View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13697_low_11 (Length: 290)

Name: NF13697_low_11
Description: NF13697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13697_low_11
NF13697_low_11
[»] chr7 (33 HSPs)
chr7 (9-194)||(37786758-37786943)
chr7 (9-182)||(19830423-19830596)
chr7 (9-183)||(19590527-19590701)
chr7 (11-183)||(32004985-32005157)
chr7 (9-195)||(38858633-38858819)
chr7 (9-182)||(4641443-4641616)
chr7 (9-182)||(29100220-29100393)
chr7 (11-183)||(35289272-35289444)
chr7 (11-183)||(2659211-2659383)
chr7 (11-183)||(34534162-34534334)
chr7 (16-179)||(23953105-23953268)
chr7 (25-183)||(19590909-19591068)
chr7 (16-182)||(4478076-4478242)
chr7 (25-183)||(2658841-2659000)
chr7 (25-183)||(38859025-38859184)
chr7 (26-183)||(32004616-32004774)
chr7 (27-183)||(37787153-37787310)
chr7 (25-183)||(19830804-19830962)
chr7 (47-183)||(28583441-28583577)
chr7 (25-183)||(34533793-34533952)
chr7 (26-183)||(35288905-35289063)
chr7 (25-172)||(29099863-29100011)
chr7 (43-183)||(38160953-38161093)
chr7 (25-182)||(4641828-4641983)
chr7 (25-183)||(23952732-23952892)
chr7 (44-183)||(28584326-28584465)
chr7 (9-183)||(35579256-35579429)
chr7 (16-51)||(32427397-32427432)
chr7 (9-55)||(35579028-35579074)
chr7 (9-55)||(26026688-26026734)
chr7 (9-55)||(48247721-48247767)
chr7 (26-187)||(9393734-9393894)
chr7 (140-192)||(34594576-34594628)
[»] chr6 (36 HSPs)
chr6 (9-183)||(11276951-11277125)
chr6 (9-183)||(10900299-10900473)
chr6 (9-183)||(18257139-18257313)
chr6 (9-183)||(20741102-20741276)
chr6 (9-183)||(15828010-15828184)
chr6 (11-183)||(1149802-1149975)
chr6 (11-183)||(12935528-12935700)
chr6 (9-183)||(18505288-18505462)
chr6 (9-183)||(31470685-31470859)
chr6 (9-183)||(11444989-11445163)
chr6 (9-183)||(28472639-28472812)
chr6 (9-183)||(29859828-29860001)
chr6 (25-183)||(2319674-2319832)
chr6 (9-182)||(2322588-2322760)
chr6 (16-182)||(10899942-10900109)
chr6 (25-183)||(12935159-12935318)
chr6 (22-183)||(4811374-4811535)
chr6 (9-183)||(23074001-23074164)
chr6 (25-194)||(11445371-11445541)
chr6 (25-183)||(22219737-22219896)
chr6 (25-183)||(23075512-23075671)
chr6 (16-183)||(11276592-11276760)
chr6 (32-183)||(15827640-15827794)
chr6 (25-182)||(18504922-18505080)
chr6 (25-194)||(31470306-31470476)
chr6 (25-183)||(20741485-20741647)
chr6 (43-187)||(29033432-29033577)
chr6 (68-183)||(18257565-18257680)
chr6 (43-185)||(29035040-29035182)
chr6 (49-182)||(3835135-3835268)
chr6 (44-183)||(18296147-18296285)
chr6 (59-183)||(4811675-4811799)
chr6 (97-183)||(1149467-1149553)
chr6 (10-92)||(35163557-35163639)
chr6 (129-183)||(22534214-22534268)
chr6 (9-49)||(32836367-32836407)
[»] chr5 (48 HSPs)
chr5 (9-183)||(19359138-19359312)
chr5 (9-183)||(2865124-2865298)
chr5 (9-183)||(18183338-18183512)
chr5 (9-183)||(5819298-5819472)
chr5 (9-183)||(8647440-8647614)
chr5 (9-192)||(29455111-29455294)
chr5 (9-183)||(24362205-24362379)
chr5 (9-193)||(15708963-15709146)
chr5 (9-183)||(8460932-8461106)
chr5 (13-183)||(14215616-14215786)
chr5 (9-182)||(15372242-15372415)
chr5 (9-183)||(164560-164734)
chr5 (20-183)||(14463901-14464063)
chr5 (25-182)||(5818932-5819090)
chr5 (25-182)||(18182973-18183131)
chr5 (25-185)||(2864754-2864915)
chr5 (9-186)||(24331929-24332110)
chr5 (25-183)||(8647822-8647981)
chr5 (25-183)||(19359520-19359679)
chr5 (9-183)||(16018591-16018763)
chr5 (25-184)||(14215242-14215402)
chr5 (25-179)||(24361843-24361997)
chr5 (25-189)||(8461315-8461480)
chr5 (25-179)||(24325218-24325372)
chr5 (25-183)||(24331561-24331722)
chr5 (43-183)||(7349420-7349560)
chr5 (23-182)||(16018969-16019129)
chr5 (26-183)||(164193-164350)
chr5 (9-163)||(25000112-25000266)
chr5 (23-183)||(25000471-25000632)
chr5 (25-189)||(29454736-29454901)
chr5 (26-185)||(15371871-15372030)
chr5 (186-267)||(2591222-2591303)
chr5 (59-183)||(7348561-7348685)
chr5 (45-183)||(4623150-4623286)
chr5 (25-183)||(15709353-15709511)
chr5 (65-183)||(4222147-4222265)
chr5 (47-179)||(6019177-6019309)
chr5 (47-183)||(4219665-4219800)
chr5 (46-172)||(4624631-4624757)
chr5 (46-183)||(6018316-6018452)
chr5 (43-103)||(13814131-13814190)
chr5 (59-103)||(14462686-14462730)
chr5 (9-68)||(24325580-24325639)
chr5 (9-55)||(16752711-16752757)
chr5 (9-86)||(28495211-28495288)
chr5 (25-97)||(10721873-10721945)
chr5 (11-55)||(32305947-32305991)
[»] chr3 (61 HSPs)
chr3 (9-183)||(37726931-37727105)
chr3 (9-183)||(39555946-39556120)
chr3 (11-183)||(20840562-20840734)
chr3 (9-183)||(31779021-31779195)
chr3 (9-182)||(5136983-5137156)
chr3 (9-182)||(41046703-41046876)
chr3 (9-183)||(24300925-24301099)
chr3 (9-186)||(25853596-25853773)
chr3 (9-183)||(23644464-23644638)
chr3 (9-183)||(26837725-26837898)
chr3 (9-183)||(30104484-30104657)
chr3 (11-183)||(32535330-32535506)
chr3 (30-179)||(48452995-48453144)
chr3 (9-188)||(27393946-27394125)
chr3 (16-183)||(43973443-43973610)
chr3 (9-188)||(17464860-17465040)
chr3 (9-181)||(22425182-22425354)
chr3 (9-182)||(26274936-26275108)
chr3 (25-183)||(31778655-31778814)
chr3 (25-183)||(37727314-37727473)
chr3 (25-183)||(43973824-43973983)
chr3 (25-189)||(27393657-27393822)
chr3 (25-183)||(20840945-20841104)
chr3 (25-183)||(25853236-25853395)
chr3 (25-183)||(39555580-39555739)
chr3 (44-182)||(25612381-25612519)
chr3 (25-183)||(4275748-4275907)
chr3 (25-183)||(5137365-5137524)
chr3 (25-195)||(30098147-30098318)
chr3 (23-183)||(29801798-29801959)
chr3 (25-183)||(17464493-17464652)
chr3 (25-182)||(26837363-26837521)
chr3 (25-182)||(32534962-32535120)
chr3 (43-183)||(50116812-50116952)
chr3 (25-183)||(22424816-22424975)
chr3 (25-183)||(23644849-23645008)
chr3 (64-183)||(29801358-29801477)
chr3 (25-182)||(26274570-26274728)
chr3 (25-182)||(24300560-24300717)
chr3 (44-183)||(51474737-51474877)
chr3 (46-183)||(23228414-23228550)
chr3 (47-183)||(45965940-45966076)
chr3 (45-183)||(32697106-32697243)
chr3 (25-182)||(41047083-41047239)
chr3 (41-186)||(25420542-25420687)
chr3 (71-183)||(51473430-51473542)
chr3 (44-183)||(37220559-37220698)
chr3 (57-166)||(18010162-18010271)
chr3 (44-179)||(25419150-25419285)
chr3 (43-107)||(23227334-23227398)
chr3 (99-183)||(37222030-37222114)
chr3 (8-55)||(49407925-49407972)
chr3 (9-80)||(55192222-55192293)
chr3 (9-69)||(29801532-29801592)
chr3 (9-92)||(37075781-37075864)
chr3 (9-183)||(27200062-27200235)
chr3 (9-186)||(36701466-36701643)
chr3 (9-194)||(50900898-50901082)
chr3 (15-49)||(33412383-33412417)
chr3 (9-49)||(27199838-27199878)
chr3 (58-182)||(32695706-32695830)
[»] chr1 (46 HSPs)
chr1 (9-183)||(18984121-18984295)
chr1 (9-183)||(50970647-50970821)
chr1 (9-182)||(15173099-15173272)
chr1 (9-193)||(29869612-29869796)
chr1 (9-182)||(5962947-5963120)
chr1 (9-185)||(33144288-33144464)
chr1 (16-183)||(5540194-5540361)
chr1 (16-191)||(15646571-15646746)
chr1 (16-183)||(29306955-29307122)
chr1 (9-183)||(21856412-21856586)
chr1 (9-183)||(8678911-8679084)
chr1 (9-183)||(9018975-9019149)
chr1 (9-183)||(17433218-17433392)
chr1 (9-186)||(39154018-39154195)
chr1 (11-183)||(26859431-26859602)
chr1 (16-183)||(29307317-29307485)
chr1 (25-186)||(21856041-21856203)
chr1 (23-186)||(17433597-17433761)
chr1 (25-183)||(8678543-8678702)
chr1 (25-183)||(39154404-39154563)
chr1 (27-183)||(50970280-50970437)
chr1 (25-183)||(5539818-5539977)
chr1 (25-183)||(29870003-29870162)
chr1 (26-183)||(4636356-4636514)
chr1 (25-189)||(18984503-18984668)
chr1 (25-177)||(33143925-33144078)
chr1 (25-183)||(15173478-15173636)
chr1 (16-183)||(9019338-9019506)
chr1 (25-183)||(15646194-15646353)
chr1 (45-190)||(52268285-52268430)
chr1 (68-183)||(26859061-26859176)
chr1 (11-112)||(4636045-4636146)
chr1 (25-183)||(5962580-5962739)
chr1 (69-186)||(52269177-52269294)
chr1 (25-183)||(17112284-17112442)
chr1 (110-193)||(47826956-47827039)
chr1 (99-183)||(2733416-2733500)
chr1 (85-177)||(47827033-47827125)
chr1 (15-49)||(17088516-17088550)
chr1 (9-182)||(39485068-39485240)
chr1 (9-92)||(17088243-17088326)
chr1 (58-145)||(39843193-39843280)
chr1 (9-86)||(9833522-9833599)
chr1 (9-106)||(29020959-29021056)
chr1 (104-149)||(50419725-50419770)
chr1 (45-149)||(52235074-52235178)
[»] chr4 (61 HSPs)
chr4 (9-189)||(33109680-33109860)
chr4 (9-187)||(46193774-46193952)
chr4 (9-194)||(4219548-4219733)
chr4 (9-188)||(15523603-15523782)
chr4 (9-183)||(12234331-12234505)
chr4 (16-186)||(38962195-38962365)
chr4 (9-183)||(11153516-11153690)
chr4 (15-183)||(25447611-25447779)
chr4 (9-187)||(23494441-23494619)
chr4 (9-183)||(25937672-25937846)
chr4 (9-183)||(51020799-51020973)
chr4 (9-182)||(22434547-22434718)
chr4 (9-183)||(22170306-22170479)
chr4 (9-182)||(45082435-45082606)
chr4 (9-183)||(48526198-48526371)
chr4 (9-182)||(2118665-2118837)
chr4 (9-182)||(54995437-54995609)
chr4 (25-183)||(22434181-22434340)
chr4 (25-183)||(45082808-45082967)
chr4 (23-183)||(46193407-46193568)
chr4 (25-183)||(25447249-25447408)
chr4 (26-183)||(15523237-15523395)
chr4 (25-182)||(48526565-48526723)
chr4 (9-116)||(12503805-12503912)
chr4 (69-183)||(23494872-23494986)
chr4 (25-187)||(2118291-2118454)
chr4 (25-183)||(11153148-11153307)
chr4 (25-183)||(12234713-12234872)
chr4 (25-183)||(20470895-20471054)
chr4 (25-182)||(4219943-4220101)
chr4 (25-182)||(54995072-54995230)
chr4 (59-183)||(33109883-33110007)
chr4 (26-194)||(25938056-25938225)
chr4 (25-183)||(51021180-51021338)
chr4 (25-182)||(18751602-18751760)
chr4 (44-183)||(48293596-48293735)
chr4 (43-183)||(20958264-20958402)
chr4 (71-186)||(18763951-18764066)
chr4 (49-182)||(16690939-16691072)
chr4 (25-168)||(12503453-12503597)
chr4 (44-183)||(44892552-44892691)
chr4 (68-183)||(35363028-35363144)
chr4 (44-183)||(48294946-48295086)
chr4 (47-178)||(20957196-20957327)
chr4 (44-167)||(43243685-43243807)
chr4 (43-182)||(48713749-48713888)
chr4 (49-183)||(48708297-48708431)
chr4 (47-167)||(43281198-43281317)
chr4 (44-183)||(44890519-44890658)
chr4 (49-183)||(16691481-16691614)
chr4 (59-188)||(10258306-10258435)
chr4 (9-76)||(18751971-18752038)
chr4 (9-192)||(17503967-17504149)
chr4 (44-127)||(43242328-43242411)
chr4 (120-183)||(16318256-16318319)
chr4 (9-49)||(17504329-17504369)
chr4 (9-49)||(35193443-35193483)
chr4 (44-116)||(44220781-44220853)
chr4 (77-183)||(55189530-55189636)
chr4 (9-42)||(40160236-40160269)
chr4 (103-183)||(35193766-35193846)
[»] chr2 (37 HSPs)
chr2 (11-182)||(11090524-11090695)
chr2 (9-197)||(26538085-26538273)
chr2 (12-182)||(14432145-14432315)
chr2 (9-189)||(40027136-40027316)
chr2 (9-183)||(239355-239528)
chr2 (9-182)||(40815714-40815887)
chr2 (9-183)||(18451200-18451374)
chr2 (9-183)||(22374322-22374496)
chr2 (9-183)||(1978110-1978284)
chr2 (16-182)||(8425736-8425902)
chr2 (9-183)||(43058335-43058509)
chr2 (11-183)||(28616615-28616788)
chr2 (9-179)||(3025472-3025641)
chr2 (16-183)||(26538454-26538622)
chr2 (11-183)||(7446344-7446519)
chr2 (25-183)||(7446730-7446889)
chr2 (25-183)||(40815347-40815506)
chr2 (44-183)||(20444751-20444890)
chr2 (25-183)||(18450832-18450991)
chr2 (43-186)||(15551498-15551641)
chr2 (25-183)||(22374709-22374868)
chr2 (25-182)||(40027524-40027682)
chr2 (68-183)||(28847123-28847238)
chr2 (44-183)||(35779710-35779849)
chr2 (44-183)||(35781067-35781206)
chr2 (25-193)||(28616998-28617167)
chr2 (25-183)||(239736-239895)
chr2 (25-183)||(11090904-11091063)
chr2 (44-183)||(20440436-20440574)
chr2 (25-183)||(43058717-43058875)
chr2 (26-183)||(3025848-3026004)
chr2 (44-185)||(8972237-8972378)
chr2 (59-183)||(1978528-1978652)
chr2 (26-182)||(8425358-8425514)
chr2 (25-183)||(14432525-14432684)
chr2 (45-185)||(15552459-15552598)
chr2 (9-183)||(28143400-28143573)
[»] scaffold0295 (2 HSPs)
scaffold0295 (9-183)||(4795-4969)
scaffold0295 (25-185)||(5179-5336)
[»] scaffold0273 (2 HSPs)
scaffold0273 (9-183)||(4576-4750)
scaffold0273 (25-146)||(4242-4364)
[»] scaffold0007 (3 HSPs)
scaffold0007 (9-191)||(64296-64478)
scaffold0007 (70-182)||(64735-64847)
scaffold0007 (9-190)||(205738-205918)
[»] chr8 (33 HSPs)
chr8 (9-183)||(19176659-19176833)
chr8 (9-194)||(9930026-9930211)
chr8 (9-192)||(12571856-12572040)
chr8 (12-183)||(41681136-41681306)
chr8 (9-183)||(44831614-44831788)
chr8 (9-182)||(33328161-33328334)
chr8 (9-181)||(13224645-13224816)
chr8 (9-183)||(31133222-31133396)
chr8 (11-183)||(11656457-11656630)
chr8 (9-183)||(9178005-9178178)
chr8 (25-183)||(13225023-13225182)
chr8 (25-182)||(9928912-9929070)
chr8 (25-183)||(19176292-19176451)
chr8 (25-189)||(44831243-44831408)
chr8 (9-182)||(4630161-4630328)
chr8 (25-194)||(11656841-11657011)
chr8 (25-182)||(12572235-12572393)
chr8 (27-183)||(34540934-34541091)
chr8 (25-183)||(33328524-33328683)
chr8 (11-138)||(33743290-33743417)
chr8 (25-183)||(41681518-41681677)
chr8 (26-183)||(31133605-31133763)
chr8 (25-183)||(33742924-33743082)
chr8 (31-183)||(4629799-4629952)
chr8 (77-183)||(11336959-11337065)
chr8 (47-182)||(10918129-10918264)
chr8 (44-106)||(43958264-43958326)
chr8 (44-183)||(8073956-8074094)
chr8 (25-93)||(9177724-9177793)
chr8 (10-55)||(18805292-18805337)
chr8 (154-194)||(10919700-10919740)
chr8 (153-183)||(9177669-9177699)
chr8 (140-186)||(43958208-43958254)
[»] scaffold0951 (2 HSPs)
scaffold0951 (11-183)||(1669-1841)
scaffold0951 (25-183)||(2051-2210)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-183)||(134042-134216)
[»] scaffold1223 (2 HSPs)
scaffold1223 (9-186)||(752-928)
scaffold1223 (16-183)||(1116-1284)
[»] scaffold0432 (2 HSPs)
scaffold0432 (9-182)||(10242-10414)
scaffold0432 (78-187)||(9930-10039)
[»] scaffold0027 (2 HSPs)
scaffold0027 (9-183)||(42528-42701)
scaffold0027 (16-182)||(42172-42339)
[»] scaffold0417 (2 HSPs)
scaffold0417 (9-166)||(10640-10797)
scaffold0417 (25-183)||(11007-11166)
[»] scaffold0176 (2 HSPs)
scaffold0176 (18-193)||(18827-19001)
scaffold0176 (88-183)||(19069-19164)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-116)||(16565-16672)
scaffold0157 (25-168)||(16880-17024)
[»] scaffold0113 (1 HSPs)
scaffold0113 (59-181)||(28662-28784)
[»] scaffold0057 (2 HSPs)
scaffold0057 (44-182)||(61862-62000)
scaffold0057 (111-183)||(61030-61102)
[»] scaffold1585 (1 HSPs)
scaffold1585 (43-183)||(569-709)
[»] scaffold0076 (1 HSPs)
scaffold0076 (82-182)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (44-181)||(454-589)
[»] scaffold0168 (1 HSPs)
scaffold0168 (43-136)||(7691-7784)


Alignment Details
Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 37786943 - 37786758
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
    |||||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| ||| ||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctttatttta 37786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 19830596 - 19830423
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19830423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 19590701 - 19590527
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 19590527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 32004985 - 32005157
