattagcttatccaattgac---tttttaataccttgttatcatcaaaacttaagg-tggaaatgtta 22711057  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  22711058 aacacattttgttccaaca 22711076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 23772673 - 23772830
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||| |||||| ||| |||   ||||| |||  ||| |||||||||| | || |||    
T  23772673 gcaacacaagcttcctttttgtagattccattgctctcatttgttctt-cagaacctatgctt---ttaaacaca-ctaaatttttgtctatgctcctgc 23772767  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||||||||||||  |||| ||||| | |       |||||||||||||||||||||||    
T  23772768 acacttgaacaaatattaatatatccaatt-aacaatttttaataccttgttatcatcaaaact 23772830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 17525503 - 17525392
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||| ||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  17525503 tttttgtctatggtcatgtacacttgaacaaatattaacatatccaattga-caatttttaataccttgttatcatcaaaactctcaaaaggtaatgtta 17525405  T
Q  257 aacacattttatt 269  Q
    |||||||||||||    
T  17525404 aacacattttatt 17525392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 18719344 - 18719458
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       ||||| ||||||||||||||||| |   | ||||||||||    
T  18719344 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatacattgttatcatcaaaactca---aaggtaatgtta 18719439  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  18719440 aacacattttgttccaaca 18719458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 19156560 - 19156678
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||     | |||| |||||    
T  19156560 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgac--aattttaataccttgttatcatcaaaactctcaaagggtagtgtta 19156657  T
Q  257 aacacattttattccaacaga 277  Q
    |||||||||| ||||||||||    
T  19156658 aacacattttgttccaacaga 19156678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 17914837 - 17914954
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||| ||||| ||||||| |       |||||||||||||||||||||| | |  | ||||||||||    
T  17914837 tttttgtctatggtcttgtacacttgaacaaatattatcatatccaattga-caatttttaataccttgttatcatcaaaac-tcacaaaggtaatgtta 17914934  T
Q  257 aacacattttattccaacag 276  Q
    |||||||||| |||||||||    
T  17914935 aacacattttgttccaacag 17914954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 29693695 - 29693812
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | | ||||||||    
T  29693695 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaaggataatgtta 29693793  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  29693794 aacacattttgttccaaca 29693812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 36105606 - 36105723
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact--taaggatggtaatgt 254  Q
    ||||||||||  |||||| |||||||||||||||||||||||| |||||||         ||||| |||||||||||||||||  |||||||  ||| ||    
T  36105606 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattga-taatttttaatactttgttatcatcaaaactcctaaggat--taacgt 36105702  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||||||||||||    
T  36105703 taaacacattttattccaaca 36105723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 45538227 - 45538113
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  |||||||  | |||||||    
T  45538227 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcttaagg--gttaatgtt 45538131  T
Q  256 aaacacattttattccaa 273  Q
    ||||||||||| ||||||    
T  45538130 aaacacattttgttccaa 45538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 1238047 - 1238128
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  1238047 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 1238128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 3598101 - 3597985
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgtta 256  Q
    |||||||||  ||| || |||||||||||||||||||||||||||||||| |       ||||| ||||||||||||||||| | | || | ||||||||    
T  3598101 ttttgtctatagtcctgtacacttgaacaaatattagcatattcaattga-caatttttaatacattgttatcatcaaaactctgaaga-gttaatgtta 3598004  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  3598003 aacacattttgttccaaca 3597985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 16681079 - 16680962
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||| ||||||||||||| ||| |    | ||||||||||    
T  16681079 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatatcttgttatcatcagaaccttcaaagggtaatgtta 16680981  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  16680980 aacacattttgttccaaca 16680962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 20382169 - 20382052
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||| | ||||||| |       |||||||||||||||||||||||     | | ||||||||    
T  20382169 tttttgtctatggtcctgtacacttgaacaaatattagcatctccaattga-caatttttaataccttgttatcatcaaaactctcaaaggttaatgtta 20382071  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  20382070 aacacattttgttccaaca 20382052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 22745848 - 22745965
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||| |       |||||||| ||||||||||||||     | ||||||||||    
T  22745848 tttttgtctatcgtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttattatcatcaaaactctcaaagggtaatgtta 22745946  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  22745947 aacacattttgttccaaca 22745965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 17702104 - 17702212
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||||     | ||||||||||    
T  17702104 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatacattgttatcatcaaaactcttaaagggtaatgtta 17702202  T
Q  257 aacacatttt 266  Q
    ||||||||||    
T  17702203 aacacatttt 17702212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 18680177 - 18680257
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  18680177 ttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 18680257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 269
Target Start/End: Complemental strand, 19505317 - 19505135
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatata-cttgaatta-aagacatttaactttttgtctaaggtcat 173  Q
    |||||||||| ||||||| |  |||||||||||||||||||||||||||||||||  ||| ||||  ||| || | |||||       || ||| ||| |    
T  19505317 gcaacataagtttcctttct--aaatttcattgctctcatttgttcttccagaaccaatatcttgctttataaaaaattta-------gtgtaaagtcct 19505227  T
Q  174 gcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttatt 269  Q
    |||||||||||||||||||| |||||  |||||| |       |||||||||||||||||||||||||||| ||| ||| |||||||||| |||||    
T  19505226 gcacacttgaacaaatattaacatatcaaattgaac---ttttaataccttgttatcatcaaaacttaagg-tggcaatattaaacacatattatt 19505135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 33083168 - 33083293
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcattt-gttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacact 180  Q
    |||||||| |||||||  ||| ||| ||||||| || ||||||||| ||| ||||||| || ||  |||| | || |||||||| | |||| ||||||||    
T  33083168 taagcttcttttttgttgattccatagctctcaattcgttcttccaaaacctatactttaagta--gacactaaattttttgtccatggtcctgcacact 33083265  T
Q  181 tgaacaaatattagcatattcaattgac 208  Q
    ||||||||||||| ||||| ||||||||    
T  33083266 tgaacaaatattaacatatccaattgac 33083293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 17441596 - 17441545
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| ||||||| |||||| ||||||||||||||||| ||||||||    
T  17441596 tttttgtctatggtcatgtacacttcaacaaatattagcatatgcaattgac 17441545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 266
Target Start/End: Original strand, 17689654 - 17689809
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||| ||||||| |||||||||  ||||||   || ||||||| ||| |||| || || | || ||||||||||||||||||||| ||||| |||||    
T  17689654 ttgctctaatttgttgttccagaaccaatactttgttttaagacatataaattttagtatatgttcctgcacacttgaacaaatattaacatatccaatt 17689753  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttt 266  Q
    || |       |||||||||||||||| |||||||||  | |||| |||||||| ||||||    
T  17689754 gatc---ttttaataccttgttatcattaaaacttaa--aaggtattgttaaactcatttt 17689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 16189396 - 16189494
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||| ||||||| |       ||||||||| ||||||| ||||| |   | |||||||||||||||||||| ||||||||    
T  16189396 acacttgaacaaatattagcatatccaattga-caatttttaataccttgctatcatctaaactcacaaagggtaatgttaaacacattttgttccaaca 16189494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 17797801 - 17797851
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| ||| || |||||||||||||||||||||||| ||||||||    
T  17797801 ttttgtctaaagtcctgtacacttgaacaaatattagcatatccaattgac 17797851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 18120897 - 18120847
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||| |||| || |||||||||||||||||||||||| |||||||    
T  18120897 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga 18120847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 23263373 - 23263259
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| |||| || |||||||||||||||||||  ||| ||||||||        |||||||||||||||||||||||     | |||||||||||    
T  23263373 ttttgtctatggtcctgtacacttgaacaaatattag--tatccaattgac-aatttttaataccttgttatcatcaaaactcttaaagggtaatgttaa 23263277  T
Q  258 acacattttattccaaca 275  Q
    ||||||||| ||||||||    
T  23263276 acacattttgttccaaca 23263259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 24635677 - 24635809
Alignment:
Q  109 ctctcatttgttcttccagaacatatacttgaattaaagacatt-taactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||| ||||||| |||||||||  ||| || | || |||||||  ||| |||| ||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  24635677 ctctaatttgttattccagaaccaataatttattttaagacatactaaattttagtctatggtcctgcacacttgaccaaatattagtatattcaattga 24635776  T
Q  208 ccnnnnnnnaataccttgttatcatcaaaacttaag 243  Q
     |       ||||| |||||||||||||||||||||    
T  24635777 ac---ttttaatactttgttatcatcaaaacttaag 24635809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 43645225 - 43645282
Alignment:
Q  217 aataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||||| ||| |  |||||||||||||||||||| ||||||||    
T  43645225 aataccttgttatcatcaaaactctaaag--ggtaatgttaaacacattttgttccaaca 43645282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 2811198 - 2811237
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagca 196  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  2811198 tttttgtctatggtcatgtacacttgaacaaatattagca 2811237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 6408097 - 6408148
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  6408097 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgac 6408148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 18320964 - 18320913
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| |||| || ||||||||||||| |||||||||| ||||||||    
T  18320964 tttttgtctatggtcctgtacacttgaacaaagattagcatatccaattgac 18320913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 19927424 - 19927475
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||| ||| |  |||||||||||||||||||||||| ||||||||    
T  19927424 tttttgtctaaagtcctatacacttgaacaaatattagcatatccaattgac 19927475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 19943615 - 19943666
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| |||| || |||||| ||||||||||||||||| ||||||||    
T  19943615 tttttgtctatggtcttgtacacttaaacaaatattagcatatccaattgac 19943666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 29379969 - 29380048
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagc-atattcaattgaccnnnnnnnaataccttgttatcatcaaaac 238  Q
    |||||||| |||| || |||||||||||||||||||| |||||||||||| |       ||||||||||||||||||||||    
T  29379969 tttgtctatggtcctgtacacttgaacaaatattagcaatattcaattga-caatttttaataccttgttatcatcaaaac 29380048  T

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Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 40845143 - 40845092
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  40845143 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgac 40845092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 18685126 - 18685068
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||     | |||||||||||||||||||| ||||||||    
T  18685126 aataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 18685068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 18730691 - 18730633
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||     | |||||||||||||||||||| ||||||||    
T  18730691 aataccttgttatcatcaaaactcttaaagggtaatgttaaacacattttgttccaaca 18730633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 30421215 - 30421165
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||| |||| || ||||||||| |||||||||||||| ||||||||    
T  30421215 ttttgtctatggtcctgtacacttgaaaaaatattagcatatccaattgac 30421165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 13430388 - 13430319
