View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13695_low_1 (Length: 558)

Name: NF13695_low_1
Description: NF13695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13695_low_1
NF13695_low_1
[»] chr3 (64 HSPs)
chr3 (8-475)||(52420949-52421416)
chr3 (201-300)||(34707696-34707795)
chr3 (469-539)||(52420860-52420930)
chr3 (194-283)||(43079934-43080023)
chr3 (201-292)||(10667402-10667493)
chr3 (194-297)||(40240563-40240666)
chr3 (201-264)||(40581096-40581159)
chr3 (194-300)||(52021243-52021350)
chr3 (209-300)||(53218023-53218114)
chr3 (199-283)||(22809193-22809278)
chr3 (199-283)||(2086691-2086775)
chr3 (206-292)||(10521163-10521249)
chr3 (209-283)||(29270373-29270447)
chr3 (199-264)||(3870245-3870310)
chr3 (202-281)||(3845860-3845939)
chr3 (206-300)||(42956162-42956256)
chr3 (175-283)||(45331295-45331404)
chr3 (199-264)||(51409395-51409460)
chr3 (201-276)||(10448778-10448853)
chr3 (206-292)||(585029-585115)
chr3 (199-297)||(3645305-3645402)
chr3 (206-264)||(5129834-5129892)
chr3 (201-279)||(7292684-7292762)
chr3 (199-297)||(29614196-29614293)
chr3 (206-267)||(21296775-21296836)
chr3 (213-282)||(23816172-23816240)
chr3 (199-300)||(28741197-28741298)
chr3 (199-279)||(32900732-32900812)
chr3 (208-298)||(36182514-36182605)
chr3 (202-300)||(43971830-43971928)
chr3 (199-264)||(3876282-3876347)
chr3 (201-283)||(4257300-4257383)
chr3 (206-282)||(10272131-10272205)
chr3 (224-281)||(37243493-37243550)
chr3 (207-283)||(47403762-47403839)
chr3 (176-300)||(48597850-48597975)
chr3 (227-291)||(20365427-20365491)
chr3 (208-292)||(37456425-37456508)
chr3 (199-290)||(4974313-4974404)
chr3 (199-297)||(20894505-20894602)
chr3 (191-257)||(30198982-30199048)
chr3 (206-264)||(30473162-30473220)
chr3 (246-300)||(37778182-37778236)
chr3 (211-264)||(11528905-11528958)
chr3 (209-264)||(29002726-29002779)
chr3 (206-262)||(36266253-36266309)
chr3 (206-262)||(41601352-41601408)
chr3 (327-362)||(23555532-23555567)
chr3 (201-263)||(24842126-24842189)
chr3 (206-260)||(25341291-25341348)
chr3 (188-227)||(27769762-27769801)
chr3 (191-257)||(37601053-37601120)
chr3 (206-265)||(38524097-38524156)
chr3 (207-266)||(51662814-51662873)
chr3 (201-263)||(27769650-27769711)
chr3 (206-260)||(29830793-29830847)
chr3 (207-269)||(54547812-54547873)
chr3 (207-300)||(1516081-1516173)
chr3 (223-264)||(15444002-15444043)
chr3 (332-405)||(20685697-20685770)
chr3 (199-263)||(16687087-16687150)
chr3 (206-234)||(23555493-23555521)
chr3 (208-300)||(32901131-32901223)
chr3 (190-234)||(50502014-50502058)
[»] chr1 (71 HSPs)
chr1 (191-300)||(6337739-6337849)
chr1 (209-300)||(15515330-15515421)
chr1 (194-300)||(48819296-48819402)
chr1 (176-300)||(1005318-1005443)
chr1 (206-300)||(4068124-4068218)
chr1 (194-292)||(31378742-31378840)
chr1 (179-283)||(16888966-16889070)
chr1 (207-283)||(26988158-26988234)
chr1 (206-300)||(37329395-37329489)
chr1 (194-283)||(3069854-3069943)
chr1 (212-297)||(41196696-41196781)
chr1 (201-300)||(35590134-35590233)
chr1 (199-264)||(18327526-18327591)
chr1 (199-298)||(28690004-28690105)
chr1 (199-283)||(5243404-5243487)
chr1 (199-283)||(15791386-15791469)
chr1 (206-282)||(37712077-37712152)
chr1 (206-300)||(9572767-9572862)
chr1 (194-292)||(45267462-45267561)
chr1 (208-283)||(46501001-46501076)
chr1 (206-264)||(10850090-10850148)
chr1 (206-264)||(13038956-13039014)
chr1 (198-300)||(22593390-22593492)
chr1 (199-297)||(32497258-32497355)
chr1 (199-264)||(1565401-1565466)
chr1 (199-260)||(36423004-36423065)
chr1 (208-283)||(26946104-26946180)
chr1 (201-264)||(10082254-10082317)
chr1 (199-266)||(28122618-28122685)
chr1 (207-297)||(17628411-17628500)
chr1 (199-281)||(26435177-26435258)
chr1 (206-264)||(39941450-39941508)
chr1 (211-281)||(42591396-42591466)
chr1 (206-263)||(10365180-10365237)
chr1 (194-259)||(26936856-26936920)
chr1 (191-260)||(51409730-51409799)
chr1 (199-283)||(20169266-20169350)
chr1 (225-281)||(23544819-23544875)
chr1 (201-260)||(35897646-35897705)
chr1 (201-263)||(41003391-41003454)
chr1 (207-297)||(15631914-15632004)
chr1 (206-264)||(39941379-39941436)
chr1 (206-264)||(39941519-39941577)
chr1 (199-264)||(35282613-35282678)
chr1 (199-264)||(37148112-37148177)
chr1 (199-264)||(37156937-37157002)
chr1 (201-298)||(49971255-49971352)
chr1 (199-264)||(51162271-51162336)
chr1 (199-253)||(391170-391225)
chr1 (214-261)||(1265715-1265762)
chr1 (201-264)||(26542977-26543040)
chr1 (209-279)||(47413385-47413454)
chr1 (199-292)||(17814193-17814285)
chr1 (194-283)||(41129991-41130080)
chr1 (200-263)||(1321545-1321608)
chr1 (220-276)||(5610531-5610587)
chr1 (201-297)||(13412439-13412534)
chr1 (199-279)||(25485750-25485830)
chr1 (227-283)||(39658323-39658379)
chr1 (208-264)||(46473105-46473161)
chr1 (178-260)||(8410129-8410211)
chr1 (223-262)||(9177732-9177771)
chr1 (208-292)||(19284907-19284993)
chr1 (327-358)||(45267452-45267483)
chr1 (201-283)||(5347159-5347240)
chr1 (199-292)||(3116053-3116145)
chr1 (188-225)||(36259225-36259262)
chr1 (206-283)||(50919497-50919573)
chr1 (228-264)||(18317032-18317068)
chr1 (208-264)||(19220185-19220240)
chr1 (194-242)||(36178533-36178580)
[»] chr5 (81 HSPs)
chr5 (194-299)||(28625477-28625582)
chr5 (201-300)||(12986997-12987096)
chr5 (208-300)||(6144749-6144841)
chr5 (206-300)||(12467273-12467368)
chr5 (206-283)||(41534632-41534709)
chr5 (201-300)||(13060585-13060684)
chr5 (201-283)||(1473360-1473442)
chr5 (176-355)||(42706774-42706958)
chr5 (209-300)||(11912085-11912176)
chr5 (178-300)||(41059772-41059895)
chr5 (209-299)||(1868858-1868948)
chr5 (199-298)||(22201917-22202020)
chr5 (199-264)||(10537238-10537303)
chr5 (207-264)||(24030225-24030282)
chr5 (207-264)||(42852032-42852089)
chr5 (206-262)||(29922210-29922266)
chr5 (201-300)||(17657246-17657345)
chr5 (212-283)||(31637094-31637165)
chr5 (199-300)||(40452460-40452562)
chr5 (199-300)||(1576633-1576733)
chr5 (199-300)||(1608082-1608182)
chr5 (199-292)||(2878668-2878760)
chr5 (227-300)||(41419531-41419604)
chr5 (200-260)||(43268644-43268704)
chr5 (178-260)||(1942990-1943073)
chr5 (206-269)||(3977484-3977547)
chr5 (199-262)||(17128280-17128343)
chr5 (194-300)||(35536839-35536948)
chr5 (206-300)||(7364292-7364386)
chr5 (194-260)||(40696998-40697064)
chr5 (208-297)||(11991316-11991404)
chr5 (199-280)||(33757090-33757170)
chr5 (208-297)||(38461268-38461357)
chr5 (206-297)||(26003006-26003097)
chr5 (201-300)||(43319007-43319106)
chr5 (201-283)||(15122549-15122630)
chr5 (198-300)||(28357353-28357455)
chr5 (199-264)||(13625540-13625605)
chr5 (206-262)||(2670084-2670140)
chr5 (208-287)||(342001-342080)
chr5 (199-262)||(11163290-11163353)
chr5 (201-264)||(36106758-36106821)
chr5 (206-257)||(43265967-43266018)
chr5 (208-298)||(6125298-6125387)
chr5 (201-283)||(15709892-15709973)
chr5 (199-264)||(17868195-17868261)
chr5 (191-300)||(28357132-28357244)
chr5 (208-277)||(3520509-3520577)
chr5 (206-283)||(11706918-11706995)
chr5 (199-280)||(33667396-33667476)
chr5 (220-264)||(5559941-5559985)
chr5 (220-300)||(23087762-23087842)
chr5 (213-264)||(18602618-18602669)
chr5 (191-300)||(29659055-29659163)
chr5 (199-297)||(5203420-5203517)
chr5 (201-283)||(7984109-7984191)
chr5 (200-298)||(29418737-29418835)
chr5 (216-266)||(32508156-32508206)
chr5 (206-291)||(6025977-6026061)
chr5 (220-257)||(6150400-6150437)
chr5 (199-292)||(15413994-15414087)
chr5 (191-292)||(27805910-27806010)
chr5 (199-275)||(4728848-4728923)
chr5 (176-227)||(28357254-28357306)
chr5 (208-263)||(1372013-1372068)
chr5 (208-279)||(40152880-40152951)
chr5 (327-358)||(40696988-40697019)
chr5 (209-264)||(42558740-42558794)
chr5 (201-275)||(17668404-17668477)
chr5 (205-267)||(32131332-32131394)
chr5 (208-266)||(43010646-43010704)
chr5 (231-264)||(2577448-2577481)
chr5 (199-228)||(3520452-3520481)
chr5 (206-289)||(7110981-7111060)
chr5 (199-264)||(14243825-14243890)
chr5 (201-262)||(22573657-22573718)
chr5 (199-260)||(25332261-25332322)
chr5 (222-263)||(29658074-29658115)
chr5 (206-263)||(30852180-30852237)
chr5 (206-260)||(33803814-33803870)
chr5 (235-264)||(39154780-39154809)
[»] chr4 (76 HSPs)
chr4 (200-300)||(28074368-28074467)
chr4 (169-264)||(7148743-7148839)
chr4 (199-300)||(23297440-23297538)
chr4 (206-300)||(29877648-29877742)
chr4 (199-300)||(12495627-12495730)
chr4 (194-300)||(488367-488473)
chr4 (194-300)||(36740901-36741007)
chr4 (199-292)||(35124389-35124482)
chr4 (199-300)||(48591407-48591508)
chr4 (191-300)||(55638064-55638173)
chr4 (192-264)||(896965-897037)
chr4 (194-300)||(52274103-52274209)
chr4 (220-292)||(17222852-17222924)
chr4 (207-291)||(18424270-18424353)
chr4 (199-283)||(23335644-23335728)
chr4 (194-292)||(825679-825777)
chr4 (199-300)||(948074-948176)
chr4 (201-283)||(27368152-27368234)
chr4 (194-300)||(39932737-39932843)
chr4 (191-292)||(8601195-8601296)
chr4 (207-300)||(38345805-38345897)
chr4 (207-264)||(43699502-43699559)
chr4 (208-280)||(2494403-2494475)
chr4 (199-283)||(46175979-46176062)
chr4 (220-283)||(21216328-21216391)
chr4 (206-300)||(8057071-8057165)
chr4 (208-282)||(35010222-35010296)
chr4 (199-263)||(3564222-3564286)
chr4 (201-297)||(4603318-4603413)
chr4 (211-283)||(41228917-41228989)
chr4 (208-280)||(52700547-52700619)
chr4 (201-264)||(212967-213029)
chr4 (177-283)||(2141620-2141727)
chr4 (206-297)||(46650280-46650371)
chr4 (213-300)||(46704253-46704340)
chr4 (210-264)||(4331350-4331404)
chr4 (176-261)||(29615352-29615438)
chr4 (206-292)||(43415280-43415366)
chr4 (214-283)||(2405205-2405273)
chr4 (199-260)||(8130490-8130551)
chr4 (199-300)||(15184549-15184649)
chr4 (201-281)||(42611870-42611950)
chr4 (204-257)||(48686956-48687009)
chr4 (199-279)||(42617234-42617313)
chr4 (201-264)||(1374382-1374445)
chr4 (208-283)||(10794910-10794984)
chr4 (212-283)||(32628793-32628864)
chr4 (218-264)||(29997329-29997375)
chr4 (207-264)||(30956692-30956750)
chr4 (199-264)||(7206605-7206670)
chr4 (230-283)||(28663606-28663659)
chr4 (199-264)||(40699358-40699423)
chr4 (184-264)||(43983401-43983482)
chr4 (199-279)||(19725295-19725375)
chr4 (208-283)||(10796397-10796471)
chr4 (217-300)||(18630878-18630961)
chr4 (225-300)||(36255019-36255094)
chr4 (199-297)||(47202828-47202925)
chr4 (199-260)||(11298595-11298656)
chr4 (206-275)||(26206362-26206431)
chr4 (194-227)||(34633503-34633536)
chr4 (199-279)||(2548051-2548131)
chr4 (247-298)||(22273830-22273881)
chr4 (178-264)||(22397324-22397411)
chr4 (327-358)||(28663415-28663446)
chr4 (201-264)||(33533932-33533995)
chr4 (327-358)||(36740891-36740922)
chr4 (208-283)||(43740076-43740150)
chr4 (212-283)||(45018548-45018619)
chr4 (206-244)||(29996678-29996716)
chr4 (329-358)||(488454-488483)
chr4 (201-278)||(9201655-9201731)
chr4 (199-292)||(15179820-15179912)
chr4 (209-246)||(38515689-38515726)
chr4 (201-265)||(22117358-22117421)
chr4 (229-281)||(42153193-42153245)
[»] chr2 (63 HSPs)
chr2 (200-300)||(4026929-4027028)
chr2 (206-297)||(33321298-33321389)
chr2 (206-300)||(13056310-13056404)
chr2 (199-264)||(25836731-25836796)
chr2 (201-300)||(755724-755824)
chr2 (179-300)||(887393-887515)
chr2 (194-280)||(12223849-12223935)
chr2 (199-300)||(11776986-11777087)
chr2 (199-300)||(38216025-38216122)
chr2 (199-300)||(4090491-4090592)
chr2 (199-264)||(34913409-34913474)
chr2 (215-300)||(36501498-36501583)
chr2 (185-264)||(12238502-12238582)
chr2 (201-297)||(21788461-21788557)
chr2 (201-264)||(33321422-33321485)
chr2 (199-283)||(2790070-2790155)
chr2 (224-300)||(735991-736067)
chr2 (201-300)||(29774749-29774848)
chr2 (207-264)||(11072955-11073013)
chr2 (215-281)||(12442831-12442897)
chr2 (201-291)||(37409647-37409737)
chr2 (199-292)||(32522037-32522129)
chr2 (199-300)||(38471774-38471875)
chr2 (186-262)||(42839341-42839418)
chr2 (201-297)||(5903537-5903633)
chr2 (207-262)||(8832464-8832522)
chr2 (206-278)||(9140735-9140806)
chr2 (207-283)||(43787803-43787879)
chr2 (201-300)||(4004823-4004922)
chr2 (201-280)||(32366154-32366232)
chr2 (219-262)||(39592271-39592314)
chr2 (206-300)||(12683589-12683683)
chr2 (206-283)||(29133667-29133744)
chr2 (220-292)||(8342991-8343062)
chr2 (220-292)||(12267020-12267092)
chr2 (178-260)||(43796910-43796993)
chr2 (199-241)||(27703500-27703542)
chr2 (206-260)||(37419987-37420040)
chr2 (207-261)||(41554602-41554656)
chr2 (199-292)||(2401613-2401705)
chr2 (199-264)||(5516077-5516142)
chr2 (176-252)||(7028152-7028229)
chr2 (199-260)||(8441475-8441536)
chr2 (207-248)||(35731148-35731189)
chr2 (199-260)||(40301354-40301414)
chr2 (206-255)||(42382621-42382670)
chr2 (177-252)||(7041373-7041449)
chr2 (208-264)||(15155824-15155880)
chr2 (227-279)||(42064881-42064933)
chr2 (199-262)||(17531951-17532013)
chr2 (327-358)||(18276918-18276949)
chr2 (206-269)||(22422183-22422245)
chr2 (199-269)||(2757085-2757153)
chr2 (220-262)||(17546414-17546456)
chr2 (207-292)||(30995891-30995979)
chr2 (327-357)||(35997287-35997317)
chr2 (199-264)||(10574181-10574245)
chr2 (216-264)||(13097936-13097985)
chr2 (199-264)||(27881016-27881081)
chr2 (193-230)||(37419913-37419950)
chr2 (199-279)||(1837002-1837082)
chr2 (227-291)||(16108114-16108178)
chr2 (213-245)||(27243575-27243607)
[»] chr8 (52 HSPs)
chr8 (177-300)||(32975666-32975790)
chr8 (212-283)||(35168441-35168512)
chr8 (176-261)||(28879036-28879122)
chr8 (199-292)||(38895661-38895754)
chr8 (194-300)||(34286547-34286652)
chr8 (194-262)||(32213043-32213111)
chr8 (206-300)||(10298909-10299003)
chr8 (194-264)||(35453407-35453477)
chr8 (199-300)||(35285930-35286031)
chr8 (199-300)||(42363300-42363400)
chr8 (186-292)||(24350510-24350617)
chr8 (180-264)||(2669630-2669715)
chr8 (199-283)||(42102109-42102192)
chr8 (199-292)||(8216894-8216989)
chr8 (206-292)||(16972347-16972434)
chr8 (201-300)||(19327871-19327969)
chr8 (206-260)||(13265493-13265547)
chr8 (199-260)||(32131442-32131503)
chr8 (207-300)||(34102669-34102762)
chr8 (206-264)||(1089022-1089080)
chr8 (194-292)||(9131119-9131217)
chr8 (210-300)||(14942437-14942527)
chr8 (199-297)||(19925559-19925657)
chr8 (206-283)||(12607089-12607165)
chr8 (199-300)||(38338834-38338934)
chr8 (208-292)||(37410904-37410987)
chr8 (193-264)||(41145414-41145488)
chr8 (206-297)||(11988206-11988296)
chr8 (206-300)||(13131439-13131542)
chr8 (206-264)||(14709555-14709613)
chr8 (191-264)||(28280702-28280776)
chr8 (199-264)||(2289905-2289970)
chr8 (199-264)||(29243083-29243147)
chr8 (200-264)||(16706119-16706183)
chr8 (216-264)||(24087189-24087237)
chr8 (206-264)||(23412743-23412801)
chr8 (201-291)||(38195491-38195580)
chr8 (208-265)||(4326231-4326288)
chr8 (223-300)||(24866934-24867011)
chr8 (208-292)||(218245-218327)
chr8 (208-292)||(694805-694887)
chr8 (208-292)||(699014-699096)
chr8 (208-292)||(731868-731950)
chr8 (208-292)||(855764-855846)
chr8 (178-257)||(1184763-1184843)
chr8 (201-292)||(14262330-14262421)
chr8 (201-264)||(26046975-26047038)
chr8 (207-279)||(29218255-29218329)
chr8 (206-300)||(8752815-8752909)
chr8 (194-247)||(402124-402177)
chr8 (199-264)||(32924231-32924296)
chr8 (206-254)||(19925417-19925465)
[»] scaffold0157 (1 HSPs)
scaffold0157 (199-300)||(24747-24850)
[»] chr7 (63 HSPs)
chr7 (174-292)||(29378621-29378740)
chr7 (194-283)||(47511040-47511129)
chr7 (201-280)||(30181554-30181633)
chr7 (199-264)||(44613492-44613557)
chr7 (206-300)||(14691282-14691377)
chr7 (201-264)||(34922935-34922998)
chr7 (206-283)||(20888582-20888660)
chr7 (196-266)||(41037752-41037821)
chr7 (201-298)||(29390536-29390632)
chr7 (199-300)||(38372560-38372661)
chr7 (206-264)||(41094227-41094285)
chr7 (206-283)||(48021648-48021724)
chr7 (201-300)||(22032766-22032865)
chr7 (201-292)||(22575590-22575681)
chr7 (208-299)||(23356475-23356566)
chr7 (194-248)||(33288134-33288188)
chr7 (208-290)||(43391732-43391814)
chr7 (207-264)||(7098119-7098176)
chr7 (207-260)||(40629440-40629492)
chr7 (208-292)||(19308482-19308566)
chr7 (206-290)||(23119913-23119997)
chr7 (201-300)||(41677378-41677478)
chr7 (206-297)||(48895305-48895401)
chr7 (220-279)||(14536905-14536964)
chr7 (201-264)||(35809094-35809157)
chr7 (201-283)||(14675960-14676041)
chr7 (206-300)||(32917575-32917669)
chr7 (199-264)||(37779303-37779362)
chr7 (207-264)||(31613684-31613741)
chr7 (206-300)||(46743959-46744056)
chr7 (199-300)||(47654397-47654498)
chr7 (199-264)||(14593150-14593217)
chr7 (199-283)||(21027513-21027597)
chr7 (194-254)||(41094144-41094204)
chr7 (216-283)||(6406872-6406939)
chr7 (201-292)||(16958820-16958910)
chr7 (208-279)||(18855274-18855345)
chr7 (206-297)||(44799413-44799502)
chr7 (194-264)||(1054087-1054157)
chr7 (206-264)||(18837231-18837289)
chr7 (220-266)||(28759857-28759903)
chr7 (207-283)||(23137163-23137238)
chr7 (208-264)||(24414534-24414590)
chr7 (201-292)||(16932921-16933011)
chr7 (201-292)||(16938304-16938394)
chr7 (199-282)||(28004586-28004668)
chr7 (201-264)||(35246676-35246738)
chr7 (206-292)||(48949729-48949815)
chr7 (220-263)||(49104401-49104444)
chr7 (201-239)||(21249160-21249198)
chr7 (320-358)||(29778438-29778476)
chr7 (219-300)||(37465869-37465951)
chr7 (208-266)||(42083434-42083492)
chr7 (206-264)||(47648547-47648605)
chr7 (199-260)||(24371430-24371490)
chr7 (199-260)||(25536280-25536340)
chr7 (199-260)||(26331813-26331874)
chr7 (206-263)||(34927147-34927204)
chr7 (226-283)||(39279458-39279515)
chr7 (201-281)||(991504-991583)
chr7 (194-234)||(17944524-17944564)
chr7 (230-282)||(17944686-17944738)
chr7 (208-288)||(39803035-39803115)
[»] chr6 (55 HSPs)
chr6 (194-283)||(21025227-21025316)
chr6 (206-283)||(24625860-24625937)
chr6 (191-266)||(10054375-10054450)
chr6 (194-264)||(2034248-2034318)
chr6 (201-299)||(2255738-2255836)
chr6 (200-317)||(7267778-7267895)
chr6 (194-267)||(10755296-10755369)
chr6 (199-302)||(8014790-8014893)
chr6 (207-264)||(1240630-1240687)
chr6 (199-292)||(2027167-2027260)
chr6 (199-263)||(30533982-30534046)
chr6 (199-317)||(3210962-3211085)
chr6 (199-282)||(6776810-6776893)
chr6 (201-300)||(32675872-32675971)
chr6 (199-264)||(9894768-9894833)
chr6 (201-300)||(6758631-6758730)
chr6 (201-259)||(12817116-12817174)
chr6 (199-261)||(21891360-21891422)
chr6 (199-283)||(10873988-10874070)
chr6 (191-283)||(29052326-29052419)
chr6 (201-264)||(6632663-6632726)
chr6 (207-264)||(25430785-25430839)
chr6 (216-279)||(34509931-34509994)
chr6 (199-300)||(10687309-10687413)
chr6 (199-292)||(4808574-4808666)
chr6 (230-283)||(13429488-13429541)
chr6 (199-292)||(21610040-21610133)
chr6 (208-297)||(32165247-32165335)
chr6 (208-260)||(2040209-2040261)
chr6 (207-263)||(23239257-23239313)
chr6 (220-279)||(16589774-16589833)
chr6 (220-279)||(16605547-16605606)
chr6 (193-292)||(9202390-9202493)
chr6 (201-259)||(21871308-21871365)
chr6 (199-297)||(32615401-32615498)
chr6 (199-292)||(10184321-10184413)
chr6 (199-292)||(17914948-17915040)
chr6 (191-264)||(34801069-34801141)
chr6 (199-263)||(1468178-1468241)
chr6 (208-264)||(8011065-8011121)
chr6 (200-291)||(3829911-3830002)
chr6 (211-290)||(7446855-7446934)
chr6 (199-246)||(9201768-9201815)
chr6 (220-291)||(18078238-18078309)
chr6 (201-264)||(29623496-29623559)
chr6 (254-292)||(715902-715940)
chr6 (206-283)||(991282-991360)
chr6 (220-269)||(5958355-5958404)
chr6 (222-263)||(6958649-6958690)
chr6 (199-264)||(34413322-34413386)
chr6 (199-260)||(35111358-35111419)
chr6 (208-260)||(715948-716000)
chr6 (210-242)||(1172349-1172381)
chr6 (221-269)||(10730255-10730303)
chr6 (237-300)||(35071411-35071475)
[»] scaffold0024 (1 HSPs)
scaffold0024 (199-264)||(97225-97290)
[»] scaffold0012 (1 HSPs)
scaffold0012 (201-292)||(178504-178596)
[»] scaffold0332 (2 HSPs)
scaffold0332 (194-300)||(14729-14835)
scaffold0332 (191-283)||(14853-14946)
[»] scaffold0041 (2 HSPs)
scaffold0041 (206-264)||(109011-109069)
scaffold0041 (194-254)||(109092-109152)
[»] scaffold0512 (1 HSPs)
scaffold0512 (208-267)||(4076-4135)
[»] scaffold0048 (1 HSPs)
scaffold0048 (208-283)||(58868-58943)
[»] scaffold0057 (2 HSPs)
scaffold0057 (206-264)||(43835-43893)
scaffold0057 (199-254)||(24418-24472)
[»] scaffold1367 (1 HSPs)
scaffold1367 (201-282)||(1062-1143)
[»] scaffold0299 (1 HSPs)
scaffold0299 (201-281)||(11302-11382)
[»] scaffold0027 (1 HSPs)
scaffold0027 (191-264)||(142333-142406)
[»] scaffold0004 (2 HSPs)
scaffold0004 (180-264)||(227688-227773)
scaffold0004 (206-297)||(242626-242716)
[»] scaffold0022 (1 HSPs)
scaffold0022 (194-254)||(89282-89342)
[»] scaffold0071 (1 HSPs)
scaffold0071 (223-264)||(18148-18189)
[»] scaffold0006 (1 HSPs)
scaffold0006 (201-297)||(278978-279073)


