View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13697_low_5 (Length: 462)

Name: NF13697_low_5
Description: NF13697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13697_low_5
NF13697_low_5
[»] chr1 (37 HSPs)
chr1 (118-414)||(29462639-29462937)
chr1 (1-120)||(50970707-50970826)
chr1 (1-114)||(21856472-21856585)
chr1 (1-119)||(5963007-5963125)
chr1 (1-119)||(15646624-15646742)
chr1 (1-114)||(8678544-8678657)
chr1 (1-114)||(17433644-17433757)
chr1 (4-114)||(4636403-4636513)
chr1 (1-119)||(39154449-39154567)
chr1 (1-114)||(17433219-17433332)
chr1 (1-114)||(18984122-18984235)
chr1 (1-114)||(26859062-26859175)
chr1 (1-114)||(29306956-29307069)
chr1 (1-114)||(29307371-29307484)
chr1 (1-114)||(29870048-29870161)
chr1 (1-121)||(5540247-5540367)
chr1 (1-119)||(18984548-18984666)
chr1 (1-119)||(29869618-29869736)
chr1 (1-114)||(5539819-5539932)
chr1 (1-114)||(9018976-9019089)
chr1 (1-114)||(15646195-15646308)
chr1 (1-114)||(33144348-33144461)
chr1 (1-114)||(39154022-39154135)
chr1 (1-114)||(50970281-50970394)
chr1 (2-114)||(21856045-21856157)
chr1 (1-114)||(8678970-8679083)
chr1 (1-114)||(9019392-9019505)
chr1 (1-118)||(15173095-15173212)
chr1 (1-114)||(15173523-15173635)
chr1 (1-114)||(26859488-26859601)
chr1 (1-109)||(33143925-33144033)
chr1 (1-114)||(5962581-5962694)
chr1 (1-119)||(52268288-52268406)
chr1 (31-114)||(2733416-2733499)
chr1 (42-114)||(47826967-47827039)
chr1 (9-57)||(4636033-4636080)
chr1 (119-275)||(5877788-5877943)
[»] chr8 (29 HSPs)
chr8 (1-119)||(33328156-33328274)
chr8 (1-120)||(13225068-13225187)
chr8 (8-114)||(9178071-9178177)
chr8 (1-114)||(31133223-31133336)
chr8 (1-114)||(41681137-41681250)
chr8 (1-114)||(9928912-9929025)
chr8 (1-114)||(11656458-11656571)
chr8 (1-114)||(19176719-19176832)
chr8 (5-114)||(31133653-31133762)
chr8 (1-114)||(34540977-34541090)
chr8 (1-114)||(41681563-41681676)
chr8 (1-117)||(12572280-12572396)
chr8 (4-114)||(19176293-19176403)
chr8 (1-120)||(9930086-9930205)
chr8 (1-120)||(11656886-11657005)
chr8 (4-114)||(33328572-33328682)
chr8 (1-119)||(44831245-44831363)
chr8 (2-114)||(12571866-12571978)
chr8 (1-114)||(33742925-33743037)
chr8 (1-113)||(13224645-13224756)
chr8 (5-114)||(4629800-4629909)
chr8 (1-114)||(44831674-44831787)
chr8 (1-64)||(33743348-33743411)
chr8 (5-119)||(8073985-8074098)
chr8 (9-114)||(11336959-11337064)
chr8 (130-248)||(26159175-26159294)
chr8 (8-118)||(10918125-10918235)
chr8 (31-116)||(4630245-4630330)
chr8 (1-38)||(43958264-43958301)
[»] chr3 (50 HSPs)
chr3 (1-117)||(41046700-41046816)
chr3 (1-121)||(20840990-20841110)
chr3 (1-114)||(17464494-17464607)
chr3 (1-121)||(32534955-32535075)
chr3 (1-123)||(5136974-5137096)
chr3 (1-114)||(20840563-20840676)
chr3 (1-114)||(43973444-43973557)
chr3 (1-121)||(37726925-37727045)
chr3 (1-119)||(27393659-27393777)
chr3 (4-114)||(31779084-31779194)
chr3 (1-114)||(4275793-4275906)
chr3 (1-114)||(24300985-24301098)
chr3 (1-120)||(39555575-39555694)
chr3 (1-119)||(30098192-30098310)
chr3 (1-111)||(48452995-48453105)
chr3 (1-114)||(22424817-22424930)
chr3 (1-114)||(25853237-25853350)
chr3 (1-114)||(37727359-37727472)
chr3 (1-114)||(39556006-39556119)
chr3 (1-114)||(43973869-43973982)
chr3 (1-121)||(23644458-23644578)
chr3 (1-114)||(25853656-25853769)
chr3 (5-114)||(29801359-29801468)
chr3 (1-114)||(30104485-30104598)
chr3 (1-113)||(22425242-22425354)
chr3 (1-120)||(31778650-31778769)
chr3 (1-119)||(27394006-27394124)
chr3 (4-114)||(29801848-29801958)
chr3 (1-114)||(32535387-32535505)
chr3 (5-122)||(26274562-26274679)
chr3 (1-118)||(26837359-26837476)
chr3 (1-114)||(26837785-26837897)
chr3 (1-114)||(51474763-51474876)
chr3 (1-117)||(25612406-25612522)
chr3 (1-114)||(23228437-23228549)
chr3 (1-114)||(23644894-23645007)
chr3 (4-121)||(24300553-24300669)
chr3 (2-114)||(5137411-5137523)
chr3 (1-114)||(50116838-50116951)
chr3 (3-114)||(51473431-51473542)
chr3 (9-119)||(17464929-17465039)
chr3 (1-118)||(26274996-26275112)
chr3 (1-114)||(32697129-32697242)
chr3 (6-114)||(45965941-45966049)
chr3 (31-114)||(37222030-37222113)
chr3 (1-120)||(41047128-41047245)
chr3 (5-114)||(25420574-25420683)
chr3 (3-116)||(32695704-32695817)
chr3 (1-114)||(37220560-37220673)
chr3 (3-59)||(18010176-18010232)
[»] chr7 (26 HSPs)
chr7 (1-120)||(37786764-37786883)
chr7 (1-118)||(19830419-19830536)
chr7 (1-114)||(19590954-19591067)
chr7 (1-114)||(34534220-34534333)
chr7 (1-114)||(19590528-19590641)
chr7 (1-104)||(29099863-29099966)
chr7 (1-119)||(4641438-4641556)
chr7 (1-114)||(23952733-23952847)
chr7 (1-114)||(32004617-32004730)
chr7 (1-114)||(38859070-38859183)
chr7 (1-114)||(32005043-32005156)
chr7 (1-114)||(35288906-35289019)
chr7 (5-114)||(35289334-35289443)
chr7 (1-121)||(29100280-29100400)
chr7 (9-120)||(19830856-19830967)
chr7 (5-114)||(2658842-2658951)
chr7 (1-114)||(2659269-2659382)
chr7 (1-114)||(34533794-34533907)
chr7 (1-114)||(37787196-37787309)
chr7 (1-120)||(38858640-38858759)
chr7 (1-114)||(38160954-38161067)
chr7 (1-114)||(4641873-4641983)
chr7 (5-111)||(23953162-23953268)
chr7 (5-118)||(4478133-4478246)
chr7 (1-114)||(28583442-28583555)
chr7 (5-114)||(28584355-28584464)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-114)||(11052-11165)
scaffold0417 (1-96)||(10642-10737)
[»] chr4 (52 HSPs)
chr4 (1-123)||(12234758-12234880)
chr4 (2-118)||(54995498-54995613)
chr4 (1-114)||(20470940-20471053)
chr4 (1-114)||(23494872-23494985)
chr4 (1-114)||(45082853-45082966)
chr4 (4-119)||(18751597-18751712)
chr4 (1-118)||(4219988-4220105)
chr4 (1-114)||(11153576-11153689)
chr4 (1-114)||(25447250-25447363)
chr4 (1-121)||(22170366-22170485)
chr4 (3-114)||(18763951-18764062)
chr4 (1-120)||(48526610-48526729)
chr4 (1-119)||(15523663-15523781)
chr4 (1-114)||(12234332-12234445)
chr4 (1-114)||(15523238-15523351)
chr4 (1-114)||(22434182-22434295)
chr4 (1-114)||(25447665-25447778)
chr4 (1-114)||(33109893-33110006)
chr4 (1-114)||(38962248-38962361)
chr4 (1-114)||(46193408-46193521)
chr4 (1-114)||(46193834-46193947)
chr4 (1-114)||(48526199-48526312)
chr4 (1-118)||(54995068-54995185)
chr4 (1-114)||(2118296-2118409)
chr4 (1-114)||(4219560-4219673)
chr4 (1-118)||(22434606-22434722)
chr4 (1-114)||(33109687-33109800)
chr4 (1-121)||(11153142-11153262)
chr4 (1-120)||(2118724-2118843)
chr4 (3-114)||(25937673-25937784)
chr4 (1-120)||(25938100-25938219)
chr4 (1-114)||(23494446-23494559)
chr4 (1-114)||(51020800-51020913)
chr4 (1-114)||(51021225-51021337)
chr4 (1-120)||(16690933-16691052)
chr4 (3-118)||(48713777-48713892)
chr4 (1-114)||(44892577-44892690)
chr4 (1-118)||(45082431-45082547)
chr4 (1-96)||(12503457-12503552)
chr4 (8-123)||(44890511-44890626)
chr4 (3-114)||(48293597-48293708)
chr4 (11-114)||(48708298-48708401)
chr4 (1-114)||(35363029-35363143)
chr4 (1-96)||(43243709-43243804)
chr4 (9-114)||(20958296-20958401)
chr4 (1-62)||(43242325-43242386)
chr4 (5-48)||(12503869-12503912)
chr4 (1-96)||(43281220-43281314)
chr4 (8-114)||(48294979-48295085)
chr4 (50-119)||(16318254-16318323)
chr4 (5-114)||(16691505-16691613)
chr4 (5-110)||(20957196-20957301)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-114)||(4796-4909)
scaffold0295 (3-114)||(5222-5333)
[»] chr6 (33 HSPs)
chr6 (1-114)||(11445416-11445529)
chr6 (1-119)||(15828070-15828188)
chr6 (1-114)||(2319675-2319788)
chr6 (1-114)||(10900359-10900472)
chr6 (1-114)||(12935160-12935273)
chr6 (1-114)||(23075557-23075670)
chr6 (1-116)||(18504920-18505035)
chr6 (1-115)||(10899941-10900055)
chr6 (1-114)||(18505348-18505461)
chr6 (1-114)||(20741103-20741216)
chr6 (1-114)||(22219782-22219895)
chr6 (1-116)||(2322647-2322762)
chr6 (1-114)||(11277011-11277124)
chr6 (1-114)||(12935586-12935699)
chr6 (5-114)||(18257140-18257249)
chr6 (1-120)||(20741530-20741652)
chr6 (8-114)||(4811692-4811798)
chr6 (1-114)||(1149861-1149974)
chr6 (1-114)||(18257566-18257679)
chr6 (1-114)||(31470745-31470858)
chr6 (1-119)||(31470313-31470431)
chr6 (1-114)||(11444990-11445103)
chr6 (1-114)||(28472640-28472753)
chr6 (1-114)||(29859829-29859942)
chr6 (1-114)||(15827641-15827756)
chr6 (20-119)||(23073997-23074096)
chr6 (1-119)||(3835155-3835273)
chr6 (5-114)||(4811375-4811484)
chr6 (1-122)||(11276585-11276706)
chr6 (31-114)||(1149468-1149551)
chr6 (4-114)||(29035069-29035179)
chr6 (1-114)||(18296148-18296261)
chr6 (1-114)||(29033437-29033550)
[»] chr5 (41 HSPs)
chr5 (1-114)||(2864757-2864870)
chr5 (1-118)||(18182969-18183086)
chr5 (5-129)||(5818917-5819041)
chr5 (5-114)||(8647871-8647980)
chr5 (5-114)||(14215676-14215785)
chr5 (9-118)||(15372310-15372419)
chr5 (1-114)||(18183398-18183511)
chr5 (1-114)||(2865184-2865297)
chr5 (1-114)||(5819358-5819471)
chr5 (1-114)||(8647441-8647554)
chr5 (1-114)||(19359565-19359678)
chr5 (1-114)||(24362265-24362378)
chr5 (1-114)||(15708974-15709087)
chr5 (1-114)||(19359139-19359252)
chr5 (5-119)||(8461364-8461478)
chr5 (1-111)||(24361843-24361953)
chr5 (1-119)||(29455171-29455289)
chr5 (1-120)||(16018586-16018704)
chr5 (2-114)||(24331562-24331676)
chr5 (1-111)||(24325218-24325328)
chr5 (1-114)||(164194-164306)
chr5 (1-114)||(14215244-14215357)
chr5 (1-119)||(29454738-29454856)
chr5 (1-114)||(4219666-4219779)
chr5 (5-114)||(8460933-8461042)
chr5 (1-114)||(14463949-14464062)
chr5 (4-121)||(25000521-25000638)
chr5 (1-74)||(164620-164693)
chr5 (1-114)||(4222151-4222264)
chr5 (4-114)||(15371874-15371983)
chr5 (1-114)||(4623151-4623264)
chr5 (1-114)||(6018317-6018429)
chr5 (1-114)||(7349446-7349559)
chr5 (1-114)||(15709398-15709510)
chr5 (1-118)||(16019016-16019133)
chr5 (1-114)||(24331989-24332106)
chr5 (1-96)||(4624654-4624749)
chr5 (226-275)||(37511204-37511253)
chr5 (1-77)||(6019199-6019276)
chr5 (1-114)||(7348562-7348675)
chr5 (117-155)||(15079021-15079059)
[»] chr2 (38 HSPs)
chr2 (1-114)||(22374323-22374436)
chr2 (1-125)||(11090513-11090637)
chr2 (1-114)||(40815348-40815461)
chr2 (1-118)||(40815774-40815891)
chr2 (1-120)||(40027569-40027688)
chr2 (1-119)||(40027138-40027256)
chr2 (1-118)||(3025465-3025582)
chr2 (1-114)||(22374754-22374867)
chr2 (1-114)||(26538508-26538621)
chr2 (1-114)||(28616616-28616729)
chr2 (2-114)||(11090950-11091062)
chr2 (1-117)||(14432142-14432258)
chr2 (1-114)||(239356-239468)
chr2 (1-114)||(7446775-7446888)
chr2 (1-114)||(18451260-18451373)
chr2 (1-120)||(20444746-20444865)
chr2 (1-119)||(18450828-18450946)
chr2 (1-119)||(26538095-26538213)
chr2 (1-114)||(28847124-28847237)
chr2 (1-114)||(43058336-43058449)
chr2 (2-114)||(35781093-35781205)
chr2 (3-114)||(1978111-1978222)
chr2 (5-119)||(28617047-28617161)
chr2 (1-114)||(1978538-1978651)
chr2 (2-114)||(20440461-20440573)
chr2 (1-115)||(8425357-8425470)
chr2 (5-115)||(8425793-8425903)
chr2 (4-114)||(15551502-15551612)
chr2 (5-110)||(239785-239890)
chr2 (1-114)||(35779711-35779824)
chr2 (1-114)||(43058762-43058874)
chr2 (1-114)||(14432570-14432683)
chr2 (307-393)||(9363209-9363293)
chr2 (5-119)||(7446340-7446454)
chr2 (1-114)||(3025892-3026003)
chr2 (1-114)||(8972240-8972353)
chr2 (1-114)||(15552483-15552595)
chr2 (42-118)||(20495192-20495268)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-114)||(2096-2209)
scaffold0951 (1-114)||(1670-1783)
[»] scaffold0113 (1 HSPs)
scaffold0113 (3-122)||(28674-28793)
[»] scaffold0027 (2 HSPs)
scaffold0027 (9-119)||(42167-42277)
scaffold0027 (1-114)||(42587-42700)
[»] scaffold0007 (2 HSPs)
scaffold0007 (5-119)||(64300-64414)
scaffold0007 (2-120)||(64735-64853)
[»] scaffold1585 (1 HSPs)
scaffold1585 (5-114)||(570-679)
[»] scaffold1223 (2 HSPs)
scaffold1223 (1-114)||(1170-1283)
scaffold1223 (1-114)||(756-868)
[»] scaffold0432 (2 HSPs)
scaffold0432 (1-114)||(10301-10414)
scaffold0432 (10-121)||(9928-10039)
[»] scaffold0273 (2 HSPs)
scaffold0273 (1-114)||(4636-4749)
scaffold0273 (1-77)||(4243-4319)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-114)||(134102-134215)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-120)||(18832-18951)
scaffold0176 (20-114)||(19069-19163)
[»] scaffold0076 (1 HSPs)
scaffold0076 (14-124)||(8451-8561)
[»] scaffold0157 (2 HSPs)
scaffold0157 (1-96)||(16925-17020)
scaffold0157 (5-48)||(16565-16608)
[»] scaffold1696 (1 HSPs)
scaffold1696 (1-113)||(454-565)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-59)||(7717-7775)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-116)||(61887-62002)


Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 118 - 414
Target Start/End: Complemental strand, 29462937 - 29462639
Alignment:
Q  118 ttttaaatttgtaatgtaactttgaggtaaagtttatttacagacaagagcatatggttgctcatagcttcgctagggaggccaattcttatgctagcca 217  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29462937 ttttaaatttgcaatgtaactttgaagtaaagtttatttgcagacaagagcatatggttgctcatagcttcgctagggaggccaattcttatgctagcca 29462838  T
Q  218 ccttgttcatgattatgttcctctttgtattaactcttcattgattaatgaaatgagtgttaaatttattttcat---nnnnnnnnnttgcgtacataca 314  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||    
T  29462837 ccatgttcatgattatgttcctctttgtattaactcttcattgattaatgaaatgagtgttaaatttattttcataaaaaaaaaaaaatgcgtacataca 29462738  T
Q  315 aaatcacacattaattataaattttttcaacattttttacaccttaacaacatataggccatttttcaacactttgttacctcaaaacgacaaacatgcc 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29462737 aaatcacacattaattataaattttttcaacattttttacaccttaacaacatataggcca-ttttcaacactttgttacctcaaaacgacaaacatgcc 29462639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 50970707 - 50970826
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||||| |||| ||||||||||| |||    
T  50970707 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacc 50970806  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  50970807 aaaagtgtaattaagccttt 50970826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 21856472 - 21856585
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| | | |||| ||||||||||| |||    
T  21856472 gtaggacgaaaaatgcagcaaaaatgatacttgaaggaccgttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggacc 21856571  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  21856572 aaaagtgtaattaa 21856585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5963007 - 5963125