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggat 246  Q
    ||||||||| |||||||||||||||||||||| |       ||||| ||||||||||||||||| ||||||    
T  13430388 acacttgaaaaaatattagcatattcaattga-caatttttaatactttgttatcatcaaaactcaaggat 13430319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 23783918 - 23783955
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagca 196  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  23783918 tttgtctatggtcatgtacacttgaacaaatattagca 23783955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 12541885 - 12542022
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||||||  ||  |||| ||||||||||||  |||||||   ||||||||||||||||||  |||||   |||||   |||||||| | ||| |||    
T  12541885 cttcagactctgacttacaacttaagcttccttt--gtaaattcatttgctctcatttgttcttttagaaccagtacttagtttaaagacttataaattt 12541982  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatat 199  Q
    | || || | || |||||| ||||||||||||||||||||    
T  12541983 tagtatatgatcctgcacagttgaacaaatattagcatat 12542022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 22663549 - 22663581
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||||||||||||||||||| |||||    
T  22663549 acacttgaacaaatattagcatattcagttgac 22663581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 22674196 - 22674228
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  22674196 acacttgaacaaatattagcatatccaattgac 22674228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 24832809 - 24832777
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  24832809 acacttgaacaaatattagcatatccaattgac 24832777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 8e-40; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 14304240 - 14304045
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||| ||||||||| |||  || ||||||||||||||||||||||| ||||||||  ||| ||||| |||| |||||||||| |||| |||    
T  14304240 gcaacacaagcttgctttttgtagattcaatagctctcatttgttcttccagaacctatacttggtttagagacacttaaatttttgtctatggtcctgc 14304141  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||| ||  | ||||||||||||| |||||| ||||||||    
T  14304140 acacttgaacaaatattatcatattcaattgac--atttttaataccttgttatcatcaaaactaaa--agggtaatgttaaactcattttgttccaaca 14304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 16412321 - 16412517
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||| ||||||||||| ||| ||||||||| ||||||||||||||||| ||| ||||| ||||||||| | || |||||||||| |||  |||    
T  16412321 gcaacacaagcatcctttttgtagattacattgctcttatttgttcttccagaacctatgcttgatttaaagacactcaattttttgtctatggttctgc 16412420  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||||||||||||||         |||||||| ||||||||||||||||||| ||  | ||| ||||||||||| ||||||||    
T  16412421 acacttgaacaaatattagcatattcaattga--tatttttaataccttattatcatcaaaacttaagg-tgacattgtcaaacacatttttttccaaca 16412517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 263
Target Start/End: Complemental strand, 9064051 - 9063854
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||| ||||| ||| ||||||||||||||  ||||||||||||||| |||||||||||||||| ||||||  |||||||| || ||||| | ||| |||    
T  9064051 cttcatactctgtcttgcaacataagcttc--ttttgtaaatttcatagctctcatttgttctttcagaaccaatacttgagtttaagacttataaattt 9063954  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    |||| || | || | |||| |||||||||||||| ||||| ||||||||        |||||||||||||||| ||||||||||| ||||||||||||||    
T  9063953 ttgtatatgatcctacacatttgaacaaatattatcatatccaattgac---attttaataccttgttatcattaaaacttaagg-tggtaatgttaaac 9063858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 16307586 - 16307397
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| |||||| |||||||||||  ||||||| |||||||||||||||||||||||||||  ||||||||        ||| ||| |||||| ||| |||    
T  16307586 atcttgcaacacaagcttccttt--gtaaattccattgctctcatttgttcttccagaaccaatacttga--------catataa-tttttgactatggt 16307498  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
    | |||||| |||||||||||||||||||| ||||| ||        |||||||||||||||||||||||||| | ||||||||||||||||||||| |||    
T  16307497 cctgcacatttgaacaaatattagcatatccaattaac---attgtaataccttgttatcatcaaaacttaa-gttggtaatgttaaacacattttgttc 16307402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 104 - 275
Target Start/End: Complemental strand, 18361470 - 18361302
Alignment:
Q  104 cattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaa 203  Q
    |||||||||| |||||||||  |||||  ||||||   || ||||| | ||| |||| ||||| |||| || |||||||||||||||||||||||| |||    
T  18361470 cattgctctcttttgttcttttagaaccaatactttgtttcaagacttataaattttagtctatggtcctgaacacttgaacaaatattagcatatccaa 18361371  T
Q  204 ttgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||        |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  18361370 ttgac--ttttttaataccttgttatcatcaaaacttaagg-tggcaatgttaaacacattttgttccaaca 18361302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 275
Target Start/End: Original strand, 5035667 - 5035805
Alignment:
Q  133 atacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcat 232  Q
    ||||||||||| ||||| | ||| |||| ||||| |||| |||||| |||||||||||||| ||||| ||||||||        ||||||||||||||||    
T  5035667 atacttgaatttaagacttataatttttagtctatggtcctgcacatttgaacaaatattaacatatccaattgac---attttaataccttgttatcat 5035763  T
Q  233 caaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||    
T  5035764 caaaacttaagg-tggtaatgttaaatacattttgttccaaca 5035805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 2913397 - 2913280
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  2913397 tttttgtctatggtcatgtacacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 2913299  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  2913298 aacacatttttttccaaca 2913280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 9069955 - 9070072
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||    || ||||||||||    
T  9069955 tttttgtctatggtcctgtacacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaactctcagagggtaatgtta 9070053  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  9070054 aacacattttgttccaaca 9070072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 7487725 - 7487539
Alignment:
Q  86 cttcctttttgtaaatttcattgctctca-tttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaa 184  Q
    ||||||||||||| |||  |||| ||| | |||| ||||||||||| ||| |||  || ||||||| |||| |||| ||||| |||| ||||||||||||    
T  7487725 cttcctttttgtagattcaattgatcttaatttgctcttccagaacctatgctttgataaaagacacttaaatttt-gtctatggtcctgcacacttgaa 7487627  T
Q  185 caaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||| |||| ||||||| |       ||||||||||||||||||||||| ||  | ||||||||||||| |||||| ||||||||    
T  7487626 caaatattagtatatccaattga-caatttttaataccttgttatcatcaaaactcaa--agggtaatgttaaactcattttgttccaaca 7487539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 9098086 - 9097899
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||| | ||||  ||| ||||||||||||||||||||||||||  ||  ||| ||  | ||||||| || |||||||||| |||| |||||| |||    
T  9098086 aagcttccatcttgttgattccattgctctcatttgttcttccagaatctaagcttcaa--agagacattaaa-tttttgtctatggtcctgcacagttg 9097990  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||||| |       ||||||||||||||||||||||| |||  | |||| ||||||||||||||| ||||||||    
T  9097989 aacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctaa--agggtagtgttaaacacattttgttccaaca 9097899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 18047689 - 18047575
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| |||||||||||||||||||||||| |  ||||||||        |||||||||||||||||||||||||||| ||  |||||||    
T  18047689 tttttgtctatggtcctgcacacttgaacaaatattagcaaaaccaattgac---attttaataccttgttatcatcaaaacttaagg-tgaaaatgtta 18047594  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  18047593 aacacattttgttccaaca 18047575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 5000630 - 5000511
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||| |||| |||| || |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||     ||||||||||||    
T  5000630 tttttttctatggtcctgtacacttgaacaaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaactctcaaatggtaatgtta 5000532  T
Q  257 aacacattttattccaacaga 277  Q
    |||||||||| ||||||||||    
T  5000531 aacacattttgttccaacaga 5000511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 10882949 - 10882833
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||     | ||||||||||    
T  10882949 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgac--aattttaataccttgttatcatcaaaactctcaaagggtaatgtta 10882852  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  10882851 aacacattttgttccaaca 10882833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 272
Target Start/End: Complemental strand, 12366526 - 12366414
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgtt 255  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||| |       ||||||||||||||||||||||| | ||   |||||||||    
T  12366526 tttttgtctatggtcctgtacacttgaacaaatattagcatattcaattga-caacttttaataccttgttatcatcaaaactctcag---ggtaatgtt 12366431  T
Q  256 aaacacattttattcca 272  Q
    ||||||||||| |||||    
T  12366430 aaacacattttgttcca 12366414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 13303203 - 13303319
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||        |||||||| |||||||||||||||    | ||||||||||    
T  13303203 tttttgtctatggtcttgtacacttgaacaaatattagcatatccaattgac--aattttaataccttattatcatcaaaactttcaaagggtaatgtta 13303300  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  13303301 aacacattttgttccaaca 13303319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 22577796 - 22577679
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||| |||| ||||||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  22577796 tttttttctatggtcatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcttaaagggtaatgtta 22577698  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  22577697 aacacattttgttccaaca 22577679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 44467432 - 44467549
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  ||||| ||  |||||||    
T  44467432 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcttaaaga--gtaatgt 44467528  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  44467529 taaacacattttgttccaaca 44467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 13880907 - 13881029
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| ||||||||||||||||||||||||||| | | ||| ||  | | ||   ||| ||||||| || |||| ||||||||||    
T  13880907 aagcttccttcttgttgattccattgctctcatttgttcttccagaacctttgctttaaggagacac---taaatttttgtatatggtcctgcacacttg 13881003  T
Q  183 aacaaatattagcatattcaattgac 208  Q
    ||||||||||||||||| ||||||||    
T  13881004 aacaaatattagcatatccaattgac 13881029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 4549970 - 4550072
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttttt-gtctaaggtcatgcacacttgaacaaatattagcatattcaat 204  Q
    |||||||| ||||||||| ||||||  ||||||   || ||||||| ||| ||||| ||||| |||||||||||||| ||||||||||||||||||| ||    
T  4549970 ttgctctcttttgttctttcagaaccaatactttgctttaagacatataaatttttagtctatggtcatgcacacttaaacaaatattagcatattcgat 4550069  T
Q  205 tga 207  Q
    |||    
T  4550070 tga 4550072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 12222291 - 12222202
Alignment:
Q  116 ttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    |||||||||||||||  ||||||   || ||||||| ||| |||| ||||| ||||||||||||||||||||||| |||||||| |||||    
T  12222291 ttgttcttccagaaccaatacttttttttaagacatataaattttagtctatggtcatgcacacttgaacaaatactagcatatccaatt 12222202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 13137700 - 13137583
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| ||||||||||||||||||| |||| |||| || |       |||||||||||||||||||||||     | ||||||||||    
T  13137700 tttttgtctatggtcatgtacacttgaacaaatattagtatatccaataga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 13137602  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  13137601 aacacattttgttccaaca 13137583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 13692722 - 13692839
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| |||||||         |||||||||||||||||||||||     | ||||||||||    
T  13692722 tttttgtctatggtcttgtacacttgaacaaatattagcatatccaattga-taatttttaataccttgttatcatcaaaactcttaaagggtaatgtta 13692820  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  13692821 aacacattttgttccaaca 13692839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 13730486 - 13730369
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||| |||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  13730486 tttttatctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcttaaagggtaatgtta 13730388  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  13730387 aacacattttgttccaaca 13730369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 28409416 - 28409533