Alignment Details
Target: chr3 (Bit Score: 444; Significance: 0; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 8 - 475
Target Start/End: Complemental strand, 52421416 - 52420949
Alignment:
Q  8 tgagatgaaacaatacctgaactttgacagcattcgagagacagggccgcattgttctgttacccaactcgtctaccaagcaaacacactggtagaaagc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52421416 tgagatgaaacaatacctgaactttgacagcattcgagagacagggccgcattgttctgttacccaactcgtctaccaagcaaacacactggtagaaagc 52421317  T
Q  108 caagttaatatgaaaataaaaaagtatttggtatttgtagaagttattagtcacaatgatatataagacccgtttgtattggtttattttaagcttacgc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52421316 caagttaatatgaaaataaaaaagtatttggtatttgtagaagttattagtcacaatgatatataagacccgtttgtattggcttattttaagcttacgc 52421217  T
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaactgagaacg 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  52421216 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttagcgagaactgagaact 52421117  T
Q  308 tatgaattaaagaaaattaatttatttgcataagctcaaaaataagtcaatacaatcagcctatagtttgtttgaattgacacatttgagcttatctacg 407  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52421116 tatgaattaaagaaaatttatttatttgcataagctcaaaaataagttaatacaatcagcctatagtttgtttgaattgacacatttgagcttatctacg 52421017  T
Q  408 gacgtaagtgcttggaagattgtttgtatgagattatgaaaacaacttatttgctattttcagcttat 475  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52421016 gacgtaagtgcttggaagattgtttgtatgagcttatgaaaacaacttatttgctattttcagcttat 52420949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 34707795 - 34707696
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||| || |||||||||||||    
T  34707795 cttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagatacaattttcgttagcgagaact 34707696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 469 - 539
Target Start/End: Complemental strand, 52420930 - 52420860
Alignment:
Q  469 agcttatgaaaacaatttgacttaattctcagttgtttatccaaacagggccataacataaaaagtaaggg 539  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52420930 agcttatgaaaacaatttgacttaattctctgttgtttatccaaacagggccataacataaaaagtaaggg 52420860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 43080023 - 43079934
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  43080023 tttttagcttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 43079934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 10667402 - 10667493
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || | || ||||||||| ||  ||||||||    
T  10667402 cttacgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttag 10667493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 40240666 - 40240563
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |  | ||||||||||||| || |||||     
T  40240666 tttttagcttatgcaaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagt 40240567  T
Q  294 gaga 297  Q
    ||||    
T  40240566 gaga 40240563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 40581159 - 40581096
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40581159 cttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaa 40581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 52021243 - 52021350
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| || | ||||||||| ||| || |||||    
T  52021243 tttttagcttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttag 52021342  T
Q  293 cgagaact 300  Q
     |||||||    
T  52021343 tgagaact 52021350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 53218114 - 53218023
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |  |||||||||||| || ||||| |||||||    
T  53218114 aataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaattttcgttagtgagaact 53218023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 22809278 - 22809193
Alignment:
Q  199 agcttacgcaaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  | | |||||||||||||    
T  22809278 agcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatacaat 22809193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 2086775 - 2086691
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| | |||||||||| ||||||||||||||| |||| ||||| ||||| |||||||||||||||||| |||||||||||||    
T  2086775 agcttatgtaaataaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaaaatagtttatgaagatacaat 2086691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 10521163 - 10521249
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || | || ||||||||| ||  ||||||||    
T  10521163 gcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttag 10521249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 209 - 283
Target Start/End: Original strand, 29270373 - 29270447
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||||||||||||||||||||||||| ||||| || |||||||||||| || | |||||||||||||    
T  29270373 aataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagatacaat 29270447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 3870310 - 3870245
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  3870310 agcttatgcaaaaaaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaa 3870245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 3845860 - 3845939
Alignment:
Q  202 ttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| ||   |||||||||||    
T  3845860 ttacacaaataaataagcttttatatattattcataagcttgtcaagctagtttatgacaaaacagcatatgaagataca 3845939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 42956256 - 42956162
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| |||| || | || |||||||||| || ||||| |||||||    
T  42956256 gcaaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaact 42956162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 175 - 283
Target Start/End: Complemental strand, 45331404 - 45331295
Alignment:
Q  175 acccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatg 273  Q
    ||||||||| ||||| |||||||  |||||| | |||||||||| |||||||||||||| ||||||||||| |||  |||||||||||||| |  | |||    
T  45331404 acccgtttggattggcttattttttagcttatgtaaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatg 45331305  T
Q  274 aagatacaat 283  Q
    ||||||||||    
T  45331304 aagatacaat 45331295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 51409395 - 51409460
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||    
T  51409395 agcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaa 51409460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 10448778 - 10448853
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaag 276  Q
    |||| ||||||||||| || ||||||||||||| |||||||||| || |||||||||||||||| |||| ||||||    
T  10448778 cttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaag 10448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 585029 - 585115
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||||||||||||| |||||||| |||||| |  |||||||||||||||||| |  | ||||||||||||| || |||||    
T  585029 gcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattttcgttag 585115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 3645305 - 3645402
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || ||||| ||||    
T  3645305 agcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttagtgaga 3645402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 5129892 - 5129834
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||    
T  5129892 gcaaataaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaaaa 5129834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 7292684 - 7292762
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||| ||||||| ||||||| |||||||||||||||||| |||||||  ||||||||||||||| |||| |||| ||||    
T  7292684 cttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaacagtttatgatgata 7292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 29614196 - 29614293
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || ||||| ||||    
T  29614196 agcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 29614293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 21296775 - 21296836
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatag 267  Q
    ||||||||||||| |||||| ||||||||||| | || ||||||||||||||||||||||||    
T  21296775 gcaaataaataagtttttatctattattcatacgtttatcaaggtagtttatgaaaaaatag 21296836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 23816240 - 23816172
Alignment:
Q  213 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 282  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||||| || | ||||||||||||    
T  23816240 aataagcttttat-tattattcataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaa 23816172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 28741298 - 28741197
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| |||||||||||  | ||||||||||| | |||||||||| || |||||||||||||||| || | |||||| |||||| || ||||| |||||    
T  28741298 agcttatgcaaataaatattcctttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatgaaggtacaattttcgttagtgagaa 28741199  T
Q  299 ct 300  Q
    ||    
T  28741198 ct 28741197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 32900812 - 32900732
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||| |||| || |||||||||||| |||||||||||| ||||| |||||||||| ||||||||||  | |||||||||    
T  32900812 agcttatgcaattatataagcttttatttattattcataaacttgttaaggtagtttgtgaaaaaataacttatgaagata 32900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 36182514 - 36182605
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-tagttaatgaagatacaatctttgttagcgagaa 298  Q
    ||||||||||| |||||| |||||||||||||||| || | ||||| |||||||||| ||| | ||||| ||| ||| ||||||||||||||    
T  36182514 aaataaataagtttttatttattattcataagcttttcgaagtagtatatgaaaaaactagcttatgaatatataatttttgttagcgagaa 36182605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 43971928 - 43971830
Alignment:
Q  202 ttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||| |||||||||||||||||| ||||||||| ||| |||| ||  |||||||||| |||| | || ||||||||| ||| || ||||| |||||||    
T  43971928 ttacgtaaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaact 43971830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 3876347 - 3876282
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| | |||||||| ||||||||| |||||||||||| || || |||||||||||||||||||    
T  3876347 agcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaa 3876282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 4257383 - 4257300
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg--aaaaaatagttaatgaagatacaat 283  Q
    |||| ||||||||||||| |||||||||||||| ||||| || | |||||||||||||  |||||| |||| |||||||||||||    
T  4257383 cttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaaaacagtttatgaagatacaat 4257300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 10272131 - 10272205
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 282  Q
    |||||||||||| |||||||||||||||||||||||  |||||| ||||| |||||||| || | |||| |||||||    
T  10272131 gcaaataaataaacttttatgtattattcataagct--tcaaggcagtttctgaaaaaacagcttatgaggatacaa 10272205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 37243493 - 37243550
Alignment:
Q  224 atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    |||||||||| |||||||||| || ||||||||||||||||||||| |||||| ||||    
T  37243493 atgtattatttataagcttgttaacgtagtttatgaaaaaatagtttatgaaggtaca 37243550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 47403839 - 47403762
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaat 283  Q
    |||||||||||| ||||| |||||||||||||  |||| || |||||||||| |||||||| || |||||||||||||    
T  47403839 caaataaataagtttttaggtattattcataaatttgtaaatgtagtttatgcaaaaaataatttatgaagatacaat 47403762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 48597975 - 48597850
Alignment:
Q  176 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatga 274  Q
    |||||||| ||||| |||||||  ||| || ||||||| |||| |||||||  |||||||||||| ||||| ||||||| |||||||||| |  | ||||    
T  48597975 cccgtttggattggcttattttttagcctatgcaaatacataaacttttataaattattcataagtttgtcgaggtagtgtatgaaaaaacaacttatga 48597876  T
Q  275 agatacaatctttgttagcgagaact 300  Q
    ||||||||| || || || |||||||    
T  48597875 agatacaattttcgtcagtgagaact 48597850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 20365491 - 20365427
Alignment:
Q  227 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 291  Q
    ||||||||||||||||||||| ||| |||||||||||  |||| ||||||||| ||| |||||||    
T  20365491 tattattcataagcttgtcaaagtactttatgaaaaagcagtttatgaagatataatttttgtta 20365427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 37456508 - 37456425
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||  |||||||||||||| ||||| || | ||| ||||||||||||||||| || || |||||||||| ||||||||    
T  37456508 aaataaataaatttttatgtattatttataagttttt-aagatagtttatgaaaaaataatttataaagatacaatttttgttag 37456425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 290
Target Start/End: Original strand, 4974313 - 4974404
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 290  Q
    |||||| ||||||||||||||  | |||||||||| |||| ||||  ||||||||||||||||||| |  | ||||| ||||||| ||||||    
T  4974313 agcttatgcaaataaataagcactaatgtattatttataaacttgctaaggtagtttatgaaaaaacaagttatgaatatacaatatttgtt 4974404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 20894505 - 20894602
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | || ||||||| |||||||| |||| ||||||||||||| || ||||| ||||    
T  20894505 agcttatgtaaataaataagtttttatgtattatttataatttttt-aatgtagtttttgaaaaaacagttcatgaagatacaattttcgttagtgaga 20894602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 30199048 - 30198982
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 257  Q
    |||||||||| ||| ||||||||||||| |||||||| ||||||||||| | || || |||||||||    
T  30199048 ttattttaagtttatgcaaataaataagtttttatgtgttattcataagttagtaaatgtagtttat 30198982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 30473220 - 30473162
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||| | || |||||||||| ||||| |||| |||||||||||||||||||    
T  30473220 gcaaataaataaacattaatgtattatttataaggttgttaaggtagtttatgaaaaaa 30473162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 37778182 - 37778236
Alignment:
Q  246 aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||||| | | ||||||||||||| |||||||| |||||||    
T  37778182 aaggtagtttatgaaaaaatcggttatgaagatacaatttttgttagtgagaact 37778236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 11528905 - 11528958
Alignment:
Q  211 taaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||||||||||||||||||  |||| || ||||||||||| ||||    
T  11528905 taaataagcttttatgtattattcataaatttgttaatgtagtttatgataaaa 11528958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 29002726 - 29002779
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||| |||||  |||||||||||||||||||||| ||| ||||||||||||    
T  29002726 aataaataaactttt--gtattattcataagcttgtcaaagtaatttatgaaaaaa 29002779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 36266253 - 36266309
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||||||||| ||||||||||||||| ||||| |||| |||||| |||| |||||    
T  36266253 gcaaataaataaacttttatgtattatttataagtttgttaaggtattttacgaaaa 36266309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 41601408 - 41601352
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||||||| || ||||||||||||||| |||| |||| ||| |||||||||||||    
T  41601408 gcaaataaatcagtttttatgtattattcttaagtttgttaagttagtttatgaaaa 41601352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 23555532 - 23555567
Alignment:
Q  327 atttatttgcataagctcaaaaataagtcaatacaa 362  Q
    ||||||||||||||||||||||||||| ||||||||    
T  23555532 atttatttgcataagctcaaaaataagccaatacaa 23555567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 24842189 - 24842126
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaaaa 263  Q
    |||| ||||||||||||  |||||||||||||||||||| ||||| || ||| |||||||||||    
T  24842189 cttatgcaaataaataaatttttatgtattattcataagtttgtcaaatgtaatttatgaaaaa 24842126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 25341291 - 25341348
Alignment:
Q  206 gcaaataaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaa 260  Q
    ||||||||||||||||| || |||||||   ||||||||||| |||||||||||||||    
T  25341291 gcaaataaataagctttcatttattattactcataagcttgttaaggtagtttatgaa 25341348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 27769801 - 27769762
Alignment:
Q  188 ggtttattttaagcttacgcaaataaataagcttttatgt 227  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  27769801 ggtttattttgagcttatgcaaataaataagcttttatgt 27769762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 37601120 - 37601053
Alignment:
Q  191 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 257  Q
    |||||||| |||||| |||||||||||| | || |||||||||| |||||||||| ||| ||||||||    
T  37601120 ttattttagagcttatgcaaataaataaacgttaatgtattatttataagcttgttaagatagtttat 37601053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 38524097 - 38524156
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaat 265  Q
    |||||||||||||  || |||||||||| ||||  |||| ||||||||||||||||||||    
T  38524097 gcaaataaataagtattaatgtattatttataaatttgttaaggtagtttatgaaaaaat 38524156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 51662814 - 51662873
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 266  Q
    |||||| |||| | || |||||||||| |||||||||| ||| |||||||||||||||||    
T  51662814 caaatagataaacattaatgtattatttataagcttgttaagatagtttatgaaaaaata 51662873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 27769650 - 27769711
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||| |||||||||| | ||||| | ||||||| ||||||||||||| |||||||||||||||    
T  27769650 cttatgcaaataaatgaactttt-tatattatttataagcttgtcaatgtagtttatgaaaaa 27769711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 29830847 - 29830793
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    ||||||||||||| |||||||||||||  ||| | |||| |||||||||||||||    
T  29830847 gcaaataaataagtttttatgtattatctatatgtttgttaaggtagtttatgaa 29830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 54547812 - 54547873
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 269  Q
    |||||||||||||||| |||||||||||||||  || |||| |||||||||||| | ||||||    
T  54547812 caaataaataagcttt-atgtattattcataattttatcaatgtagtttatgaacatatagtt 54547873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 1516173 - 1516081
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||| | ||||||||||||| ||||| |||| |||||| |||||| ||||  |||| || |||||||||| ||  |||| |||||||    
T  1516173 caaataaataa-catttatgtattatttataagtttgttaaggtattttatggaaaatcagtttataaagatacaattttcattagtgagaact 1516081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 15444002 - 15444043
Alignment:
Q  223 tatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||| |||||||| |||||||||| ||||||||    
T  15444002 tatgtattattcacaagcttgtaaaggtagtttctgaaaaaa 15444043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 405
Target Start/End: Complemental strand, 20685770 - 20685697
Alignment:
Q  332 tttgcataagctcaaaaataagtcaatacaatcagcctatagtttgtttgaattgacacatttgagcttatcta 405  Q
    |||||||||||||||||||||| ||||||||   ||||  ||||||||||  |||||  ||||||| |||||||    
T  20685770 tttgcataagctcaaaaataagccaatacaagtggccttaagtttgtttggcttgacttatttgagtttatcta 20685697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 16687150 - 16687087
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||||||||||||| || ||  | ||||||||||||||||||||| | ||||||||| |||||    
T  16687150 agcttacgcaaataaacaacctcat-tgtattattcataagcttgtctatgtagtttattaaaaa 16687087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 234
Target Start/End: Original strand, 23555493 - 23555521
Alignment:
Q  206 gcaaataaataagcttttatgtattattc 234  Q
    |||||||||||||||||||||||||||||    
T  23555493 gcaaataaataagcttttatgtattattc 23555521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 32901223 - 32901131
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||| ||||||||| ||  |||| ||| |||||||| | |||| |  | ||||||||| ||| || ||||| |||||||    
T  32901223 aaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcgttagtgagaact 32901131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 50502014 - 50502058
Alignment:
Q  190 tttattttaagcttacgcaaataaataagcttttatgtattattc 234  Q
    |||||||| |||||| |||||| ||| ||||||||||||||||||    
T  50502014 tttattttgagcttatgcaaattaatcagcttttatgtattattc 50502058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 6337849 - 6337739
Alignment:
Q  191 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgt 289  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||    
T  6337849 ttattttagagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgt 6337750  T
Q  290 tagcgagaact 300  Q
    |||||||||||    
T  6337749 tagcgagaact 6337739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 15515421 - 15515330
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || ||||| |||||||    
T  15515421 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaact 15515330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 48819296 - 48819402
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| | ||||||||     
T  48819296 ttttgagcttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagt 48819395  T
Q  294 gagaact 300  Q
    |||||||    
T  48819396 gagaact 48819402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 1005318 - 1005443
Alignment:
Q  176 cccgtttgtattggtttatttt-aagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-tagttaatg 273  Q
    |||||||| ||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || || |||    
T  1005318 cccgtttgaattggcttatttttaagcttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactactt-atg 1005416  T
Q  274 aagatacaatctttgttagcgagaact 300  Q
    |||||||||| |||| ||| |||||||    
T  1005417 aagatacaatttttgatagtgagaact 1005443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 4068124 - 4068218
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||| || || ||||| |||||||    
T  4068124 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactattttcgttagtgagaact 4068218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 31378840 - 31378742
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||| |||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||  ||| || |||||||||| ||||||||    
T  31378840 ttttaagcttatgcaaataaataagcttttatatattattaacaagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaatttttgttag 31378742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 179 - 283
Target Start/End: Complemental strand, 16889070 - 16888966
Alignment:
Q  179 gtttgtattggtttatt-ttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaaga 277  Q
    ||||| ||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | |||||||    
T  16889070 gtttggattggcttattgtttagcttgcgcaaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaaga 16888972  T
Q  278 tacaat 283  Q
    ||||||    
T  16888971 tacaat 16888966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 26988158 - 26988234
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  26988158 caaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 26988234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 37329489 - 37329395
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||| || ||| | |||||||    
T  37329489 gcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaact 37329395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 3069943 - 3069854
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| ||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  3069943 tttttagcttatacaaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 3069854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 297
Target Start/End: Complemental strand, 41196781 - 41196696
Alignment:
Q  212 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||| |||||||| ||||    
T  41196781 aaataagtttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 41196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 35590134 - 35590233
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| || | ||||||||||||| || || || |||||||    
T  35590134 cttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaacagcttatgaagatacaattttcgtcagtgagaact 35590233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 18327526 - 18327591
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  18327526 agcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaa 18327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 28690004 - 28690105
Alignment:
Q  199 agcttacgcaaataaata--agcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag 296  Q
    |||||| |||||||||||  || |||||||||||||||||||| |||||||||||||||||||| ||| || | ||||||||||||| ||| |||| |||    
T  28690004 agcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagtttatgaacaaacagcttatgaagatacaatttttattagtgag 28690103  T
Q  297 aa 298  Q
    ||    
T  28690104 aa 28690105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 5243487 - 5243404
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| ||||||||||||| |||| ||||||||| ||||| || | |||||||||||||||||||||||| |||||||||||||    
T  5243487 agcttatgcaaataaataagtttttgtgtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatacaat 5243404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 15791386 - 15791469
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| | ||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||| |||||||||||||||||    
T  15791386 agcttatgtaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaatcgttaatgaagatacaat 15791469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 37712077 - 37712152
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 282  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |  | ||||||||||||    
T  37712077 gcaaatgaataagcttttatgtat-attcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaa 37712152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 9572862 - 9572767
Alignment:
Q  206 gcaaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||| || ||||||||||||| |||| ||||||||||||||||||| | || ||||||||| | | |||||||| |||||||    
T  9572862 gcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaagtttttgttagtgagaact 9572767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 45267462 - 45267561
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| |||||| ||||||||||||||||||  |||||||| || ||||||||||||||||||||| |||||| || | ||||||||||||| || |||||    
T  45267462 ttttgagcttatgcaaataaataagctttttagtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattttcgttag 45267561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 46501076 - 46501001
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||| ||||||| ||||||||| ||||||||||||  ||||||||||||||||||| | |||||||||||||    
T  46501076 aaataaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaat 46501001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 10850148 - 10850090
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  10850148 gcaaataaataagcttttatgtattattcataaggttgtcaacgtagtttatggaaaaa 10850090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 13038956 - 13039014
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  13038956 gcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaa 13039014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 300
Target Start/End: Complemental strand, 22593492 - 22593390
Alignment:
Q  198 aagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||| || | |||||| ||||||  | || || |||||||||| |||||||| ||||    
T  22593492 aagcttatgcaaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgaga 22593393  T
Q  298 act 300  Q
    |||    
T  22593392 act 22593390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 32497355 - 32497258
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | ||||||||||||||||||| |||| |||| |||||||| || ||||| ||||    
T  32497355 agcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaacagtttatgaggatacaattttcgttagtgaga 32497258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 1565466 - 1565401
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| | ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  1565466 agcttatgtaaataaacaagcttttatgcattattcgtaagcttgtcaaggtagtttatgaaaaaa 1565401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 36423065 - 36423004
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  36423065 agcttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttatgaa 36423004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 26946180 - 26946104
Alignment:
Q  208 aaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||| |  | |||||||||||||    
T  26946180 aaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatacaat 26946104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 10082254 - 10082317
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  10082254 cttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaa 10082317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 28122618 - 28122685
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 266  Q
    |||||| |||||||||| ||||||||| |||||||||| ||||| | |||||||||||||||||||||    
T  28122618 agcttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaata 28122685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 17628500 - 17628411
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||  ||| ||||||||||||| || ||||| ||||    
T  17628500 caaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 17628411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 26435258 - 26435177
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    |||||| ||||||||||||| ||||||||||||||  |||| ||||||| ||||||||||||||||  ||| |||||||||||    
T  26435258 agcttatgcaaataaataag-ttttatgtattatttttaagtttgtcaaagtagtttatgaaaaaactgtttatgaagataca 26435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 39941450 - 39941508
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||| | |||||||||||||||||||||||||||||  |||||||||||||||    
T  39941450 gcaaataaatgaacttttatgtattattcataagcttgtcaaaatagtttatgaaaaaa 39941508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 42591396 - 42591466
Alignment:
Q  211 taaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    ||||||||||||||  ||||||| ||||| |||| |||||| ||||||||||||||||| |||||||||||    
T  42591396 taaataagcttttacatattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagataca 42591466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 10365180 - 10365237
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  10365180 gcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatgaaaaa 10365237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 26936856 - 26936920
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatga 259  Q
    |||| |||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  26936856 tttttagcttatgcaaataaataagcttctatgtat-actcataagcttgtcaaggtagtttatga 26936920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 51409799 - 51409730
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    ||||||| |||||| ||||||||||||| || ||||||||||||||||| |||| || ||||||||||||    
T  51409799 ttattttgagcttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttatgaa 51409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 20169266 - 20169350
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| |||||||||||||||||||||||||||| ||||| || | ||  ||||||||||||||| |||| || || |||||||    
T  20169266 agcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatacaat 20169350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 23544819 - 23544875
Alignment:
Q  225 tgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||| |||||    
T  23544819 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaataca 23544875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 35897705 - 35897646
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||| ||||||||||||| |||||| |||||||||||||||| |||| ||||||||||||    
T  35897705 cttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaa 35897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 41003391 - 41003454
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaaaa 263  Q
    |||| ||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  41003391 cttatgcaaataaataagtttttatgtattatttataagtttgtcaaaggtagtttatgaaaaa 41003454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 15631914 - 15632004
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||||||||| |||||||||||||| ||||| |||| || ||| ||||||||||||  ||| ||||| ||||||| || ||||| ||||    
T  15631914 caaataaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatgaaaatacaattttcgttagtgaga 15632004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 39941379 - 39941436
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||| || |||||||||||||||||||||||||||| |||| |||||||||||    
T  39941379 gcaaataaatgagtttttatgtattattcataagcttgtcaaagtag-ttatgaaaaaa 39941436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 39941519 - 39941577
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||| |  |||||||||||||||||||||||||||| |||||| |||||||||    
T  39941519 gcaaataaatgaatttttatgtattattcataagcttgtcaaagtagttaatgaaaaaa 39941577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 35282678 - 35282613
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||| ||||| ||||||| |||| | ||| |||||||||||||||||||    
T  35282678 agcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaa 35282613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 37148177 - 37148112
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||| || |||||||||| |||||  ||| |||||||||||||||||||    
T  37148177 agcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 37157002 - 37156937
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||| || |||||||||| |||||  ||| |||||||||||||||||||    
T  37157002 agcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 49971255 - 49971352
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||| |||||||||||  | ||||| ||||||| |||||||||| || |||||||||||||||| || | | ||||||||||| || ||||| |||||    
T  49971255 cttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaattttcgttagtgagaa 49971352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 51162271 - 51162336
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||| || |||||||||| | ||| |||| |||||||||||||||||||    
T  51162271 agcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaa 51162336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 391170 - 391225
Alignment:
Q  199 agcttacgcaaataaataagctttt-atgtattattcataagcttgtcaaggtagt 253  Q
    |||||| |||||||||||||||||| || ||||||||||||||||||||| |||||    
T  391170 agcttatgcaaataaataagctttttatatattattcataagcttgtcaatgtagt 391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 1265762 - 1265715
Alignment:
Q  214 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 261  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||    
T  1265762 ataagattttatgtattattcataattttgtcaaggtagtttatgaaa 1265715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 26542977 - 26543040
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||||||||| |||||||||||||||  ||||| |||| || ||||||||||||||||    
T  26542977 cttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaa 26543040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 47413385 - 47413454
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    ||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||| || || | |||||||||    
T  47413385 aataaatgagctttt-tgtattatttataagcttgtcaatgtagtttatgaaataacaggttatgaagata 47413454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 17814193 - 17814285
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||||||||   |||||||||||||| ||||| || | |||||||||||||||||||| | | ||||| ||||||| || |||||    
T  17814193 agcttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattttcgttag 17814285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 41129991 - 41130080
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| |||||| | ||||||| ||| ||||||||||||||||||||||| || |||| |||||||  |||| |  | |||||||||||||    
T  41129991 tttttagcttatgtaaataaaaaagtttttatgtattattcataagcttctctaggtggtttatgtcaaaacaacttatgaagatacaat 41130080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 1321545 - 1321608
Alignment:
Q  200 gcttacgcaaataaataagcttttatgtattattcataa-gcttgtcaaggtagtttatgaaaaa 263  Q
    ||||| ||||||||||||||||  ||||||||||||||| | ||||||||||||| |||||||||    
T  1321545 gcttatgcaaataaataagcttg-atgtattattcataaagtttgtcaaggtagtgtatgaaaaa 1321608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 5610531 - 5610587
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaag 276  Q
    |||||||||||||| |||||||| | || ||||||||| ||||||||||| ||||||    
T  5610531 ttttatgtattatttataagctttttaatgtagtttataaaaaaatagtttatgaag 5610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 13412534 - 13412439
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||| ||||||| ||||  |||||||||||||| ||||| || | |||||||||||||||||||   || ||||||||||||  |||||||| ||||    
T  13412534 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccattcatgaagatacaaattttgttagtgaga 13412439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 25485750 - 25485830
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||| ||||||||||||  |||||| | |||||||| | ||| | ||||||||||||||||||| | || |||||||||    
T  25485750 agcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagata 25485830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 39658379 - 39658323
Alignment:
Q  227 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||||||||| ||||||| |||||||||||| || | |||||| ||||||    
T  39658379 tattattcataagcttgccaaggtaatttatgaaaaaacagcttatgaaggtacaat 39658323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 46473105 - 46473161
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||||||| |||||||||| || || | |||||||| ||||||||||    
T  46473105 aaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaa 46473161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 8410129 - 8410211
Alignment:
Q  178 cgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||| | |||||||| ||| || ||||||||||||| |||||||||||||||||||| || | || ||||||||||||    
T  8410129 cgtttgaattagcttattttagagcctatgcaaataaataagtttttatgtattattcataag-tttttaaagtagtttatgaa 8410211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 9177771 - 9177732
Alignment:
Q  223 tatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  9177771 tatgtattattcataagcttgtcaacgtagtctatgaaaa 9177732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 19284907 - 19284993
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||||| |||||||||||| ||||| |||| ||| || |||||   |||||| |||| ||||||||||||| || |||||    
T  19284907 aaataaataagctattatgtattatttataagtttgttaagatattttataaaaaaaaacagtttatgaagatacaattttcgttag 19284993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 45267483 - 45267452
Alignment:
Q  327 atttatttgcataagctcaaaaataagtcaat 358  Q
    ||||||||||||||||||||||||||||||||    
T  45267483 atttatttgcataagctcaaaaataagtcaat 45267452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 5347159 - 5347240
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| |||||||||||   |||||||||||||| ||||| || | |||||||||||||||||||| | | ||||| |||||||    
T  5347159 cttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaat 5347240  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 3116145 - 3116053
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| ||||||||||||  |||||||| || || ||||| || | |||||||||||||||||||   || ||||||||||||| || |||||    
T  3116145 agcttatgcaaataaataaatttttatgttttgtttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttag 3116053  T

