View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13693_low_12 (Length: 210)
Name: NF13693_low_12
Description: NF13693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13693_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 32882096 - 32882284
Alignment:
| Q |
1 |
taattcaatttattttacatttttcataaatctgctacctagacgtaaccgtttttattttctttcttaaaacctcccctcacgcatatcccgcttcccg |
100 |
Q |
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| T |
32882096 |
taattcaatttattttacatttttcataaatctgctacctagacgtaaccgtttttattttctttcttataaactcgcctcacgcatattccgcttcccg |
32882195 |
T |
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| Q |
101 |
cccccgtcccgtcccatc-tccttattttcggacagtgatcgccttaagggccaatgaagcttctctcaatcaccgccgtcaaccaccg |
188 |
Q |
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|| |||| |||| || || || |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
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| T |
32882196 |
cctccgttccgttccttcttctttattttctgacagtgatcgccttaagggcccatgaagcttctctcaatcaccgccgtcaatcaccg |
32882284 |
T |
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