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||  | |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  28409416 tttttgtctatggtccagtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcttaaagggtaatgtta 28409514  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  28409515 aacacattttgttccaaca 28409533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 30026273 - 30026390
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| |||||||         |||||||||||||||||||||||     | ||||||||||    
T  30026273 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-taatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 30026371  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  30026372 aacacattttgttccaaca 30026390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 16307291 - 16307196
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcc 271  Q
    ||||||||| ||||||||||||||||  ||||||| |       ||||| |||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  16307291 tgcacacttaaacaaatattagcatacccaattgagctttt---aatactttgttatcatcaaaacttaaaggtggtaatgttaaacacattttgttcc 16307196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 239
Target Start/End: Original strand, 9762979 - 9763109
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||| | |||| |||| |||||| ||||||   || ||||| | ||| |||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  9762979 ttgctctaaattgtacttctagaacaaatactttgttttaagacttataaattttagtctaaggtcctgcacacttgaacagatattagcatatccaatt 9763078  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    || |       |||||||||||||||||||||||    
T  9763079 gaac---ttttaataccttgttatcatcaaaact 9763109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 13880490 - 13880605
Alignment:
Q  161 tgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaaca 260  Q
    |||||| |||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||| |||||||||     | ||||||||||||||    
T  13880490 tgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttataatcaaaactctcaaagggtaatgttaaaca 13880588  T
Q  261 cattttattccaacaga 277  Q
    |||||| ||||||||||    
T  13880589 cattttgttccaacaga 13880605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 275
Target Start/End: Complemental strand, 16556583 - 16556465
Alignment:
Q  156 ctttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgt 254  Q
    |||||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||| | | || | ||||||    
T  16556583 ctttttgtctatagtcttgtacacttgaacaaatattagcatatccaattga-cagtttttaataccttgttatcatcaaaactctcaaga-gttaatgt 16556486  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  16556485 taaacacattttgttccaaca 16556465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 275
Target Start/End: Original strand, 16609079 - 16609197
Alignment:
Q  156 ctttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgt 254  Q
    |||||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||| | | || | ||||||    
T  16609079 ctttttgtctatagtcttgtacacttgaacaaatattagcatatccaattga-cagtttttaataccttgttatcatcaaaactctcaaga-gttaatgt 16609176  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||| ||||||||    
T  16609177 taaacacattttgttccaaca 16609197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 242
Target Start/End: Complemental strand, 1878090 - 1877957
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||||| |||||||| ||||||  ||||||   || ||||| | ||| ||||  |||| |||| ||||||||||||||||||||||||||| |||||    
T  1878090 ttgctctcaattgttctttcagaaccaatactttgttttaagacttataaattttactctatggtcctgcacacttgaacaaatattagcatatccaatt 1877991  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaacttaa 242  Q
    || |       ||||||| ||||||||||||||||||    
T  1877990 gaac---ttttaatacctagttatcatcaaaacttaa 1877957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 275
Target Start/End: Complemental strand, 13172254 - 13172064
Alignment:
Q  67 ctctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtcta 166  Q
    |||| ||| |||||| ||||||||||||||| || |  |||||||||||||||||||||||||| ||  |||||  |||| ||||||||               
T  13172254 ctctttcttgcaacacaagcttcctttttgttaactctattgctctcatttgttcttccagaacctaagcttgatataaacacatttaa----------- 13172166  T
Q  167 aggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttt 266  Q
         || ||||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||| || | ||||| ||| |||||||||||    
T  13172165 -----atccacacttgaacaaatattagcatatccaattga-cattttttaataccttgttatcatcaaaactcaaag-tggtattgtcaaacacatttt 13172073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 2500407 - 2500524
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||| ||||||||||||||||     | ||||||||||    
T  2500407 tttttgtctatggtcttgtacacttgaacaaatattagcatatccaattga-caatttttaataccatgttatcatcaaaactcttaaagggtaatgtta 2500505  T
Q  257 aacacattttattccaaca 275  Q
    || ||||||| ||||||||    
T  2500506 aatacattttgttccaaca 2500524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 11319787 - 11319903
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||        ||||| |||||||||||||||||     | ||||||||||    
T  11319787 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattgac--aatattaatactttgttatcatcaaaactctcaaagggtaatgtta 11319884  T
Q  257 aacacattttattccaaca 275  Q
    |||| ||||| ||||||||    
T  11319885 aacatattttgttccaaca 11319903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 13649081 - 13649198
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || ||||||||||||||||||||||||| |||||| |        ||||||| ||||||||||||||     | ||||||||||    
T  13649081 tttttgtctatggtcctgtacacttgaacaaatattagcatattgaattga-caattttttataccttattatcatcaaaactcttaaagggtaatgtta 13649179  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  13649180 aacacattttgttccaaca 13649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 15088871 - 15088988
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| | ||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||     | ||||||||||    
T  15088871 tttttgtctatggtcctccacacttgaacaaatattagcatatccaattga-aaatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 15088969  T
Q  257 aacacattttattccaaca 275  Q
    || ||||||| ||||||||    
T  15088970 aaaacattttgttccaaca 15088988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 15304943 - 15305015
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaag 243  Q
    |||||||||||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||| ||||    
T  15304943 ggtcatgcacacttgaacaaatattagcatatccaattgaac---ttttaataccttgttatcatcaaaacataag 15305015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 16316352 - 16316271
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| ||||||| ||||||||||||||||||||||||  |||||| |       |||||||||||||||||||||||    
T  16316352 tttttgtctatggtcatgtacacttgaacaaatattagcatatctaattga-caacttttaataccttgttatcatcaaaact 16316271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 23279816 - 23279699
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       || |||||||||| |||||||||     | ||||||||||    
T  23279816 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaacaccttgttattatcaaaactctcaaagggtaatgtta 23279718  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  23279717 aacacattttgttccaaca 23279699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 9396696 - 9396648
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  9396696 ttttagtctatggtcatgcacacttgaacaaatattagcatatccaatt 9396648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 9709609 - 9709529
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  9709609 ttttgtctatggttatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 9709529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 11319721 - 11319769
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  11319721 taagcttcctttttgttgatttcattgctctcttttgttcttccagaac 11319769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 33606069 - 33606185
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  |||||| |||||||||||||||||||||||| ||||||| |       |||||||| ||||||||||||  || ||||  | |||||||    
T  33606069 ttttgtctatagtcatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttcttatcatcaaaactctcaagg--gttaatgtt 33606165  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  33606166 aaacacattttgttccaaca 33606185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 48800482 - 48800366
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||||| ||         |||||| ||  || |||||||||| ||||||| |||||||    
T  48800482 aagcttcctttttgttgattccattgctctcttttgttcttccagaacctaa--------taaagatatcaaa-tttttgtctatggtcatgtacacttg 48800392  T
Q  183 aacaaatattagcatattcaattgac 208  Q
    ||||||||||||||||| || |||||    
T  48800391 aacaaatattagcatatccatttgac 48800366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 2265307 - 2265256
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||| ||  ||||||||||||||||||||||||||| ||||||||    
T  2265307 tttttgtctaaagttctgcacacttgaacaaatattagcatatccaattgac 2265256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 13031863 - 13031812
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| ||| ||| |||||||||||||||||||||||| ||||||||    
T  13031863 tttttgtctatggttatgtacacttgaacaaatattagcatatccaattgac 13031812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 27872079 - 27872130
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  27872079 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattgac 27872130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 12174081 - 12173983
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  |||||||  | ||| |||||||||||||| ||||||    
T  12174081 acacttgaacaaatattagcatatccaattga-ctatttttaataccttgttatcatcaaaactcttaagg--gttaacgttaaacacattttgttccaa 12173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 19417524 - 19417615
Alignment:
Q  113 catttgttcttccagaacatatacttgaattaaagacatt-taactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    |||||||||||||| |||  |||| ||| |  |||||||| ||| |||||||||| |||| |||||||||||| |||||||||||||| |||||    
T  19417524 catttgttcttccataaccaatacatgatt--aagacattgtaaatttttgtctatggtcctgcacacttgaataaatattagcatatccaatt 19417615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 48062603 - 48062553
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||  |||||| |||||||||||||||||| ||||||||||||||    
T  48062603 ttttgtctatagtcatgtacacttgaacaaatattaacatattcaattgac 48062553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 14426896 - 14427012
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgtta 256  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||| | | || | ||||||||    
T  14426896 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaga-gttaatgtta 14426993  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||  ||||||||    
T  14426994 aacacatttcgttccaaca 14427012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 276
Target Start/End: Complemental strand, 30944133 - 30944016
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||  || ||||  | |||| ||    
T  30944133 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaagg--gttaatttt 30944037  T
Q  256 aaacacattttattccaacag 276  Q
    ||||||||||| |||||||||    
T  30944036 aaacacattttgttccaacag 30944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 33691502 - 33691421
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| |||| || |||||||||||||||||| ||||| ||||||| |       |||||||||||||||||||||||    
T  33691502 tttttgtctatggtcctgtacacttgaacaaatattaacatatccaattga-caatttttaataccttgttatcatcaaaact 33691421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 273
Target Start/End: Original strand, 4494790 - 4494970
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||||||||  |||||||||||||| || ||||||||||||| |        ||| ||||   | || |||||||||| |||| |  |||||||    
T  4494790 aagcttcctttttgttgatttcattgctctctttcgttcttccagaacct--------atttaaga-tgtcaaatttttgtctatggtcctatacacttg 4494880  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaa 273  Q
    ||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | |||||| ||||||||||||| ||||||    
T  4494881 aacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatattaaacacattttgttccaa 4494970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 11086780 - 11086700
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagc-atattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||| |||| || |||||||||||||||||||| |||||||||||| |       |||||||||||||||||||||||    
T  11086780 tttgtctatggtcctgtacacttgaacaaatattagcaatattcaattga-caaattttaataccttgttatcatcaaaact 11086700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 13018300 - 13018220
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaac 238  Q
    |||||||||| ||||||| |||||||||| |||||||||||||  |||||| |       ||||||||||||||||||||||    
