View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13697_high_10 (Length: 350)
Name: NF13697_high_10
Description: NF13697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13697_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 24 - 331
Target Start/End: Original strand, 45974059 - 45974366
Alignment:
| Q |
24 |
tggcattgactattttgcaactctccaacccattacaagttaaatcaacagtgcacaatgtcacaagttcacaaccaaccacattacatcaccatcacat |
123 |
Q |
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| T |
45974059 |
tggcattgactattttgcaactctccaacccattacaagttaaatcaacagtgcacaatgtcacaagttcacaaccaaccacattacatcaccatcacat |
45974158 |
T |
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| Q |
124 |
tcacgttttctctgtgtttttcagttaccagtacctccattattattagcactatagcatatcacatttcctctttatcggaaaaccatatcccgcttta |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45974159 |
tcacgttttctctgtgtttttcagttaccagtacctccattattattagcactatagcatatcacatttcctctttatcggaaaaccatatcccgcttta |
45974258 |
T |
|
| Q |
224 |
aacatcgcaactacgcgattatacttatcaatctgtcttctaagtttcttaagagtaaaatacaattcagcttccaactatatattatgcataataatta |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45974259 |
aacatcgcaactacgcgattatacttatcaatctgtcttctaagtttcttaagagtaaaatacaattcagcttccaactatatattatgcataataatta |
45974358 |
T |
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| Q |
324 |
gttcaagt |
331 |
Q |
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||| |||| |
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| T |
45974359 |
gttgaagt |
45974366 |
T |
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