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaag 32005157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 38858819 - 38858633
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaattttac 195  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| |||||| ||| |||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctttattttac 38858633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 4641616 - 4641443
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||||| ||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 29100220 - 29100393
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 35289272 - 35289444
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| | |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaag 35289444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 2659211 - 2659383
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| | ||||||||||||| |||||||||| ||| ||  ||||||| |||||||||||| ||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaag 2659383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 34534162 - 34534334
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| | ||||||| |||||||| ||||||||||||||  |||||||||||| ||||||||| ||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaag 34534334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 23953105 - 23953268
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 23953204  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
    | | |||| ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  23953205 tctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 19590909 - 19591068
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaag 19591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 4478076 - 4478242
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||  | || |    
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttat 4478175  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    | | |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||| ||||    
T  4478176 tctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaa 4478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 2659000 - 2658841
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| |||||||||||||||||||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaag 2658841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 38859025 - 38859184
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 38859184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 32004774 - 32004616
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||||||||||||||||||| |||||  | ||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||| || |||||||||||  |||||||||||||||||||||||||||||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 32004616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 37787153 - 37787310
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaa 125  Q
    ||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| |  |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  126 aagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||| |||||||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaag 37787310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 19830804 - 19830962
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| |||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 19830962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 47 - 183
Target Start/End: Complemental strand, 28583577 - 28583441
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||| |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||  |||||||||||||||||||||||||||||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaag 28583441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 34533952 - 34533793
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| ||||||||||||||||||||||||  | ||||| || ||||||||| |||||||||||||||||||||||||| |||| |||| || | ||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgtttt 34533853  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| ||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34533852 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 34533793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 35289063 - 35288905
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    ||||||||||||||||||| |||| |||||  | |||||  |  |||||||||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  35289063 taaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 35288964  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||||||  |||||| |||| |||||||||||||||||||    
T  35288963 aaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaag 35288905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 29100011 - 29099863
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||| ||| ||||| ||| |  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaa 172  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 38161093 - 38160953
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||  ||||||| | ||||||||||||||||  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  ||||||| |||||||||||||||||||||||    
T  38160993 cgtgagtaggccaaaacccgaggaccaaaagtgtaattaag 38160953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| ||||||||||   |||||||  ||||||||||||||||||||||||||||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 23952892 - 23952732
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| ||| |  | ||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||| | ||||    
T  23952892 ctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtttt 23952793  T
Q  124 aaaagggcaggaccagtttcgtgagta-aaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| ||||| |||||||||||    ||||||||||||||||||||||||||||||    
T  23952792 aaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaag 23952732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 28584326 - 28584465
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||| | |||||||||| || ||||| ||||    
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| ||  ||||| ||||||||| |||||||||||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaag 28584465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 35579256 - 35579429
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| ||||| |||||||||| |||   ||||| || |||| ||| |||| ||||| ||| |||||| ||  |||||     
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 35579354  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  |||| |||  ||||  | || |||||||||   | |||||  |||||| ||||||||||||||||    
T  35579355 gttttgtttgatttgaaagaggcataatcattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaag 35579429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgttttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 35579074 - 35579028
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggag 35579028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 26026688 - 26026734
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggag 26026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 48247767 - 48247721
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggag 48247721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 9393894 - 9393734
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaa 125  Q
    ||||||||||||||| ||| |||| |||||   ||||| || |||||||| ||||  |||| ||| |||||| || | |||| ||||||||  |||| ||    
T  9393894 taaaactgtcatttcactgtgtttctggagttgaaaataggaggtaggactaaaacagcaaaaaacatgatagttta-ggacggttttgttcgatttgaa 9393796  T
Q  126 aagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtctt 187  Q
    |  |||| ||| | |||||||||   | |||||  |||||| ||||||||||||||||||||    
T  9393795 agaggcaagacaattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaagtctt 9393734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 34594628 - 34594576
Alignment:
Q  140 tttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaattt 192  Q
    |||||||||| |  |||||  ||||||||||||||||||||||||||| ||||    
T  34594628 tttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaagtctttattt 34594576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 3e-82; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 11276951 - 11277125
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 11277125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 10900299 - 10900473
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaag 10900473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 18257313 - 18257139
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaag 18257139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 20741276 - 20741102
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 20741102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 15828010 - 15828184
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||| | |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 15828184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 1149802 - 1149975
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttt-tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  110 ttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| ||||||||||||||| |||||||||| ||||||  | |||||||||||||||||||||||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaag 1149975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 12935528 - 12935700
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| | ||||| || ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaag 12935700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 18505288 - 18505462
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||| | |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaag 18505462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 31470685 - 31470859
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||| ||||||||||||||||  | ||||||| |||||||||||||||||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaag 31470859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 11445163 - 11444989
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     |||| || | ||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 11444989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 28472812 - 28472639
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||| |||||||||| ||||||||||   |||||||||||||||||||||||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaag 28472639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 29860001 - 29859828
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||| |||||||||| ||||||||||   |||||||||||||||||||||||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaag 29859828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 2319832 - 2319674
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 2319674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgtttt-ggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | |||||||| |||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 10900010  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    || | |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  10900009 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 12935318 - 12935159
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 12935159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 4811535 - 4811374
Alignment:
Q  22 ggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||| ||||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaag 4811374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 23074164 - 23074001
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatg-----------ataattgaaggacc 23074076  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 23074001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 11445371 - 11445541
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| || |||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaatttta 11445541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 22219737 - 22219896
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 22219896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 23075512 - 23075671
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| |||||||||  ||||| | || ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 23075671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 11276760 - 11276592
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||| |||||||||||||||||||||||||||||||  | ||||| || |||||||||||||||| ||||||||||| |||||||||||| |||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttg 11276661  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    || | ||||||||||| |||| ||||||| |||||| ||||||||||| |||| ||| |||||||||||    
T  11276660 ttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaag 11276592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 15827794 - 15827640
Alignment:
Q  32 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt--tttgttatattttaaaag 128  Q
    |||||||| ||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||||||||||  |||||||| |||||||||    
T  15827794 tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaag 15827695  T
Q  129 ggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15827694 gacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 15827640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18505080 - 18504922
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||| | ||| | |||  | ||||| || |||||||||||||||| |||||||||||||||||||| ||||||||||| | ||||    
T  18505080 ctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgtttt 18504981  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  18504980 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 31470476 - 31470306
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||| ||||||||| ||| |||||||| | ||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
    ||||| ||| |||||||||||||||||  |||||||||||||| |||||||||||||||| ||||| ||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccttaagttta 31470306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 20741485 - 20741647
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa---atgataattgaaggaccgttttgttatat 120  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||| ||||   ||||||||||||||||||||||||| | |    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  121 tttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaag 20741647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 29033577 - 29033432
Alignment:
Q  43 tgcgtttttggag-aataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtt 141  Q
    ||||||||||||| || |||||||||||||||| ||||  ||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  142 tcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtctt 187  Q
    ||||||| |  |||||| ||||||||||||||||||||||||||||    
T  29033477 tcgtgagcaggccaaaatacgaggaccaaaagtgtaattaagtctt 29033432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 18257565 - 18257680