T  13018300 tttttgtctatggtcatgtacacttgaaccaatattagcatatcaaattga-caatttttaataccttgttatcatcaaaac 13018220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 24794512 - 24794464
Alignment:
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||  |||||| ||||||||||||||||||||||||| |||||||    
T  24794512 ttgtctatagtcatgtacacttgaacaaatattagcatatttaattgac 24794464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 29935154 - 29935102
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaac-aaatattagcatattcaattgac 208  Q
    |||||||||| ||||||| |||||||||| |||||||||||||| ||||||||    
T  29935154 tttttgtctatggtcatgtacacttgaacaaaatattagcatatccaattgac 29935102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 9065810 - 9065873
Alignment:
Q  145 aagacatt-taactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||||||  |||| |||||||    
T  9065810 aagacattataaatttttgtctatggtcctgcacacttgaacaaatattaatatatccaattga 9065873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 16111640 - 16111541
Alignment:
Q  176 acacttgaa-caaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacattttattcca 272  Q
    ||||||||| ||||||||||||||| ||||||||        |||||||||||||||||||||  ||||||| |  |||||||||||||||||| |||||    
T  16111640 acacttgaatcaaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaattcttaagggt--taatgttaaacacattttgttcca 16111544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 48236710 - 48236605
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||||        ||||||||||||||| |||||  |||||||  | |||||||    
T  48236710 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgac---aatttaataccttgttatcagcaaaactcttaagg--gttaatgtt 48236616  T
Q  256 aaacacatttt 266  Q
    |||||||||||    
T  48236615 aaacacatttt 48236605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 8183349 - 8183412
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||||||||||||||||| ||||||||        ||||| |||||||||||||||||    
T  8183349 acacttgaacaaatattagcatatccaattgacaattttttaatactttgttatcatcaaaact 8183412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 15701047 - 15700949
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  |||||||  | ||| |||||||||||||| ||||||    
T  15701047 acacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaagg--gttaacgttaaacacattttgttccaa 15700951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 16422890 - 16422940
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||| ||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  16422890 ttttagtctatggtcttgcatacttgaacaaatactagcatattcaattga 16422940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 16813270 - 16813304
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||| |||||||||||||||||||||||||||||    
T  16813270 tgcactcttgaacaaatattagcatattcaattga 16813304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 23390746 - 23390688
Alignment:
Q  217 aataccttgttatcatcaaaact--taaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||  ||||| |  |||||||||||||||||| ||||||||    
T  23390746 aataccttgttatcatcaaaactcttaagggt--taatgttaaacacattttgttccaaca 23390688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 32264498 - 32264448
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  32264498 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgac 32264448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 2913463 - 2913415
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  ||| | |||||||| ||||||||||||||||    
T  2913463 taagcttcctttttgttgattcctttgctctcttttgttcttccagaac 2913415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 7185342 - 7185306
Alignment:
Q  170 tcatgcacacttgaacaaatattagcatattcaattg 206  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  7185342 tcatgtacacttgaacaaatattagcatatccaattg 7185306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 11016324 - 11016384
Alignment:
Q  145 aagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||| ||| |||| ||||| |||| ||||| ||| ||||||||||||||||| |||||    
T  11016324 aagacatataaattttagtctatggtcctgcacgcttaaacaaatattagcatatccaatt 11016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 13880420 - 13880468
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  ||| | |||||||| ||||||||||||||||    
T  13880420 taagcttcctttttgttgattcctttgctctcttttgttcttccagaac 13880468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 4708 - 4919
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||| || ||| |||||||| ||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||    
T  4708 cttcagacgctttcttgcaacatatgcttcctttttgtattttccattgctctcatttgttcttccagaacctatacttgaattaaagacgttaaac-tt 4806  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||| |  ||| |||||||||||||||||||||||||||  |||||| |       ||||||||||||| || |||||| ||  | |||||||||||||    
T  4807 ttgtcaatagtcctgcacacttgaacaaatattagcatatctaattga-caatttttaataccttgttattattaaaactcaa--agggtaatgttaaac 4903  T
Q  260 acattttattccaaca 275  Q
    |||||||  |||||||    
T  4904 acattttgctccaaca 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 5793 - 5850
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  5793 aatatcttgttatcatcaaaacttaagg-tgacaatgttaaacacattttattccaaca 5850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 1033 - 1229
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||| ||||||||||| ||| ||||||||| ||||||||||||||||| ||| ||||| ||||||||| | || |||||||||| |||  |||    
T  1033 gcaacacaagcatcctttttgtagattacattgctcttatttgttcttccagaacctatgcttgatttaaagacactcaattttttgtctatggttctgc 1132  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||||||||||||||         |||||||| ||||||||||||||||||| ||  | ||| ||||||||||| ||||||||    
T  1133 acacttgaacaaatattagcatattcaattga--tatttttaataccttattatcatcaaaacttaagg-tgacattgtcaaacacatttttttccaaca 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 11602 - 11652
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||| ||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  11602 ttttagtctatggtcttgcatacttgaacaaatactagcatattcaattga 11652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 10250136 - 10250325
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||  || ||| | ||||||||| | || ||||||| || |||| ||||||||||    
T  10250136 aagcttcctttttttaaattccattgctctcatttgttcttctagaacccatgcttcatttaaagacactcaaatttttgtatatggtcctgcacacttg 10250235  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||| ||||| |||||||         ||||||||||||||||||||||||||  | |||||||||||||||||||| ||||||||    
T  10250236 aacaaatattatcatatccaattga-atttttttaataccttgttatcatcaaaacttaa--agggtaatgttaaacacattttgttccaaca 10250325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 99 - 275
Target Start/End: Complemental strand, 19888924 - 19888751
Alignment:
Q  99 aatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcata 198  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||||||| |  ||  | ||||||| |||| ||||||||||||||||||||||||||    
T  19888924 aatttcattgctctcatttgttctttcagaactaatacttgaattaaagacttaaaaaatattgtctatggtcctgcacacttgaacaaatattagcata 19888825  T
Q  199 ttcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    | ||||||||        |||||||| ||||||||||||| || || ||||||||||||||||||||| ||||||||    
T  19888824 tccaattgac--atttttaatacctttttatcatcaaaacgtatgg-tggtaatgttaaacacattttgttccaaca 19888751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 99 - 265
Target Start/End: Complemental strand, 16324306 - 16324143
Alignment:
Q  99 aatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcata 198  Q
    ||||||||||||||||||||||||| || |||  ||| ||||||||||||| | |||||||||||||| | || ||||||||||||||||||||||||||    
T  16324306 aatttcattgctctcatttgttctttcaaaaccaatatttgaattaaagacttataactttttgtctatgatcctgcacacttgaacaaatattagcata 16324207  T
Q  199 ttcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattt 265  Q
    | ||||||||        |||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  16324206 tccaattgac--atttttaatacctttttatcatcaaaacttaagg-tcgtaaagttaaacacattt 16324143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 11901530 - 11901717
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||| ||| ||| |||| |||||||| ||  |||||| || |||| |||| |||||    
T  11901530 aagcttcctttttgttaattccattgttctcatttgttcttccagaacctatgctt-aatt-aagacattcaaaattttgtttatggtcctgcagacttg 11901627  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||||| |       ||||||||||||||||||||||| ||  | |||||||||||||||||||| ||||||||    
T  11901628 aacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcaa--agggtaatgttaaacacattttgttccaaca 11901717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 12417412 - 12417223
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaa--ttaaagacatttaactttttgtctaaggtcatgcacact 180  Q
    |||||||| ||||||||||  |||| |||| ||||||||||||||||| ||| |||||   ||||||||||| || |||||||||  |||| ||||||||    
T  12417412 aagcttccattttgtaaataccattcctctaatttgttcttccagaacctatgcttgatatttaaagacattaaa-tttttgtctttggtcctgcacact 12417314  T
Q  181 tgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||| ||||||||        ||||||||||||||||||||||| ||  | |||||||||||||||||||| ||||||||    
T  12417313 tgaacaaatattagcatatccaattgac--atttttaataccttgttatcatcaaaactcaa--agggtaatgttaaacacattttgttccaaca 12417223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 14902313 - 14902168
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||| ||||| ||| ||||||||| |||||||||   |||||||||||||||| ||| ||||| ||||||  ||||||||||| ||||| | ||| |||    
T  14902313 cttcaaactctgtcttgcaacataaccttccttttc--aaatttcattgctctcttttattctttcagaaccaatacttgaatttaagacttataaattt 14902216  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||    
T  14902215 ttgtctatggtcctgcacacttgaacaaatattagcatatccaattga 14902168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 21350429 - 21350231
Alignment:
Q  71 atctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggt 170  Q
    |||| |||||| |||||||||||  | |||||||||||||||| |||||| || || |||  | |||||||||||| ||   ||| |||| ||||| |||    
T  21350429 atcttgcaacaaaagcttccttt--gcaaatttcattgctctcgtttgttttttcataaccaaaacttgaattaaacactaataaattttagtctatggt 21350332  T
Q  171 catgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattc 270  Q
    ||||||||||||||||||||| || |||| ||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||||| ||     
T  21350331 catgcacacttgaacaaatatcagaatatccaattgac---attttaataccttgttatcatcaaaacttaagg-tggtaatgttaaacacattttgttt 21350236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 2652041 - 2652234
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||||||||||||||||  |  |||| ||||||| || |||||| |||||||||  ||||||||||| ||||| |  || |||||||||| |||| |||    
T  2652041 gcaacataagcttccttt--gctaattccattgctttcttttgttattccagaaccaatacttgaatttaagacttacaaatttttgtctatggtcgtgc 2652138  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||| |||| || || ||||||||||||||| ||| ||||    
T  2652139 acacttgaacaaatattagcatatccaattgac---tttttaataccttgttatcatcaaaactaaagg-tgatagtgttaaacacattttgttcaaaca 2652234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 14356891 - 14356777
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||| |||| |||| | ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||||||||||    
T  14356891 tttttttctatggtcctacacacttgaacaaatattagcatattcaattgac---attttaataccttgttatcatcaaaacttaagg-tggtaatgtta 14356796  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  14356795 aacacattttgttccaaca 14356777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 17540733 - 17540919
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| ||||||||||||||||||||||||||| ||| ||||||  | |||||  ||| |||||||||| |||| ||||||||||    
T  17540733 aagcttccttcttgttgattccattgctctcatttgttcttccagaacctatgcttgaa--agagaca-ctaaatttttgtctacggtcctgcacacttg 17540829  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||| ||||||||  |||||| |       |||||||||||| |||||||||| ||  | |||||||||||||||||||| ||||||||    
T  17540830 aacaaataatagcatatctaattga-caacttttaataccttgttaacatcaaaactcaa--agggtaatgttaaacacattttgttccaaca 17540919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 17787834 - 17787648
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||||||||||||||||||||||||| ||||||| | ||| ||  | ||||| | || |||||||  | |||| ||||||||||    
T  17787834 aagcttccttcttgttgatttcattgctctcatttgttcttc-agaacatgtgctttaa--agagacactaaattttttgtgcatggtcctgcacacttg 17787738  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||| |||||||||||||||||||||        ||||||||||||||||||||||| || |  |||||||||||||||||||| ||||||||    
T  17787737 aacagatattagcatattcaattgac-aattttcaataccttgttatcatcaaaactcaaag--ggtaatgttaaacacattttgttccaaca 17787648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 6641995 - 6642117
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  | | ||||||||||||||||||||||||||| ||||||| || ||  |||||| || ||||||| || ||||||| |||||||    