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| ||| |||||||| | |||||||| ||||||||||||||||| | |||| ||||||||||| |||    
T  5963007 gtaggacgaaaaatgcaacaaaaatgataattgaaagactgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacc 5963106  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||||||||    
T  5963107 aaaagtgtaattaaacctt 5963125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15646624 - 15646742
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || | |||||||||||| | |||| ||||||||||| |||    
T  15646624 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggacc 15646723  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  15646724 aaaagtgtaattaagcctt 15646742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8678657 - 8678544
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  8678657 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 8678558  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  8678557 aaaagtgtaattaa 8678544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17433644 - 17433757
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| || |||||||| |||    
T  17433644 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggacc 17433743  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  17433744 aaaagtgtaattaa 17433757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 4636403 - 4636513
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||| |||| |||||||||||| | |||| ||||||||||| ||||||    
T  4636403 ggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaa 4636502  T
Q  104 agtgtaattaa 114  Q
    |||||||||||    
T  4636503 agtgtaattaa 4636513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 39154449 - 39154567
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||  ||| || ||||||||| | |||| ||||||||||| |||    
T  39154449 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacc 39154548  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  39154549 aaaagtgtaattaagcctt 39154567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17433332 - 17433219
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||| | | |||| ||||||| ||| |||    
T  17433332 gtaggatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggacc 17433233  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  17433232 aaaagtgtaattaa 17433219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 18984235 - 18984122
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||  ||||||||||| |||    
T  18984235 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggacc 18984136  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  18984135 aaaagtgtaattaa 18984122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26859175 - 26859062
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| |||||||| || |||    
T  26859175 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggacc 26859076  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  26859075 aaaagtgtaattaa 26859062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29307069 - 29306956
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| | ||||| ||||||||| | |||| ||||||||||| | |    
T  29307069 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatc 29306970  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  29306969 aaaagtgtaattaa 29306956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29307371 - 29307484
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  29307371 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggacc 29307470  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||| ||||||    
T  29307471 aaaagtgcaattaa 29307484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29870048 - 29870161
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||| | | |||| ||||||||||| |||    
T  29870048 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggacc 29870147  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  29870148 aaaagtgtaattaa 29870161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5540247 - 5540367
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| || |||||||||| | || || ||||||||| | |||| ||||||||||| |||    
T  5540247 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttcttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggacc 5540346  T
Q  101 aaaagtgtaattaaacctttt 121  Q
    |||||||||||||| ||||||    
T  5540347 aaaagtgtaattaagcctttt 5540367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 18984548 - 18984666
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || || |||||| | |||| |||||||| || |||    
T  18984548 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggacc 18984647  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  18984648 aaaagtgtaattaagcctt 18984666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29869736 - 29869618
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||| |||||||||| |||| || ||||||||| | || | ||||||||||| |||    
T  29869736 gtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggacc 29869637  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  29869636 aaaagtgtaattaagcctt 29869618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5539932 - 5539819
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  5539932 gtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 5539833  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  5539832 aaaagtgtaattaa 5539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9019089 - 9018976
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||  | ||||||||| | |||| ||||||||||| |||    
T  9019089 gtaggacgaaaaatgcaacaaaaatgatagttgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggacc 9018990  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  9018989 aaaagtgtaattaa 9018976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15646308 - 15646195
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||| ||| ||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||| |||    
T  15646308 gtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 15646209  T
Q  101 aaaagtgtaattaa 114  Q
    |||||| |||||||    
T  15646208 aaaagtataattaa 15646195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33144348 - 33144461
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||| || ||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  33144348 gtaggacgaaaaatgcaacaaaaatgatatttgaaggtccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 33144447  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  33144448 aaaagtgtaattaa 33144461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39154135 - 39154022
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||| ||||||||||||||||| | || | ||||||| ||  |||    
T  39154135 gtaggacgaaaaatgcaacaaaaatgataattgcaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgacc 39154036  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  39154035 aaaagtgtaattaa 39154022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 50970394 - 50970281
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||  ||| || ||||||||| | |||| ||||||||||| |||    
T  50970394 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacc 50970295  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  50970294 aaaagtgtaattaa 50970281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 21856157 - 21856045
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacca 101  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||  ||||||||||| ||||    
T  21856157 taggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacca 21856058  T
Q  102 aaagtgtaattaa 114  Q
    |||||||||||||    
T  21856057 aaagtgtaattaa 21856045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8678970 - 8679083
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||||||| |||| || ||||| ||| | |||| ||||||||||| |||    
T  8678970 gtaggacgaaaaatgcaacaaaaatgataattgaatgacctttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggacc 8679069  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  8679070 aaaagtgtaattaa 8679083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9019392 - 9019505
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||  | |||||| || | |||| ||||||||||| |||    
T  9019392 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggacc 9019491  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  9019492 aaaagtgtaattaa 9019505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15173212 - 15173095
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||   |||||||| |||| ||  |||||||| | |||| ||||||||||| |||    
T  15173212 gtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggacc 15173113  T
Q  101 aaaagtgtaattaaacct 118  Q
    ||||||||||||||||||    
T  15173112 aaaagtgtaattaaacct 15173095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15173523 - 15173635
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||| |||||||| || |||||| || | |||| ||||||||||| |||    
T  15173523 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt-aaaaggcaggaccagttttgtgagtaggccaaaacacgaggacc 15173621  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  15173622 aaaagtgtaattaa 15173635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26859488 - 26859601
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||| |||| ||| |||||||| | |||  ||||||||||| | |    
T  26859488 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtattgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatc 26859587  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  26859588 aaaagtgtaattaa 26859601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 33144033 - 33143925
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||| |||||| ||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  33144033 gtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 33143934  T
Q  101 aaaagtgta 109  Q
    |||||||||    
T  33143933 aaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5962694 - 5962581
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||| ||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||  || ||||||||| |||||  || |||||||| |||    
T  5962694 gtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggacc 5962595  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  5962594 aaaaatgtaattaa 5962581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 52268406 - 52268288
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||| ||||||||||| ||||  |||| ||| |||||||| |||||||||| |||| || || |||||| |  ||| ||||| ||||| |||    
T  52268406 gtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggacc 52268307  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  52268306 aaaagtgtaattaagcctt 52268288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 2733416 - 2733499
Alignment:
Q  31 ttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaa 114  Q
    |||||||||||||||||| |||||||||| |||| || || |||||  |||||| |||||||| || ||||||||| |||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaa 2733499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 47827039 - 47826967
Alignment:
Q  42 ttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaa 114  Q
    ||||||||| |||||||| ||||||| || |||||| | |||  ||||||||||| |||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 47826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 4636080 - 4636033
Alignment:
Q  9 aaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaa 57  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  4636080 aaaaatgcaacaaaaatgatacttgaaggaccg-tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 275
Target Start/End: Original strand, 5877788 - 5877943
Alignment:
Q  119 tttaaatttgtaatgtaactttgaggtaaagtttatttacagacaagagcatatggttgctcatagcttcgctagggaggccaattcttatgctagccac 218  Q
    |||| ||||| |||||||||||||| | |||||||| |  || |||| | || |||| |||||||| || ||||| |  | ||||| |||||||||||||    
T  5877788 tttagatttgcaatgtaactttgagatgaagtttatatggaggcaagcgaatttggtagctcatagtttagctagagctgtcaatttttatgctagccac 5877887  T
Q  219 cttgttcatgattatgttcctctttgtattaactcttcattgattaatgaaatgagt 275  Q
        |||||||||||||||| | |||||||  ||| | ||| | |||||||||||||    
T  5877888 taaattcatgattatgttcc-ccttgtatttcctcgttatttaataatgaaatgagt 5877943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 33328274 - 33328156
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||| ||||||||||| |||    
T  33328274 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacc 33328175  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||||||||    
T  33328174 aaaagtgtaattaaacctt 33328156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13225068 - 13225187
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  13225068 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 13225167  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  13225168 aaaagtgtaattaagccttt 13225187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 9178071 - 9178177
Alignment:
Q  8 gaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtg 107  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||| | |||| ||||||||||| ||||||||||    
T  9178071 gaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtg 9178170  T
Q  108 taattaa 114  Q
    |||||||    
T  9178171 taattaa 9178177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 31133336 - 31133223
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| |||  || ||||||||| | |||||||||||||||| |||    
T  31133336 gtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggacc 31133237  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  31133236 aaaagtgtaattaa 31133223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 41681250 - 41681137