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggac 167  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||   ||||||||||||||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  168 caaaagtgtaattaag 183  Q
    ||||||| ||||||||    
T  18257665 caaaagtataattaag 18257680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 29035040 - 29035182
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | ||||||| |||| ||||||||||||||||||||||||||| | ||||||  ||||||| | |||||||||||||  |||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtc 185  Q
    ||||||||  | ||||||||||||| |||||||||||||||||    
T  29035140 cgtgagtaggctaaaacacgaggacgaaaagtgtaattaagtc 29035182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 3835135 - 3835268
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||| | |||||||  |||||||||| |||||||||    
T  3835135 tttggaggataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgag 3835234  T
Q  149 taaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||   ||||||||  |||||||||||||||||||    
T  3835235 taggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 18296285 - 18296147
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||  | || |||     
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  |||||||||||||| |||| | ||||||||    
T  18296186 gtgagtaagtcaaaacacgaggactaaaattataattaag 18296147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 4811675 - 4811799
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| || |||| || ||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||| || ||||||| ||||||  ||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  159 cacgaggaccaaaagtgtaattaag 183  Q
    |||||||| ||||||| ||||||||    
T  4811775 cacgaggatcaaaagtataattaag 4811799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 1149553 - 1149467
Alignment:
Q  97 aattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaag 1149467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 35163557 - 35163639
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 92  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||   ||||| || |||||||| |||| ||||| |||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 22534214 - 22534268
Alignment:
Q  129 ggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||| ||||||||||    ||||| ||||||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaag 22534268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 32836367 - 32836407
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  32836367 agcataaggggtaggtctaaaactgttatttctcttcgttt 32836407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 19359312 - 19359138
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaag 19359138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 2865124 - 2865298
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 2865298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 18183338 - 18183512
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 18183512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 5819298 - 5819472
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 5819472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 8647614 - 8647440
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 8647440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 29455111 - 29455294
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaattt 192  Q
     ||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagccttaattt 29455294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 24362205 - 24362379
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| || | |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaag 24362379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 15709146 - 15708963
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttt 193  Q
    |||||||| | |||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||||||||| || ||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcctaaatttt 15708963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 8461106 - 8460932
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||| |||| ||||||||||| |||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaag 8460932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 14215616 - 14215786
Alignment:
Q  13 tagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttt 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  113 tgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| | |||||||||||||||| ||||||||||||||   ||||||||||||||||||| ||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaag 14215786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 15372242 - 15372415
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||  |||| || ||||||||||||||||||||| ||||||||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 164560 - 164734
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||| ||||||||| ||||||   |||||||| ||||| ||||| | ||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaag 164734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 14463901 - 14464063
Alignment:
Q  20 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttata 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||||| ||    
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggg-taggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  120 ttttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||| ||  |  |||||||||||||  ||||||||||||||| |||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaag 14464063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 5819090 - 5818932
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18183131 - 18182973
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| | |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 18182973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 2864915 - 2864754
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtc 185  Q
    ||||||||| || || |||||||||||  ||||||||| |||||||||||||||||||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagtc 2864754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 24331929 - 24332110
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacg-aaaaatgcaac-aaaaatgataattgaagga 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  107 ccgttttgttatatttt-aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc-aaaagtgtaattaagtct 186  Q
    |||||||||| | |||| |||| ||||||| ||||||||||||||  |||||||| || |||| ||||||||||||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaagtct 24332110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 8647822 - 8647981
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| |  |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 8647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 19359520 - 19359679
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgtttt 19359619  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  19359620 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 19359679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 16018763 - 16018591
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| ||||||||||||||| || || |||||||| ||  ||||||||||| |||||||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 16018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 14215402 - 14215242
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagt 184  Q
    ||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagt 14215242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | |||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
     ||||||| || |||||||||| |||  |||||||| | ||||||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 8461315 - 8461480
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || |||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgtttt 8461414  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaa 189  Q
    ||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  8461415 aaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttaa 8461480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| | |||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
     ||||||| || |||||||||| |||  |||||||| | ||||||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 24331722 - 24331561
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaat--gataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||| |||||||||||||||||   ||||||||||||||||||||||| | ||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 24331561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 7349420 - 7349560
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||| |||||||  |||||||| | ||||||||| ||||||||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  7349520 cgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 7349560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 16018969 - 16019129
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||||||||||||||||| |||||  ||||| | || ||||||||||||||| ||||||||||||||||||||| ||| |||| || ||||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||| ||||||||| |||||||||||  |||||||| |||||||||||||||||||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaa 16019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 164350 - 164193
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    ||||| |||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||| |||||||||||| | || ||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttata 164252  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  164251 aaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaag 164193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacga 163  Q
     |||| || | |||||| |||||| |||||  ||||||||||  |||||||||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 25000471 - 25000632
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    |||||||||||||||||||||||||||||||||  | ||||| || ||| |||||||||||||||||||||||||||||||| |||| ||||||| | ||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||  || ||||| |||||||||||  |||||||| || |||||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaag 25000632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 29454901 - 29454736
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || |||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaa 189  Q
    ||||||||| ||||| |||||||||||  ||||||||| | ||||||||||| ||||||| |||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagccttaa 29454736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 15372030 - 15371871
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaata-aaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    ||||||| |||||||||||||||| | |||  |  |||| || ||| ||||||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  15372030 taaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 15371931  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtc 185  Q
    ||||||||||||||  |||||||||| ||||||| ||||||| ||||||||||||||||||    
T  15371930 aaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaaagtgtaattaagtc 15371871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 2591303 - 2591222
Alignment:
Q  186 ttaattttacaatattgagctaataatatcatgtagctaggcttagctagtattcacaaatatatttctagtccatttcttt 267  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2591303 ttaattttacaatattgagctaataatatcatgtagctaggcctagctagtattcacaaatatatttctagtccatttcttt 2591222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 183
Target Start/End: Complemental strand, 7348685 - 7348561
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    |||||||||||||||||||||| |||||||||||||||||  ||||||  |||||||| | ||||||||||||| ||||| ||||||||||| || ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  159 cacgaggaccaaaagtgtaattaag 183  Q
    || ||||||||||| ||||||||||    
T  7348585 catgaggaccaaaaatgtaattaag 7348561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 4623286 - 4623150
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| |||||||||||  ||||||| ||||||| | ||||||||||||||||||||  ||||||| | |||||||  |||||||||| |||||    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  145 tgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||  |||||||||| |||||||||||||||||||    
T  4623188 tgagtaagtcaaaacacgatgaccaaaagtgtaattaag 4623150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 15709353 - 15709511
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||||| || |||||  | ||||| || ||||||||||||||||||||| ||||||||| | ||||||||||||||| | ||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     |||||||| ||| |||||| ||||||  ||||||||| | |||||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaag 15709511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 183
Target Start/End: Original strand, 4222147 - 4222265
Alignment:
Q  65 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgag 164  Q
    |||||||||||||||||||||| ||||||||||| |||| |||  ||||||| | ||||||||||||| ||||| ||||||||| |  ||||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  165 gaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||    
T  4222247 gaccaaaagtgtaattaag 4222265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 6019177 - 6019309
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||||||||||| || ||| |||||||| | ||||||||| ||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  146 gagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
    |||| | |||||||| || |||||||| ||||||    
T  6019277 gagt-agccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 183
Target Start/End: Complemental strand, 4219800 - 4219665
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| | ||||||   |||||| | |||||||| |||| ||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    | ||  |||||||||||||| ||||||||||||||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaag 4219665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 4624631 - 4624757
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||| |||||||  | || ||||| ||||||    
T  4624631 gtttttgaaggataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgt 4624730  T
Q  146 gagtaaaccaaaacacgaggaccaaaa 172  Q
    |||||    ||||||||||||| ||||    
T  4624731 gagtaggttaaaacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 6018452 - 6018316
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    ||||||||||   ||||| | ||||||||| |||| ||||||||||||||||||||||| |   ||||||| | |||||||||| || ||||||||||||    
T  6018452 gtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgt 6018354  T
Q  146 gagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| | ||||||||||| ||||||| ||||||||||    
T  6018353 gagtagaacaaaacacgagaaccaaaaatgtaattaag 6018316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 13814131 - 13814190
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaa 103  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  13814131 tgcgtttttggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 14462730 - 14462686