T  6641995 aagcttccttcttgttgactccattgctctcatttgttcttccagaacctatactttaaata--gacattaaa-tttttgtatatggtcatgtacacttg 6642091  T
Q  183 aacaaatattagcatattcaattgac 208  Q
    ||||||||||||||||| ||||||||    
T  6642092 aacaaatattagcatatccaattgac 6642117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 20577533 - 20577726
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||||||||||||||||  |||||||  |||||| |||||| ||||| ||||||  ||||||   || ||||| | ||   | | ||||| |||| |||    
T  20577533 gcaacataagcttccttt--gtaaattatattgctttcatttattctttcagaaccaatactttgttttaagacctatataatgtagtctatggtcctgc 20577630  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
     ||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||    
T  20577631 gcacttgaacaaatattagcatatccaattga---aattttaataccttgttatcatcaaaacttaagg-tgaaaatgttaaacacattttgttccaaca 20577726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 45833775 - 45833887
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||||        ||||||||||||| |||||||||     | ||||||||||    
T  45833775 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaattgacaatttttgaataccttgttatgatcaaaactctcaaagggtaatgtta 45833874  T
Q  257 aacacattttatt 269  Q
    |||||||||||||    
T  45833875 aacacattttatt 45833887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 272
Target Start/End: Original strand, 11916035 - 11916218
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  |||||||||||||||||| ||||| |||||| ||| ||| ||  | ||||| | || |||||||||| | || |||||||||     
T  11916035 aagcttccttcttgttgatttcattgctctcattttttctttcagaacctatgctttaa--agagacactaaa-tttttgtctatgatcttgcacactta 11916131  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcca 272  Q
    ||||||||||||||||| ||||||| |       |||| ||||||||||||||||| |||  | |||| ||||||||||||||| |||||    
T  11916132 aacaaatattagcatatccaattga-caatttttaatatcttgttatcatcaaaacctaa--agggtagtgttaaacacattttgttcca 11916218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 17812178 - 17812014
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||||| ||| |||||||||||  |||| |   || ||||| | ||| |||| ||||| |||| |||||| ||||||||| |||||||||| |||||    
T  17812178 ttgctctcaattgctcttccagaaccaatacattgttttaagacttataaattttagtctatggtcttgcacatttgaacaaacattagcatatccaatt 17812079  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    || |       |||||||||||||||||||||||||||  ||  ||||||||||||||||| ||||||||    
T  17812078 gaactttt---aataccttgttatcatcaaaacttaag--tgacaatgttaaacacattttgttccaaca 17812014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 14833772 - 14833874
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||  |  | ||||||||||    
T  14833772 tttttgtctatagtcatgtacacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaactctaaaaaggtaatgtta 14833870  T
Q  257 aaca 260  Q
    ||||    
T  14833871 aaca 14833874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 276
Target Start/End: Complemental strand, 37435253 - 37435135
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||| |||||||||     | ||||||||||    
T  37435253 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttataatcaaaactctgaaagggtaatgtta 37435155  T
Q  257 aacacattttattccaacag 276  Q
    |||||||||| |||||||||    
T  37435154 aacacattttgttccaacag 37435135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 40846464 - 40846582
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaac-aaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtt 255  Q
    |||||||||| ||||||| |||||||||| |||||||||||||| ||||||| |       |||||||||||||||||||||| |    | |||||||||    
T  40846464 tttttgtctatggtcatgtacacttgaacaaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaacattcaaagggtaatgtt 40846562  T
Q  256 aaacacattttattccaaca 275  Q
    ||||||||||| ||||||||    
T  40846563 aaacacattttgttccaaca 40846582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 54680292 - 54680393
Alignment:
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattcc 271  Q
    ||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||||||| | | || | |||||||||||||||||| ||||    
T  54680292 tgcacacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaactctcaaga-gttaatgttaaacacattttgttcc 54680389  T
Q  272 aaca 275  Q
    ||||    
T  54680390 aaca 54680393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 19620824 - 19620707
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||| |||||||||     | ||||||||||    
T  19620824 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttattatcaaaactctcaaagggtaatgtta 19620726  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  19620725 aacacattttgttccaaca 19620707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 55732174 - 55732291
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    |||||||||  |||||| |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  |||||||  | |||||||    
T  55732174 ttttgtctatagtcatgtacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaagg--gttaatgtt 55732270  T
Q  256 aaacacattttattccaacag 276  Q
    ||||||||||| |||||||||    
T  55732271 aaacacattttgttccaacag 55732291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 3498013 - 3498129
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | |||||||||||    
T  3498013 ttttgtctatggtcttgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaa 3498111  T
Q  258 acacattttattccaaca 275  Q
    ||| ||||| ||||||||    
T  3498112 acatattttgttccaaca 3498129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 10660910 - 10660797
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaa 258  Q
    |||||||| |||| ||||||||||| ||||||||||||||| ||||||| |       |||||||||||||||  |||||| ||  | ||||||||||||    
T  10660910 tttgtctatggtcctgcacacttgagcaaatattagcatatccaattga-caatttttaataccttgttatcactaaaactcaa--agggtaatgttaaa 10660814  T
Q  259 cacattttattccaaca 275  Q
    |||||||| ||||||||    
T  10660813 cacattttgttccaaca 10660797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 10875055 - 10874942
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaa 258  Q
    |||||||| |||| ||||||||||| ||||||||||||||| ||||||| |       |||||||||||||||  |||||| ||  | ||||||||||||    
T  10875055 tttgtctatggtcctgcacacttgagcaaatattagcatatccaattga-caatttttaataccttgttatcactaaaactcaa--agggtaatgttaaa 10874959  T
Q  259 cacattttattccaaca 275  Q
    |||||||| ||||||||    
T  10874958 cacattttgttccaaca 10874942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 29121772 - 29121870
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgttaaacacattttattccaa 273  Q
    |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||  |||||||  | |||||||||||||||||| ||||||    
T  29121772 acacttgaacaaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaactcttaagg--gttaatgttaaacacattttgttccaa 29121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 9141242 - 9141359
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgtt 255  Q
    ||||||||| |||  || ||||||||| |||||||||||||| ||||||||        |||||||||||||||||||||  ||||| ||  ||||||||    
T  9141242 ttttgtctatggtgctgtacacttgaataaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaagtcttaaaga--gtaatgtt 9141338  T
Q  256 aaacacattttattccaacag 276  Q
    ||||||||||| |||||||||    
T  9141339 aaacacattttgttccaacag 9141359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 17398409 - 17398292
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaagga-tggtaatgtta 256  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||| ||||||||||||||||||||||| |  || || ||    
T  17398409 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaacttaaggattaatattgcta 17398311  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  17398310 aacacattttgttccaaca 17398292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 23087964 - 23088057
Alignment:
Q  114 atttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||| |||||||||||  ||||||   || ||||||| ||| |||| || || |||| ||||||||||||||||||||| |||||||||||||    
T  23087964 atttgctcttccagaaccaatactttgttttaagacatataaattttagtatatggtcctgcacacttgaacaaatattaacatattcaattga 23088057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 13575876 - 13575796
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  13575876 ttttgtctatggttatgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 13575796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 10693252 - 10693350
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaac 274  Q
    |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||| | | || | |||||||||||||||||| |||||||    
T  10693252 acacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaga-gttaatgttaaacacattttgttccaac 10693349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 10907018 - 10907116
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaac 274  Q
    |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||| | | || | |||||||||||||||||| |||||||    
T  10907018 acacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaga-gttaatgttaaacacattttgttccaac 10907115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 14904051 - 14904000
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| ||||||| | |||||||||||||||||||||| ||||||||    
T  14904051 tttttgtctatggtcatgtatacttgaacaaatattagcatatccaattgac 14904000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 22089925 - 22090032
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    ||||||||||||||||| ||||| |||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||||||||||||     
T  22089925 ggtcatgcacacttgaaaaaataatagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttg 22090023  T
Q  268 ttccaacag 276  Q
    ||| |||||    
T  22090024 ttctaacag 22090032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 56034938 - 56034985
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaat 204  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  56034938 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaat 56034985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 3396002 - 3396056
Alignment:
Q  154 aactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||||| |||| || |||||||||||||||||| ||||| ||||||||    
T  3396002 aactttttgtctatggtcctgtacacttgaacaaatattaacatatccaattgac 3396056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 19809985 - 19809935
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||| | || |||||||||||||||||||||| ||||||||||||    
T  19809985 tttttgtctatgatcctgcacacttgaacaaatattagtatattcaattga 19809935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 19818977 - 19818927
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||| | || ||||||||||||||||||||||||||| |||||||    
T  19818977 tttttgtctatgatcctgcacacttgaacaaatattagcatatccaattga 19818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 19911671 - 19911621
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||| ||| ||||||| |||||||||||||||||||||||| ||||||||    
T  19911671 ttttgcctatggtcatgtacacttgaacaaatattagcatatccaattgac 19911621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 25650871 - 25650760
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    ||||||||||  |||||| |||||||||||||||||| ||||| ||||||||        ||||| |||||||||||||||  |||||||  | ||| ||    
T  25650871 tttttgtctatagtcatgtacacttgaacaaatattaacatatccaattgacatttttttaatactttgttatcatcaaaactcttaagg--gttaacgt 25650774  T
Q  255 taaacacattttat 268  Q
    ||||||||||||||    
T  25650773 taaacacattttat 25650760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 41114550 - 41114363
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| | ||  ||| ||||||||||||||||||||| ||||| ||  ||| ||  | ||||| | ||  ||||||||| |||| |||||||||     
T  41114550 aagcttccttctcgttgattccattgctctcatttgttcttcgagaacctaagctttaaaaagagacactaaa--ttttgtctatggtcctgcacactta 41114453  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||| ||||| |||||| |||||        ||||| ||||||||||||||||| ||| |  |||||||||||||||||||| ||||||||    
T  41114452 aacaaat-ttagcgtattcatttgac-aatttttaatacattgttatcatcaaaactctaaag--ggtaatgttaaacacattttgttccaaca 41114363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 14604639 - 14604558
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| ||||||| |||| | ||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  14604639 tttttgtctatggtcatgtacacctaaacaaatattagcatatccaattga-caattcttaataccttgttatcatcaaaact 14604558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 14867267 - 14867219
Alignment:
Q  226 ttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  14867267 ttatcatcaaaacttatgg-tggtaatgttaaacacattttgttccaaca 14867219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 15139618 - 15139688
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaac 238  Q
    |||| ||||||||||||||||||||||||||| ||||||||        |||||| |||||||||||||||    
T  15139618 ggtcctgcacacttgaacaaatattagcatatccaattgacaattttttaataccatgttatcatcaaaac 15139688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 18776265 - 18776467