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  41681250 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 41681151  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  41681150 aaaagtgtaattaa 41681137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9929025 - 9928912
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||  ||||||||||| |||    
T  9929025 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacc 9928926  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  9928925 aaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11656571 - 11656458
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| | || ||||||||||||||||||  ||||||||| ||||||| ||||||||| | |||| ||||||||||| |||    
T  11656571 gtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 11656472  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  11656471 aaaagtgtaattaa 11656458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19176719 - 19176832
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||| ||| | |||| ||||||||||| |||    
T  19176719 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggacc 19176818  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  19176819 aaaagtgtaattaa 19176832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 31133653 - 31133762
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    ||||||||||||||||||||  ||| |||||||||||||||||| |||||||||| |||| |||||||||||| | |||| ||||||||||| |||||||    
T  31133653 gacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 31133752  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  31133753 gtgtaattaa 31133762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34540977 - 34541090
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||  ||| || ||||||||| | |||| ||||||||||| |||    
T  34540977 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacc 34541076  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  34541077 aaaagtgtaattaa 34541090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41681563 - 41681676
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || | || ||||||||| | |||| ||||||||||| |||    
T  41681563 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggacc 41681662  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  41681663 aaaagtgtaattaa 41681676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12572280 - 12572396
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||  ||||||  |||||||| | |||  ||||||||||| |||    
T  12572280 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggacc 12572379  T
Q  101 aaaagtgtaattaaacc 117  Q
    |||||||||||||||||    
T  12572380 aaaagtgtaattaaacc 12572396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 19176403 - 19176293
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| ||  |||||||| | |||| ||||||||||| ||||||    
T  19176403 ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaa 19176304  T
Q  104 agtgtaattaa 114  Q
    |||||||||||    
T  19176303 agtgtaattaa 19176293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9930086 - 9930205
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| | |||||||| |||| || ||||||||| | |||| ||||| ||||| |||    
T  9930086 gtaggacgaaaaatgcaacaaaaatgatagttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggacc 9930185  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  9930186 aaaagtgtaattaagccttt 9930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11656886 - 11657005
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| | |  || ||||||||| | |||| ||||||||||| |||    
T  11656886 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggacc 11656985  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  11656986 aaaagtgtaattaagccttt 11657005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 33328572 - 33328682
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||  |||||||| | ||||  |||||||||| ||||||    
T  33328572 ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaa 33328671  T
Q  104 agtgtaattaa 114  Q
    ||| |||||||    
T  33328672 agtctaattaa 33328682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44831363 - 44831245
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||| |||||||||| |||| || || |||||| | |||| ||||||| ||| |||    
T  44831363 gtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggacc 44831264  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  44831263 aaaagtgtaattaagcctt 44831245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 12571978 - 12571866
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacca 101  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| || |  | ||||||||| | |||| ||||||||||| ||||    
T  12571978 taggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggacca 12571879  T
Q  102 aaagtgtaattaa 114  Q
    |||||||||||||    
T  12571878 aaagtgtaattaa 12571866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33743037 - 33742925
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||| |||||| |||| ||||| |||||||| ||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  33743037 gtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggacc 33742939  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  33742938 aaaagtgtaattaa 33742925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13224756 - 13224645
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||| ||||||||| |||| ||||||||  |||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||  |||    
T  13224756 gtaggacgaaaaattcaacaaaaatgataattgaaggattgttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagacc 13224658  T
Q  101 aaaagtgtaatta 113  Q
    |||||||||||||    
T  13224657 aaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 4629909 - 4629800
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||| ||||| |||| ||||| |||||||||||| | |||||||| |||| || ||||||||| |||| | |||||||||||||  ||||    
T  4629909 gacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaa 4629810  T
Q  105 gtgtaattaa 114  Q
    ||| ||||||    
T  4629809 gtgcaattaa 4629800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44831674 - 44831787
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||| |||||  ||||||||||| ||||||||||  ||| || ||||||||| | || | ||||||||||| |||    
T  44831674 gtaggaccaaaaatgcaacaaaaatgataattgaataaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacc 44831773  T
Q  101 aaaagtgtaattaa 114  Q
    |||||||| |||||    
T  44831774 aaaagtgttattaa 44831787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33743348 - 33743411
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggca 64  Q
    |||||||||||||||||||||||| |||| |||||  ||||||||||| |||||||||||||||    
T  33743348 gtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgttttgttctgttttaaaaaggca 33743411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 8073985 - 8074098
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||| ||||||||||||||  |||| ||||||||   ||||||| |||||||||| | |||||||| |||||| |||||| ||||||||||| |||||||    
T  8073985 gacgtaaaatgcaacaaaat-gataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaa 8074083  T
Q  105 gtgtaattaaacctt 119  Q
    || ||| ||| ||||    
T  8074084 gtataactaagcctt 8074098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 11336959 - 11337064
Alignment:
Q  9 aaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgt 108  Q
    |||||||||||||||| |||| ||||| ||||||||| || |||||||||| |||  || || |||||| | || | ||||||||||  |||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  109 aattaa 114  Q
    ||||||    
T  11337059 aattaa 11337064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 26159175 - 26159294
Alignment:
Q  130 aatgtaactttgaggtaaagtttatttacagacaagagcatatggttgctcatagcttcgctagggag-gccaattcttatgctagccaccttgttcatg 228  Q
    ||||||||||| |||| ||||||||    ||||||| | || |||| |||||||| || |||||||   |||||||||||| |||||||||  |||||||    
T  26159175 aatgtaacttttaggtgaagtttatacggagacaagcgaatttggtagctcatagtttagctagggtttgccaattcttattctagccaccaagttcatg 26159274  T
Q  229 attatgttcctctttgtatt 248  Q
    |||||||||||| |||||||    
T  26159275 attatgttcctccttgtatt 26159294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 10918235 - 10918125
Alignment:
Q  8 gaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtg 107  Q
    ||||||||||||||||| |||| |||||||||  ||||| | ||||||||  ||||| || || |||||| | |||  ||||||||||| || |||| ||    
T  10918235 gaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtgagtagatcaaaacacgaggacaaaaaatg 10918136  T
Q  108 taattaaacct 118  Q
    |||||||||||    
T  10918135 taattaaacct 10918125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 4630245 - 4630330
Alignment:
Q  31 ttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaaac 116  Q
    ||||||||||||| | || ||||||||||| ||| || || |||||| | |||  ||||||||||  | |||||||||||||||||    
T  4630245 ttgaaggaccgttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaaac 4630330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 43958301 - 43958264
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaagga 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  43958301 gtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41046816 - 41046700
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||||| |||| ||||||||||| |||    
T  41046816 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggacc 41046717  T
Q  101 aaaagtgtaattaaacc 117  Q
    |||||||||||||||||    
T  41046716 aaaagtgtaattaaacc 41046700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20840990 - 20841110
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| || ||||||||| | |||| ||||||||||| |||    
T  20840990 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcacc 20841089  T
Q  101 aaaagtgtaattaaacctttt 121  Q
    |||||||||||||| ||||||    
T  20841090 aaaagtgtaattaagcctttt 20841110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17464607 - 17464494
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||  |||||| ||||||||||| |||    
T  17464607 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggacc 17464508  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  17464507 aaaagtgtaattaa 17464494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 32535075 - 32534955
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| || || |||||| | || | ||||||||||| |||    
T  32535075 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggacc 32534976  T
Q  101 aaaagtgtaattaaacctttt 121  Q
    |||||||||||||||||||||    
T  32534975 aaaagtgtaattaaacctttt 32534955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 5137096 - 5136974
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| || |||||| | | || ||||||||||| |||    
T  5137096 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggacc 5136997  T
Q  101 aaaagtgtaattaaaccttttaa 123  Q
    |||||||||||||||||| ||||    
T  5136996 aaaagtgtaattaaacctattaa 5136974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 20840676 - 20840563
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| | ||||||||||||| || ||||||||| | |||| ||||||||||| |||    
T  20840676 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacc 20840577  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  20840576 aaaagtgtaattaa 20840563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 43973557 - 43973444
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||| |||| |||||| | |||| ||||||||||| |||    
T  43973557 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggacc 43973458  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  43973457 aaaagtgtaattaa 43973444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37727045 - 37726925
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||  | |||||||||||  ||  ||||||||||| |||    
T  37727045 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggacc 37726946  T
Q  101 aaaagtgtaattaaacctttt 121  Q
    |||||||||||||| ||||||    
T  37726945 aaaagtgtaattaagcctttt 37726925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27393777 - 27393659
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || |||||| || | |||| ||||||||||| |||    
T  27393777 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggacc 27393678  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  27393677 aaaagtgtaattaagcctt 27393659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 31779084 - 31779194
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| ||||||    
T  31779084 ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaa 31779183  T
Q  104 agtgtaattaa 114  Q
    |||||||||||    
T  31779184 agtgtaattaa 31779194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4275793 - 4275906
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||  |||||| ||||||||| | |||| ||||||||||| |||    
T  4275793 gtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggacc 4275892  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  4275893 aaaagtgtaattaa 4275906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24300985 - 24301098
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  24300985 gtaggacgaaaaatgcaacaaaaatgatactcgaaggaccgttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggacc 24301084  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  24301085 aaaagtgtaattaa 24301098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 39555694 - 39555575
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||| ||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  39555694 gtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacc 39555595  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  39555594 aaaagtgtaattaagccttt 39555575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30098192 - 30098310
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| || ||||||||| | || | ||||||||||| |||    
T  30098192 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggacc 30098291  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  30098292 aaaagtgtaattaagcctt 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 48453105 - 48452995