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaa 103  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 24325580 - 24325639
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg 68  Q
    |||||||||| || ||||||||||||||||||||||   || ||||||||||||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggagaataaaatggggg 24325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 16752757 - 16752711
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggag 16752711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 28495211 - 28495288
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 86  Q
    |||||| | ||||||||||||||| ||||||||||||| || |||||   ||||| || |||||||| |||| |||||    
T  28495211 agcatatgaggtaggtctaaaactatcatttctctgcggttctggagttgaaaataggaggtaggactaaaactgcaa 28495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 10721945 - 10721873
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgata 97  Q
    ||||||||||||||||||| ||||| |||||   ||||| || |||||||| |||| ||||| ||| ||||||    
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgata 10721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 32305991 - 32305947
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||| ||||| |||||||||||||||||||||| |||| |||||    
T  32305991 catagcgggtaagtctaaaactgtcatttctctgtgtttctggag 32305947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 3e-82; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 37727105 - 37726931
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||| |||||||||||||| ||||||||||| || | ||||||||||||||||||||||||||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaag 37726931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 39555946 - 39556120
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 39556120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 20840734 - 20840562
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 20840562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 31779021 - 31779195
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 31779195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 5137156 - 5136983
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | ||||||||||||| ||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | ||||||||||||| |||||||||||| | ||  ||||||||||||||||||||||||||||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 24300925 - 24301099
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 24301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 25853596 - 25853773
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
     ||||||| | |||||||| | || ||||||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaagtct 25853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 23644638 - 23644464
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||| |||||||||| |||||||||||  |||||| ||||||||||||||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaag 23644464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 26837725 - 26837898
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| |||||| ||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaag 26837898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 30104657 - 30104484
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||| | || | ||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaag 30104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 32535330 - 32535506
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaat-----gataattgaagg 105  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     ||||||||||||    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  106 accgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 32535506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 48453144 - 48452995
Alignment:
Q  30 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |    
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatg 48453045  T
Q  130 gcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  48453044 gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaat 48452995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 27393946 - 27394125
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtctta 188  Q
    |||||||| | |||||||| |||||||||  |||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctta 27394125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 43973610 - 43973443
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 43973511  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    | | |||||||||||||  | || |||||||||||   ||||||||||||||||||||||||||||||    
T  43973510 tctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaag 43973443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 17464860 - 17465040
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattgaaggac 107  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  108 cgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtctta 188  Q
    ||||||||| |||||||||||||   |||||||||| || |||  |||||||||||||||||||| |||||||||| ||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcctta 17465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaatta 181  Q
    |||||||| | ||||| ||||||| |||||| ||||||||||  || ||||||||||||||||||||||||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 26274936 - 26275108
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| || | ||||||||||| |||||||||||||||||||   |||||||| ||| |||||| | |||||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 31778814 - 31778655
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||  |||||||||||||||| | ||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaag 31778655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 37727314 - 37727473
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaag 37727473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 43973824 - 43973983
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| | || ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 43973983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 27393822 - 27393657
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| |  | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaa 189  Q
    |||| |||||||||||||| |||||||   |||||||||||||||||||||||||||||| |||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccttaa 27393657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 20840945 - 20841104
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaag 20841104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 25853395 - 25853236
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 25853236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 39555739 - 39555580
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 39555580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 25612381 - 25612519
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||||||||| ||||    
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||   |||||||||||||||||||||||||||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 4275748 - 4275907
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| ||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 4275907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 5137365 - 5137524
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaag 5137524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 30098147 - 30098318
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||| ||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 30098246  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaattttac 195  Q
    ||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||| |||| ||||||    
T  30098247 aaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccttatttttac 30098318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 29801798 - 29801959
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    |||||||| |||||||||||||||||| |||||  | ||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||| | ||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaag 29801959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 17464652 - 17464493
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||| | ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 17464553  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| ||||||||||| || ||  |||||||||||||||||||||||||||||||    
T  17464552 aaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaag 17464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 26837521 - 26837363
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||| || |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||| |||||||||||  |||||| || |||||||||| |||||||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaa 26837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 32535120 - 32534962
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||| | || | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  32535120 ctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 32535021  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  32535020 aaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 50116812 - 50116952
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| | ||| ||||||||| ||||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||  ||||||||||||| ||||||||||||||||    
T  50116912 cgtgagtaagtcaaaacacgaggatcaaaagtgtaattaag 50116952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 22424975 - 22424816
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| ||| ||||||||||| ||||  |  ||||||||| ||||||||||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaag 22424816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 23644849 - 23645008
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||  | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| ||||||| |||||||||||  |||||||||||||||||||||| ||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaag 23645008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 29801477 - 29801358
Alignment:
Q  64 ggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacga 163  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||  |||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  164 ggaccaaaagtgtaattaag 183  Q
     |||||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaag 29801358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 26274728 - 26274570
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||  |||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26274629  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||||  |||||| || |||| ||||| |||||||||    
T  26274628 aaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 24300717 - 24300560
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||| ||||||||| ||||||||||||||||||||||| |||||||| || | ||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| ||||||||||||||||| ||| ||||||||||| |||||||| |||||||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 51474737 - 51474877
Alignment:
Q  44 gcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||| | ||||||  ||||||||| ||||||||||||| ||||| |||    
T  51474737 gcgtttttggaggataaaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaattt 51474836  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  |||||||||| | ||||||||||||||||||    
T  51474837 cgtgagtatgccaaaacacgggaaccaaaagtgtaattaag 51474877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 23228414 - 23228550
Alignment:
Q  46 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||  |||||||   ||||||||||||| || || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgtt-cgttttaaaagggcatgatcattttcgt 23228512  T
Q  146 gagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||  |||||||||| ||||||||||||||||||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaag 23228550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 183
Target Start/End: Complemental strand, 45966076 - 45965940
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| | |||||||||| ||| ||||||||||||||| |||||||||| |||||||  ||||||||| ||||||||| ||||||  |  ||||||    
T  45966076 tttttggaggagaaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtg 45965977  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||  |||||||||||||||||||||||||||||||    
T  45965976 agtatgccaaaacacgaggaccaaaagtgtaattaag 45965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 32697106 - 32697243
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||| | ||||||||||||  ||| | |||||    
T  32697106 cgtttttggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  145 tgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||  | |||||||||||||||||| | ||||||||    
T  32697205 tgagtaggctaaaacacgaggaccaaaaatataattaag 32697243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 41047083 - 41047239
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||| |||||| || | ||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgtttt 41047181  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| ||| ||||||||||||||||  |||||||| || || | |||||||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 25420542 - 25420687
Alignment:
Q  41 tctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagt 140  Q
    ||||| |||||| || ||||||||||||||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||||||||  || || |    
T  25420542 tctgcatttttgaaggataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaat 25420641  T
Q  141 ttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
    ||||||||||   ||||| |||| || |||||||||||||||||||    
T  25420642 ttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaagtct 25420687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 51473542 - 51473430
Alignment:
Q  71 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaa 170  Q
    ||||| |||| |||||||||||||||||  |||||||  ||||||| | ||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  171 aagtgtaattaag 183  Q
    |||||||||||||    
T  51473442 aagtgtaattaag 51473430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 37220698 - 37220559
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||||  |||| || | ||||||||| ||| || |  | |     
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||  |||||| ||||||||||||||||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaag 37220559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 18010162 - 18010271
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaa 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||  ||  ||||||| | |||||||||||| | |||| ||||||||||| || ||    
T  18010162 ataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaa 18010261  T
Q  157 aacacgagga 166  Q
    |||| |||||    
T  18010262 aacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 25419285 - 25419150
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaa-ggaccgttttgttatattttaaaagggcaggaccagtt 141  Q