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Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 36259225 - 36259262
Alignment:
Q  188 ggtttattttaagcttacgcaaataaataagcttttat 225  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  36259225 ggtttattttgagcttatgcaaataaataagcttttat 36259262  T

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Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 50919497 - 50919573
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||| || |||| | ||||||| ||||| ||||||| ||||||||| |||||| || | |||||||||||||    
T  50919497 gcaaataaatgagttttt-tatattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaat 50919573  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 18317032 - 18317068
Alignment:
Q  228 attattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||| |||||||||||| |||||||||||    
T  18317032 attattcataagattgtcaaggtaggttatgaaaaaa 18317068  T

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Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 19220185 - 19220240
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||| |||||||||||||| || || || | |||||||||||||||||||    
T  19220185 aaataaataagtttttatgtattatttat-aggtttttaaggtagtttatgaaaaaa 19220240  T

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Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 36178533 - 36178580
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagctt 242  Q
    |||| |||||| ||||||||||||||||||| |||||||| ||||||||    
T  36178533 ttttgagcttatgcaaataaataagctttta-gtattattgataagctt 36178580  T

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Target: chr5 (Bit Score: 70; Significance: 3e-31; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 28625477 - 28625582
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || |||||     
T  28625477 tttttagcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagt 28625576  T
Q  294 gagaac 299  Q
    ||||||    
T  28625577 gagaac 28625582  T

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Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 12987096 - 12986997
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||| || |||||||| |||||||    
T  12987096 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccatttttgttagtgagaact 12986997  T

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Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 6144749 - 6144841
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| | ||||| ||||||| ||||||||||||||||    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaact 6144841  T

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Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 12467273 - 12467368
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||| ||||| |||||||| |||||||    
T  12467273 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagagacaatttttgttagtgagaact 12467368  T

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Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 41534632 - 41534709
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | |||||||||||||    
T  41534632 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaat 41534709  T

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Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 13060684 - 13060585
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||| ||| || || ||||| |||||||    
T  13060684 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttcgttagtgagaact 13060585  T

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Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 1473360 - 1473442
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| || | |||||||||||||    
T  1473360 cttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatacaat 1473442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 176 - 355
Target Start/End: Original strand, 42706774 - 42706958
Alignment:
Q  176 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaaaaatagttaat 272  Q
    |||||||| ||||| |||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||| || | ||    
T  42706774 cccgtttggattggcttatttttgagcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttataaaaaaaaacagcttat 42706873  T
Q  273 gaagatacaatctttgttagcgagaactgagaacgtatgaatta--aagaaaattaatttatttgcataagctcaaaaataagtc 355  Q
    ||||||||||| || || || || || ||| ||| |||||||||  |  |||| | |||||||| |||||||||  |||||||||    
T  42706874 gaagatacaattttcgtcagtgaaaagtgaaaacttatgaattaacattaaaacttatttattttcataagctcgtaaataagtc 42706958  T

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Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 11912176 - 11912085
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||| || | ||||||||||||| |||||||| |||||||    
T  11912176 aataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaact 11912085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 41059895 - 41059772
Alignment:
Q  178 cgtttgtattggttta-ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaag 276  Q
    |||||||||||| ||| |||| |||||| ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||  |  | ||||||    
T  41059895 cgtttgtattggcttactttttagcttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaag 41059796  T
Q  277 atacaatctttgttagcgagaact 300  Q
    || |||| || ||||| |||||||    
T  41059795 attcaattttcgttagtgagaact 41059772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 1868858 - 1868948
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 299  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |  | ||||||||||||| || ||||| ||||||    
T  1868858 aataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtgagaac 1868948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 22202020 - 22201917
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa----aaaatagttaatgaagatacaatctttgttagcg 294  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| || |  |||||||||||| || |||||||    
T  22202020 agcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaggaaaaaaaagcttgtgaagatacaattttcgttagcg 22201921  T
Q  295 agaa 298  Q
    ||||    
T  22201920 agaa 22201917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 10537303 - 10537238
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  10537303 agcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaa 10537238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 24030225 - 24030282
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24030225 caaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaa 24030282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 42852032 - 42852089
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42852032 caaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaa 42852089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 29922266 - 29922210
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29922266 gcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaa 29922210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 17657246 - 17657345
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |  | |||||||||| || || ||||| |||||||    
T  17657246 cttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaact 17657345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 31637165 - 31637094
Alignment:
Q  212 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || || | |||||||||||||    
T  31637165 aaataagcttttatgtattattcataagcttgtcaaggtaatttatgaaagaacagcttatgaagatacaat 31637094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 40452562 - 40452460
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatcttt-gttagcgaga 297  Q
    |||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||| || | ||||||||| ||| ||| ||||| ||||    
T  40452562 agcttatgcaaaggaataagcttttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgaga 40452463  T
Q  298 act 300  Q
    |||    
T  40452462 act 40452460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 1576633 - 1576733
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||| |  |  |||||||||||| |||||||| |||||    
T  1576633 agcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtgagaa 1576731  T
Q  299 ct 300  Q
    ||    
T  1576732 ct 1576733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 1608182 - 1608082
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||| |  |  |||||||||||| |||||||| |||||    
T  1608182 agcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtgagaa 1608084  T
Q  299 ct 300  Q
    ||    
T  1608083 ct 1608082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 2878760 - 2878668
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||||| || |||||||||| || |||| | ||||||||||| ||||||||    
T  2878760 agcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatacaatttttgttag 2878668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 41419531 - 41419604
Alignment:
Q  227 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || ||||| |||||||    
T  41419531 tattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaact 41419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 43268704 - 43268644
Alignment:
Q  200 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  43268704 gcttatgcaaataaataagcttttatgtattattaataagctggtcaaggtagtttatgaa 43268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 1942990 - 1943073
Alignment:
Q  178 cgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||||| |||||||  |||||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1942990 cgtttggattggcttatttttgagcttatgcaagtaaataagtttttatgtattatccataagcttgtcaaggtagtttatgaa 1943073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 3977484 - 3977547
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 269  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  3977484 gcaaataaataaacttttgtgcattattcataagcttgtcaaggtagtttatgaaaaaacagtt 3977547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 17128280 - 17128343
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  17128280 agcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaa 17128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 35536839 - 35536948
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcat---aagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 290  Q
    |||| |||||| ||||||| |||||||||||||| ||||||||   |||||||||||| ||||||||||||||| || | ||||||||||||| || |||    
T  35536839 tttttagcttatgcaaatacataagcttttatgtgttattcatcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgtt 35536938  T
Q  291 agcgagaact 300  Q
    |  |||||||    
T  35536939 actgagaact 35536948  T