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||  |||    
T  48453105 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgatgacc 48453006  T
Q  101 aaaagtgtaat 111  Q
    |||||||||||    
T  48453005 aaaagtgtaat 48452995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22424930 - 22424817
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| | ||  | ||||||||||| ||||   |||||||||||||    
T  22424930 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaacc 22424831  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  22424830 aaaagtgtaattaa 22424817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25853350 - 25853237
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||| | |||||||| ||||||| || |||||| | |||| ||||||||||| |||    
T  25853350 gtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggacc 25853251  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  25853250 aaaagtgtaattaa 25853237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37727359 - 37727472
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||  ||| || ||||||||| | |||| ||||||| ||| |||    
T  37727359 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggacc 37727458  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  37727459 aaaagtgtaattaa 37727472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 39556006 - 39556119
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  39556006 gtaggacgaaaaatgcaacgaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 39556105  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  39556106 aaaagtgtaattaa 39556119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43973869 - 43973982
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| ||||  | ||||||||| | |||| ||||||||||| |||    
T  43973869 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggacc 43973968  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  43973969 aaaagtgtaattaa 43973982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 23644578 - 23644458
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| |||||||||| |||| || || |||||| | |||| ||||| ||||| |||    
T  23644578 gtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggacc 23644479  T
Q  101 aaaagtgtaattaaacctttt 121  Q
    |||||||||||||| ||||||    
T  23644478 aaaagtgtaattaagcctttt 23644458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25853656 - 25853769
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| | || || ||||||||| | ||| |||||||||||| | |    
T  25853656 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatc 25853755  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  25853756 aaaagtgtaattaa 25853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 29801468 - 29801359
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| || |||||| || | || | ||||||||||  |||||||    
T  29801468 gacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgaccaaaa 29801369  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  29801368 gtgtaattaa 29801359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30104598 - 30104485
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||| | || |||||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  30104598 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggacc 30104499  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  30104498 aaaagtgtaattaa 30104485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22425242 - 22425354
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||| || ||||||| ||| ||||| | |||| | ||||||||| |||    
T  22425242 gtaggacgaaaaatgcaacaaaaatgataattgaagtaccgttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggacc 22425341  T
Q  101 aaaagtgtaatta 113  Q
    |||||||||||||    
T  22425342 aaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 31778769 - 31778650
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||   |||||||||||||||| |||||||||| |||| || ||||||| | | |||  ||||||||||| |||    
T  31778769 gtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggacc 31778670  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  31778669 aaaagtgtaattaagccttt 31778650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27394006 - 27394124
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| | ||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||| || |  |||||| | |||| ||||||||||| |||    
T  27394006 gtaggatggaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggacc 27394105  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  27394106 aaaagtgtaattaagcctt 27394124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 29801848 - 29801958
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || ||||||||| | |||| ||||| ||||| | ||||    
T  29801848 ggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaa 29801947  T
Q  104 agtgtaattaa 114  Q
    |||||||||||    
T  29801948 agtgtaattaa 29801958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32535387 - 32535505
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaa-----gatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacga 95  Q
    ||||||||||||||||||||||||      |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||    
T  32535387 gtaggacgaaaaatgcaacaaaaatttaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacga 32535486  T
Q  96 gaaccaaaagtgtaattaa 114  Q
    | |||||||||||||||||    
T  32535487 ggaccaaaagtgtaattaa 32535505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 26274679 - 26274562
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||  ||||| || || | |||||    
T  26274679 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaa 26274580  T
Q  105 gtgtaattaaacctttta 122  Q
     |||||||||||||||||    
T  26274579 atgtaattaaacctttta 26274562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26837476 - 26837359
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||| ||||| |||| || || |||||| | |||| ||||| || || |||    
T  26837476 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaaggacc 26837377  T
Q  101 aaaagtgtaattaaacct 118  Q
    |||| |||||||||||||    
T  26837376 aaaaatgtaattaaacct 26837359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26837785 - 26837897
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||| | |||| ||| ||||  | ||||||||||| |||| ||||||||||| |||    
T  26837785 gtaggacaaaaaatgcaacaaaaatgatacttgaatgaccgttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggacc 26837883  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  26837884 aaaagtgtaattaa 26837897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 51474763 - 51474876
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||  | ||||||  |||||||||||||||||| ||||||| || |||||| | || | ||||||||| |||||    
T  51474763 gtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaacacgggaacc 51474862  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  51474863 aaaagtgtaattaa 51474876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25612406 - 25612522
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| || || ||| |||||||| | |||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  25612406 gtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggacc 25612505  T
Q  101 aaaagtgtaattaaacc 117  Q
    |||||||||||||||||    
T  25612506 aaaagtgtaattaaacc 25612522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23228437 - 23228549
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||| ||||| |||| |||||||||  |||||||  ||||||||| |||||||||| |||||| | |||| ||||||||| | |||    
T  23228437 gtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaacacggggacc 23228535  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  23228536 aaaagtgtaattaa 23228549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23644894 - 23645007
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| ||||||||||||||||| |||| ||||| |||||||||||| |||||||||| || | || || |||||| | |||| ||||||||||| |||    
T  23644894 gtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggacc 23644993  T
Q  101 aaaagtgtaattaa 114  Q
    |||||| |||||||    
T  23644994 aaaagtataattaa 23645007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 24300669 - 24300553
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||| ||||||||||| |||| |||||| |||||||| || |||||||||| | || || ||||||||| |||| | ||||||||||| ||||||    
T  24300669 ggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacgag-accaaa 24300571  T
Q  104 agtgtaattaaacctttt 121  Q
    | ||||||||||||||||    
T  24300570 aatgtaattaaacctttt 24300553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 5137411 - 5137523
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacca 101  Q
    |||||| |||||||||||||||| |||| |||||||||| ||||||| | |||||||| ||||  | ||||||| | | |||| ||||||||||| ||||    
T  5137411 taggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggacca 5137510  T
Q  102 aaagtgtaattaa 114  Q
    |||||||||||||    
T  5137511 aaagtgtaattaa 5137523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 50116838 - 50116951
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||| ||||||||||| ||||  |||| |||||||||||| | ||| |||| ||||||| || |||||| | || | ||||||||||| | |    
T  50116838 gtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaacacgaggatc 50116937  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  50116938 aaaagtgtaattaa 50116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 51473542 - 51473431
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    ||||| |||| ||||||||||| ||||   |||||||  ||||||| |||||||||| |||| || || |||||| |||||  ||||||||||| |||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  103 aagtgtaattaa 114  Q
    ||||||||||||    
T  51473442 aagtgtaattaa 51473431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 17464929 - 17465039
Alignment:
Q  9 aaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgt 108  Q
    |||||||||||||||| |||| |||||||||||||||||| | |||||||| ||   || ||||||| |   |||| ||||||||||| ||||||| |||    
T  17464929 aaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgt 17465028  T
Q  109 aattaaacctt 119  Q
    |||||| ||||    
T  17465029 aattaagcctt 17465039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26274996 - 26275112
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||| |||||||||| |||| |||| |||||||||| || |||||||||| || | || ||||||||| | |||| |||||||| ||  ||    
T  26274996 gtaggacgaaaaa-gcaacaaaaatgataattgagggaccgttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggcc 26275094  T
Q  101 aaaagtgtaattaaacct 118  Q
    |||| | |||||||||||    
T  26275095 aaaattataattaaacct 26275112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32697129 - 32697242
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||| ||  ||||||| |||||||||| ||| |||  | |||||| | ||||  |||||||||| |||    
T  32697129 gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggacc 32697228  T
Q  101 aaaagtgtaattaa 114  Q
    |||| | |||||||    
T  32697229 aaaaatataattaa 32697242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 45966049 - 45965941
Alignment:
Q  6 acgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaag 105  Q
    ||||||||||||||| ||| |||| | |||||||  ||||||||||||||||||  ||| ||| |  ||||| | || | ||||||||||| ||||||||    
T  45966049 acgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaag 45965950  T
Q  106 tgtaattaa 114  Q
    |||||||||    
T  45965949 tgtaattaa 45965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 37222030 - 37222113
Alignment:
Q  31 ttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaa 114  Q
    ||||||||  |||||||| |||||||||| |||| || || ||| || | |||||||||||||||| |||||||||||||||||    
T  37222030 ttgaaggatggttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaa 37222113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41047128 - 41047245
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||| |||||| || |||||||||| | ||  | ||||||||| | |||| ||||||| || |  |    
T  41047128 gtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacatga-agac 41047225  T
Q  101 aaaagtgtaattaaaccttt 120  Q
     |||||||||||||||||||    
T  41047226 gaaagtgtaattaaaccttt 41047245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 25420574 - 25420683
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    ||||||||||||||||||||  ||| |||||||||  |||| || | |||||||| ||| |||||| |||||| | |||| ||||| ||||  | |||||    
T  25420574 gacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaatacgatgatcaaaa 25420673  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  25420674 gtgtaattaa 25420683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 32695817 - 32695704
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    ||||| |||| |||||||||||  ||| | | |||||  ||||||| |||||||||||| ||| |||| |||||||| |||| ||||| | ||| |||||    
T  32695817 aggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaaatatgaggaccaa 32695718  T
Q  103 aagtgtaattaaac 116  Q
    || |||||||||||    
T  32695717 aaatgtaattaaac 32695704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37220673 - 37220560
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||| ||||||||||| ||||  ||||||||  |||| || ||||||||||  ||||||||  | | || | |||| ||||| ||||| |||    
T  37220673 gtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggacc 37220574  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  37220573 aaaagtgtaattaa 37220560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 18010176 - 18010232
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaa 59  Q
    |||||||||||||||||||||| |||| |||||  ||  ||||||| ||||||||||    
T  18010176 aggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaa 18010232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37786883 - 37786764
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| || ||||||||||| |||| ||||||||||| |||    