    ||||||||||||  |||||||||||  ||||| |||| ||||| ||||| ||||||||||| |||| |||||||| | |||||||||||||| || | ||    
T  25419285 gcgtttttggag--taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatt 25419188  T
Q  142 tcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
    |||||||||| | ||||||||| |||||||||| ||||    
T  25419187 tcgtgagtaagctaaaacacgaagaccaaaagtataat 25419150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 23227398 - 23227334
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggac 107  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||| |||||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggac 23227334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 37222030 - 37222114
Alignment:
Q  99 ttgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  |||||||| | |||||||| |||||||||| ||| |||||||   ||||||||||||||||||||||||||||||    
T  37222030 ttgaaggatggttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaag 37222114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 49407972 - 49407925
Alignment:
Q  8 tagcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggag 49407925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 55192293 - 55192222
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaa 80  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||| ||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaa 55192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggg 69  Q
    |||||| | |||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 37075864 - 37075781
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 92  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||   |||||  | |||||||| |||| ||||| |||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggagttgaaaataagaggtaggactaaaactgcaaaaaaaa 37075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 27200062 - 27200235
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||   ||||| || |||| ||| |||| ||||| ||| |||||| ||  |||||     
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 27200160  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    || |||||  |||| |||  ||||| |||| |||||||||     |||||  | |||||||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaag 27200235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 36701466 - 36701643
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||||| ||||||| || |||| |||||   ||||| || |||| ||| |||| ||||| ||| |||||| || | |||      
T  36701466 agcatatggggtaggtctaaaactgccatttctatgtgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagggatg 36701565  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
     |||||||  |||| |||  | || ||||| |||||||||     |||||  ||||||||||||||||||||||||||    
T  36701566 attttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagtct 36701643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 50900898 - 50901082
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| ||||||||||  |||||| ||||||| |||||   ||||| || |||||||| |||| ||||| ||| || ||| || | ||||     
T  50900898 agcatagggggtagatctaaaactgcaatttctttgcgtttatggagttgaaaataggaggtaggacaaaaactgcaaaaaacat-atagtttagggacg 50900996  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
    ||||||||  ||||  ||  |||||| ||| ||| |||||     |||||  ||||||||||||||||||||||| || |||||||    
T  50900997 gttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcctaaatttta 50901082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 33412383 - 33412417
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||| ||||||||||||||||    
T  33412383 gggggtaggtctaaaactatcatttctctgcgttt 33412417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 27199878 - 27199838
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||  |||| |||||||||    
T  27199878 agcatagggggtaggtctaaaactgatatttatctgcgttt 27199838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 32695830 - 32695706
Alignment:
Q  58 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaa 157  Q
    ||||||| |||  ||||| |||| |||||||||||| ||||| | |||||  ||||||| | |||||||| | ||  | || |||||| ||||  |||||    
T  32695830 taaaatgagggtaaggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaa 32695731  T
Q  158 acacgaggaccaaaagtgtaattaa 182  Q
    | | ||||||||||| |||||||||    
T  32695730 atatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 18984295 - 18984121
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 18984121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 50970647 - 50970821
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaag 50970821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||  |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 29869796 - 29869612
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttt 193  Q
    |||||||| | ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| |||| ||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccttattttt 29869612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 5962947 - 5963120
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| ||||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 33144288 - 33144464
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtc 185  Q
     ||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagtc 33144464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 5540194 - 5540361
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttct 5540293  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    | | |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  5540294 tctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 5540361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 15646571 - 15646746
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 15646670  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatt 191  Q
    | | ||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  15646671 tctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttaatt 15646746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 29307122 - 29306955
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 29307023  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    | | |||||||||| || |||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  29307022 tctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaag 29306955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 21856412 - 21856586
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||| ||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaag 21856586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 8678911 - 8679084
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 8679084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 9019149 - 9018975
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| ||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaag 9018975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 17433392 - 17433218
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||| |  ||||||| ||||||  |||||||| ||||||||||||||||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaag 17433218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 39154195 - 39154018
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
    |||||||| | ||||||||||||| || ||||||||||||||  |||||||| || ||||||||||||||||||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaagtct 39154018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 26859431 - 26859602
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||| | ||||||||||||||||  |||||||||||||  |||||||||||||| ||||||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaag 26859602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 29307317 - 29307485
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 29307416  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    || | |||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||    
T  29307417 ttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaag 29307485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 21856203 - 21856041
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagtct 21856041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 17433597 - 17433761
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaagtct 17433761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 8678702 - 8678543
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||| ||||||| || ||  | ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  8678702 ctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 8678603  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  8678602 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 8678543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 39154404 - 39154563
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgtttt 39154503  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  39154504 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 39154563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 50970437 - 50970280
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaa 125  Q
    ||||||||||||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  126 aagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 50970280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 5539977 - 5539818
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||| ||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||    
T  5539977 ctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 5539878  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  5539877 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 5539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 29870003 - 29870162
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |  ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaag 29870162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 4636356 - 4636514
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||||||||| ||||||||| | |||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 4636514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 18984503 - 18984668
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| |||||||||| |||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  18984503 ctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18984602  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaa 189  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| |||||    
T  18984603 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagccttaa 18984668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 33144078 - 33143925
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgta 177  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 15173478 - 15173636
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| |||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  15173578 aaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 15173636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 9019338 - 9019506
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||| |||||||||||||| |||||||||||||| ||| |  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 9019437  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    || | |||||||| ||||| |||||||| |||||||   ||||||||||||||||||||||||||||||    
T  9019438 ttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaag 9019506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 15646353 - 15646194
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||| |||||  | |||||  | ||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgtttt 15646254  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  15646253 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaag 15646194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 52268430 - 52268285
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||||| | ||||||||||||||||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  145 tgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaat 190  Q
    |||| |  |||||| |||||||||||||||||||||||| ||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagccttaat 52268285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 26859176 - 26859061
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggac 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||  ||||||||| |||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  168 caaaagtgtaattaag 183  Q
    ||||||||||||||||    
T  26859076 caaaagtgtaattaag 26859061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 4636146 - 4636045
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgt 4636047  T
Q  111 tt 112  Q
    ||    
T  4636046 tt 4636045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 5962739 - 5962580
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||| ||||| |||| |||||  | ||||| || ||||| |||||||||||||||||||||||| ||||| |||||||||||| | ||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgtttt 5962640  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| ||||||||||||||| || |||| |||||||||||||||| ||||||||||    
T  5962639 aaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaag 5962580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 52269177 - 52269294
Alignment:
Q  69 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc 168  Q
    |||||||||||| ||||||||||||||||| |||| |||  ||||||| | |||||||||||||| |||  |||| |||||||  |||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  169 aaaagtgtaattaagtct 186  Q
    ||||||||||||||||||    
T  52269277 aaaagtgtaattaagtct 52269294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 17112442 - 17112284
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||| ||||||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||||||||||  |||| || ||||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctatttt 17112343  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||   |||| |||| |||||| | ||||||| ||| ||||||||||||||||||    
T  17112342 aaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaag 17112284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 47827039 - 47826956
Alignment:
Q  110 ttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttt 193  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagtattattttt 47826956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 2733416 - 2733500
Alignment:
Q  99 ttgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||| || ||  ||||||||| |||||||||||| ||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaag 2733500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  85 aacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgta 177  Q
    |||||||||||||||| ||||||  ||||||| | ||||||||||||| ||||| |||||||||||  |||||||| |  || ||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 39485240 - 39485068
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||||||||| |||||| |||| || ||   ||||| || | |||||| |||| ||||| ||| || ||| || | ||||     