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||||||||| ||| |||||||||||||||  |||||| ||| | |||||||| ||||||||  ||||||| ||| |||| |||       |  | |||    
T  18776265 cttcagactctgtcttgcaacataagcttcc--tttgtagattactttgctctcttttgttctatcagaacaaatatttgactta-------tatatttt 18776355  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| |||| |||||||||||||||| ||||| |  | ||||||||        |||||||||||| ||||||||| ||||| |  |||||||||||    
T  18776356 ttgtctatggtcctgcacacttgaacaaacattagtaattccaattgac---attttaataccttgttaacatcaaaacataagg-taataatgttaaac 18776451  T
Q  260 acattttattccaaca 275  Q
    ||||| | ||||||||    
T  18776452 acattgtgttccaaca 18776467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 29680290 - 29680241
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||||||| |||| || |||||||||||||||||||||||| |||||||    
T  29680290 ttttgtctatggtcttgtacacttgaacaaatattagcatatccaattga 29680241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 3793470 - 3793550
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  3793470 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 3793550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 3105182 - 3105131
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  3105182 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgac 3105131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 12810926 - 12810875
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| |||| || |||||||||||| ||||||||||| ||||||||    
T  12810926 tttttgtctatggtcctgtacacttgaacaattattagcatatccaattgac 12810875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 12810991 - 12810944
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  12810991 aagcttcctttttgttgattccattgctctcttttgttcttccagaac 12810944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 14571408 - 14571459
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||| ||| ||||||||    
T  14571408 tttttgtctatagtcatgtacacttgaacaaatattagcgtatccaattgac 14571459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 24619908 - 24619970
Alignment:
Q  145 aagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||||||| ||| ||||||| || |||  |||||||||||||||||||||| |||| |||||||    
T  24619908 aagacatataaatttttgtttatggttttgcacacttgaacaaatattagtatatccaattga 24619970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 38514255 - 38514305
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||  |||||| |||||||||||||||||||| ||| ||||||||    
T  38514255 ttttgtctatagtcatgtacacttgaacaaatattagcgtatccaattgac 38514305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 1672812 - 1672844
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  1672812 acacttgaacaaatattagcatatccaattgac 1672844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 1675287 - 1675319
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  1675287 acacttgaacaaatattagcatatccaattgac 1675319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 3395939 - 3395987
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  ||| | |||||||| ||||||||||||||||    
T  3395939 taagcttcctttttgttgattcctttgctctcttttgttcttccagaac 3395987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 8106064 - 8106096
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  8106064 acacttgaacaaatattagcatatccaattgac 8106096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 12601414 - 12601462
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  ||| | |||||||| ||||||||||||||||    
T  12601414 taagcttcctttttgttgattcctttgctctcttttgttcttccagaac 12601462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 16940366 - 16940398
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  16940366 acacttgaacaaatattagcatatccaattgac 16940398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 17247658 - 17247690
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  17247658 acacttgaacaaatattagcatatccaattgac 17247690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 19620890 - 19620842
Alignment:
Q  82 taagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    ||||||||||||||||  ||| | |||||||| ||||||||||||||||    
T  19620890 taagcttcctttttgttgattcctttgctctcttttgttcttccagaac 19620842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 22675282 - 22675234
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    ||||||||| |||| |  |||||||||||||||||||||||| ||||||    
T  22675282 ttttgtctatggtcctatacacttgaacaaatattagcatatccaattg 22675234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 76 - 275
Target Start/End: Complemental strand, 9105 - 8912
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||||||||||||||||  | |||||||||||||||| ||||||||| ||||||  ||||||  ||| ||||| | |||  ||||||||| | || |||    
T  9105 gcaacataagcttccttt--gcaaatttcattgctctcttttgttctttcagaaccaatactttgatttaagacttataaaattttgtctatgttcctgc 9008  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||||||  |||||||        |||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  9007 acacttgaacaaatattagcatatctaattgac---tttttaataccttgttatcatcaaaacataagg-tggtaatgttaaacacattttgttccaaca 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 42 - 275
Target Start/End: Original strand, 59802 - 60034
Alignment:
Q  42 ttcttcagacgttatctccttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccaga--acatatacttg 139  Q
    |||||||||| |||| | ||||||||  ||||| |||||| |||||||||||||||||||| | ||||||| ||||||| |||||||   | ||||||||    
T  59802 ttcttcagactttattttcttcagacgttatcttgcaacacaagcttcctttttgtaaattacgttgctcttatttgttattccagagcgcctatacttg 59901  T
Q  140 aattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    | | |||||||||||| ||||| |||| |||| || ||||||||| |||||||| ||||||||||||||        |||||||||||||||||||||||    
T  59902 attcaaagacatttaaatttttatctatggtcctgtacacttgaagaaatattaacatattcaattgac--atttttaataccttgttatcatcaaaact 59999  T
Q  240 taaggatggtaatgttaaacacattttattccaaca 275  Q
     || | ||||| | ||||||||||| | ||||||||    
T  60000 caaag-tggtattattaaacacattatgttccaaca 60034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 76 - 275
Target Start/End: Original strand, 4551 - 4744
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    ||||||||||||||||||  |||| || ||||||||||||||||| || ||||||  |||| |   || ||||| | ||| |||| ||||| |||| |||    
T  4551 gcaacataagcttccttt--gtaatttccattgctctcatttgttttttcagaaccaataccttgttttaagacttataaattttagtctatggtcctgc 4648  T
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||    
T  4649 acacttgaacaaatattagcatatccaattgac---tttttaataccttgttatcatcaaaacttaagg-tgacaatgttaaacacattttgttccaaca 4744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 31906 - 32115
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    ||||||||| | ||| |||||||||||||| |||||   |||| ||||| |||| |||||||||||| |||   ||| |||||| ||||  | ||| |||    
T  31906 cttcagactatgtcttgcaacataagcttcatttttc--aattacattgttctcttttgttcttccaaaaccattacctgaatttaagatttataaattt 32003  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| | || ||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||| | || |||||||||||    
T  32004 ttgtctatgatcctgcacacttgaacaaatattagcatatccaattgac---tttttaataccttgttatcatcaaaacttaaag-tgataatgttaaac 32099  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  32100 acattttgttccaaca 32115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 112471 - 112680
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||||| | || ||||||||||||||||||  | ||||| ||||  |||| ||||||||| ||||||  ||| ||  ||| ||||| | |||  ||    
T  112471 cttcagactcaaacttgcaacataagcttccttt--gcaaattccatttatctcttttgttctttcagaaccaatattttgatttaagacttataaaatt 112568  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    ||||||| | || ||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||| ||||| |||||| |||||||    
T  112569 ttgtctatgatcctgcacacttgaacaaatattagcatatccaattgac---tttttaataccttgttatcatcaaaacataagg-tggtaacgttaaac 112664  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  112665 acattttgttccaaca 112680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 116081 - 116288
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||||| | || ||||||||||||||||||  | ||||| |||||||||| ||| ||||| ||||||  ||| ||  ||| ||||| | |||   |    
T  116081 cttcagactcaaacttgcaacataagcttccttt--gcaaattccattgctctcttttcttctttcagaaccaatattttgatttaagacttataaaact 116178  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
      ||||| |||| ||||||||||||||||||||||||||| |||||||         |||| ||||||||||||||||| ||| | |||||| ||||||     
T  116179 --gtctatggtcctgcacacttgaacaaatattagcatatccaattga---atttttaatatcttgttatcatcaaaacataaag-tggtaacgttaaag 116272  T
Q  260 acattttattccaaca 275  Q
    ||||||| ||||||||    
T  116273 acattttgttccaaca 116288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 19353 - 19483
Alignment:
Q  76 gcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgc 175  Q
    |||||| |||||||||||||||| |||  ||| |||||||||||||||||| ||| ||| ||| | ||||||||| |||| ||| |||||| |||| | |    
T  19353 gcaacacaagcttcctttttgtagattcaatttctctcatttgttcttccataacctatgcttcatttaaagacacttaaatttgtgtctatggtcctac 19452  T
Q  176 acacttgaacaaatattagcatattcaattg 206  Q
    |||||||||||||||||||||||| ||||||    
T  19453 acacttgaacaaatattagcatatccaattg 19483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 273
Target Start/End: Complemental strand, 3818 - 3642
Alignment:
Q  93 tttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatatt 192  Q
    ||||| ||||||||||||||| ||||||||||||||||  ||||||||| | ||||| | ||| |||||||||| || | |||| | ||||| |||||||    
T  3818 tttgttaatttcattgctctcttttgttcttccagaactaatacttgaaattaagacttataaatttttgtctatgggcctgcatatttgaaaaaatatt 3719  T
Q  193 agcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaa 273  Q
    ||||||| ||||||||        | ||  |||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  3718 agcatatccaattgac---tttttattattttgttatcatcaaaacttaagg-tggtaatgttaaacacagtttgttccaa 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 1272 - 1110
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    ||||||||||||||||||||||||| ||  ||| ||  | ||||| | ||||||| ||||| |||| |||||||||||||||||||||| |||| |||||    
T  1272 ttgctctcatttgttcttccagaacctaagctttaa--agagacaataaactttt-gtctatggtcctgcacacttgaacaaatattagtatatccaatt 1176  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    || |       |||||||| |||||||| ||||| ||  | |||||||||||||||||||| ||||||||    
T  1175 ga-caatttttaatacctttttatcatc-aaactcaa--agggtaatgttaaacacattttgttccaaca 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 275
Target Start/End: Complemental strand, 31587 - 31377
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||| || ||| |||||| ||||||||||||||||  || |||||| ||| |||||| ||| ||||| ||| ||||||||||||| ||| || |||    
T  31587 cttcagacgctttcttgcaacacaagcttcctttttgtagtttccattgc-ctcttttgtttttctagaacctatgcttgaattaaagatattaaagttt 31489  T
Q  160 ttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaac 259  Q
    | ||||| |||| ||||||||| ||||||||||||||||| |||||| |        |||| |||||||||||||||||| ||  | ||||||||| |||    
T  31488 t-gtctatggtcctgcacacttaaacaaatattagcatatccaattg-ctaatttttaataacttgttatcatcaaaactcaa--agggtaatgttgaac 31393  T
Q  260 acattttattccaaca 275  Q
    | ||||| ||||||||    
T  31392 agattttgttccaaca 31377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 275
Target Start/End: Original strand, 145185 - 145370
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||| || ||||| ||||||||| ||||||||||||||| ||||||| | ||| ||  | ||||| | || |||||||||| |||| ||||||||||    
T  145185 aagcttctttcttgtagatttcattgttctcatttgttcttc-agaacatgtgctttaa--agagacactaaa-tttttgtctatggtcctgcacacttg 145280  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||| ||||||| |       ||||| ||||||||||||||||| ||  | ||| |||||||||||||||| ||||||||    
T  145281 aacaaatattagcatatccaattga-caatttttaatacattgttatcatcaaaactcaa--agggtgatgttaaacacattttgttccaaca 145370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 40968 - 41152
Alignment:
Q  86 cttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaac 185  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||| ||  ||| ||  | ||||| |||| |||||||||| |||| ||||||  |||||    
T  40968 cttcctttttgttgattccattgctctcatttgttcttccagaacctaagctttaa--agagacacttaa-tttttgtctatggtcttgcaca-atgaac 41063  T
Q  186 aaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||| ||||||||        ||||||||| ||||||||||||| |||  | | |||||||||||||||||| ||||||||    
T  41064 aaatattagcatatccaattgacaattttttaataccttgctatcatcaaaactctaa--aggctaatgttaaacacattttgttccaaca 41152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 30155 - 30321
Alignment:
Q  104 cattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaa 203  Q
    ||||||||||||||||||||| ||||| ||| | |   | ||||||| | || |||||||||| |||| | ||||||||||||||||||||| ||| |||    
T  30155 cattgctctcatttgttcttc-agaacctatgcat---tcaaagacactgaattttttgtctatggtcctacacacttgaacaaatattagcgtatccaa 30250  T