T  37786883 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacc 37786784  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  37786783 aaaagtgtaattaagccttt 37786764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19830536 - 19830419
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  19830536 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 19830437  T
Q  101 aaaagtgtaattaaacct 118  Q
    ||||||||||||||||||    
T  19830436 aaaagtgtaattaaacct 19830419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19590954 - 19591067
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  19590954 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtacc 19591053  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  19591054 aaaagtgtaattaa 19591067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34534220 - 34534333
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||  |||| |||||||||||| | |||| |||||||||||||||    
T  34534220 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaacc 34534319  T
Q  101 aaaagtgtaattaa 114  Q
    |||||| |||||||    
T  34534320 aaaagtataattaa 34534333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 19590641 - 19590528
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  19590641 gtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 19590542  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  19590541 aaaagtgtaattaa 19590528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29099966 - 29099863
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| |||||||||||| | |||| ||||||||||| |||    
T  29099966 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacc 29099867  T
Q  101 aaaa 104  Q
    ||||    
T  29099866 aaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4641556 - 4641438
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||  ||| || ||||||||| | || | ||||||||||| |||    
T  4641556 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggacc 4641457  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||||||||    
T  4641456 aaaagtgtaattaaacctt 4641438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23952847 - 23952733
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaataggg-caaaacacgagaac 99  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||||| ||||||| || |||||| | ||||| ||||||||||| ||    
T  23952847 gtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggac 23952748  T
Q  100 caaaagtgtaattaa 114  Q
    |||||||||||||||    
T  23952747 caaaagtgtaattaa 23952733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32004730 - 32004617
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||| |||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| ||||| |||||| | |||| ||||||||||| |||    
T  32004730 gtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggacc 32004631  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  32004630 aaaagtgtaattaa 32004617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38859070 - 38859183
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  38859070 gtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 38859169  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  38859170 aaaagtgtaattaa 38859183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32005043 - 32005156
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||| | |||||||| ||||||| ||||||||| | || | ||||||| ||| |||    
T  32005043 gtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggacc 32005142  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  32005143 aaaagtgtaattaa 32005156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35289019 - 35288906
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| || ||||||||| | |||| ||||| ||||  |||    
T  35289019 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgacc 35288920  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  35288919 aaaagtgtaattaa 35288906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 35289334 - 35289443
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    ||||||||||||||| |||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| | |||||    
T  35289334 gacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaa 35289433  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  35289434 gtgtaattaa 35289443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29100280 - 29100400
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || || ||| || | |||  ||||||||||| |||    
T  29100280 gtaggacaaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggacc 29100379  T
Q  101 aaaagtgtaattaaacctttt 121  Q
    |||||||||||||||||||||    
T  29100380 aaaagtgtaattaaacctttt 29100400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 19830856 - 19830967
Alignment:
Q  9 aaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgt 108  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||| | || || |||||| || | |||| ||||||||||| |||||||||||    
T  19830856 aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgt 19830955  T
Q  109 aattaaaccttt 120  Q
    |||||| |||||    
T  19830956 aattaagccttt 19830967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 2658951 - 2658842
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| |||||||||| ||||||| | |||||||| |||| || ||||||||| | |||| ||||||||||| || ||||    
T  2658951 gacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaa 2658852  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  2658851 gtgtaattaa 2658842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2659269 - 2659382
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| ||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || ||||||| | |||||| |||||| |||| |||    
T  2659269 gtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggacc 2659368  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  2659369 aaaattgtaattaa 2659382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 34533907 - 34533794
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||| ||||||||||||||| |||| ||||| |||| |||| || ||||||||||  |||||| ||||||||| | |||| ||||||||||| |||    
T  34533907 gtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggacc 34533808  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  34533807 aaaagtgtaattaa 34533794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37787196 - 37787309
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||| || |||||||  ||| || ||||||||| | |||| ||||||||||| |||    
T  37787196 gtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacc 37787295  T
Q  101 aaaagtgtaattaa 114  Q
    |||||| |||||||    
T  37787296 aaaagtataattaa 37787309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38858759 - 38858640
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||| ||||| |||||||||||| ||||||||||  ||| || ||||||||| | || | ||||||||||| |||    
T  38858759 gtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacc 38858660  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||| ||||| |||||    
T  38858659 aaaagtgttattaagccttt 38858640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38161067 - 38160954
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||||||||||  ||| |||||||||  ||||||| |||||||||| |||| ||| | |||||| | |||| |||||| |||| |||    
T  38161067 gtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggacc 38160968  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  38160967 aaaagtgtaattaa 38160954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4641873 - 4641983
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||| | || || ||||   || | |||| ||||||||||| |||    
T  4641873 gtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggacc 4641969  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  4641970 aaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 23953162 - 23953268
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||| ||| |||  || ||||||||| | |||  ||||||||||| |||||||    
T  23953162 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaa 23953261  T
Q  105 gtgtaat 111  Q
     ||||||    
T  23953262 atgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 4478133 - 4478246
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| |||||||||  | || || |||||||||| |||| || ||||||||| | |||| ||||||||||| | |||||    
T  4478133 gacgaaaaatgcaacaaaaatgataattgaaggacaatgttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaa 4478232  T
Q  105 gtgtaattaaacct 118  Q
    ||||| ||||||||    
T  4478233 gtgtacttaaacct 4478246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28583555 - 28583442
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||| ||||| |||| ||||||||| ||||| ||||||||||||| ||||  | || | || | | |||| ||||||||||| |||    
T  28583555 gtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaacacgaggacc 28583456  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  28583455 aaaagtgtaattaa 28583442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 28584355 - 28584464
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||| ||||||||| |||| |||||||||  ||||||| |||||||||| | ||||| || |||||| |||||| |||| |||||| || ||||    
T  28584355 gacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaagcacgaggacgaaaa 28584454  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  28584455 gtgtaattaa 28584464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 11052 - 11165
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| || ||||||||||| |||| ||||||||||| |||    
T  11052 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacc 11151  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  11152 aaaagtgtaattaa 11165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10737 - 10642
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgag 96  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||| || ||||||| | | |||| |||||||||||    
T  10737 gtaggacgaaaaatgcaacgaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgag 10642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 9e-37; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 12234758 - 12234880
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||||||||| | |||| ||||||||||| |||    
T  12234758 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacc 12234857  T
Q  101 aaaagtgtaattaaaccttttaa 123  Q
    |||||| ||||||| || |||||    
T  12234858 aaaagtataattaagccatttaa 12234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 54995498 - 54995613
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacca 101  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||| ||||||||||||||||| | |||| ||||||||||| ||||    
T  54995498 taggacgaaaaatgcaacaaaat-gatacttgaaggaccgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 54995596  T
Q  102 aaagtgtaattaaacct 118  Q
    |||||||||||||||||    
T  54995597 aaagtgtaattaaacct 54995613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 20470940 - 20471053
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| || |||| ||||||||||| |||| ||||||||||| |||    
T  20470940 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggacc 20471039  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  20471040 aaaagtgtaattaa 20471053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23494872 - 23494985
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  23494972 aaaagtgtaattaa 23494985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 45082853 - 45082966
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | || | ||||||||||| |||    
T  45082853 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggacc 45082952  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  45082953 aaaagtgtaattaa 45082966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 18751712 - 18751597
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||  | | |||| ||||||||||| ||||||    
T  18751712 ggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaa 18751613  T
Q  104 agtgtaattaaacctt 119  Q
    ||||||||||||||||    
T  18751612 agtgtaattaaacctt 18751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4219988 - 4220105
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||| ||||||| ||||||||||  ||| |||||||||||| | |||| ||||||||||| |||    
T  4219988 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggacc 4220087  T
Q  101 aaaagtgtaattaaacct 118  Q
    ||||||||||||||||||    
T  4220088 aaaagtgtaattaaacct 4220105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 11153576 - 11153689
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  11153576 gtaggacgaaaaatgcaacaaaaatgataattgaaggaacgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacc 11153675  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  11153676 aaaagtgtaattaa 11153689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25447363 - 25447250
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||| | | |||| ||||||||||| |||    
T  25447363 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggacc 25447264  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  25447263 aaaagtgtaattaa 25447250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 22170366 - 22170485
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||| || || |||||| | |||| ||||||||||| |||    
T  22170366 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggacc 22170464  T
Q  101 aaaagtgtaattaaacctttt 121  Q
    |||||||||||||| ||||||    
T  22170465 aaaagtgtaattaagcctttt 22170485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 18763951 - 18764062
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||| | ||||| ||||||||| | |||| ||||||||||| |||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  103 aagtgtaattaa 114  Q
    ||||||||||||    
T  18764051 aagtgtaattaa 18764062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 48526610 - 48526729
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||  ||||||||||| |||    
T  48526610 gtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggacc 48526709  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||| |||||||||||||    