T  39485240 agcatatggggtaggtctaaaactgtcatctctctgtgtttctgaagttgaaaataggagataggactaaaactgcaaaaaacat-atagtttagggacg 39485142  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
     |||||||  |||| |||  || ||||||| |||||||||  |  |||||  ||||||||||||||||||||||    
T  39485141 attttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaa 39485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 17088326 - 17088243
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 92  Q
    |||||||| |||||||||||||||| ||||||||||| ||| || ||   ||||| || |||||||| |||| ||||| |||||    
T  17088326 agcataggaggtaggtctaaaactgccatttctctgcatttctgaagttgaaaataggaggtaggactaaaattgcaaaaaaaa 17088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 39843280 - 39843193
Alignment:
Q  58 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    |||||||||||  ||||| |||| ||||| ||| |||||| |  | |||||||||||||  |||| |||| |||||||||||||||||    
T  39843280 taaaatgggggtaaggaccaaaagtgcaaaaaacatgatagtatagggaccgttttgttcgatttgaaaaaggcaggaccagtttcgt 39843193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 9833522 - 9833599
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaa 86  Q
    |||||||| |||||| |||||| ||| |||||| ||||||| |||||   ||||| ||||||||||| |||| |||||    
T  9833522 agcataggtggtaggactaaaaatgttatttctgtgcgtttctggagttgaaaatagggggtaggactaaaactgcaa 9833599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 29021056 - 29020959
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagga 106  Q
    ||||||| ||||||| ||||||||| ||||| | |||||||||||||   ||||| ||| |||  || |||| ||||| ||| ||||||||| |||||    
T  29021056 agcatagcgggtaggactaaaactgacatttatgtgcgtttttggaggtgaaaatagggagtaacactaaaattgcaaaaaacatgataatttaagga 29020959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 50419725 - 50419770
Alignment:
Q  104 ggaccgttttgttatattttaaaagggcaggaccagtttcgtgagt 149  Q
    |||||||||||||  ||||||||| |||||||||| ||||||||||    
T  50419725 ggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagt 50419770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 52235074 - 52235178
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    |||||||||||  ||||||| ||| |||||| |||| ||||| ||| |||||| |  | |||| | || |||  |||| |||||||||||| ||||||||    
T  52235074 cgtttttggagggtaaaatgagggttaggaccaaaattgcaagaaacatgatagtatagggactgcttcgttcgatttgaaaagggcaggatcagtttcg 52235173  T
Q  145 tgagt 149  Q
    |||||    
T  52235174 tgagt 52235178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 4e-81; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 33109860 - 33109680
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaa 189  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaagtcttaa 33109680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 46193774 - 46193952
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtctt 187  Q
    |||||||| | ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagtctt 46193952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 4219733 - 4219548
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
    |||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||| | ||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagtcatcatttta 4219548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 15523603 - 15523782
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtctta 188  Q
     ||||||| | |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| ||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcctta 15523782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 12234505 - 12234331
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaag 12234331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 38962195 - 38962365
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 38962294  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
    | | |||||||||||| ||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  38962295 tctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaagtct 38962365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 11153516 - 11153690
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 11153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 25447611 - 25447779
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    || | |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 25447779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 23494619 - 23494441
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtctt 187  Q
    | |||||| | ||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagtctt 23494441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 25937846 - 25937672
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaag 25937672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 51020973 - 51020799
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||||||||||||| |||| | | |||||||| ||||| ||||||||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaag 51020799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 22434547 - 22434718
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| |  ||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  22434646 gttttgttct-gtttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 22434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 22170306 - 22170479
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||| ||||||| || |||||| ||||   ||||||||||||||||||||||||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaag 22170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 45082606 - 45082435
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| |||||||||||||||  ||||| |||||||||| |||||||||||| ||||||||| ||||||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaa 45082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 48526371 - 48526198
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||||  |||||||| ||||||   ||||||||||| ||||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaag 48526198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2118665 - 2118837
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||||| ||||||||||  |||||||||||| |||| |  ||||||||||| ||||||||||||||||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 54995437 - 54995609
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| ||||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 54995609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 22434340 - 22434181
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaag 22434181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 45082808 - 45082967
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 45082967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 46193568 - 46193407
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 25447408 - 25447249
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaag 25447249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 15523395 - 15523237
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||||||||||||||||||| | |||  | ||||| || ||||||||||||||||||| |||||| |||||||||||||||||||||| | |||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 15523237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 48526565 - 48526723
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 12503805 - 12503912
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  109 gttttgtt 116  Q
    ||||||||    
T  12503905 gttttgtt 12503912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 23494872 - 23494986
Alignment:
Q  69 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  169 aaaagtgtaattaag 183  Q
    |||||||||||||||    
T  23494972 aaaagtgtaattaag 23494986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 2118454 - 2118291
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  2118454 ctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgtttt 2118355  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtctt 187  Q
    ||||||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||    
T  2118354 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagtctt 2118291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 11153307 - 11153148
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| |  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| ||||| ||| |||||||  |||||||||||||||||||||| ||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaag 11153148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 12234713 - 12234872
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||| ||| |  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12234812  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| || ||||||||||||||  |||||||||||||||||||||| ||||||||    
T  12234813 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaag 12234872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 20470895 - 20471054
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| | |||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaag 20471054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4219943 - 4220101
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||| ||||||||||||||||| ||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 54995230 - 54995072
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 54995131  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||||||||||||||||    
T  54995130 aaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaa 54995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 33109883 - 33110007
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |  ||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  159 cacgaggaccaaaagtgtaattaag 183  Q
    || ||||||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaag 33110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 25938056 - 25938225
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||| ||||||| || |||| |||||  | ||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||    
T  25938056 taaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtttta 25938155  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
    |||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| ||| ||||||    
T  25938156 aaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcctttatttta 25938225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 51021180 - 51021338
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| || ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||| | ||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgtttt 51021278  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||    
T  51021279 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaag 51021338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18751760 - 18751602
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||| ||||||||| |||||  | ||||| || ||| |||||||||||||||||||||||||| |||||||||||||||||| | ||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgtttt 18751661  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||| |||||||||  ||||||  ||||||||||||||||||||||||||||||    
T  18751660 aaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 48293735 - 48293596
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||  ||||||| | |||||||  | ||||| || ||||    
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaag 48293596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 20958264 - 20958402
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||   |||||| | ||||||||||||||||||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  |||||| |||||||| |||||||||||||||    
T  20958362 cgtgagtaggccaaaatacgaggactaaaagtgtaattaag 20958402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 18763951 - 18764066
Alignment:
Q  71 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaa 170  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||| | |||||||||| || |||||||||||||||||  ||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  171 aagtgtaattaagtct 186  Q
    ||||||||||||||||    
T  18764051 aagtgtaattaagtct 18764066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 16691072 - 16690939
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||| | |||||||  |||||||||| |||||||||    
T  16691072 tttggaggataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgag 16690973  T
Q  149 taaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    || | |||||||| |||||||||| |||||||||    
T  16690972 tagatcaaaacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 25 - 168
Target Start/End: Complemental strand, 12503597 - 12503453
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc 168  Q
    |||| ||| ||| |||||||||||||||  |||||||||||||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 44892552 - 44892691
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||| ||| |||||||| | |||||||| ||||| |||| ||||    
T  44892552 gcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||   ||||||||||||||||||| | ||||||||    
T  44892652 gtgagtaggtcaaaacacgaggaccaaaaatataattaag 44892691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 35363028 - 35363144
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt-aaaagggcaggaccagtttcgtgagtaaaccaaaacacgagga 166  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| | |||| ||||| |||| ||||||||||||||||  ||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  167 ccaaaagtgtaattaag 183  Q
     ||||||||||||||||    
T  35363128 tcaaaagtgtaattaag 35363144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 48294946 - 48295086
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacg-aaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||| | |||||||  |||| ||||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||| |||||||| ||||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaag 48295086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||  ||||||| | ||||||||| | | ||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaa 178  Q
    ||||| ||||||| |||||||||||| |||||    
T  20957227 agtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 43243685 - 43243807
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||  ||||||| | ||||||||||||| ||||| ||||    
T  43243685 gcgtttttggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  144 gtgagtaaaccaaaacacgaggac 167  Q
    |||||||  |||||||||||||||    
T  43243784 gtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 48713749 - 48713888
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||| ||| ||||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    | ||||||  | |||||||||| |  ||||||||||||||    
T  48713849 catgagtaggctaaaacacgagaattaaaagtgtaattaa 48713888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 48708431 - 48708297
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||| | |||||||  | ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| || |||||||      
T  48708431 tttggaggataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggt 48708332  T