Q  204 ttgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaacaga 277  Q
    |||||        ||||||||||||||||||||||| || |  |||||||||||||||||||| ||||||||||    
T  30251 ttgac-aaattttaataccttgttatcatcaaaactcaaag--ggtaatgttaaacacattttcttccaacaga 30321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 19199 - 19082
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| |||||||         |||||||||||||||||||||||     | ||| ||||||    
T  19199 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-taatttttaataccttgttatcatcaaaactctcaaagggttatgtta 19101  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  19100 aacacattttgttccaaca 19082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 98881 - 98849
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  98881 acacttgaacaaatattagcatatccaattgac 98849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 25507 - 25388
Alignment:
Q  77 caacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgca 176  Q
    |||||||||||||||||  |||||||||||||||||| |||||| ||||| |||  ||||||   || ||||| | ||| |||||||||| |||| ||||    
T  25507 caacataagcttccttt--gtaaatttcattgctctcgtttgttattccaaaaccaatactttgttttaagacttataaatttttgtctatggtcctgca 25410  T
Q  177 cacttgaacaaatattagcata 198  Q
    ||||||||||||||||| ||||    
T  25409 cacttgaacaaatattaacata 25388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 260
Target Start/End: Complemental strand, 1703 - 1536
Alignment:
Q  93 tttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtct----aaggtcatgcacacttgaacaaa 188  Q
    |||||||||| ||||||||||||||||||||| |||||  ||||||  ||| ||||| | ||| |||| || |    | |||| || |||| ||||||||    
T  1703 tttgtaaattccattgctctcatttgttcttctagaaccaatactttgatttaagacttataaattttagtatatgcatggtcctgtacacgtgaacaaa 1604  T
Q  189 tattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaaca 260  Q
    ||||||||||||||||||| |       ||||| |||||||||||||||| ||||| |||||||||||||||    
T  1603 tattagcatattcaattgaac---ttttaatacattgttatcatcaaaacataagg-tggtaatgttaaaca 1536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 87283 - 87396
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| || | |||||| |||||||||||||||||||| ||||||||        |||||||||||||||||||||| ||| | ||||||||||||    
T  87283 ttttgtctatggccctgcacagttgaacaaatattagcatatccaattgac--atttttaataccttgttatcatcaaaacctaaaggtggtaatgttaa 87380  T
Q  258 acacattttattccaa 273  Q
    ||||||||| ||||||    
T  87381 acacattttgttccaa 87396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 52891 - 53008
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  52891 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaattga-cagtttttaataccttgttatcatcaaaactcttaaagggtaatgtta 52989  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  52990 aacacattttgttccaaca 53008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 56843 - 56960
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||||         |||||||||||||||||||||||     | ||||||||||    
T  56843 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaattga-aagtttttaataccttgttatcatcaaaactcttaaagggtaatgtta 56941  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  56942 aacacattttgttccaaca 56960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1782 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold1782
Description:

Target: scaffold1782; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 738 - 843
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacatttt 266  Q
    |||| ||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||| ||| |  ||||||||||||||||||||    
T  738 ggtcctgcacacttgaacaaatattagcatatccaattgac-aatttttaataccttgttatcatcaaaactctaaag--ggtaatgttaaacacatttt 834  T
Q  267 attccaaca 275  Q
    |||||||||    
T  835 attccaaca 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1782; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 731 - 633
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||| ||||| ||||||||        |||||||||||||||||||||||   | | |||||||||||||||||||| ||||||||    
T  731 acacttgaacaaatattaacatatccaattgac-aatttttaataccttgttatcatcaaaactcttgaagggtaatgttaaacacattttgttccaaca 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 277
Target Start/End: Original strand, 2965 - 3155
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttttt-gtctaaggtcatgcacactt 181  Q
    |||||||| ||||||| |||   ||||||||||||||||||| ||||| ||| ||| | | ||||||| | || ||||| ||||| |||| |||||||||    
T  2965 aagcttccattttgtagattcacttgctctcatttgttcttc-agaacctatgctttattcaaagacactcaaattttttgtctatggtcttgcacactt 3063  T
Q  182 gaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaacaga 277  Q
    ||| |||||||||||||| |||||||         ||||||||||||||||||||||| |   | |||| ||||||||||||||| ||||||||||    
T  3064 gaagaaatattagcatatccaattga--tatttttaataccttgttatcatcaaaactca--tagggtactgttaaacacattttgttccaacaga 3155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 1568 - 1511
Alignment:
Q  217 aataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  1568 aatatcttgttatcatcaaaacttaagg-tggtaatgttaaacacattttgttccaaca 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 276
Target Start/End: Original strand, 10189 - 10377
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  |||  |||||||||||| ||||||||||||  ||||||| || || | ||   ||| |||||||||| |||| ||||||| ||    
T  10189 aagcttccttcttgttgattcaattgctctcattcgttcttccagaatctatactttaaatagacac---taaatttttgtctatggtcctgcacacatg 10285  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaacag 276  Q
    |||||||||||||||||  |||||| |       ||||||||||||||||| ||||| |||  | |||||||||||||||||||| |||||||||    
T  10286 aacaaatattagcatatcaaattga-caatttttaataccttgttatcatccaaactctaa--aaggtaatgttaaacacattttgttccaacag 10377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 30606 - 30708
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||  |  | ||||||||||    
T  30606 tttttgtctatagtcatgtacacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaactctaaaaaggtaatgtta 30704  T
Q  257 aaca 260  Q
    ||||    
T  30705 aaca 30708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 275
Target Start/End: Original strand, 269034 - 269228
Alignment:
Q  73 ctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtca 172  Q
    |||| |||| ||||||||||||| || |||  |||||||||||||||||||| | ||| | | |||   ||||||||| | || |||||||||| ||||     
T  269034 ctagaaacacaagcttcctttttctagattctattgctctcatttgttcttcaa-aacctgtgctt---ttaaagacactaaa-tttttgtctatggtcc 269128  T
Q  173 tgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattcca 272  Q
    |||||| |||||||| ||||||||||| ||||||| |       ||||||||||||||||||||||| ||  | | |||||||||||||||||| |||||    
T  269129 tgcacatttgaacaactattagcatatccaattga-caatttttaataccttgttatcatcaaaactcaa--aggttaatgttaaacacattttgttcca 269225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 275
Target Start/End: Complemental strand, 1421 - 1314
Alignment:
Q  164 ctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacat 263  Q
    |||||||| ||||||||||||||||||||||||  |||||||||         |||| |||||||||||||||| |||||| ||||||||||||||||||    
T  1421 ctaaggtcctgcacacttgaacaaatattagcaatttcaattga---tattttaatatcttgttatcatcaaaatttaagg-tggtaatgttaaacacat 1326  T
Q  264 tttattccaaca 275  Q
    ||| ||||||||    
T  1325 tttgttccaaca 1314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 15051 - 15166
Alignment:
Q  161 tgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaaca 260  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||||| |       |||||||||||||||||||||||     | ||||||||||||||    
T  15051 tgtctatggtcatgtacacttgaacaaatattagcgtattcaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgttaaaca 15149  T
Q  261 cattttattccaacaga 277  Q
    |||||| ||||||||||    
T  15150 cattttgttccaacaga 15166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 36501 - 36384
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  36501 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 36403  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  36402 aacacattttgttccaaca 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 42504 - 42621
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  42504 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 42602  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  42603 aacacattttgttccaaca 42621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 8169 - 8262
Alignment:
Q  104 cattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatat 199  Q
    ||||||||||||||||||||||||||||| | ||| ||  | ||||| | || |||||||||| |||| |||||||||||||||||||||||||||    
T  8169 cattgctctcatttgttcttccagaacatgtgctttaaa-agagacactaaa-tttttgtctatggtcctgcacacttgaacaaatattagcatat 8262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 8076 - 8195
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaa 257  Q
    ||||||||| | || || ||||||||||||||||||||||||  |||||||        ||||||||||||||||||||||||    | |||||||||||    
T  8076 ttttgtctatgatcctgtacacttgaacaaatattagcatatctaattgac-aatttttaataccttgttatcatcaaaactttcaaagggtaatgttaa 8174  T
Q  258 acacattttattccaacagaa 278  Q
    ||||||||| |||||||||||    
T  8175 acacattttcttccaacagaa 8195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 8371 - 8536
Alignment:
Q  106 ttgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaatt 205  Q
    |||||||||||||||||| ||||||  |||| |   || ||||| | ||| |||| || || | || ||||||||||||||||||||||||||| |||||    
T  8371 ttgctctcatttgttctttcagaaccaataccttgttttaagacttataaattttagtatatgctcttgcacacttgaacaaatattagcatatccaatt 8470  T
Q  206 gaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
     | |       ||||||||||||||||| |||| ||||| ||  ||||||||||||||||||||||||||    
T  8471 aaactttt---aataccttgttatcatccaaacataagg-tgacaatgttaaacacattttattccaaca 8536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 159388 - 159509
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    ||||||| || ||||  ||| ||||||||||||||||||||||||||| ||||||| ||  | |||||   |  || ||||||| |||| ||||||||||    
T  159388 aagcttctttcttgttgattccattgctctcatttgttcttccagaacctatactttaa--acagacacgaa--ttattgtctatggtcctgcacacttg 159483  T
Q  183 aacaaatattagcatattcaattgac 208  Q
    ||||||||||||||||| ||||||||    
T  159484 aacaaatattagcatatccaattgac 159509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 39797 - 39848
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||| |||| |||| || |||||||||||||||||||||||| ||||||||    
T  39797 tttttttctatggtcctgtacacttgaacaaatattagcatatccaattgac 39848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 137857 - 137908
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||| |||| |||| || |||||||||||||||||||||||| ||||||||    
T  137857 tttttttctatggtcctgtacacttgaacaaatattagcatatccaattgac 137908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 61192 - 61311
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  |||||||||  || |||    
T  61192 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaaggat--tattgt 61288  T
Q  255 taaacacattttattccaacaga 277  Q
    |||||||||||||||| ||||||    
T  61289 taaacacattttattctaacaga 61311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 272
Target Start/End: Original strand, 12596 - 12709
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||     | ||||||||||    
T  12596 tttttgtctatggtcttgtacacttgaacaaatattagcatatccaattgac--aattttaataccttgttatcatcaaaactctcaaagggtaatgtta 12693  T
Q  257 aacacattttattcca 272  Q
    |||||||||| |||||    
T  12694 aacacattttgttcca 12709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 35951 - 35853
Alignment:
Q  105 attgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaat 204  Q
    |||||||||||||||||||||||||| |||  || ||| | ||||| | ||  ||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  35951 attgctctcatttgttcttccagaacctatggtttaat-agagacactaaa--ttttgtctatggtcctgcacacttgaacaaatattagcatatccaat 35855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 25380 - 25300
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  25380 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 25300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 5927 - 5825
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||  |  | ||||||||||    
T  5927 tttttgtctatagtcatgtacacttgaacaaatattagcatattcaattga-caatttttaataccttgttatcatcaaaactctaaaaaggtaatgtta 5829  T
Q  257 aaca 260  Q
    ||||    
T  5828 aaca 5825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 212739 - 212820
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||| ||||||| |||| | ||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  212739 tttttgtctatggtcatgtacacctaaacaaatattagcatatccaattga-caattcttaataccttgttatcatcaaaact 212820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 245968 - 245917
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||| ||| ||||||||    
T  245968 tttttgtctatagtcatgtacacttgaacaaatattagcgtatccaattgac 245917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 3723 - 3840