T  48526710 aaaagtataattaaaccttt 48526729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15523663 - 15523781
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| |||| || ||||||||| | |||  ||||||||||  |||    
T  15523663 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgacc 15523762  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  15523763 aaaagtgtaattaagcctt 15523781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12234445 - 12234332
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || ||||||||| |||| | ||||||| ||| |||    
T  12234445 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggacc 12234346  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  12234345 aaaagtgtaattaa 12234332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15523351 - 15523238
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||| |||||  ||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  15523351 gtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 15523252  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  15523251 aaaagtgtaattaa 15523238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22434295 - 22434182
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | || | ||||||||||| |||    
T  22434295 gtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggacc 22434196  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  22434195 aaaagtgtaattaa 22434182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25447665 - 25447778
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||  |||    
T  25447665 gtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagacc 25447764  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  25447765 aaaagtgtaattaa 25447778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33109893 - 33110006
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| || || |||||| |  ||| ||||||| ||| |||    
T  33109893 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaacatgaggacc 33109992  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  33109993 aaaagtgtaattaa 33110006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38962248 - 38962361
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||  || ||||||||| |||||  ||||||||||| |||    
T  38962248 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggacc 38962347  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  38962348 aaaaatgtaattaa 38962361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 46193521 - 46193408
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  46193521 gtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 46193422  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  46193421 aaaagtgtaattaa 46193408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 46193834 - 46193947
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  46193834 gtaggacgaaaaatgcaataaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 46193933  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  46193934 aaaagtgtaattaa 46193947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 48526312 - 48526199
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||    ||||||| | | |||| |||||||||||||||    
T  48526312 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaacc 48526213  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  48526212 aaaagtgtaattaa 48526199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 54995185 - 54995068
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || | ||  |||||||| | |||| ||| ||||||| |||    
T  54995185 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggacc 54995086  T
Q  101 aaaagtgtaattaaacct 118  Q
    ||||||||||||||||||    
T  54995085 aaaagtgtaattaaacct 54995068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2118409 - 2118296
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||  |||||||||||||||||| |||| || || |||||| | |||| |||||||| || |||    
T  2118409 gtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggacc 2118310  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  2118309 aaaagtgtaattaa 2118296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4219673 - 4219560
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  4219673 gtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacc 4219574  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  4219573 aaaaatgtaattaa 4219560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22434606 - 22434722
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| || ||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  22434606 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacc 22434704  T
Q  101 aaaagtgtaattaaacct 118  Q
    |||| |||||||||||||    
T  22434705 aaaaatgtaattaaacct 22434722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33109800 - 33109687
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||  ||| || ||||||||| | || | ||||||||||| |||    
T  33109800 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacc 33109701  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  33109700 aaaaatgtaattaa 33109687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 11153262 - 11153142
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| || | |||||||| ||||||| || ||| || | |||| ||||||||||| |||    
T  11153262 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggacc 11153163  T
Q  101 aaaagtgtaattaaacctttt 121  Q
    |||||| ||||||| ||||||    
T  11153162 aaaagtataattaagcctttt 11153142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2118724 - 2118843
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |  | || ||||||| | |  ||| ||||||||||  |||    
T  2118724 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagacc 2118823  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    ||||||||||||||||||||    
T  2118824 aaaagtgtaattaaaccttt 2118843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 25937784 - 25937673
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | ||||  |||||||||| |||||    
T  25937784 aggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaa 25937685  T
Q  103 aagtgtaattaa 114  Q
    || |||||||||    
T  25937684 aaatgtaattaa 25937673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25938100 - 25938219
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||| ||||||||| |||||||| |||||||||| |||| || || |||||| | |||| |||||||| || |||    
T  25938100 gtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggacc 25938199  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  25938200 aaaagtgtaattaagccttt 25938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23494559 - 23494446
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||| ||||| |||| ||||||||||| |||||| |||||||||| |||| ||  |||||||| | |||| ||||||||||| |||    
T  23494559 gtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggacc 23494460  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  23494459 aaaaatgtaattaa 23494446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 51020913 - 51020800
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||| |||| || |||||| || |||  | ||||||| ||| | |    
T  51020913 gtaggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatc 51020814  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  51020813 aaaagtgtaattaa 51020800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 51021225 - 51021337
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||  |||| || ||||||||||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| | |    
T  51021225 gtaggacgaaaaatgcaacaaaat-gataattaaaggaccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatc 51021323  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  51021324 aaaagtgtaattaa 51021337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16691052 - 16690933
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||   ||||||| ||||||||| ||||| || || |||||| | |||  |||||||| || |||    
T  16691052 gtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaacacaaggacc 16690953  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||| |||||||||||||||    
T  16690952 aaaaatgtaattaaaccttt 16690933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 48713777 - 48713892
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    |||||||||||||||||||||| |||| |||||||||  ||||||| ||||||||||  |||||| || |||| | | ||||  ||||||||||||  ||    
T  48713777 aggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaa 48713876  T
Q  103 aagtgtaattaaacct 118  Q
    ||||||||||||||||    
T  48713877 aagtgtaattaaacct 48713892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44892577 - 44892690
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||||||||||| ||| ||||| ||| |||||||| |||||||||| ||||  | || |||||| | |||| ||||||||||| |||    
T  44892577 gtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggacc 44892676  T
Q  101 aaaagtgtaattaa 114  Q
    |||| | |||||||    
T  44892677 aaaaatataattaa 44892690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 45082547 - 45082431
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| | |||||||| ||||  | ||| ||||| | |||  ||||||||||  |||    
T  45082547 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgacc 45082449  T
Q  101 aaaagtgtaattaaacct 118  Q
    ||||| ||||||||||||    
T  45082448 aaaagcgtaattaaacct 45082431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12503552 - 12503457
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgag 96  Q
    |||||||||||||||||||||||| |||| |||||||||  ||||||| |||||||||| |||  |||||||||||| | || | |||||||||||    
T  12503552 gtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgag 12503457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 44890626 - 44890511
Alignment:
Q  8 gaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtg 107  Q
    |||||||||||||||||| ||| || |||||   ||||||| |||||||||| ||||||| || |||||| |||||| |||||||| || ||||||| ||    
T  44890626 gaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaacacaaggaccaaaattg 44890527  T
Q  108 taattaaaccttttaa 123  Q
    ||||||| | ||||||    
T  44890526 taattaagcattttaa 44890511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 48293708 - 48293597
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    |||| ||||||||||||||||| |||| |||||| ||  ||||||| ||||||||| || || ||||| |||||| | || | ||||||||||| |||||    
T  48293708 aggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggaccaa 48293609  T
Q  103 aagtgtaattaa 114  Q
    ||||||||||||    
T  48293608 aagtgtaattaa 48293597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 48708401 - 48708298
Alignment:
Q  11 aaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaa 110  Q
    |||||||||||||| |||| ||||||||| |||||||| |||||||||| |||| ||||| ||||||   |||| ||||||||  | |||||||||||||    
T  48708401 aaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaa 48708302  T
Q  111 ttaa 114  Q
    ||||    
T  48708301 ttaa 48708298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35363029 - 35363143
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaag-gcatgatcagtttcgtaaatagggcaaaacacgagaac 99  Q
    |||| ||||||||||||||||||| |||| ||||| |||||||||||| | |||| ||||| |||  | ||||||||| | |||| ||||||||||| |     
T  35363029 gtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggat 35363128  T
Q  100 caaaagtgtaattaa 114  Q
    |||||||||||||||    
T  35363129 caaaagtgtaattaa 35363143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43243709 - 43243804
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgag 96  Q
    ||||||| |||||||||||||||| |||| |||||| ||  ||||||| |||||||||| ||||||| || |||||| | |||| |||||||||||    
T  43243709 gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgag 43243804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 20958296 - 20958401
Alignment:
Q  9 aaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgt 108  Q
    |||||||||||||||| |||| |||||||||   |||||| |||||||||| |||| || || |||||| | |||| ||||| ||||| || ||||||||    
T  20958296 aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggactaaaagtgt 20958395  T
Q  109 aattaa 114  Q
    ||||||    
T  20958396 aattaa 20958401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43242386 - 43242325
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaagg 62  Q
    |||||||||||||||||| ||||| |||| ||||| |||||||||||| |||||||||||||    
T  43242386 gtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaaagg 43242325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 12503869 - 12503912
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgtt 48  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  12503869 gacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgtt 12503912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43281220 - 43281314
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgag 96  Q
    ||||||||||||||||||||||||  ||| |||||| ||  ||||||| |||||||||| ||||||| || |||||| | |||| |||||||||||    
T  43281220 gtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaacacgag 43281314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 48294979 - 48295085
Alignment:
Q  8 gaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtg 107  Q
    ||||||||||||||||| |||| ||||| |||  ||||||| ||||||||| ||||| || || |||||| | |||  ||||||||||  ||||||| ||    
T  48294979 gaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaaacacgatgaccaaaaatg 48295078  T
Q  108 taattaa 114  Q
    |||||||    
T  48295079 taattaa 48295085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 16318254 - 16318323
Alignment:
Q  50 tgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaaacctt 119  Q
    |||||||||| |||| ||||||||| || | |||| ||||||||||| ||||||||||||||||| ||||    
T  16318254 tgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 16318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 16691505 - 16691613