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Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 7364386 - 7364292
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||| |||||||||| ||| |||||||||||||||||| |||||||||||| || ||| |  | ||||||||||||| |||||||| |||||||    
T  7364386 gcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagatacaatatttgttagtgagaact 7364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 40696998 - 40697064
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  40696998 ttttgagcttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaa 40697064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 208 - 297
Target Start/End: Original strand, 11991316 - 11991404
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||||||||||||||||||||||| |||||||||| ||  | |||||||||||||||||| ||||| ||||||| || ||||| ||||    
T  11991316 aaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaatagtt-atgaacatacaattttcgttagtgaga 11991404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 33757090 - 33757170
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 280  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | ||| ||||||||||||||| |||||||||||||||    
T  33757090 agcttatgcaaataaataagtttttatgtattatttataag-tttttaagctagtttatgaaaaaacagttaatgaagatac 33757170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 38461357 - 38461268
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||||||||| ||||||||||||| ||||| |||| || ||| |||||||||||| |||| ||||||||| ||| |||||||| ||||    
T  38461357 aaataaataagcctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagtgaga 38461268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 26003006 - 26003097
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||||||||| |||||||||||||| ||||| |||| ||| || ||||||||||| | ||| ||||||||||||| || ||||| ||||    
T  26003006 gcaaataaataagtttttatgtattatttataagtttgttaagttattttatgaaaaagtggtttatgaagatacaattttcgttagtgaga 26003097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 43319007 - 43319106
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| ||||||||||| |  ||||||||||||| |||||||||| || |||||||||||||||| |||| |||||| || ||| || ||||| |||||||    
T  43319007 cttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattttcgttagtgagaact 43319106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 15122549 - 15122630
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| ||||| ||||||| |||||||||||||| ||||| || | ||||||||||||||||||| |||| |||||||||||||    
T  15122549 cttatgcaaagaaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaat 15122630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 300
Target Start/End: Original strand, 28357353 - 28357455
Alignment:
Q  198 aagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||| ||||||||||| || | ||||||||||| ||||| |||| || |||||||||||||||| |||| |||||| | |||| || ||||| ||||    
T  28357353 aagcttatgcaaataaatatgcctatatgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgaga 28357452  T
Q  298 act 300  Q
    |||    
T  28357453 act 28357455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 13625605 - 13625540
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||  ||||||||||||| ||||    
T  13625605 agcttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaa 13625540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 2670084 - 2670140
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    ||||||||| || |||||||||| |||||||||| ||||||||||||||||||||||    
T  2670084 gcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatgaaaa 2670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 342001 - 342080
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatcttt 287  Q
    ||||||||||| |||||||||||||| | ||| ||| |||||||||||||||||||  || | |||||||||||| ||||    
T  342001 aaataaataagtttttatgtattatttacaagtttgccaaggtagtttatgaaaaatcagcttatgaagatacaagcttt 342080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 11163353 - 11163290
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||| | |||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  11163353 agcttatgtaaatcaataagtttttatgtatgattcataagcttgtcgaggtagtttatgaaaa 11163290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 36106821 - 36106758
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||||||| |||||||||| ||||||||  |||| |||||||||||||| ||||    
T  36106821 cttacgcaaataaataagtttttatgtatgattcataaatttgttaaggtagtttatgagaaaa 36106758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 43266018 - 43265967
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 257  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  43266018 gcaaataaataagcttttatgtatcattcataagcttgttaagatagtttat 43265967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 6125298 - 6125387
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||||||| |||||||||||||||||||| ||| | || ||| |||||| |||||||| | ||||| ||||||| |||||||| |||||    
T  6125298 aaataaataaacttttatgtattattcataatcttataaatgtattttatg-aaaaatagcttatgaatatacaatatttgttagtgagaa 6125387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 15709973 - 15709892
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| ||||||||||||| |||| ||||||||| ||||| || | ||| |||||||||||||||| ||||||| |||||||||    
T  15709973 cttatgcaaataaataagtttttctgtattatttataagtttttaaag-tagtttatgaaaaaatcgttaatgtagatacaat 15709892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 17868261 - 17868195
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattc-ataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||| ||||||||| |||||||||  |||||||||||||||||||||||| |||||    
T  17868261 agcttatgcaaataagtaagcttttgtgtattattttataagcttgtcaaggtagtttatggaaaaa 17868195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 28357132 - 28357244
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttat---gtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatcttt 287  Q
    ||||||| |||||| |||||||||| || |||| |   |||||||| | ||||||||||| |||||||||||||||| || | ||||||||||||| ||     
T  28357132 ttattttgagcttatgcaaataaatgagttttttttttgtattatttaaaagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttc 28357231  T
Q  288 gttagcgagaact 300  Q
    |||| ||| ||||    
T  28357232 gttaacgaaaact 28357244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 3520577 - 3520509
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaaga 277  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| || |||| || | |||||||    
T  3520577 aaataaataacctttta-gtattattcataagcttgtcaaggtagtttaggacaaaacagcttatgaaga 3520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 11706995 - 11706918
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||||||||||||||| |||| ||| |||||||| ||| |||||||| ||| |  | |||||||||||||    
T  11706995 gcaaataaataagcttttatgtatcattcctaaacttgtcaatgtattttatgaagaaacaacttatgaagatacaat 11706918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 33667476 - 33667396
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 280  Q
    |||||| ||||||||||||| |||||||||||||| | ||| || | |||||||||||||| ||||||||  ||||||||||    
T  33667476 agcttatgcaaataaataagtttttatgtattatttacaag-tttttaaggtagtttatgacaaaatagtatatgaagatac 33667396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 5559985 - 5559941
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  5559985 ttttatgtattcttcataagctcgtcaaggtagtttatgaaaaaa 5559941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 23087842 - 23087762
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||| |||||||||| ||  ||||||||||||||| |  | |||||| |||||| |||||||| |||||||    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaact 23087762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 18602618 - 18602669
Alignment:
Q  213 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||| |||||||||||||||||| ||||||| |||||||||||    
T  18602618 aataagtttttatttattattcataagcttgttaaggtagcttatgaaaaaa 18602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 29659055 - 29659163
Alignment:
Q  191 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgt 289  Q
    |||||||| |||||| ||||||||||| |  ||||||||||||| |||||||||| || |||||||| ||||||| |||| |||||  |||||| ||  |    
T  29659055 ttattttagagcttatgcaaataaatatg--tttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcat 29659152  T
Q  290 tagcgagaact 300  Q
    ||| |||||||    
T  29659153 tagtgagaact 29659163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 5203517 - 5203420
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| |||||||||||||  ||||||||||||| ||||  || | |||||||||||||| |||||  || ||||||||||||  |||||||| ||||    
T  5203517 agcttatgcaaataaataagtatttatgtattatttataaattttt-aaggtagtttatgagaaaatcatttatgaagatacaaattttgttagagaga 5203420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 7984109 - 7984191
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| |||||||| |||| |||||||||||||||||||| ||||||| || ||||  ||||||| |||| |  ||||||||||    
T  7984109 cttatgcaaataactaagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaat 7984191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 29418835 - 29418737
Alignment:
Q  200 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    ||||| ||||||||||| |  ||||||||||||| |||||| ||  || |||||||||||||||| | || |||||| |||||| || ||||| |||||    
T  29418835 gcttatgcaaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaa 29418737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 32508206 - 32508156
Alignment:
Q  216 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 266  Q
    |||||||||| ||| |||||||| ||||| |||||||||||||||||||||    
T  32508206 aagcttttatttatcattcataaacttgttaaggtagtttatgaaaaaata 32508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 6026061 - 6025977
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 291  Q
    ||||||||||| | |||||||||||||| ||||  |||| || ||||||||||||||||  ||| || |||||||||| |||||||    
T  6026061 gcaaataaatatg-ttttatgtattatttataattttgttaacgtagtttatgaaaaaacggtttataaagatacaatttttgtta 6025977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 6150400 - 6150437
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttat 257  Q
    |||||||||||||||||||| |||||||||||||||||    
T  6150400 ttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 15413994 - 15414087
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||||||||||  || |||||||||| ||||| |||| |||||||||||  |||||| |  | ||||| ||||||| ||||||||    
T  15413994 agcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttactaaaaaacaacttatgaatatacaatttttgttag 15414087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 27805910 - 27806010
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 290  Q
    ||||||| | |||| |||||||||| ||||||| | | ||||| ||| ||||||||| |||||||||||||||| |  | || |||||||||| ||||||    
T  27805910 ttattttgaccttatgcaaataaatgagctttttt-tgttatttatacgcttgtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgtt 27806008  T
Q  291 ag 292  Q
    ||    
T  27806009 ag 27806010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 4728848 - 4728923
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 275  Q
    |||||| ||||||||||||| |||||||||||||  | ||| || | ||||||||||||||||||| |||| |||||    
T  4728848 agcttatgcaaataaataagtttttatgtattatctacaag-tttttaaggtagtttatgaaaaaacagtttatgaa 4728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 28357306 - 28357254
Alignment:
Q  176 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgt 227  Q
    |||||||||||||| |||||||  |||||| ||||||||||||||||||||||    
T  28357306 cccgtttgtattggcttattttttagcttatgcaaataaataagcttttatgt 28357254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 1372068 - 1372013
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||||||  ||||||||||||||| |||||||||| || || ||||||||||||    
T  1372068 aaataaatacacttttatgtattatttataagcttgtaaatgtggtttatgaaaaa 1372013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 40152951 - 40152880
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    ||||||||||| |||||| |||||| |||||  |||| ||| ||||||||||||||| | || |||||||||    
T  40152951 aaataaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagata 40152880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 40697019 - 40696988
Alignment:
Q  327 atttatttgcataagctcaaaaataagtcaat 358  Q
    ||||||||||||||||||||||||||||||||    
T  40697019 atttatttgcataagctcaaaaataagtcaat 40696988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 42558794 - 42558740
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||||| ||| |||||||||| |||| || ||||||||||||||||    
T  42558794 aataaataagcttttacgtactattcataagtttgttaa-gtagtttatgaaaaaa 42558740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 275
Target Start/End: Original strand, 17668404 - 17668477
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 275  Q
    |||| ||||||||||| |  ||||||||||||| ||||| || | |||||||||||||||||||| ||| |||||    
T  17668404 cttatgcaaataaataggtgtttatgtattatttataagttttt-aaggtagtttatgaaaaaatcgtttatgaa 17668477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 32131394 - 32131332
Alignment:
Q  205 cgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatag 267  Q
    |||||||||||||| |||||| || |||| |||| ||||||||| ||||  ||||||||||||    
T  32131394 cgcaaataaataagtttttatttactatttataaacttgtcaagatagtgcatgaaaaaatag 32131332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 43010646 - 43010704
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 266  Q
    |||||||||| ||||||||||||||||||| | ||||||  ||||||||| | ||||||    
T  43010646 aaataaataaacttttatgtattattcatacgtttgtcattgtagtttataataaaata 43010704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 2577481 - 2577448
Alignment:
Q  231 attcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||||||||||| ||||||||||||    
T  2577481 attcataagcttgtcaaggtaatttatgaaaaaa 2577448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 3520452 - 3520481
Alignment:
Q  199 agcttacgcaaataaataagcttttatgta 228  Q
    ||||||||||||||||||||||||||||||    
T  3520452 agcttacgcaaataaataagcttttatgta 3520481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 7111060 - 7110981
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgt 289  Q
    ||||||||||||| | |||| ||||||||||||| |||||||   |||||||| ||||| || | ||||||||||||| |||||    
T  7111060 gcaaataaataagttcttatttattattcataagattgtcaa---agtttatg-aaaaacagcttatgaagatacaatttttgt 7110981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 14243825 - 14243890
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| | |||||||||||||| |||||| |||||||||| |  | ||||||||||||| |||||    
T  14243825 agcttatgtaaataaataagcttctatgtaatattcataagttgtttaaggtagtttatggaaaaa 14243890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 22573657 - 22573718
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||| |||||||||| || |||| ||||||||| ||||| |||| || ||||||||||||||    
T  22573657 cttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttatgaaaa 22573718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 25332322 - 25332261
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| |||||||||||||| || || ||||||| ||||| |||| |||||| ||||||||    
T  25332322 agcttatgcaaataaataagcattaatatattatttataagtttgttaaggtaatttatgaa 25332261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 29658115 - 29658074
Alignment:
Q  222 ttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||||||||||||||| |||| || |||||||||||||||    
T  29658115 ttatgtattattcataagtttgtaaatgtagtttatgaaaaa 29658074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 30852180 - 30852237
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||||||||| ||||||||||||||| ||||| | || || ||||||||| |||||    
T  30852180 gcaaataaataaacttttatgtattattaataagttcgtaaatgtagtttataaaaaa 30852237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 33803870 - 33803814
Alignment:
Q  206 gcaaataaataagcttttatgtattat--tcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| |||||||||||||||| |||  ||||||  ||||||||||||||||||||    
T  33803870 gcaaatcaataagcttttatgtactatattcataaatttgtcaaggtagtttatgaa 33803814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 264
Target Start/End: Complemental strand, 39154809 - 39154780
Alignment:
Q  235 ataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||||||||||||||||||||    
T  39154809 ataagcttgtcaaggtagtttatgaaaaaa 39154780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 28074368 - 28074467
Alignment:
Q  200 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 299  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || |||||||| |||    
T  28074368 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgttagcgaaaac 28074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 7148743 - 7148839
Alignment:
Q  169 tataagacccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||| ||||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7148743 tataaggcccgtttggattggcttatttttgagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaa 7148839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 23297440 - 23297538
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |   | | ||||||||||||| ||||||||||||||    
T  23297440 agcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatgaaaca---gcttatgaagatacaatttttgttagcgagaa 23297536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 29877648 - 29877742
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  || | ||||||||||||| |||||||| |||||||    
T  29877648 gcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagatacaatttttgttagtgagaact 29877742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 12495730 - 12495627
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtc--aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag 296  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| || |||| |||||||||| ||  |||| |||    
T  12495730 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcattagtgag 12495631  T
Q  297 aact 300  Q
    ||||    
T  12495630 aact 12495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 488473 - 488367
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||| |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| | |  | |||||||||| ||| ||||     
T  488473 ttttgagcttatgcaaataagtaagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaatttttattagt 488374  T
Q  294 gagaact 300  Q
    |||||||    
T  488373 gagaact 488367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 194 - 300
Target Start/End: Original strand, 36740901 - 36741007
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||| |||||| |||||||||||||||||||| |||||| |||||||||||||| |||||||||||||| | |||| ||||||||||||| ||  ||||     
T  36740901 ttttgagcttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagt 36741000  T
Q  294 gagaact 300  Q
    |||||||    
T  36741001 gagaact 36741007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 35124389 - 35124482
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||  ||||||||    
T  35124389 agcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaaattttgttag 35124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 48591508 - 48591407
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| || | ||||||||||||| || ||||  |||||    
T  48591508 agcttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaa 48591409  T
Q  299 ct 300  Q
    ||    
T  48591408 ct 48591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 191 - 300
Target Start/End: Complemental strand, 55638173 - 55638064
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 290  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||| |||| ||  ||||||||||||||| |||| || ||||||||||||  |||    
T  55638173 ttattttaagtttatgcaaataaacaagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgtt 55638074  T
Q  291 agcgagaact 300  Q
    || |||||||    
T  55638073 agtgagaact 55638064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 896965 - 897037
Alignment:
Q  192 tattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  896965 tattttgagcttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaa 897037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 52274209 - 52274103
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||| |||||| |||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||| || | ||||||||||||| || || ||     
T  52274209 ttttgagcttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagt 52274110  T
Q  294 gagaact 300  Q
    |||||||    
T  52274109 gagaact 52274103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 17222852 - 17222924
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || |||||    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttag 17222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 18424353 - 18424270
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 291  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| | || ||||||||||||| |||||||    
T  18424353 caaataaataagcttttatgtattattcataaacttgtgaaggtagtttatga-aaaacaatttatgaagatacaatttttgtta 18424270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 23335644 - 23335728
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| |||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||| || | |||||||||||||    
T  23335644 agcttatgcaaataaatgagattttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaat 23335728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 825679 - 825777
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| |||||| |||||||||||||||||| | |||||||||||||| |||| || ||||||||||||||| || | ||||||||||| | ||||||||    
T  825679 ttttgagcttatgcaaataaataagcttttctatattattcataagcctgtctagttagtttatgaaaaaacagctcatgaagatacattttttgttag 825777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 948074 - 948176
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || | || |||||||||| ||||| || ||||    
T  948074 agcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaaaaaacagcttataaagatacaatttttgtcagagaga 948173  T
Q  298 act 300  Q
    |||    
T  948174 act 948176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 27368234 - 27368152
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||||| |||| || ||||||||||    
T  27368234 cttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagatacaat 27368152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 39932843 - 39932737
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||||| |||| |||||||||||| ||||||||||||||| ||||| |||| |||||||| |||||||||| | || ||||||||||||| | | ||||     
T  39932843 ttttaaacttatgcaaataaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaatttctattagt 39932744  T
Q  294 gagaact 300  Q
    |||||||    
T  39932743 gagaact 39932737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 8601195 - 8601296
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 290  Q
    ||||||| |||||| |||||||||| ||||||| | ||||||| |||||| |||||| ||||||||||||||||  | | ||||||||||||| ||||||    
T  8601195 ttattttgagcttatgcaaataaatgagcttttttctattatttataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgtt 8601294  T
Q  291 ag 292  Q
    ||    
T  8601295 ag 8601296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 38345897 - 38345805
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |  | ||||||||||||| ||| ||||| ||||||    
T  38345897 caaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagatacaatttttattagccagaact 38345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 43699559 - 43699502
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  43699559 caaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaaaa 43699502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 2494475 - 2494403
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 280  Q
    ||||| |||||||||||  ||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  2494475 aaatagataagcttttacatattatttataagcttgtaaaggtagtttatgaaaaaatagtttatgaagatac 2494403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 46176062 - 46175979
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| ||||||||||||| |||||||||||||| ||||  || | |||||||||||||||||||||||| |||||||||||||    
T  46176062 agcttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagtttatgaaaaaatagtttatgaagatacaat 46175979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 21216391 - 21216328
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| ||||||    
T  21216391 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaagtaggttatgaagctacaat 21216328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 8057165 - 8057071
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||| ||| |||||||   || ||||||||||||| |||||| | |||||||    
T  8057165 gcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaagatacaatatttgttcgtgagaact 8057071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 35010222 - 35010296
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 282  Q
    ||||||||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||||||| || |||||||||    
T  35010222 aaataaataagtttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaa 35010296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 3564222 - 3564286
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||| | |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  3564222 agcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaaaa 3564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 4603413 - 4603318
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||| ||||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || ||||| ||||    
T  4603413 cttatgcaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 4603318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 41228917 - 41228989
Alignment:
Q  211 taaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |  | |||||||||||||    
T  41228917 taaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagatacaat 41228989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 52700619 - 52700547
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 280  Q
    |||||||||||  ||||||||||||| |||||||||| || || |||||||||||||||||| ||||||||||    
T  52700619 aaataaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatagtttatgaagatac 52700547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 213029 - 212967
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  213029 cttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttatgaaaaaa 212967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 2141620 - 2141727
Alignment:
Q  177 ccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 275  Q
    ||||||| ||| | |||||||| |||||| |||||||||||||||||||||| ||||| ||||  |||| ||||||  |||| |||||| |||| |||||    
T  2141620 ccgtttgaattagcttattttagagcttatgcaaataaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagtttatgaa 2141719  T
Q  276 gatacaat 283  Q
    ||||||||    
T  2141720 gatacaat 2141727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 46650280 - 46650371
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||||||||||||| |||||||||||||||  |||| |  ||||||||||||||||||||| || |||| ||||| || ||||| ||||    
T  46650280 gcaaataaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattttcgttagtgaga 46650371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 46704340 - 46704253
Alignment:
Q  213 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||| || | ||||||||| ||| ||  |||| |||||||    
T  46704340 aataagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaaattttcattagtgagaact 46704253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 4331350 - 4331404
Alignment:
Q  210 ataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  4331350 ataaataagcttttatttattattcataactttgtcaaggtagtttatgaaaaaa 4331404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 29615352 - 29615438
Alignment:
Q  176 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 261  Q
    |||||||| |||||||||||||  || ||| | |||||||||||||| ||||||||||||||||||||||   ||||||||||||||    
T  29615352 cccgtttgaattggtttattttcgagtttatgtaaataaataagcttatatgtattattcataagcttgtagtggtagtttatgaaa 29615438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 43415366 - 43415280
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||||| |||||||||||||||||||| |||| || |||||||| ||||||| | || || |||||| ||| ||||||||    
T  43415366 gcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttatcaagatataatatttgttag 43415280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 2405205 - 2405273
Alignment:
Q  214 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| | ||| |||||||||    
T  2405205 ataagctattatgtattatt-ataagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaat 2405273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 8130490 - 8130551
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||| ||||| |||||||    
T  8130490 agcttatgcaaataaataagcttttatgcattattcataagtttgtcagggtagcttatgaa 8130551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 15184549 - 15184649
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | ||| ||||||||||||||| |||| ||||||||||||| || ||||| |||||    
T  15184549 agcttatgtaaataaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagaa 15184647  T
Q  299 ct 300  Q
    ||    
T  15184648 ct 15184649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 42611950 - 42611870
Alignment:
Q  201 cttacgcaaataaataagcttt-tatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |  | |||||||||||    
T  42611950 cttatgcaaataaataagctttatatgtattattcataagcttgtcga-gtagtttatgaaaaaacaacttatgaagataca 42611870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 48686956 - 48687009
Alignment:
Q  204 acgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 257  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  48686956 acgcaaataaataagtttttatgtactattcataagcttgtcaacgtagtttat 48687009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 42617313 - 42617234
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||| ||||||||||| | ||||| |||||||| ||||| || | |||||||||||||||||||||||| |||||||||    
T  42617313 agcttatgcaaataaatacgtttttaagtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagata 42617234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 1374445 - 1374382
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||||||| ||| ||||||| || |||||||||||||||| |||||||||||||||||    
T  1374445 cttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagtttatgaaaaaa 1374382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 10794984 - 10794910
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||| |||||||||||||| | ||||| || ||||| |||||||| ||||||||| |||||||||||||    
T  10794984 aaataaataagtttttatgtattatttaaaagctcgttaaggtggtttatga-aaaatagtttatgaagatacaat 10794910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 32628793 - 32628864
Alignment:
Q  212 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||| ||| ||||||||||||||||| ||||| |||||||||||| || |  ||||||||||||    
T  32628793 aaataagcttttttgtgttattcataagcttgtcgaggtaatttatgaaaaaacagcttgtgaagatacaat 32628864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 29997375 - 29997329
Alignment:
Q  218 gcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29997375 gcttttatatattattcataagcttatcaaggtagtttatgaaaaaa 29997329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 30956692 - 30956750
Alignment:
Q  207 caaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||||    
T  30956692 caaataaataagctttttatgtattactcacaagcttctcaaggtagtttatgaaaaaa 30956750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 7206670 - 7206605
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||| ||||||||||||| |||||||||  ||| ||| |||||||||||||||||||    
T  7206670 agcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaa 7206605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 28663606 - 28663659
Alignment:
Q  230 tattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||||||||||||||||||||||||||| || |  ||||||||||||    
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaat 28663659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 40699358 - 40699423
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||||||||  ||||||||| |   |||||||||||||||||||||||||||||||    
T  40699358 agcttatgcaaataaataaatttttatgtagtgcgcataagcttgtcaaggtagtttatgaaaaaa 40699423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 43983482 - 43983401
Alignment:
Q  184 tattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||| ||||||  ||||||||||||| || |||||||||| |||||||||| ||| |||||||| ||||||    
T  43983482 tattggcttattttagagcttatacaaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaa 43983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 19725295 - 19725375
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||| |||| |||||| | |||||||||||||| ||||| |||| |||||| |||||||||||| |||  |||||||||    
T  19725295 agcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtctatgaagata 19725375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 10796397 - 10796471
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||| |||||||||||||| | ||||| || ||| | ||||||| |||||||||| |||||||||||||    
T  10796397 aaataaataagtttttatgtattatttaaaagctcgttaagatggtttatg-aaaaatagtttatgaagatacaat 10796471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 18630961 - 18630878
Alignment:
Q  217 agcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||| |||||| ||| ||||||| ||||||||||||||||||| || | ||||||||| | | || ||||| |||||||    
T  18630961 agcttttatttattatccatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaact 18630878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 36255094 - 36255019
Alignment:
Q  225 tgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||| |||||||||||||||| ||||||| |||||||| || | ||||||||||||| ||  |||| |||||||    
T  36255094 tgtattgttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgagaact 36255019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 47202828 - 47202925
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| ||||||||||||| |||||||||||| | ||||  || | |||||||||||||||||||   || ||||||||||||| || ||||| ||||    
T  47202828 agcttatgcaaataaataagtttttatgtattacttataa-atttttaaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgaga 47202925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 11298595 - 11298656
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| |||| ||| ||||||||||| |||||||||| ||||| | |||||||||||||||    
T  11298595 agcttatgcaagtaattaagcttttatttattattcatgagcttcttaaggtagtttatgaa 11298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 26206431 - 26206362
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 275  Q
    ||||||||||| |  ||||||||||||| ||||| |||| || |||||||||||||||| |||| |||||    
T  26206431 gcaaataaatatgtctttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaa 26206362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 34633536 - 34633503
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgt 227  Q
    ||||||||||||||||||||||||||||||||||    
T  34633536 ttttaagcttacgcaaataaataagcttttatgt 34633503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 2548131 - 2548051
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||| ||||||||||||| |||||| | |||||||| ||| | | ||| ||||||||||||||| | || |||||||||    
T  2548131 agcttatgcaaataaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagata 2548051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 22273830 - 22273881
Alignment:
Q  247 aggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||||||||||||||| || | ||||||||||||| |||||||| |||||    
T  22273830 aggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaa 22273881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 22397411 - 22397324
Alignment:
Q  178 cgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||| ||||||||| ||||||  |||||||||||   || |||||||||| |||||  ||| |||||||||||||||||||    
T  22397411 cgtttgaattgatttattttagagcttatacaaataaataaatattaatgtattatttataagtctgttaaggtagtttatgaaaaaa 22397324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 28663446 - 28663415
Alignment:
Q  327 atttatttgcataagctcaaaaataagtcaat 358  Q
    ||||||||||||||||||||||||||||||||    
T  28663446 atttatttgcataagctcaaaaataagtcaat 28663415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 33533932 - 33533995
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||||  ||||||||  | |||||||||||||| | ||||||||||||||||||||||    
T  33533932 cttatgcaaatttataagcttcaaggtattattcataagttagtcaaggtagtttatgaaaaaa 33533995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 36740922 - 36740891
Alignment:
Q  327 atttatttgcataagctcaaaaataagtcaat 358  Q
    ||||||||||||||||||||||||||||||||    
T  36740922 atttatttgcataagctcaaaaataagtcaat 36740891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 43740150 - 43740076
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||| |||||  |||||||||||| |||||| | ||| ||||||| |||| |||| |||||||||||||    
T  43740150 aaataaataagtttttacatattattcataaacttgtctaagtaatttatga-aaaacagtttatgaagatacaat 43740076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 45018548 - 45018619
Alignment:
Q  212 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||| |||||| |||||||||| || |||| || |||||||||||||||| |  | |||||||||||||    
T  45018548 aaataagattttatttattattcatgagattgttaaagtagtttatgaaaaaacaacttatgaagatacaat 45018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 29996716 - 29996678
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgt 244  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  29996716 gcaaataaataagcttttatatattattcataagtttgt 29996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 488454 - 488483
Alignment:
Q  329 ttatttgcataagctcaaaaataagtcaat 358  Q
    ||||||||||||||||||||||||||||||    
T  488454 ttatttgcataagctcaaaaataagtcaat 488483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 278
Target Start/End: Original strand, 9201655 - 9201731
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagat 278  Q
    |||| ||||||||||||| |||||||||||||| ||||| || ||||| || |||||| ||||| || | ||||||||    
T  9201655 cttatgcaaataaataagtttttatgtattatttataag-ttttcaagctattttatggaaaaacaggttatgaagat 9201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 15179820 - 15179912
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||||||||   |||||||||||||| ||||| || | ||||||||||||||| |||| | | ||||| ||||||| || |||||    
T  15179820 agcttatgcaaataaatatatttttatgtattatttataag-tttttaaggtagtttatgaagaaatggattatgaaaatacaattttcgttag 15179912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 38515726 - 38515689
Alignment:
Q  209 aataaataagcttttatgtattattcataagcttgtca 246  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  38515726 aataaataagcctctatgtattattcataagcttgtca 38515689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 22117358 - 22117421
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaat 265  Q
    |||| |||||||||||   |||||||||||||| ||||| || | ||||||||||||||||||||    
T  22117358 cttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaat 22117421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 42153245 - 42153193
Alignment:
Q  229 ttattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    ||||||| |||||||||| ||||||||||| |||||||| |  ||||||||||    
T  42153245 ttattcagaagcttgtcatggtagtttatgtaaaaatagcttctgaagataca 42153193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 4026929 - 4027028
Alignment:
Q  200 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 299  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||| |||||||| ||||||    
T  4026929 gcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaac 4027027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 33321389 - 33321298
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||||| ||||    
T  33321389 gcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 33321298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 13056404 - 13056310
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| | |||||||| |||| || |||| ||||||||    
T  13056404 gcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagcttatgaagatgcaattttcgttaacgagaact 13056310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 25836796 - 25836731
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25836796 agcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 25836731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 755824 - 755724
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa-aaaatagttaatgaagatacaatctttgttagcgagaac 299  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||| |||| || | ||||||||||||| |||||||| ||||||    
T  755824 cttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaaaaaacagcttatgaagatacaatttttgttagtgagaac 755725  T
Q  300 t 300  Q
    |    
T  755724 t 755724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 887393 - 887515
Alignment:
Q  179 gtttgtattggtttattt-taagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaaga 277  Q
    ||||| ||||| |||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||   | | |||||||    
T  887393 gtttggattggattatttctgagcttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaaga 887492  T
Q  278 tacaatctttgttagcgagaact 300  Q
    |||||| ||  ||||| ||||||    
T  887493 tacaattttcattagcaagaact 887515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 12223849 - 12223935
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 280  Q
    ||||||||||  |||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  12223849 ttttaagcttttgcaaataagtaacctttcatgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagatac 12223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 11776986 - 11777087
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||| | || | ||||||||||| | |||||||| |||||    
T  11776986 agcttatgcatataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgagaa 11777085  T
Q  299 ct 300  Q
    ||    
T  11777086 ct 11777087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 38216025 - 38216122
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| ||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||| || ||||| |||||    
T  38216025 agcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagtttaggaaaaaatagcatatgaagatacaattttcgttagtgagaa 38216120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 4090491 - 4090592
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||  ||||||||| || | | ||||||||||| || |||| ||||||    
T  4090491 agcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagtcaatgaaaaaacagcttacgaagatacaattttcgttaccgagaa 4090590  T
Q  299 ct 300  Q
    ||    
T  4090591 ct 4090592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 34913474 - 34913409
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  34913474 agcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaa 34913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 36501583 - 36501498
Alignment:
Q  215 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||| |  ||||| |||||||    
T  36501583 taagtttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaact 36501498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 12238582 - 12238502
Alignment:
Q  185 attggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||| |||||||| |||||| |||||||||||||| || |||||||||| |||||||||| |||||||||||||||||||    
T  12238582 attggcttattttagagcttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaaaa 12238502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 21788461 - 21788557
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |  | ||||||||| ||| || ||||| ||||    
T  21788461 cttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattttcgttagtgaga 21788557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 33321485 - 33321422
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  33321485 cttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagtttatgaaaaaa 33321422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 2790155 - 2790070
Alignment:
Q  199 agcttacgcaaataaataa-gcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| |||||||||||| ||||||||| |||||| ||||||||||||||||| |||||||| ||| || | |||||||||||||    
T  2790155 agcttatgcaaataaataaagcttttatgcattattgataagcttgtcaaggtattttatgaataaacagcttatgaagatacaat 2790070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 735991 - 736067
Alignment:
Q  224 atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||| ||| |||||||  |||||||    
T  735991 atgtattatttataagcttgttaaggtggtttatgaaaaaatagtttatgaagatataatttttgttattgagaact 736067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 29774749 - 29774848
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| |||||||||||| |||||||| ||||||||| || |||| |||||||||||||||||||  | | ||||| ||||||| || ||||| |||||||    
T  29774749 cttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaattttcgttagtgagaact 29774848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 11072955 - 11073013
Alignment:
Q  207 caaataaataagcttttatgtatt-attcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11072955 caaacaaataagcttttttgtattcattcataagcttgtcaaggtagtttatgaaaaaa 11073013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 12442831 - 12442897
Alignment:
Q  215 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||  || | |||||||||||    
T  12442831 taagcttttaggtattattcataagcttgtcaagatagtttatgaaaaagcagcttatgaagataca 12442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 37409647 - 37409737
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 291  Q
    |||| ||||||||||||||||||| |||||||||   || ||||||| |||||||||||||||| | || ||||| ||||||| |||||||    
T  37409647 cttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaatacaatttttgtta 37409737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 32522129 - 32522037
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || |||||    
T  32522129 agcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttag 32522037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 38471875 - 38471774
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| ||||||||||| |||||||||| ||||  |||||||| |  | |||||||||||||||| |||| |||||| |||||| || ||||| |||||    
T  38471875 agcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaa 38471776  T
Q  299 ct 300  Q
    ||    
T  38471775 ct 38471774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 42839418 - 42839341
Alignment:
Q  186 ttggtttatt-ttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||||||| || |||||| | | ||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  42839418 ttggtttattattgagcttatgtagataaataagtttttatgtattattcataagtttgtcaagttagtttatgaaaa 42839341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 297
Target Start/End: Original strand, 5903537 - 5903633
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||| ||||||||| |||| ||  ||||||| ||||||||||||||| |||||| ||||||||| |  | ||||||||||||| |||||||| ||||    
T  5903537 cttatgcaaataaacaagcattagtgtattactcataagcttgtcaaagtagttaatgaaaaaacatcttatgaagatacaatttttgttagtgaga 5903633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 8832464 - 8832522
Alignment:
Q  207 caaataaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||    
T  8832464 caaataaataagcttttatgtattattaatcataagcttttcaaggtagtttatgaaaa 8832522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 9140806 - 9140735
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagat 278  Q
    |||||||||||| ||||||||||||| |||||| |||||||| |||||||||| ||||| |||| ||||||||    
T  9140806 gcaaataaataaccttttatgtatta-tcataaacttgtcaatgtagtttatgtaaaaacagtttatgaagat 9140735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 43787879 - 43787803
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||| |||||||||||||||||||| |||||  |||||| ||||||||||| |  | |||||||||||||    
T  43787879 caaataaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaat 43787803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 4004823 - 4004922
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| |||||||||||| |||||||||| ||||||||||||| | || |||||||||||||| | |  | |||||| |||||| || ||||| |||||||    
T  4004823 cttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaact 4004922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 32366154 - 32366232
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 280  Q
    |||| ||||||||||||| |||||||||||||| ||||| || | ||||||||||||||||||| |||| ||||| ||||    
T  32366154 cttatgcaaataaataagtttttatgtattatttataag-ttttaaaggtagtttatgaaaaaacagtttatgaatatac 32366232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 39592271 - 39592314
Alignment:
Q  219 cttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  39592271 cttttatgcattattcataagcttgtcaaggtagtttatgaaaa 39592314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 12683683 - 12683589
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||||| ||| |||||||||||||||||||||||  | | |||| ||||||| || | ||||||||||||| || ||||  |||||||    
T  12683683 gcaaataaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaaaacagcttatgaagatacaattttggttactgagaact 12683589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 29133744 - 29133667
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||| ||||||||||||||||||||| ||||||  || |||| || ||||| |||| || ||||||||||    
T  29133744 gcaaataaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataaagatacaat 29133667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 8343062 - 8342991
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||||||||||| ||||||||||||| ||| |||||| ||||||| || ||||||||||||| || |||||    
T  8343062 ttttatgtattatt-ataagcttgtcaatgtattttatgcaaaaataatttatgaagatacaattttcgttag 8342991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 12267020 - 12267092
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| ||||||||| ||||||||||| | ||||||||||||||||||| | ||||||||| ||| ||| ||||    
T  12267020 ttttttgtattatttataagcttgtcgatgtagtttatgaaaaaataggttatgaagatataatttttattag 12267092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 43796910 - 43796993
Alignment:
Q  178 cgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||||| |||||||| |||||| | |||||||||||  || |||||||||| ||||| |||| |||||||||||||||    
T  43796910 cgtttggattggcttattttagagcttatgtaaataaataagtattaatgtattatttataagtttgttaaggtagtttatgaa 43796993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 27703542 - 27703500
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagct 241  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  27703542 agcttatgcaaataaataagcttttatatattattcataagct 27703500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 37420040 - 37419987
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||||||||||||||||||| | ||||||||  ||||||||||||||||||||    
T  37420040 gcaaataaataagcttttatgt-taattcataattttgtcaaggtagtttatgaa 37419987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 41554656 - 41554602
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 261  Q
    ||||||||||| ||||||||||||||||||||  |||| || |||||||||||||    
T  41554656 caaataaataaacttttatgtattattcataaatttgttaaagtagtttatgaaa 41554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 2401705 - 2401613
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||||||||   ||||||||||| || ||||| || | |||||||||||||||||||| | | ||||| ||||||| ||||||||    
T  2401705 agcttatgcaaataaatatatttttatgtattgtttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaatttttgttag 2401613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 5516077 - 5516142
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| | ||| |||||||||| ||||| ||||||||||| |||| || ||||||||||||||||    
T  5516077 agcttatgtaaaaaaataagcttctatgtgttattcataagtttgtaaatgtagtttatgaaaaaa 5516142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 7028152 - 7028229
Alignment:
Q  176 cccgtttgtattggttta-ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtag 252  Q
    ||||||||||||| |||| |||| |||||| ||||||||| || ||||||| ||||| ||||||| ||||||| ||||    
T  7028152 cccgtttgtattgttttatttttgagcttatgcaaataaacaaacttttatatattactcataagtttgtcaatgtag 7028229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 8441475 - 8441536
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||||||||||| | |||||||||||||| ||||| |||| || ||||||||||||    
T  8441475 agcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaa 8441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 35731148 - 35731189
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaag 248  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  35731148 caaataaataagcttttatgtattattcatgagtttgtcaag 35731189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 40301354 - 40301414
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | |||||||||||||||    
T  40301354 agcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaa 40301414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 42382621 - 42382670
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagttt 255  Q
    ||||||||||||| || || |||||||||||||| |||||||||||||||    
T  42382621 gcaaataaataagtttgtacgtattattcataagtttgtcaaggtagttt 42382670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 7041373 - 7041449
Alignment:
Q  177 ccgtttgtattggttta-ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtag 252  Q
    |||||||||||| |||| |||| |||||| ||||||||| || ||||||| ||||| ||||||| ||||||| ||||    
T  7041373 ccgtttgtattgttttatttttgagcttatgcaaataaacaaacttttatatattactcataagtttgtcaatgtag 7041449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 15155824 - 15155880
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||| |||||||||||||||| |||| ||||| || | ||||||||||||||    
T  15155824 aaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaa 15155880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 42064881 - 42064933
Alignment:
Q  227 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||||||||||||||| |||||||||||| ||||||||  | |||||||||    
T  42064881 tattattcataagcttgttaaggtagtttataaaaaaataacttatgaagata 42064933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 17531951 - 17532013
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||| ||||||||||||| |||||||||||||  ||||| || | |||||||||||||||||    
T  17531951 agcttatgcaaataaataagtttttatgtattatctataag-tttttaaggtagtttatgaaaa 17532013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 358
Target Start/End: Complemental strand, 18276949 - 18276918
Alignment:
Q  327 atttatttgcataagctcaaaaataagtcaat 358  Q
    ||||||||||||||||||||||||||||||||    
T  18276949 atttatttgcataagctcaaaaataagtcaat 18276918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 22422245 - 22422183
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 269  Q
    ||||||||||||| |||||| ||||||| ||||| || | ||||||||||||||||||| ||||    
T  22422245 gcaaataaataagtttttatatattatttataag-tttttaaggtagtttatgaaaaaacagtt 22422183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 2757153 - 2757085
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 269  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | ||| ||||||||||||||| ||||    
T  2757153 agcttatgcaaataaataag-ttttatgtattatttataagtttttaaag-tagtttatgaaaaaacagtt 2757085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 17546414 - 17546456
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    |||||||||||||| ||| |||||||||||||||||| |||||    
T  17546414 ttttatgtattatttataggcttgtcaaggtagtttacgaaaa 17546456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 30995979 - 30995891
Alignment:
Q  207 caaataaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||| |||||||||||||||   |||||| |  ||||| |||||||||||||||||| | ||||| |||  || ||||||||    
T  30995979 caaataaataaacttttatgtattattattcataagttgatcaagatagtttatgaaaaaatagcttatgaatatatgatttttgttag 30995891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 35997317 - 35997287
Alignment:
Q  327 atttatttgcataagctcaaaaataagtcaa 357  Q
    |||||||||||||||||||||||||||||||    
T  35997317 atttatttgcataagctcaaaaataagtcaa 35997287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 10574245 - 10574181
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||| ||||| |||||| ||||||| ||||| || | |||||||||||||||||||    
T  10574245 agcttatgcaaatacataagtttttatctattatttataagttttt-aaggtagtttatgaaaaaa 10574181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 13097936 - 13097985
Alignment:
Q  216 aagcttttatgtattatt-cataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||| |||||||||| |||||||||||||| || |||||||||||||    
T  13097936 aagctttgatgtattatttcataagcttgtcaaagttgtttatgaaaaaa 13097985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 27881081 - 27881016
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||||||| | | |||||||||||| ||||| || | ||||||| |||||||||||    
T  27881081 agcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaa 27881016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 37419913 - 37419950
Alignment:
Q  193 attttaagcttacgcaaataaataagcttttatgtatt 230  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  37419913 attttgagcttatgcaaataaataagcttttatgtatt 37419950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 1837002 - 1837082
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||| |||||||||||||  ||||  ||||||||||||  |||| || |||| ||||| ||||||| || |||||||||    
T  1837002 agcttaagcaaataaataagtatttacatattattcataaatttgtaaatgtagcttatgcaaaaataattcatgaagata 1837082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 16108178 - 16108114
Alignment:
Q  227 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 291  Q
    ||||||| ||||| |||| ||||||||||||||||||| |  | ||||| ||||||| |||||||    
T  16108178 tattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgtta 16108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 27243607 - 27243575
Alignment:
Q  213 aataagcttttatgtattattcataagcttgtc 245  Q
    |||||||||||| ||||||||||||||||||||    
T  27243607 aataagcttttacgtattattcataagcttgtc 27243575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 32975666 - 32975790
Alignment:
Q  177 ccgtttgtattggttta-ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 275  Q
    ||||||| ||| ||||| |||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |  | |||||    
T  32975666 ccgtttggatttgtttacttttgagcttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaa 32975765  T
Q  276 gatacaatctttgttagcgagaact 300  Q
    |||||||| |||||| | |||||||    
T  32975766 gatacaatttttgtttgtgagaact 32975790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 35168512 - 35168441
Alignment:
Q  212 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  35168512 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaat 35168441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 28879036 - 28879122
Alignment:
Q  176 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 261  Q
    |||||||| ||||| |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28879036 cccgtttgaattggcttatttttgagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 28879122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 38895661 - 38895754
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| ||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||    
T  38895661 agcttatgcaaaaaaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttag 38895754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 34286652 - 34286547
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || | ||||||||||||| || |||||     
T  34286652 ttttgagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtg-aaaaacagcttatgaagatacaattttcgttagg 34286554  T
Q  294 gagaact 300  Q
    |||||||    
T  34286553 gagaact 34286547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 32213111 - 32213043
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 262  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  32213111 ttttaagcttatgcaaataaataagcttttatgtattattcataagcttgtcaggttagtttatgaaaa 32213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 10299003 - 10298909
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||||  |||||||    
T  10299003 gcaaataaattaacttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaact 10298909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 35453407 - 35453477
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  35453407 tttttagcttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaa 35453477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 35285930 - 35286031
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||  | | ||||||||||||| |||  |||||||||    
T  35285930 agcttatgcaaataaataagcttttgtgtgttattcataagctcgtcaaagtagtttatgaaaaaaatgcttatgaagatacaatttttagtagcgagaa 35286029  T
Q  299 ct 300  Q
    ||    
T  35286030 ct 35286031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 42363400 - 42363300
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||  ||| ||||||||||||| |||||||| |||||    
T  42363400 agcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaatttttgttagtgagaa 42363302  T
Q  299 ct 300  Q
    ||    
T  42363301 ct 42363300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 292
Target Start/End: Complemental strand, 24350617 - 24350510
Alignment:
Q  186 ttggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatc 284  Q
    ||||||||||||  || ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| | ||||||||| |||     
T  24350617 ttggtttattttttagtttatgcaaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataatt 24350518  T
Q  285 tttgttag 292  Q
    || |||||    
T  24350517 ttcgttag 24350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 2669630 - 2669715
Alignment:
Q  180 tttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||||||||||| |||||| ||||||||||||||| | |||||||||| ||||| |||| |||||||||||||||||||    
T  2669630 tttggattggtttattttatagcttatgcaaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaa 2669715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 42102109 - 42102192
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||  |||||||||||||||||    
T  42102109 agcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgttaatgaagatacaat 42102192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 8216989 - 8216894
Alignment:
Q  199 agcttacgcaaataaataagctttt-atgtattattcataagcttgtc-aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||| | ||||||||||||| || |||||    
T  8216989 agcttatgcaaattaataagctttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagatacaattttcgttag 8216894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 16972434 - 16972347
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||| || | ||||||||||||| || |||||    
T  16972434 gcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaattttcgttag 16972347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 19327871 - 19327969
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| |||||||||||| ||||||||||||||||||||| |||| || |||||||||| ||||| |||| || |||||||||| |||||||  |||||||    
T  19327871 cttatgcaaataaataaacttttatgtattattcataagtttgt-aatgtagtttatggaaaaacagtttataaagatacaatttttgttaatgagaact 19327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 13265493 - 13265547
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  13265493 gcaaataaataagcttttatgtattattcataagcttgtcaaagtagttcatgaa 13265547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 32131442 - 32131503
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  32131442 agcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaa 32131503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 34102762 - 34102669
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||||||||||||||| || || | || |||||||||||||||  | ||||| || ||||||| |||||||| |||||||    
T  34102762 caaataaataagcttttatgtattattcatgagtttttaaatgtagtttatgaaaaatcaattaataaaaatacaatttttgttagagagaact 34102669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 1089022 - 1089080
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||    
T  1089022 gcaaataaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaaaa 1089080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 292
Target Start/End: Complemental strand, 9131217 - 9131119
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| |||||| ||||||| |||||||||||||||||||| ||||||||||| |  |||||| |||| ||| || | ||||||||||||| || |||||    
T  9131217 ttttgagcttatgcaaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttag 9131119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 14942437 - 14942527
Alignment:
Q  210 ataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||    | |||||||| |||| ||||||||| ||||||    
T  14942437 ataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaagatgcaatttttgttagcaagaact 14942527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 19925559 - 19925657
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| |||||||||||||||||||  ||||||| ||||| |||| |||||| |||| ||||||| | || ||||||||||||| || ||||| ||||    
T  19925559 agcttatgcaaataaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattttcgttagtgaga 19925657  T