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact--taaggatggtaatgt 254  Q
    ||||||||||  |||||| |||||||||||||||||||||||| |||||||         ||||| |||||||||||||||||  |||||||  ||| ||    
T  3723 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattga-taatttttaatactttgttatcatcaaaactcctaaggat--taacgt 3819  T
Q  255 taaacacattttattccaaca 275  Q
    |||||||||||||||||||||    
T  3820 taaacacattttattccaaca 3840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 5416 - 5299
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || || ||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||||||||    
T  5416 tttttgtctatggtcctgtacgcttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaatgtta 5318  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  5317 aacacattttgttccaaca 5299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 10179 - 10296
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||| |       || ||||||||||||||||||||       ||||||||||    
T  10179 tttttgtctatggtcatgtacacttgaacaaatattagcatatccaattga-caatttttaagaccttgttatcatcaaaactctcaatgggtaatgtta 10277  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  10278 aacacattttgttccaaca 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 8282 - 8399
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     |  |||||||||    
T  8282 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactcttaaagtgtaatgtta 8380  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  8381 aacacattttgttccaaca 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 60401 - 60451
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||| |||| || |||||||||||||||||||||||| |||||||    
T  60401 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga 60451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 115924 - 116022
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    ||||||||||||||||||||| |||||||||| |        ||||||||||||||||||||||     | |||||||||||||||||||| ||||||||    
T  115924 acacttgaacaaatattagcaaattcaattga-caatttttcataccttgttatcatcaaaactctcaaagggtaatgttaaacacattttgttccaaca 116022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 74908 - 75006
Alignment:
Q  107 tgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    ||||||| |||||||||||||||| ||||||| || || | ||   ||| |||||||||| |||| | ||||||||||||||||| ||||||| ||||||    
T  74908 tgctctcgtttgttcttccagaacctatactttaagtagacac---taaatttttgtctatggtcctacacacttgaacaaatataagcatatccaattg 75004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 11328 - 11278
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||||||    
T  11328 ttttgtctatggtcatgtacacttgaacaaatattagcatatccaattgac 11278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 10323 - 10441
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| ||||||||||||||||||||| || |||||||         |||||||||||||||||||||||     | ||||||||||    
T  10323 tttttgtctatggtcatgtacacttgaacaaatattagcaaatccaattga-aaatatttaataccttgttatcatcaaaactcttaaagggtaatgtta 10421  T
Q  257 aacacattttattccaacag 276  Q
    |||| ||||| |||||||||    
T  10422 aacagattttgttccaacag 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 413 - 297
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgtta 256  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||||||||||||||||||||| | | || | ||||||||    
T  413 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaga-gttaatgtta 316  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  315 aacacattttgttccaaca 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 13997 - 14114
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||||| || |||| || |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | ||||| ||||    
T  13997 tttttgtttatggtcttgtacacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaagggtaaagtta 14095  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  14096 aacacattttgttccaaca 14114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 13259 - 13142
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| ||||||||||||||||||||||||  ||||||         |||||||||||||||||||||||     | ||||||||||    
T  13259 tttttgtctatggtcatgtacacttgaacaaatattagcatatcaaattga-aattttttaataccttgttatcatcaaaactctcaaagggtaatgtta 13161  T
Q  257 aacacattttattccaaca 275  Q
    || ||||||| ||||||||    
T  13160 aatacattttgttccaaca 13142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 60610 - 60493
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| |||| || |||||||||||||||||||||||| |||||||         |||||||||||||||| ||||||     | ||||||||||    
T  60610 tttttgtctatggtcctgtacacttgaacaaatattagcatatccaattga-aaaattttaataccttgttatcatgaaaactctcaaagggtaatgtta 60512  T
Q  257 aacacattttattccaaca 275  Q
    |||||||||| ||||||||    
T  60511 aacacattttgttccaaca 60493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 275
Target Start/End: Complemental strand, 244044 - 243864
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaactttttgtctaaggtcatgcacacttg 182  Q
    |||||||||| ||||  ||| ||||||||| ||||||||||||||||| ||| ||| ||  | ||||| | || |||||||||| |||| |||||||       
T  244044 aagcttccttcttgttgattccattgctctaatttgttcttccagaacctatgcttcaa--agagacactaaa-tttttgtctatggtcctgcacac--- 243951  T
Q  183 aacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact-taaggatggtaatgttaaacacattttattccaaca 275  Q
        ||||||||||||| ||||||||        ||||||||||||||||||||||| ||| |  |||||||||||||||||||| ||||||||    
T  243950 ----aatattagcatatccaattgac-aatttttaataccttgttatcatcaaaactctaaag--ggtaatgttaaacacattttgttccaaca 243864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 624 - 771
Alignment:
Q  60 cttcagactctatctagcaacataagcttcctttttgtaaatttcattgctctcatttgttcttccagaacatatacttgaattaaagacatttaacttt 159  Q
    |||||||||||  ||  |||||||||||| ||||  ||||||| ||||||||||||||||| || ||||||  ||||||   || |||||   |||  ||    
T  624 cttcagactctgactttcaacataagcttgcttt--gtaaattccattgctctcatttgttattacagaaccaatacttagttttaagactcgtaaaatt 721  T
Q  160 tt--gtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    ||  ||||| |||| ||||||||||||||||||||||||||  |||||||    
T  722 tttagtctatggtcctgcacacttgaacaaatattagcatagccaattga 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 257 - 308
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  257 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattgac 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 8320 - 8371
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  8320 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattgac 8371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 17496 - 17445
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  17496 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattgac 17445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 21840 - 21789
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  21840 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattgac 21789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 19439 - 19537
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacattttattccaaca 275  Q
    |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||     | | |||||||||||||||||| ||||||||    
T  19439 acacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaactctcaaaggataatgttaaacacattttgttccaaca 19537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 16167 - 16218
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||    
T  16167 tttttgtctatggtcttgtacacttgaacaaatattagcatatccaattgac 16218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 9569 - 9620
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  9569 tttttgtctatagtcatgtacacttgaacaaatattagcatatccaattgac 9620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 3065 - 2962
Alignment:
Q  168 ggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgttaaacacatttta 267  Q
    |||| ||||||||||||||||||||||||||| ||||||| |       ||||| ||||||| |||||||||||||| |   ||||| |||||||||||     
T  3065 ggtcttgcacacttgaacaaatattagcatatccaattgaac---ttttaatacattgttattatcaaaacttaagg-taacaatgtaaaacacattttg 2970  T
Q  268 ttccaaca 275  Q
    ||||||||    
T  2969 ttccaaca 2962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 6433 - 6316
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaa--cttaaggatggtaatgt 254  Q
    ||||||||||  ||| || |||||||||||||||||||||||| ||||||| |       ||||| |||||||||||||||  |||||||  | ||||||    
T  6433 tttttgtctatagtcctgtacacttgaacaaatattagcatatccaattga-caatttttaatactttgttatcatcaaaactcttaagg--gttaatgt 6337  T
Q  255 taaacacattttattccaaca 275  Q
    | |||||||||| ||||||||    
T  6336 tcaacacattttgttccaaca 6316  T

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Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 23046 - 23163
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    |||||||||| ||||||| |||||| ||||||||||| ||||| ||||||| |       |||||||| ||||||||||||||     | ||||||||||    
T  23046 tttttgtctatggtcatgtacactttaacaaatattaacatatccaattga-caatttttaatacctttttatcatcaaaactctcaaagggtaatgtta 23144  T
Q  257 aacacattttattccaaca 275  Q
    |||| ||||| ||||||||    
T  23145 aacatattttgttccaaca 23163  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 49703 - 49820
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaacttaaggatggtaatgtta 256  Q
    ||||| |||| ||||||| ||||||||||||| |||||||||| ||||||| |       |||||||||||||||||||||| |    | ||||||||||    
T  49703 tttttttctatggtcatgtacacttgaacaaaaattagcatatccaattga-caattttcaataccttgttatcatcaaaaccttcaaagggtaatgtta 49801  T
Q  257 aacacattttattccaaca 275  Q
    |||  ||||| ||||||||    
T  49802 aacttattttgttccaaca 49820  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 103942 - 103991
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattg 206  Q
    ||||||||||||||| || ||||||||| |||||||||||||| ||||||    
T  103942 tttttgtctaaggtcctgtacacttgaaaaaatattagcatatccaattg 103991  T

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Target: scaffold0888 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 3879 - 3808
Alignment:
Q  136 cttgaattaaagacatttaactttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||||||||| | || ||||| |||| |||| | |||||||||||||||||| |||||| ||||||||    
T  3879 cttgaattaaagacactaaa-tttttctctatggtcctacacacttgaacaaatatttgcatatccaattgac 3808  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 9927 - 9880
Alignment:
Q  83 aagcttcctttttgtaaatttcattgctctcatttgttcttccagaac 130  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  9927 aagcttcctttttgttgattccattgctctcttttgttcttccagaac 9880  T

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Target: scaffold1709 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1709
Description:

Target: scaffold1709; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 4 - 66
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  4 acacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 66  T

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Target: scaffold1331 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 317 - 255
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgaccnnnnnnnaataccttgttatcatcaaaact 239  Q
    |||||||||||||||||||||||| ||||||| |       |||||||||||||||||||||||    
T  317 acacttgaacaaatattagcatatccaattga-caatttttaataccttgttatcatcaaaact 255  T

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Target: scaffold0771 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 861 - 911
Alignment:
Q  157 tttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattga 207  Q
    |||||||||| |||| || ||| |||||||||||||||||||| |||||||    
T  861 tttttgtctatggtcctgtacatttgaacaaatattagcatatccaattga 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 1592 - 1542
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||  ||| || |||||||||||||||||||||||| ||||||||    
T  1592 ttttgtctatagtcctgtacacttgaacaaatattagcatatccaattgac 1542  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 87324 - 87274
Alignment:
Q  158 ttttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||  |||||| |||||||||||||||||||| ||| ||||||||    
T  87324 ttttgtctatagtcatgtacacttgaacaaatattagcgtatccaattgac 87274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 6859 - 6810
Alignment:
Q  159 tttgtctaaggtcatgcacacttgaacaaatattagcatattcaattgac 208  Q
    ||||||||  || ||| |||||||||||||||||||||||| ||||||||    
T  6859 tttgtctatagttatgtacacttgaacaaatattagcatatccaattgac 6810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 9013 - 8981
Alignment:
Q  247 ggtaatgttaaacacattttattccaacagaat 279  Q
    |||||||||||||||||||| ||||||||||||    
T  9013 ggtaatgttaaacacattttgttccaacagaat 8981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 27779 - 27747
Alignment:
Q  176 acacttgaacaaatattagcatattcaattgac 208  Q
    |||||||||||||||||||||||| ||||||||    
T  27779 acacttgaacaaatattagcatatccaattgac 27747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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