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    ||||||||||||||||||||  ||| || ||||||  |||||||||| |||||| ||||| || || |||||| | |||| ||||||||  | | |||||    
T  16691505 gacgaaaaatgcaacaaaaataataattaaaggacaattttgttatg-tttaaagaggcaggaccattttcgtgagtaggtcaaaacacagggatcaaaa 16691603  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  16691604 gtgtaattaa 16691613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 20957301 - 20957196
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||  |||| |||||||||  ||||||| ||||||||||  | |||| || |||||| | || | |||||| |||| |||||||    
T  20957301 gacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtgagtaagccaaaactcgaggaccaaaa 20957202  T
Q  105 gtgtaa 110  Q
     |||||    
T  20957201 atgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4909 - 4796
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||| |||    
T  4909 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 4810  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  4809 aaaagtgtaattaa 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 5222 - 5333
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    |||||||||||||||||||||| |||| |||||  |||||||| || |||||||||| | || || ||||||||| | |||| ||||||||||| |||||    
T  5222 aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaa 5321  T
Q  103 aagtgtaattaa 114  Q
    ||||||||||||    
T  5322 aagtgtaattaa 5333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 11445416 - 11445529
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| || ||||||||| | |||| ||||||||||| |||    
T  11445416 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacc 11445515  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  11445516 aaaagtgtaattaa 11445529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15828070 - 15828188
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || |||| ||||||||| | |||| ||||||||||| |||    
T  15828070 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggacc 15828169  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  15828170 aaaagtgtaattaagcctt 15828188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2319788 - 2319675
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||| |||    
T  2319788 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 2319689  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  2319688 aaaaatgtaattaa 2319675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10900359 - 10900472
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||| ||||| |||    
T  10900359 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggacc 10900458  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  10900459 aaaagtgtaattaa 10900472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12935273 - 12935160
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  12935273 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 12935174  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  12935173 aaaagtgtaattaa 12935160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23075557 - 23075670
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||| |||    
T  23075557 gtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 23075656  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  23075657 aaaagtgtaattaa 23075670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18505035 - 18504920
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||| |||||||| |||| |||||| ||||||||||| ||||||||||||||| || ||||||||| | |||| ||||||||||| |||    
T  18505035 gtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacc 18504936  T
Q  101 aaaagtgtaattaaac 116  Q
    ||||||||||||||||    
T  18504935 aaaagtgtaattaaac 18504920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10900055 - 10899941
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||  |||    
T  10900055 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgacc 10899956  T
Q  101 aaaagtgtaattaaa 115  Q
    |||||||||||||||    
T  10899955 aaaagtgtaattaaa 10899941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18505348 - 18505461
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||| |||||||||||| | |||  ||||||||||| |||    
T  18505348 gtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggacc 18505447  T
Q  101 aaaagtgtaattaa 114  Q
    |||||| |||||||    
T  18505448 aaaagtataattaa 18505461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 20741216 - 20741103
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  20741216 gtaggacgaaaaatgcaacaaaaatgatatttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 20741117  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  20741116 aaaagtgtaattaa 20741103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22219782 - 22219895
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  22219782 gtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 22219881  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  22219882 aaaagtgtaattaa 22219895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2322647 - 2322762
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| ||  |||||||| | |||  ||||||||||  |||    
T  2322647 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagacc 2322746  T
Q  101 aaaagtgtaattaaac 116  Q
    ||||||||||||||||    
T  2322747 aaaagtgtaattaaac 2322762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 11277011 - 11277124
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||| |||||||||| |||| || ||||||||| | || | ||||||||||| |||    
T  11277011 gtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggacc 11277110  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  11277111 aaaagtgtaattaa 11277124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12935586 - 12935699
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||| |||||||| |||| |||||||||||||||||| ||||||| ||||||| || ||||||||| | || | ||||||||||| |||    
T  12935586 gtaggacgaaaaatgtaacaaaaatgataattgaaggaccgttttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggacc 12935685  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  12935686 aaaagtgtaattaa 12935699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 18257249 - 18257140
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | || | ||||||||||| |||||||    
T  18257249 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaa 18257150  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  18257149 gtgtaattaa 18257140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20741530 - 20741652
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaa---gatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgaga 97  Q
    |||||||||||||||||| ||||||   |||| |||||||||||||||||| |||||||||| |||| |||||||||||| | |||| |||||||||||     
T  20741530 gtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgagg 20741629  T
Q  98 accaaaagtgtaattaaaccttt 120  Q
    ||||| ||||||||||| |||||    
T  20741630 accaagagtgtaattaagccttt 20741652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 4811692 - 4811798
Alignment:
Q  8 gaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtg 107  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||| | | |||| ||||||||||| | |||||||     
T  4811692 gaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagta 4811791  T
Q  108 taattaa 114  Q
    |||||||    
T  4811792 taattaa 4811798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1149861 - 1149974
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| | || |||||||||||||||||| | |||||||| ||||||| ||||||| | | ||||  |||||||||| |||    
T  1149861 gtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggacc 1149960  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  1149961 aaaagtgtaattaa 1149974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18257566 - 18257679
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||| ||||||||  ||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  18257566 gtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggacc 18257665  T
Q  101 aaaagtgtaattaa 114  Q
    |||||| |||||||    
T  18257666 aaaagtataattaa 18257679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31470745 - 31470858
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||  | ||||||||| | ||||  ||||||| || |||    
T  31470745 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggacc 31470844  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  31470845 aaaagtgtaattaa 31470858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 31470431 - 31470313
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||||||||||  ||| ||||| ||| |||||||| ||||||||||  |||||| ||||||||| | |||| ||||||||||| | |    
T  31470431 gtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatc 31470332  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  31470331 aaaagtgtaattaagcctt 31470313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11445103 - 11444990
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| |||| || |||||||||  |||| || ||| ||||| | |||| ||||||||||| |||    
T  11445103 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggacc 11445004  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  11445003 aaaagtgtaattaa 11444990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28472753 - 28472640
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||||||| |||| || || |||||| | | || ||||||||||| |||    
T  28472753 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggacc 28472654  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  28472653 aaaagtgtaattaa 28472640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29859942 - 29859829
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||||||| |||| || || |||||| | | || ||||||||||| |||    
T  29859942 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggacc 29859843  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  29859842 aaaagtgtaattaa 29859829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15827756 - 15827641
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgt--tttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaa 98  Q
    |||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||| | ||  | ||||||||| | || | ||||||||||| |    
T  15827756 gtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgagga 15827657  T
Q  99 ccaaaagtgtaattaa 114  Q
    ||||||||||||||||    
T  15827656 ccaaaagtgtaattaa 15827641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 23074096 - 23073997
Alignment:
Q  20 aaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaaacctt 119  Q
    ||||| |||| |||||||||||||||||| | |||||||| |||| || ||||||||| | |||| ||||||||||| ||||||||||||||||| ||||    
T  23074096 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 23073997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3835155 - 3835273
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||| ||||||| |||| || ||||||  ||||||| ||||||||| ||||| || || |||||| | |||| ||||||||  | |||    
T  3835155 gtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaacacatggacc 3835254  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||||||||    
T  3835255 aaaagtgtaattaaacctt 3835273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 4811484 - 4811375
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    ||||||||||| |||||||| |||| ||||||||||||||| || | |||||||| ||||||| ||||||||| | |||  ||||| ||  | |||||||    
T  4811484 gacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctattttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaa 4811385  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  4811384 gtgtaattaa 4811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11276706 - 11276585
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||| |||||||| || | |||||||||| ||||||| |||||||||| || | |||||||||| | | |||  ||||||||| | ||     
T  11276706 gtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggact 11276607  T
Q  101 aaaagtgtaattaaacctttta 122  Q
    ||| |||||||||| |||||||    
T  11276606 aaacgtgtaattaagcctttta 11276585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 1149551 - 1149468
Alignment:
Q  31 ttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaa 114  Q
    |||||||||| ||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| | |||||||||||||||    
T  1149551 ttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaa 1149468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 29035069 - 29035179
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| ||||  | ||||||  ||||||| |||||||||| ||||| | || |||||| | ||||  |||||||||| || |||    
T  29035069 ggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaa 29035168  T
Q  104 agtgtaattaa 114  Q
    |||||||||||    
T  29035169 agtgtaattaa 29035179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 18296261 - 18296148
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||| |||||||||| ||||  |||| ||| || | || | ||||||||||| ||     
T  18296261 gtaggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacgaggact 18296162  T
Q  101 aaaagtgtaattaa 114  Q
    |||| | |||||||    
T  18296161 aaaattataattaa 18296148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29033550 - 29033437
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| ||||  ||||||||||| ||||  |||||||| |||||||| |||||||||| |||| || || |||||| |  ||| ||||| ||||| |||    
T  29033550 gtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggacc 29033451  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  29033450 aaaagtgtaattaa 29033437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2864870 - 2864757
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| |||||| | |||| |||||||| || |||    
T  2864870 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggacc 2864771  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  2864770 aaaagtgtaattaa 2864757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18183086 - 18182969
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||  |||    