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Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 12607089 - 12607165
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||  ||| |||||||||||||    
T  12607089 gcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaacggtttatgaagatacaat 12607165  T

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Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 38338934 - 38338834
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| ||||||||||||| |||||  ||||||| ||||| || | |||||||||||||||||||||||| |||||||||  || || ||||| |||||    
T  38338934 agcttatgcaaataaataagtttttaaatattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatatgattttcgttagtgagaa 38338836  T
Q  299 ct 300  Q
    ||    
T  38338835 ct 38338834  T

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Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 37410987 - 37410904
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || |||||    
T  37410987 aaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttag 37410904  T

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Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 41145488 - 41145414
Alignment:
Q  193 attttaagcttacgcaaataaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||| |||||| |||||||||||||||||||| |||||||   |||||| |||| |||||||||||||||||||    
T  41145488 attttgagcttatgcaaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaa 41145414  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 11988206 - 11988296
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||| |||||||||  ||| ||||||||||||| || ||||| ||||    
T  11988206 gcaaataaataagtttttatgtattatttataag-tttttaaggtagttcatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 11988296  T

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Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 13131439 - 13131542
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtca---------aggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag 296  Q
    |||||||||||||||||||||||||||||||||| ||||||         |||||||||||||||||| || | ||||| ||||||| |||||| | |||    
T  13131439 gcaaataaataagcttttatgtattattcataagtttgtcatgtcaaggtaggtagtttatgaaaaaacagcttatgaaaatacaatttttgtttgtgag 13131538  T
Q  297 aact 300  Q
    ||||    
T  13131539 aact 13131542  T

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Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 14709613 - 14709555
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||||||||||| |||  |||||||||||||||||| |||||||||||||||    
T  14709613 gcaactaaataagcttttaagtacaattcataagcttgtcaagctagtttatgaaaaaa 14709555  T

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Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 28280702 - 28280776
Alignment:
Q  191 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||| |||||| ||||||||||| || ||||||||||||| ||||| |||| || ||||||||||||||||    
T  28280702 ttattttagagcttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaa 28280776  T

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Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 2289970 - 2289905
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||| ||| ||||||| |||||||    
T  2289970 agcttatgcaaataaataagtttttatttattatccataagcttgttaagatagtttaagaaaaaa 2289905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 29243147 - 29243083
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||||||||||||||||| ||||| || | |||||||||||| ||||||    
T  29243147 agcttatgcaaataaataagcttttatgtattatttataag-tttttaaggtagtttattaaaaaa 29243083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 16706183 - 16706119
Alignment:
Q  200 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||| ||||||||||| | |||||||||||||||||||| |||  || ||||||||||||||||    
T  16706183 gcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttatgaaaaaa 16706119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 24087189 - 24087237
Alignment:
Q  216 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||    
T  24087189 aagcttttatatattattcataagcttgtcgagatagtttatgaaaaaa 24087237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 23412743 - 23412801
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||| |||||  |||||||||||||||||| ||||||||  |||||||||||||||    
T  23412743 gcaaatatataagtatttatgtattattcataaacttgtcaatatagtttatgaaaaaa 23412801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 38195491 - 38195580
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 291  Q
    |||| ||||||||||||| |||||| ||||||| ||||| || | ||||||||||| ||||||| |||| ||| | ||||||| |||||||    
T  38195491 cttatgcaaataaataagtttttatatattatttataag-tttttaaggtagtttacgaaaaaacagtttatggaaatacaatttttgtta 38195580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 4326288 - 4326231
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaat 265  Q
    |||||||||||  ||||||||||||||||||| || | || |||||||||||||||||    
T  4326288 aaataaataagtctttatgtattattcataagtttataaatgtagtttatgaaaaaat 4326231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 24867011 - 24866934
Alignment:
Q  223 tatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||| ||||| |||| || |||||||||||||||| || | |||||| |||||| || |||| ||||||||    
T  24867011 tatgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgttatcgagaact 24866934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 218327 - 218245
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  218327 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 218245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 694887 - 694805
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  694887 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 694805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 699096 - 699014
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  699096 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 699014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 731950 - 731868
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  731950 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 731868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 855846 - 855764
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  855846 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 855764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 1184763 - 1184843
Alignment:
Q  178 cgtttgtattggtttattttaa-gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 257  Q
    |||||| ||||| ||||||||| ||||| |||||||||||||| || |||||| ||| | ||| |||| ||||||||||||    
T  1184763 cgtttgaattggcttattttaaagcttatgcaaataaataagcattaatgtatcatttaaaagtttgttaaggtagtttat 1184843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 14262330 - 14262421
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| ||||||||| |||| || |||| ||||| ||||  |||| ||||||||||||||||||| |  | ||||| ||||||| ||||||||    
T  14262330 cttatgcaaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttag 14262421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 26047038 - 26046975
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||| || ||||||||||| ||||||| | ||||||||  ||||||||||||||||||    
T  26047038 cttatgcaaaaaagtaagcttttatttattattaacaagcttgttgaggtagtttatgaaaaaa 26046975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 29218329 - 29218255
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaaaaatagttaatgaagata 279  Q
    |||||| ||||| ||||||||||||||  |||| |||| |||||| |||||  |||||||||||| |||||||||    
T  29218329 caaatacataagtttttatgtattatttttaagtttgttaaggtattttataagaaaaaatagtttatgaagata 29218255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 8752815 - 8752909
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||| |||||||||||| |||||||||| || |  |||||| ||| |||||||||||| || | | ||||||||||  |||||| | |||||||    
T  8752815 gcaaagaaataagcttttgtgtattattcgtaggtgtgtcaaagtaatttatgaaaaaacagcttaagaagatacaaattttgtttgtgagaact 8752909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 402177 - 402124
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaa 247  Q
    |||| |||| ||| ||||||||||| |||||||||||||| ||||| |||||||    
T  402177 tttttagctaacgtaaataaataagtttttatgtattatttataagtttgtcaa 402124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 32924296 - 32924231
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| || |||||||| |||||||| | ||||| ||||||||||  | ||||||||||||||||    
T  32924296 agcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaa 32924231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 19925465 - 19925417
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 254  Q
    |||||||||||||| || |||||||||| |||| ||||| |||||||||    
T  19925465 gcaaataaataagcattaatgtattatttataaacttgttaaggtagtt 19925417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 24747 - 24850
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtc--aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag 296  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| || |||| |||||||||| ||  |||| |||    
T  24747 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcattagtgag 24846  T
Q  297 aact 300  Q
    ||||    
T  24847 aact 24850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 292
Target Start/End: Original strand, 29378621 - 29378740
Alignment:
Q  174 gacccgtttgtattggtttat-tttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaat 272  Q
    |||| ||||| ||||| |||| ||| |||||| |||||||||||||||||||||||||||| || || |||||||||||||||||||||||| || | ||    
T  29378621 gacctgtttggattggcttatctttgagcttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttat 29378720  T
Q  273 gaagatacaatctttgttag 292  Q
    ||||||||||| || |||||    
T  29378721 gaagatacaattttcgttag 29378740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 47511040 - 47511129
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| || | |||||||||||||    
T  47511040 ttttgagcttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaat 47511129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 30181554 - 30181633
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 280  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||    
T  30181554 cttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaaacagcttatgaagatac 30181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 44613557 - 44613492
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  44613557 agcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaa 44613492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 14691377 - 14691282
Alignment:
Q  206 gcaaataaataa-gcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| | || ||||||||| ||| || ||||| |||||||    
T  14691377 gcaaataaataaagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaact 14691282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 34922935 - 34922998
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  34922935 cttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaa 34922998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 20888582 - 20888660
Alignment:
Q  206 gcaaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||| | || |||||||||||||    
T  20888582 gcaaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaat 20888660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 196 - 266
Target Start/End: Original strand, 41037752 - 41037821
Alignment:
Q  196 ttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 266  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  41037752 ttaagcttatgcaaataaataagcttttatgtattattca-aagcttgtcaaggtaatttatgataaaata 41037821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 29390632 - 29390536
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||| || |||||| ||||    
T  29390632 cttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaaaacaactt-atgaagatacaattttcgttagctagaa 29390536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 38372560 - 38372661
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||  || | | ||||| ||||| || ||||| |||||    
T  38372560 agcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaacaattttcgttagtgagaa 38372659  T
Q  299 ct 300  Q
    ||    
T  38372660 ct 38372661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 41094227 - 41094285
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  41094227 gcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaaa 41094285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 48021724 - 48021648
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||||||| |||| |||||||||||||||||| || ||||||||||| ||||||  |||||||||||||||    
T  48021724 gcaaataaataagctcttatttattattcataagcttgttaaagtagtttatga-aaaataactaatgaagatacaat 48021648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 22032766 - 22032865
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| ||||||||||| | |||||||||||||| |||||| ||| || |||||||||||||||| | || |||||| |||||| || ||||| |||||||    
T  22032766 cttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaact 22032865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 22575590 - 22575681
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| ||||||||||| | |||||||||||||| ||||| |||| ||| || |||||||||||| |||| ||||||||||||| || |||||    
T  22575590 cttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatacaattttcgttag 22575681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 208 - 299
Target Start/End: Complemental strand, 23356566 - 23356475
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 299  Q
    |||||||||||  ||| ||||||||||| ||| ||||||||||| |||||||||||| |||| ||||| |||| || |||||||| ||||||    
T  23356566 aaataaataaggctttttgtattattcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgttagtgagaac 23356475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 33288188 - 33288134
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaag 248  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  33288188 ttttgagcttatgcaaataaataagcttttatgtattattcattagcttgtcaag 33288134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 43391732 - 43391814
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 290  Q
    |||||||||| ||| | | ||||||||||||| |||| ||||||||||||||||||||| || ||||||||| ||| ||||||    
T  43391732 aaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtt 43391814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 7098176 - 7098119
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||    
T  7098176 caaataaataagattttatgaattattcataagtttgtcaagatagtttatgaaaaaa 7098119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 40629492 - 40629440
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  40629492 caaataaataaacttt-atgtattattcataagcttgtcaaggtagtttatgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 19308566 - 19308482
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    ||||||||||  ||| |||||||||||||||| |||| | |||||||||||||||| ||| | |||||||| |||| ||||||||    
T  19308566 aaataaataaaatttcatgtattattcataagtttgttagggtagtttatgaaaaattagcttatgaagatccaatttttgttag 19308482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 23119997 - 23119913
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 290  Q
    |||||||||||| |||| | |||||||||||||| ||||||| |||||||| |||| || ||||  |||||||||||| ||||||    
T  23119997 gcaaataaataatctttaaagtattattcataagtttgtcaatgtagtttaagaaataacagtttgtgaagatacaatttttgtt 23119913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 41677378 - 41677478
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-tagttaatgaagatacaatctttgttagcgagaac 299  Q
    |||| ||||||||||||  |||||||||||||||||||| ||||||| ||||||||| ||||||  || | ||||||||||||| || ||| | ||||||    
T  41677378 cttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttattaaaaaaccagattatgaagatacaattttagtttgtgagaac 41677477  T
Q  300 t 300  Q
    |    
T  41677478 t 41677478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 48895305 - 48895401
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-----aaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||||||||||| || || |||||||||||||||| |||||||||||||||     |||||| |||| ||||||||||||| |||| ||| ||||    
T  48895305 gcaaataaataagcattcatatattattcataagcttatcaaggtagtttatgagacaaaaaaacagtttatgaagatacaatttttgatagtgaga 48895401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 14536905 - 14536964
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| | || |||||||||    
T  14536905 ttttatgtattattcataagattgtcaagatagtttatgaaaaaacactttatgaagata 14536964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 35809094 - 35809157
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||||||||||| || |||||||||| |||||||||| || ||||||||||||||||    
T  35809094 cttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaa 35809157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 14676041 - 14675960
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| ||||||||||| |  ||||||||||||| ||||| || | ||||||||||||||||||| |||| |||||||||||||    
T  14676041 cttatgcaaataaataggtgtttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaat 14675960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 32917669 - 32917575
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||||| |||||||||| |||||||||||| |||  || ||||| ||||||| |  | ||||||||| ||| |||||||| |||||||    
T  32917669 gcaaataaataagtttttatgtatcattcataagcttatcatagtggtttacgaaaaaacaacttatgaagatataatttttgttagtgagaact 32917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 37779362 - 37779303
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||||||||||||||||      |||||||||||||||||||||||||||||||||    
T  37779362 agcttatgcaaataaataagcttttat------ttcataagcttgtcaaggtagtttatgaaaaaa 37779303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 31613741 - 31613684
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||  || |||||||||||||| |||||||||| ||||||||||||||||    
T  31613741 caaataaataaatttgtatgtattattcattagcttgtcaatgtagtttatgaaaaaa 31613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 46743959 - 46744056
Alignment:
Q  206 gcaaataaataagcttttatgtattatt----cataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||||||||| ||||||||||||||    |||||||||||| |||||||| ||||||||| ||   ||||||||||||| || ||||| |||||||    
T  46743959 gcaaataaataagattttatgtattatttatccataagcttgtc-aggtagttaatgaaaaaacagcatatgaagatacaattttcgttagtgagaact 46744056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 300
Target Start/End: Complemental strand, 47654498 - 47654397
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| | ||||||||| ||  | |||||||||  |||||||||| || |||||||||||||||| |||| |||||| |||||| || ||||| |||||    
T  47654498 agcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaa 47654399  T
Q  299 ct 300  Q
    ||    
T  47654398 ct 47654397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 14593150 - 14593217
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcata--agcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||||||||   |||||||||||||||||  |||||||||| ||||||||||||||||    
T  14593150 agcttatgcaaataaataaaagtttatgtattattcatataagcttgtcaaagtagtttatgaaaaaa 14593217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 21027597 - 21027513
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| | ||| ||||||| |||||||||||||| ||||| || | ||||| ||||||||||||| ||||  ||||||||||||    
T  21027597 agcttatgtaaacaaataagtttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaat 21027513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 41094144 - 41094204
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 254  Q
    |||| |||||| |||||||||||| ||| ||||||||||||||||||||| ||| ||||||    
T  41094144 tttttagcttatgcaaataaataaacttctatgtattattcataagcttgccaatgtagtt 41094204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 6406939 - 6406872
Alignment:
Q  216 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||| |||||||  | |||||||||||||||||||||||||| || | |||||||| ||||    
T  6406939 aagcttttatgcattattctaaggcttgtcaaggtagtttatgaaaaaacagcttatgaagatgcaat 6406872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 16958820 - 16958910
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| |||| |||||||  |||||||||||||| ||||| || | |||||||||||||||||||  ||| ||||||||||||| || |||||    
T  16958820 cttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattttcgttag 16958910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 18855345 - 18855274
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||||| ||||||| |||| |||  ||||||||||||| |||||||||| |||||||| | |||||||||    
T  18855345 aaataaatgagcttttttgtaatatgtataagcttgtcaatgtagtttatggaaaaatagattatgaagata 18855274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 44799413 - 44799502
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||||||||| |||||| ||||||| ||||| || | |||||||||| ||||||||||||| ||||||||| ||| || ||||| ||||    
T  44799413 gcaaataaataagtttttat-tattatttataagttttt-aaggtagtttttgaaaaaatagtttatgaagatagaatattcgttagtgaga 44799502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 1054157 - 1054087
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||   | |||| ||||||||| ||||||    
T  1054157 ttttgagcttatgcaaataaataagcttttatgtattattcaaaaaaatttcaatgtagtttataaaaaaa 1054087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 18837231 - 18837289
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||||| | |||||||||||||||||||| |||||| || || ||||||    
T  18837231 gcaaataaataagcttatgtgtattattcataagcttgtaaaggtacttaataaaaaaa 18837289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 28759903 - 28759857
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 266  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||||    
T  28759903 ttttatttattattcataagcttgttaaggtagtttataaaaaaata 28759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 23137238 - 23137163
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| ||||||  |||||||||||||| ||||| || | ||||||||||||| |||||| ||| |||||||||||||    