Q  149 taaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||  |||||||||  ||||||||||||||||||||    
T  48708331 taggccaaaacacatggaccaaaagtgtaattaag 48708297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 43281198 - 43281317
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||| | |||||||| |||| ||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  147 agtaaaccaaaacacgaggac 167  Q
    ||||  |||||||||||||||    
T  43281297 agtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 44890658 - 44890519
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||| ||| ||||||||||||||| || |||||||||||||||||  |||||| |||||   ||||||| | ||||||||||||| ||||| ||||    
T  44890658 gcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| ||   |||||||| |||||||||| ||||||||||    
T  44890558 gtgaataggtcaaaacacaaggaccaaaattgtaattaag 44890519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 183
Target Start/End: Original strand, 16691481 - 16691614
Alignment:
Q  49 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||| |||||| ||||||  |||||||||  ||||||  |||||||||| |||||||||    
T  16691481 tttggaggataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttat-gtttaaagaggcaggaccattttcgtgag 16691579  T
Q  149 taaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||   ||||||||  ||| ||||||||||||||||    
T  16691580 taggtcaaaacacagggatcaaaagtgtaattaag 16691614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 10258306 - 10258435
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||  ||  ||||  | | ||||||||||||||||||| |||| ||||||  ||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  159 cacgaggaccaaaagtgtaattaagtctta 188  Q
    ||||||||||||||||||||||||| ||||    
T  10258406 cacgaggaccaaaagtgtaattaagcctta 10258435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18751971 - 18752038
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacg 76  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggacg 18752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 17504149 - 17503967
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||   ||||| || |||||||| |||| ||||| ||| |||||| ||  |||||     
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacg 17504051  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaattt 192  Q
    ||| ||||  |||| |||  |||||||||| |||||||||     |||||  |||||||||| ||| |||||||| ||||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagccttaattt 17503967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 43242411 - 43242328
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaa 127  Q
    |||||||||||  ||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||||    
T  43242411 gcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 16318256 - 16318319
Alignment:
Q  120 ttttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||    
T  16318256 ttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 16318319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 44220781 - 44220853
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt 116  Q
    |||||||||||| |||||||  ||||||| |||||||||| |||||||||||||| ||||||||  |||||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgtt 44220853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 55189636 - 55189530
Alignment:
Q  77 aaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgt 176  Q
    ||||||| | ||||||||||||||||| |||  ||||||| |||||||||||||||  |||| |||  ||| ||   ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  177 aattaag 183  Q
    |||||||    
T  55189536 aattaag 55189530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctc 42  Q
    ||||||||||||||||||||||||||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 183
Target Start/End: Original strand, 35193766 - 35193846
Alignment:
Q  103 aggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| ||||||||| |||| |||  |||||||||| |||||||||   | |||||  | |||||||||||||||||||||    
T  35193766 aggacggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaag 35193846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 11090695 - 11090524
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| | ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 11090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 26538273 - 26538085
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaattttacaa 197  Q
    | |||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagccttaattttacaa 26538085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  112 ttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 40027316 - 40027136
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaa 189  Q
    |||||||| | ||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||| |||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagccttaa 40027136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 239528 - 239355
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  239428 gttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaag 239355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 40815714 - 40815887
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40815887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 18451200 - 18451374
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaag 18451374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 22374496 - 22374322
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 22374322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 1978284 - 1978110
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaag 1978110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgt 8425835  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    | ||||||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||||||    
T  8425836 tctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 43058509 - 43058335
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||| |||||||||||||| ||||||   |||||||||||||| ||||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaag 43058335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 28616788 - 28616615
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    |||||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  110 ttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| | ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 28616615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 3025641 - 3025472
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 26538454 - 26538622
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| ||| |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26538553  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    || | |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  26538554 ttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 26538622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 7446519 - 7446344
Alignment:
Q  11 catagggggtaggtctaaaa----ctgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagga 106  Q
    ||||||||||| ||||||||    |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatga 7446421  T
Q  107 ccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||| | ||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||||||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaag 7446344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 7446730 - 7446889
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||||||||||||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaag 7446889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 40815506 - 40815347
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  ||||| | || ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 20444890 - 20444751
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||   |||||||||||||||||||||||||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaag 20444751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 18450991 - 18450832
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 18450832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 15551641 - 15551498
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||  ||||||| | |||||||| |||| ||||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15551541 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 15551498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 22374709 - 22374868
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 22374868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 40027524 - 40027682
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| |||||| |||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 40027623  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  40027624 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 28847123 - 28847238
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggac 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  168 caaaagtgtaattaag 183  Q
    ||||| ||||||||||    
T  28847223 caaaaatgtaattaag 28847238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 35779849 - 35779710
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| | |||||||| |||||||||| ||||    
T  35779849 gcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||   ||||||||||||||||||||||||||||||    
T  35779749 gtgagtatgtcaaaacacgaggaccaaaagtgtaattaag 35779710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 35781067 - 35781206
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||| ||||| ||||    
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||  |||||||||||||| ||||||||||||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaag 35781206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 193
Target Start/End: Original strand, 28616998 - 28617167
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 28617097  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttt 193  Q
    |||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||| ||| |||||    
T  28617098 aaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttcatttt 28617167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 239736 - 239895
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||| ||||||||| |||||||||||||||||||||||||| ||||||| | ||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaag 239895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 11090904 - 11091063
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||| ||||||||| |||||  | ||||| || | ||||||||||||| |||||| |||||||||||||||||||||||||| | ||||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgtttt 11091003  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  11091004 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 11091063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 20440436 - 20440574
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||| |||||| ||||||||||| ||||||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||||    
T  20440436 gcgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 20440534  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||   |||||||||||||||||||||||||||||||    
T  20440535 gtgagttggccaaaacacgaggaccaaaagtgtaattaag 20440574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 43058717 - 43058875
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||||||| ||||||| | ||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaag 43058875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 3025848 - 3026004
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||||||||||||||| ||| |||||  | ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| | |||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaag 3026004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 8972378 - 8972237
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||| |||  ||||||| | |||| |||||||| ||||| ||||    
T  8972378 gcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtc 185  Q
    ||||| |  |||||||||||||||||||||||||||||||||    
T  8972278 gtgagcatgccaaaacacgaggaccaaaagtgtaattaagtc 8972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 1978528 - 1978652
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||  ||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  159 cacgaggaccaaaagtgtaattaag 183  Q
    ||| |||||||||||||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaag 1978652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaag-accgttttgttctgtttta 8425416  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||| || | ||||| |||||||||||  ||||||||| ||||||||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 14432525 - 14432684
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| |||||||||||||||||| |||||||||| ||| |||| || | ||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| |||| |||||||||| ||||||  |||||||||||||||||||| ||||||||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 185
Target Start/End: Original strand, 15552459 - 15552598
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    |||||||||||   ||||||| |||||||||||||||| |||||||||||||||||||| |||  ||||||| | |||||||||||| ||| || |||||    
T  15552459 cgtttttggagggcaaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcg 15552557  T
Q  145 tgagtaaaccaaaacacgaggaccaaaagtgtaattaagtc 185  Q
    ||||||  ||||||||  | |||||||||||||||||||||    
T  15552558 tgagtaggccaaaacattatgaccaaaagtgtaattaagtc 15552598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 28143400 - 28143573
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| ||  ||||||| |||| ||||| ||| |||||| || | ||||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     |||||||  |||| |||  |||||||||| |||||||||     |||||  ||||||||||||||| |||||||    
T  28143499 attttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaag 28143573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 151; Significance: 6e-80; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 4969 - 4795
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 4795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 5179 - 5336
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||| ||||||||| |||||  | ||||| ||    |||||||||||||||||||||||||||||||||  |||||||| || | ||||    
T  5179 ctaaaactgtcatttttctgcgtttctggagtttgaaaatagg----aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgtttt 5274  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtc 185  Q
    |||||| || |||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  5275 aaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaagtc 5336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 4576 - 4750
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaag 4750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||||| |||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  124 aaaagggcaggaccagtttcgtg 146  Q
    |||||||||||||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 147; Significance: 2e-77; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 64478 - 64296
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatt 191  Q