T  23137238 caaacaaataaatttttatgtattatttataagttttt-aaggtagtttatgtaaaaatcgtttatgaagatacaat 23137163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 24414534 - 24414590
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||| | |||||||||||| ||||||||||||||| ||| |||| ||||||    
T  24414534 aaataaataaacatttatgtattatccataagcttgtcaagatagcttataaaaaaa 24414590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 16933011 - 16932921
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| |||| |||||||  |||||||||||||| ||||| || | |||||||||||||||||||   || ||||||||||||| || |||||    
T  16933011 cttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttag 16932921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 16938394 - 16938304
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| |||| |||||||  |||||||||||||| ||||| || | |||||||||||||||||||   || ||||||||||||| || |||||    
T  16938394 cttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttag 16938304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 28004586 - 28004668
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 282  Q
    |||||| ||||||||||||| |||||||||||||| ||||  || | || ||||||||||||||||   || ||||||||||||    
T  28004586 agcttatgcaaataaataagtttttatgtattatttataatttttttaa-gtagtttatgaaaaaaccatttatgaagatacaa 28004668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 35246676 - 35246738
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||||||||||| |||||||||||||| | ||| || | |||||||||||||||||||    
T  35246676 cttatgcaaataaataagtttttatgtattatttaaaag-tttttaaggtagtttatgaaaaaa 35246738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 48949729 - 48949815
Alignment:
Q  206 gcaaataaataagcttttatgta-ttattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||||||| || ||||||||| ||||| ||||| || | ||||||||||||||||||| |||| ||||||||| ||| || |||||    
T  48949729 gcaaataaatgagtttttatgtaattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatataatattcgttag 48949815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 49104444 - 49104401
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||||||||||||||||| || ||||||| ||||||||||||    
T  49104444 ttttatgtattattcataagtttatcaaggtggtttatgaaaaa 49104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 21249160 - 21249198
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataag 239  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  21249160 cttatgcaaataaataagtttttatgtattattcataag 21249198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 29778476 - 29778438
Alignment:
Q  320 aaaattaatttatttgcataagctcaaaaataagtcaat 358  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  29778476 aaaatttatttatttgcataagctaaaaaataagtcaat 29778438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 37465951 - 37465869
Alignment:
Q  219 cttttatgtattattcataagcttgtcaaggtagtttat-gaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    ||||||| |||||||||||| ||||| ||| |||||||| ||||||| |  | || |||||||||| |||||| |||||||||    
T  37465951 cttttatttattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaatatttgttggcgagaact 37465869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 42083492 - 42083434
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 266  Q
    ||||||||||| |||||||||||||||||||| |||| ||  || |||||| |||||||    
T  42083492 aaataaataagtttttatgtattattcataagtttgtaaatataatttatggaaaaata 42083434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 47648547 - 47648605
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||| ||||||| |||||||||  | ||||| ||| |||||||||||||||    
T  47648547 gcaaataaataaacttttatttattattcacgaacttgttaagatagtttatgaaaaaa 47648605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 24371490 - 24371430
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||||||||||||| ||| |||||||||| ||||| || | |||||||||||||||    
T  24371490 agcttatgcaaataaataagttttaatgtattatttataag-tttttaaggtagtttatgaa 24371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 25536280 - 25536340
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||||| ||||||||||| |||||||||||||| ||||  || | |||||||||||||||    
T  25536280 agcttacgtaaataaataagtttttatgtattatttataa-atttttaaggtagtttatgaa 25536340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 26331813 - 26331874
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| | |||||||||||||||| || |||  || ||||||||| |||||||||||||||    
T  26331813 agcttatgtaaataaataagcttttctgcattgatcgtaagcttgttaaggtagtttatgaa 26331874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 34927147 - 34927204
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||||||||| ||| | |||||||||||||| |||||||||| | || ||||||||    
T  34927147 gcaaataaataaacttatctgtattattcataaacttgtcaaggcaattcatgaaaaa 34927204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 39279458 - 39279515
Alignment:
Q  226 gtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||||||||||| ||||| ||||||||||||  || | | |||||||||||    
T  39279458 gtattattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaat 39279515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 991504 - 991583
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    |||| ||| ||||||||| ||||||| |||||| ||||| || | |||||||||||||||||||   || |||||||||||    
T  991504 cttatgcacataaataagtttttatgcattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagataca 991583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 17944524 - 17944564
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattc 234  Q
    |||| |||||| |||||||||||||||||||| ||||||||    
T  17944524 ttttgagcttatgcaaataaataagcttttatatattattc 17944564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 17944686 - 17944738
Alignment:
Q  230 tattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 282  Q
    ||||||||||||||||||||||||||||  ||||| |  | ||||||||||||    
T  17944686 tattcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaa 17944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 39803035 - 39803115
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttg 288  Q
    |||||||| ||||||| | |||| || ||||| |||||||  | |||||||||||||||  | ||||||||||||| ||||    
T  39803035 aaataaatgagcttttttctattgtttataagtttgtcaacattgtttatgaaaaaataagttatgaagatacaatttttg 39803115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 21025316 - 21025227
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||   |||||||||||||    
T  21025316 tttttagcttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaat 21025227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 24625860 - 24625937
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| | |||||||||||||    
T  24625860 gcaaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaaaattagcttatgaagatacaat 24625937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 10054375 - 10054450
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 266  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  10054375 ttattttgagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaata 10054450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 2034318 - 2034248
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  2034318 ttttgagcttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaa 2034248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 2255738 - 2255836
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 299  Q
    |||| |||||||||| ||||||||||||| |||||||||||||| |||||| |||||||||||| || | ||||||||||||| |||| ||| ||||||    
T  2255738 cttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaatttttggtagtgagaac 2255836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 200 - 317
Target Start/End: Original strand, 7267778 - 7267895
Alignment:
Q  200 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 299  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |  | |||||| |||||| || | | | |||||     
T  7267778 gcttatgcaaacaaataagcttttatgtattattcataagcttgccaaggtagtttatgaaaaaacaacttatgaaggtacaattttcgctggtgagaag 7267877  T
Q  300 tgagaacgtatgaattaa 317  Q
    ||||||| || |||||||    
T  7267878 tgagaacttacgaattaa 7267895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 10755369 - 10755296
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatag 267  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  10755369 tttttagcttatgcaaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatag 10755296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 302
Target Start/End: Original strand, 8014790 - 8014893
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 298  Q
    |||||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||  |   ||||||||||||| || ||||| || ||    
T  8014790 agcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggtagtttatgaaaaaactgcatatgaagatacaattttggttagtgaaaa 8014889  T
Q  299 ctga 302  Q
    ||||    
T  8014890 ctga 8014893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 1240687 - 1240630
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1240687 caaataaataagcttttatgtattattcataagcttgtcaaggtaatttacgaaaaaa 1240630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 2027260 - 2027167
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| ||||||||||||||||||||| |||||||| ||| ||||||||  |||||||||||||| || | ||||||||||||  ||||||||    
T  2027260 agcttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttag 2027167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 30533982 - 30534046
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  30533982 agcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaa 30534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 199 - 317
Target Start/End: Complemental strand, 3211085 - 3210962
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa-----aaaatagttaatgaagatacaatctttgttagc 293  Q
    |||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||     |||| || | ||||||||||||| ||  |||      
T  3211085 agcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttatgaagaaaaaaaacagcttatgaagatacaattttcattaat 3210986  T
Q  294 gagaactgagaacgtatgaattaa 317  Q
    |||| |||||||| ||||||||||    
T  3210985 gagagctgagaacttatgaattaa 3210962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 6776810 - 6776893
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 282  Q
    |||||| |||||||||||||||||||| || ||| ||||||||||| ||||||||||||| |||||||  | ||||||||||||    
T  6776810 agcttatgcaaataaataagcttttatttaatatccataagcttgttaaggtagtttatggaaaaataacttatgaagatacaa 6776893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 201 - 300
Target Start/End: Complemental strand, 32675971 - 32675872
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| |||||||||||||||||||| ||||||||||||||||   ||||| |||||||||||||||  | ||||||||||||| ||  |||| |||||||    
T  32675971 cttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaact 32675872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 9894768 - 9894833
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||| |||||| ||||||||||||    
T  9894768 agcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatgaaaaaa 9894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 201 - 300
Target Start/End: Original strand, 6758631 - 6758730
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||| |||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||| ||  | || |||||||||  || ||||| |||||||    
T  6758631 cttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagatacaaatttcgttagtgagaact 6758730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 12817174 - 12817116
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatga 259  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  12817174 cttatgcaaataaataagctttaatgtattattcataagctagtcaatgtagtttatga 12817116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 21891422 - 21891360
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 261  Q
    |||||| ||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||    
T  21891422 agcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaa 21891360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 10873988 - 10874070
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||| ||| ||||||||||||||||  |||||| |||||||||| |||||||||||||| |||| || | |||||||||||||    
T  10873988 agcttatgcatataaataagcttttat--attattaataagcttgttaaggtagtttatgagaaaacagcttatgaagatacaat 10874070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 29052326 - 29052419
Alignment:
Q  191 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||| ||||||  |||| |||||| ||||||||||||||| ||||| |||| |||||| |||||||||||| |||| |||| ||||||||    
T  29052326 ttattttagagcttatacaaaaaaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaat 29052419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 6632663 - 6632726
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||||||||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  6632663 cttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaa 6632726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 25430839 - 25430785
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||    
T  25430839 caaataaataagcatttatgtatt---cataagcttgtcaaggtagtttatgaaaaaa 25430785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 34509931 - 34509994
Alignment:
Q  216 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| |||| |||| |||||||||    
T  34509931 aagcttttatgtattattcataagtttgtcaatggagtttatgataaaagagtttatgaagata 34509994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 10687309 - 10687413
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtatt---attcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcga 295  Q
    |||||| ||||||||||||||||| |||||||   |||||||||| | | ||||||||||||| ||||| |  | ||| ||||||||| || ||||||||    
T  10687309 agcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagatacaattttcgttagcga 10687408  T
Q  296 gaact 300  Q
    |||||    
T  10687409 gaact 10687413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 4808574 - 4808666
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||||||| || ||| |||||||||| ||||| || | ||| ||||||||||||||| |||| ||||||||||||| || |||||    
T  4808574 agcttatgcaaataaatgagttttcatgtattatttataagttttt-aagatagtttatgaaaaaacagtttatgaagatacaatattcgttag 4808666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 13429488 - 13429541
Alignment:
Q  230 tattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||||||||||| |||||||||||||||| |||| |||| ||||||||    
T  13429488 tattcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaat 13429541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 21610133 - 21610040
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||||||||    |||||| |||||| |||||||||| || ||||||||||||||||||||| ||||| ||| ||| || |||||    
T  21610133 agcttatgcaaataaatatttctttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatataattttcgttag 21610040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 32165335 - 32165247
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||||||| |||||||||||||| ||||  || | ||| ||||||||||||||| |||| ||||||||||||| || ||||| ||||    
T  32165335 aaataaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 32165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 2040261 - 2040209
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| ||||||||    
T  2040261 aaataaataagcttttatttattattcataagtttgttaaggtaatttatgaa 2040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 23239257 - 23239313
Alignment:
Q  207 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    ||||||||||||||||||| |||||||||||||||||| || || |||||| |||||    
T  23239257 caaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaa 23239313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 16589774 - 16589833
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||||||||||||||||| ||||||| | |||||||||||||| | || |||||||||    
T  16589774 ttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagata 16589833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 16605606 - 16605547
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 279  Q
    |||||||||||||||||||| ||||||| | |||||||||||||| | || |||||||||    
T  16605606 ttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagata 16605547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 292
Target Start/End: Complemental strand, 9202493 - 9202390
Alignment:
Q  193 attttaagcttacgcaaataaataagcttttatgtattattcataagcttg----tcaaggtagtttatgaaaaaatagttaatgaagatacaatctttg 288  Q
    ||||| |||||| |||||| |||||||||||  ||||||| ||||||||||    |||||| |||||||||||||| ||   ||||||||||||| |||     
T  9202493 attttgagcttatgcaaatgaataagcttttccgtattatacataagcttgtaactcaaggcagtttatgaaaaaacagcatatgaagatacaattttta 9202394  T
Q  289 ttag 292  Q
    ||||    
T  9202393 ttag 9202390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 21871365 - 21871308
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatga 259  Q
    |||| |||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||    
T  21871365 cttatgcaaataagtaaacttttatgtattattgataa-cttgtcaaggtagtttatga 21871308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 32615498 - 32615401
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||||| ||||||||||||| |||||||||||||| ||||  || | ||||||||| |||||||||   || ||||||||||||| || ||||| ||||    
T  32615498 agcttatgcaaataaataagtttttatgtattatttataa-atttttaaggtagttgatgaaaaaactatttatgaagatacaattttcgttagtgaga 32615401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 10184413 - 10184321
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| | ||||||||||| |||||| ||||||| ||||| || | ||||||||||||||||||| | || ||||||| ||||| || |||||    
T  10184413 agcttatgtaaataaataagtttttatctattatttataagttttt-aaggtagtttatgaaaaaacaatttatgaagaaacaattttcgttag 10184321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 17914948 - 17915040
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||| |||||||||||   |||||||||||||| ||||| || | |||||||||||||||||||| | | ||||| ||||||| || |||||    
T  17914948 agcttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattttcgttag 17915040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 34801141 - 34801069
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||| |||||| | |||||||||| ||||||| ||||||||||||| |||  ||| |||||||||||||||    
T  34801141 ttattttgagcttatgtaaataaataaacttttatttattattcataag-ttggtaagatagtttatgaaaaaa 34801069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 1468178 - 1468241
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||| ||||||||||||| |||||||||||||| || || || | ||||||||||||||||||    
T  1468178 agcttatgcaaataaataagtttttatgtattatttat-aggtttttaaggtagtttatgaaaaa 1468241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 8011121 - 8011065
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||| || || ||||||| ||||| ||||||||||||||| ||||||||    
T  8011121 aaataaataagcattaatatattatttataagtttgtcaaggtagtttttgaaaaaa 8011065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 3830002 - 3829911
Alignment:
Q  200 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 291  Q
    ||||| ||||||||||| |||||||| | ||||||||||  || | | ||||||||||||||||| |  | ||||||||| ||| |||||||    
T  3830002 gcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaaatttttgtta 3829911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 7446934 - 7446855
Alignment:
Q  211 taaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 290  Q
    |||||||||||| |||||| |||||||||| ||| ||||| |||||| ||| || |  | ||||||||||||| ||||||    
T  7446934 taaataagctttaatgtatcattcataagcctgttaaggttgtttataaaacaacaacttatgaagatacaatttttgtt 7446855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 9201815 - 9201768
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtca 246  Q
    |||||| |||||| ||||||||||  ||||||||||||||||||||||    
T  9201815 agcttatgcaaatgaataagctttgctgtattattcataagcttgtca 9201768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 18078309 - 18078238
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 291  Q
    |||||| |||| |||||||| ||||||| ||| |||||||||||| |||| || |||||| ||| |||||||    
T  18078309 ttttatttatttttcataagtttgtcaatgtattttatgaaaaaacagtttataaagatataatttttgtta 18078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 29623559 - 29623496
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| |||||||||||| ||||||| ||||||| || || |||| || ||||||||||||||||    
T  29623559 cttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaa 29623496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 715940 - 715902
Alignment:
Q  254 ttatgaaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  715940 ttatgaaaaaatagtttatgaagatacaatttttgttag 715902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 991360 - 991282
Alignment:
Q  206 gcaaataaataagcttttatgtattattc-ataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||| |||||||||||||||||| ||||  ||||| ||||||||  |||||||| ||||| | || |||||||||||||    
T  991360 gcaagtaaataagcttttatgtaatattagataagtttgtcaagtcagtttatggaaaaacaattgatgaagatacaat 991282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 5958404 - 5958355
Alignment:
Q  220 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 269  Q
    |||||||||||||| ||| | ||||| | |||||||||||||||||||||    
T  5958404 ttttatgtattatttatatgtttgtcgatgtagtttatgaaaaaatagtt 5958355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 6958649 - 6958690
Alignment:
Q  222 ttatgtattattcataagcttgtcaaggtagtttatgaaaaa 263  Q
    |||||||| |||||||||||| |||||||||||| |||||||    
T  6958649 ttatgtatcattcataagcttctcaaggtagtttgtgaaaaa 6958690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 34413322 - 34413386
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| | ||||||||| | |||||||||||||| ||||| |||| || ||||||||||||||||    
T  34413322 agcttaggaaaataaata-gattttatgtattatttataagtttgtaaatgtagtttatgaaaaaa 34413386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 35111419 - 35111358
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    |||||| ||||||||| ||||||||| ||| ||||||||||| | ||||| ||||| |||||    
T  35111419 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 35111358  T

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Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 716000 - 715948
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 260  Q
    ||||||||||| || ||||||||||| |||| ||||| ||||| |||||||||    
T  716000 aaataaataagtttctatgtattatttataaacttgtaaaggtggtttatgaa 715948  T

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Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 1172349 - 1172381
Alignment:
Q  210 ataaataagcttttatgtattattcataagctt 242  Q
    |||||| ||||||||||||||||||||||||||    
T  1172349 ataaatgagcttttatgtattattcataagctt 1172381  T

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Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 10730303 - 10730255
Alignment:
Q  221 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 269  Q
    ||||||||||||| |||| ||||| || |||||||||||||||| ||||    
T  10730303 tttatgtattatttataaacttgttaatgtagtttatgaaaaaacagtt 10730255  T

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Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 300
Target Start/End: Complemental strand, 35071475 - 35071411
Alignment:
Q  237 aagcttgtcaaggtagtttatgaa-aaaatagttaatgaagatacaatctttgttagcgagaact 300  Q
    |||||||||||||||||||||||| ||||||| | |||||||| |||| ||| || | |||||||    
T  35071475 aagcttgtcaaggtagtttatgaaaaaaatagcttatgaagatgcaatgtttttttgtgagaact 35071411  T

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Target: scaffold0024 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 97290 - 97225
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  97290 agcttatgcaaataaataagctattatgtagtattcataagctagtcaaggtagtttatgaaaaaa 97225  T

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Target: scaffold0012 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 178504 - 178596
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttag 292  Q
    |||| |||||||||||||||||||||||||||| ||||| || | |||||| |||||| ||||||||||| ||||||||||||| || |||||    
T  178504 cttatgcaaataaataagcttttatgtattatttataagtttcttaaggtattttatgaaaaaaatagtttatgaagatacaattttcgttag 178596  T

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Target: scaffold0332 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 14835 - 14729
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 293  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||| || | || |||||||||||||||  |||| || || ||||||| || |||||     
T  14835 ttttgagcttatacaaataaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagt 14736  T
Q  294 gagaact 300  Q
    |||||||    
T  14735 gagaact 14729  T

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Target: scaffold0332; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 14946 - 14853
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaat-agttaatgaagatacaat 283  Q
    ||||||| ||||||  | ||||||||||||||||||||| ||||||||| || | || |||||| |||||||||| |||| || ||||||||||    
T  14946 ttattttgagcttatacgaataaataagcttttatgtatcattcataagtttttaaatgtagttaatgaaaaaatcagtttataaagatacaat 14853  T

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Target: scaffold0041 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 109069 - 109011
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  109069 gcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaaa 109011  T

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Target: scaffold0041; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 109152 - 109092
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 254  Q
    |||| |||||| |||||||||||| ||| ||||||||||||||||||||| ||| ||||||    
T  109152 tttttagcttatgcaaataaataaacttctatgtattattcataagcttgccaatgtagtt 109092  T

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Target: scaffold0512 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 4076 - 4135
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatag 267  Q
    ||||||||||||||| |||||||||| |||||||||| ||| ||||||||||||||||||    
T  4076 aaataaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatag 4135  T

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Target: scaffold0048 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 58943 - 58868
Alignment:
Q  208 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 283  Q
    |||||||||| | |||||||||||||| |||| ||||||| ||||||||||||||| || || |||||||||||||    
T  58943 aaataaataaacgtttatgtattattcttaagtttgtcaatgtagtttatgaaaaagtattttatgaagatacaat 58868  T

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Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 43893 - 43835
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  43893 gcaaataaataagtttttatgtattattcaaaagcttgtcgaggtagtttataaaaaaa 43835  T

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Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 24472 - 24418
Alignment:
Q  199 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 254  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  24472 agcttatgcaaataaata-gcttgtatgtattattcataagcttgtcaaggtagtt 24418  T

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Target: scaffold1367 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 1062 - 1143
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 282  Q
    |||| |||||||||||||||||||| |||||| |||||| |||| |||||| |||||| |||||||  | ||||||||||||    
T  1062 cttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaa 1143  T

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Target: scaffold0299 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 11382 - 11302
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 281  Q
    |||| |||||||||||||||||||| |||||| ||| ||||||| |||||| |||||| |||||||  | |||||||||||    
T  11382 cttatgcaaataaataagcttttatttattatccattagcttgttaaggtaatttatggaaaaataacttatgaagataca 11302  T

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Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 142333 - 142406
Alignment:
Q  191 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||  ||| | || ||| ||||||||||||    
T  142333 ttattttgagcttatgcaaataaatgagcttttatgtattattcatatacttattaatgtaatttatgaaaaaa 142406  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 227688 - 227773
Alignment:
Q  180 tttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    |||| ||||| |||||||| |||||| || ||||||||||| || ||||| |||| ||||| |||| |||||||||||||||||||    
T  227688 tttggattggcttattttagagcttatgcgaataaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaa 227773  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 242716 - 242626
Alignment:
Q  206 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    ||||||||||||| |||||||||||||  ||||| || ||||| || |||||| ||||| || | |||||||||| || || ||||||||||    
T  242716 gcaaataaataagtttttatgtattatatataag-ttttcaagctattttatggaaaaacaggttatgaagatacgattttcgttagcgaga 242626  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 89342 - 89282
Alignment:
Q  194 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 254  Q
    ||||||||||| ||||||||| ||| ||| ||||| ||||||||||||| |||||||||||    
T  89342 ttttaagcttatgcaaataaaaaagttttaatgtactattcataagcttatcaaggtagtt 89282  T

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Target: scaffold0071 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 18189 - 18148
Alignment:
Q  223 tatgtattattcataagcttgtcaaggtagtttatgaaaaaa 264  Q
    ||||||||||||| |||||||| |||||||||| ||||||||    
T  18189 tatgtattattcacaagcttgtaaaggtagtttctgaaaaaa 18148  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 297
Target Start/End: Complemental strand, 279073 - 278978
Alignment:
Q  201 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 297  Q
    |||| ||||||| ||||  |||||||||||||| ||||| || | |||||||||||||||||||   || || |||||||||  |||||||| ||||    
T  279073 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttataaagatacaaattttgttagtgaga 278978  T

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