    |||||||| | |||||||||| ||||| ||||||||||||||   |||||||||||||||||||||||||||||| |||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagccttaatt 64296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  70 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacca 169  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  170 aaagtgtaattaa 182  Q
    |||||||||||||    
T  64835 aaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 205738 - 205918
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||  ||||||| |||| ||||| ||| |||||| || | ||||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaat 190  Q
    ||||||||  |||| |||  |||||||||| ||||||||||    |||||   |||||| ||||||||||||||| ||||||    
T  205837 gttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaagacttaat 205918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 19176659 - 19176833
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 19176833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 9930026 - 9930211
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
     ||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| ||| ||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctttatttta 9930211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 12572040 - 12571856
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggt-aggacgaaaaatgcaacaaaaatgataattgaaggac 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  108 cgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaattt 192  Q
    ||||||||| | ||||||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||| || |||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaattt 12571856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 41681306 - 41681136
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 111  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  112 ttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 41681136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 44831614 - 44831788
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 44831788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 33328334 - 33328161
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | ||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaatta 181  Q
    |||||||| | ||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 31133396 - 31133222
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaag 31133222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 11656630 - 11656457
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  110 ttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||   ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 11656457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 9178005 - 9178178
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| || || |||||||||||||||||||||| ||||||||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||| |||||| || ||||||||||||||  |||||||||||||||||||||||||||||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 9178178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 13225023 - 13225182
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 13225182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 9929070 - 9928912
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 9928971  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  9928970 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 19176451 - 19176292
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176352  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  19176351 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 19176292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 44831408 - 44831243
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaa 189  Q
    ||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||||| |||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagccttaa 44831243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||      ||||||||||||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||| | || | ||||||||  ||||||||| |||||||||||  ||||||||||| || |||||||||||||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 11656841 - 11657011
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| ||||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctttatttta 11657011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 12572235 - 12572393
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12572334  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  12572335 aaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 34540934 - 34541091
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaa 125  Q
    |||||| |||||||||||||||| |  ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  126 aagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 34541091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| ||| ||| |||||||||||||  | |||||||||||||||||||| ||||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 33743290 - 33743417
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  111 tttgttatattttaaaagggcaggacca 138  Q
    |||||| | |||||||| ||||| ||||    
T  33743390 tttgttctgttttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 41681518 - 41681677
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||  ||||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  41681518 ctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 41681617  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| |||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  41681618 aaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaag 41681677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 31133605 - 31133763
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||| ||||||||||||| ||| |||||  | ||||| || |||| ||||||||||||||||||||| |||||||||||||||||||||| | |||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 31133763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 33743082 - 33742924
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| | || ||||| || |||||||||||||||||| ||||||||||||||||| |||||||| ||| | ||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaag 33742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 183
Target Start/End: Complemental strand, 4629952 - 4629799
Alignment:
Q  31 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagg 129  Q
    ||||||||||| ||||||| |||||  | ||||| || |||| |||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  130 gcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||| ||  |||||||||||| |  ||||||| |||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaag 4629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 11336959 - 11337065
Alignment:
Q  77 aaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgt 176  Q
    ||||||||||||||||||||||||||| ||||||||| || | |||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  177 aattaag 183  Q
    |||||||    
T  11337059 aattaag 11337065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 10918264 - 10918129
Alignment:
Q  47 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||  ||||| | | ||||||   |||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||| | |||||||||||||| |||| |||||||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaa 10918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 43958326 - 43958264
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagga 106  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 8073956 - 8074094
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    ||||||||||||  ||||||||||| |  |||| |||||||||||||| ||||||||||||||   ||||||| | |||||||||| || || || ||||    
T  8073956 gcgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| ||  |||||||||||||||||||||| ||| ||||    
T  8074055 gtgaataggccaaaacacgaggaccaaaagtataactaag 8074094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 9177793 - 9177724
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaat 93  Q
    ||||||||||||||||||| ||||| |||||  | |||||||| ||| ||| ||||||||||||||||||    
T  9177793 ctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 18805337 - 18805292
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctctgtgtttctggag 18805292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 10919700 - 10919740
Alignment:
Q  154 caaaacacgaggaccaaaagtgtaattaagtcttaatttta 194  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  10919700 caaaacacgaggaccaaaagtataattaagccttaatttta 10919740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 183
Target Start/End: Complemental strand, 9177699 - 9177669
Alignment:
Q  153 ccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||||||    
T  9177699 ccaaaacacgaggaccaaaagtgtaattaag 9177669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 43958254 - 43958208
Alignment:
Q  140 tttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
    ||||||||||| | |||||||||| |||||||||| |||||||||||    
T  43958254 tttcgtgagtagatcaaaacacgaagaccaaaagtataattaagtct 43958208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 1841 - 1669
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| | |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaag 1669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 2051 - 2210
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaag 2210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 134042 - 134216
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | | ||||||||||| ||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 134216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 134; Significance: 9e-70; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 928 - 752
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtct 186  Q
    |||||||| | ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagtct 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 1116 - 1284
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    ||||| |||||||||||| ||||| ||||||||| ||| |  | ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttg 1215  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    || | |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  1216 ttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaag 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | ||||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 10039 - 9930
Alignment:
Q  78 aaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgta 177  Q
    |||||| ||||||| |||||||||||||||| ||||||| ||| ||||||||||| || ||||||||||| ||  | |||||||||||||||||| ||||    
T  10039 aaaatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgta 9940  T
Q  178 attaagtctt 187  Q
    ||||| ||||    
T  9939 attaaatctt 9930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 42528 - 42701
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | |||||||||||||| | ||||||| |||||| |||||||||||||| |||||||| ||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaag 42701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 42339 - 42172
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| || ||  | ||||| || |||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttg 42240  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    || | |||||||| ||||||| ||||||||||| || ||||||||||||| || ||||||||||||||    
T  42239 ttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 10797 - 10640
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgagga 166  Q
    |||||||| | |||||||||||||||||||||||| ||||||  ||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 11007 - 11166
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11007 ctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 11106  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  11107 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaag 11166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 19001 - 18827
Alignment:
Q  18 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtta 117  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgtta 18903  T
Q  118 tattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagtcttaatttt 193  Q
    | ||||||||||||| |||||||||||||||||  ||||||||  ||||||||||||||||| ||| ||| |||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcctttatttt 18827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 88 - 183
Target Start/End: Original strand, 19069 - 19164
Alignment:
Q  88 aaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 19164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 16672 - 16565
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  109 gttttgtt 116  Q
    ||||||||    
T  16572 gttttgtt 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 16880 - 17024
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc 168  Q
    |||| ||| ||| |||||||||||||||  |||||||||||||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 28662 - 28784
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||| |||||||||||| ||||  ||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  159 cacgaggaccaaaagtgtaatta 181  Q
    ||||| |||||||||||||||||    
T  28762 cacgatgaccaaaagtgtaatta 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 61862 - 62000
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| | ||||||||||||||||||||||||  ||||||||||||| ||||| ||   ||||||| ||||||||||||| ||||||| ||||    
T  61862 gcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  61962 gtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 61102 - 61030
Alignment:
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| |||||||||| ||||||| || |||||||||||  |||||||||||||| |||||||||| |||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaag 61030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 709 - 569
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| || ||||||| |||  |||||||||| |||||||||||||||||||||||| |||||||| | ||||||||||||| || || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  |||||||||||||| ||||||||||||||||    
T  609 cgtgagtaggccaaaacacgaggatcaaaagtgtaattaag 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  82 tgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaatta 181  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||| |||| ||||||||| || |||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  182 a 182  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 589 - 454
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||  || |||| | |||||||||  || ||||| ||||    
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaatta 181  Q
    |||||||  ||||||||||| |||||||| ||||||||    
T  490 gtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 7691 - 7784
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggac 136  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||| | ||||||||||| |||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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