T  18183086 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgacc 18182987  T
Q  101 aaaagtgtaattaaacct 118  Q
    ||||||||||||||||||    
T  18182986 aaaagtgtaattaaacct 18182969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 5819041 - 5818917
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||||||    
T  5819041 gacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaa 5818942  T
Q  105 gtgtaattaaaccttttaaatttgt 129  Q
    |||||||||||||| ||||||||||    
T  5818941 gtgtaattaaacctattaaatttgt 5818917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 8647871 - 8647980
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| |||||||||||| | |||| ||||||||||| |||||||    
T  8647871 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 8647970  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  8647971 gtgtaattaa 8647980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 14215676 - 14215785
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||| | |||| ||||||||||| |||||||    
T  14215676 gacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaa 14215775  T
Q  105 gtgtaattaa 114  Q
     |||||||||    
T  14215776 ttgtaattaa 14215785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 15372310 - 15372419
Alignment:
Q  9 aaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgt 108  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||||||||||    
T  15372310 aaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgt 15372409  T
Q  109 aattaaacct 118  Q
    ||||||||||    
T  15372410 aattaaacct 15372419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18183398 - 18183511
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  18183398 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 18183497  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  18183498 aaaagtgtaattaa 18183511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2865184 - 2865297
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  2865184 gtaggacgaaaaatgaaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 2865283  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  2865284 aaaagtgtaattaa 2865297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 5819358 - 5819471
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  5819358 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 5819457  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  5819458 aaaagtgtaattaa 5819471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8647554 - 8647441
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  8647554 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggacc 8647455  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  8647454 aaaagtgtaattaa 8647441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19359565 - 19359678
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  19359565 gtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 19359664  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  19359665 aaaagtgtaattaa 19359678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24362265 - 24362378
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| |||| || ||||||||| | |||| ||||| ||||| |||    
T  24362265 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggacc 24362364  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  24362365 aaaagtgtaattaa 24362378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15709087 - 15708974
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||| ||||| | ||||||||| | |||| |||||||| || |||    
T  15709087 gtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggacc 15708988  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  15708987 aaaagtgtaattaa 15708974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 19359252 - 19359139
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| | |||||||| |||| || ||||||||| | |||| ||||||| ||| |||    
T  19359252 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggacc 19359153  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  19359152 aaaagtgtaattaa 19359139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 8461364 - 8461478
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    ||||||||||||| |||||| |||| |||||||||||||||||| ||||||||||  ||| || ||||||||| | |||| ||||||||||| |||||||    
T  8461364 gacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaa 8461463  T
Q  105 gtgtaattaaacctt 119  Q
    |||||||||| ||||    
T  8461464 gtgtaattaagcctt 8461478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 24361953 - 24361843
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| || |||||||||||||||||   |||| ||||||| | | |||    
T  24361953 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggacc 24361854  T
Q  101 aaaagtgtaat 111  Q
    |||||||||||    
T  24361853 aaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 29455171 - 29455289
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| || ||||||||| | |||  ||||||||||| |||    
T  29455171 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggacc 29455270  T
Q  101 aaaagtgtaattaaacctt 119  Q
    ||| |||||||||| ||||    
T  29455271 aaaggtgtaattaagcctt 29455289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16018704 - 16018586
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||| ||||||||| |||||  ||| |||||||||||||||||| | |||||||| |||||||||| |||||| |||||| ||||||||||  |||    
T  16018704 gtaggacggaaaatgcaataaaaat-ataattgaaggaccgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagacc 16018606  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  16018605 aaaagtgtaattaagccttt 16018586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 24331676 - 24331562
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaa--gatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaac 99  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||  ||||||||||| ||    
T  24331676 taggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggac 24331577  T
Q  100 caaaagtgtaattaa 114  Q
    |||||||||||||||    
T  24331576 caaaagtgtaattaa 24331562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 24325328 - 24325218
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||| || |||||||||||||||||   |||| ||||||| | | |||    
T  24325328 gtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggacc 24325229  T
Q  101 aaaagtgtaat 111  Q
    |||||||||||    
T  24325228 aaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 164306 - 164194
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||  |||| ||||| |||||||||||| |||| ||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  164306 gtaggacgaaaaatgcaacaaaat-gataattgaatgaccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggacc 164208  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  164207 aaaagtgtaattaa 164194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14215357 - 14215244
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||  ||||||||| ||||||| |||||||||| || || | ||||||||| | || | ||||||||||| |||    
T  14215357 gtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggacc 14215258  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  14215257 aaaagtgtaattaa 14215244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29454856 - 29454738
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||| |||||| |||| || ||||||||||||||| |||||||||| ||||||| || |||||| | |||| |||||||| |  |||    
T  29454856 gtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgacc 29454757  T
Q  101 aaaagtgtaattaaacctt 119  Q
    ||||||| |||||| ||||    
T  29454756 aaaagtgaaattaagcctt 29454738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4219779 - 4219666
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||  | ||||||   |||||| |||||||||||||||||| || ||| ||||||||  ||||||||||| | |    
T  4219779 gtaggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggatc 4219680  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  4219679 aaaagtgtaattaa 4219666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 8461042 - 8460933
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || ||||||||| | |||| ||||| ||||  |||||||    
T  8461042 gacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaa 8460943  T
Q  105 gtgtaattaa 114  Q
    ||| ||||||    
T  8460942 gtggaattaa 8460933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14463949 - 14464062
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||| ||||| |||| |||||||| ||||||||| | |||||||| | ||  || |||||||| | |||| ||||||||||| ||     
T  14463949 gtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttctattttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggact 14464048  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  14464049 aaaagtgtaattaa 14464062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 25000521 - 25000638
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| |||| ||||| |||| ||||||| ||||||||||   ||||| || |||||| | |||| ||||||| ||  ||||||    
T  25000521 ggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaa 25000620  T
Q  104 agtgtaattaaacctttt 121  Q
    ||||||||||| ||||||    
T  25000621 agtgtaattaagcctttt 25000638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 164620 - 164693
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagttt 74  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||    
T  164620 gtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagttt 164693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4222151 - 4222264
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||| ||||| ||||  |||| |||  ||||||| |||||||||| ||||||| || |||||| |  ||  ||||||||||| |||    
T  4222151 gtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggacc 4222250  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  4222251 aaaagtgtaattaa 4222264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 15371983 - 15371874
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| |||| || ||  ||||| | |||  ||||| ||||| | ||||    
T  15371983 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaa 15371885  T
Q  104 agtgtaattaa 114  Q
    |||||||||||    
T  15371884 agtgtaattaa 15371874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4623264 - 4623151
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||| ||||||| | ||||| |||| |||||||||  ||||||| ||||||||| ||||| || || |||||| | || | ||||||||||  |||    
T  4623264 gtaggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgacc 4623165  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  4623164 aaaagtgtaattaa 4623151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6018429 - 6018317
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||| ||||||||||| |||| |||||| |   ||||||| |||||||||| | ||||| ||||||||| | |||  |||||||||||||||    
T  6018429 gtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaacc 6018331  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  6018330 aaaaatgtaattaa 6018317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7349446 - 7349559
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| ||||| ||||||||||| ||||  |||||||  |||||||| ||||||||||  ||| || || |||||| | |||  ||||||||||| |||    
T  7349446 gtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaacacgaggacc 7349545  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  7349546 aaaagtgtaattaa 7349559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15709398 - 15709510
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||| ||| ||||  | ||||||||||||||| |||||| ||| |||||||  |||||| | | |||| |||||||| |  |||    
T  15709398 gtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt-aaagggcatgactagtttcatgagtaggccaaaacacaatgacc 15709496  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  15709497 aaaagtgtaattaa 15709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16019016 - 16019133
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||| ||||||||| |||| |||||| ||| |||| || | ||||||||  ||| || || |||||| | || | ||||||| ||| |||    
T  16019016 gtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggacc 16019115  T
Q  101 aaaagtgtaattaaacct 118  Q
    ||||||||||||||||||    
T  16019116 aaaagtgtaattaaacct 16019133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24331989 - 24332106
Alignment:
Q  1 gtaggacgaaaaa-tgcaacaaaaaa-gatacttgaaggaccgttttgttatgtttt-aaaaaggcatgatcagtttcgtaaatagggcaaaacacga-g 96  Q
    ||||||||||||| |||||||||||| |||| ||| |||||||||||||| |||||| ||||||||| |||||||||||| | || | ||||||| || |    
T  24331989 gtaggacgaaaaaatgcaacaaaaaatgataattgcaggaccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatg 24332088  T
Q  97 aaccaaaagtgtaattaa 114  Q
    | | ||||||||||||||    
T  24332089 accaaaaagtgtaattaa 24332106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 4624654 - 4624749
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgag 96  Q
    |||||||||||||||||||| ||| |||| ||||| ||  |||||||||||||||||| || ||||| || |||||| | ||||  ||||||||||    
T  4624654 gtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtaggttaaaacacgag 4624749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 37511253 - 37511204
Alignment:
Q  226 atgattatgttcctctttgtattaactcttcattgattaatgaaatgagt 275  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||    
T  37511253 atgattatgttcctctttgtattaactttttattgattaacgaaatgagt 37511204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6019199 - 6019276
Alignment:
Q  1 gtaggacgaaaa-atgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgt 77  Q
    |||||||||||| |||||||||||| |||| || || ||| |||||||| ||||||||||  ||| ||||||||||||    
T  6019199 gtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7348675 - 7348562
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||| ||||||||||| ||||   ||||||  |||||||| |||||||||| |||| || || |||||| | |||   |||||| ||| |||    
T  7348675 gtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaacatgaggacc 7348576  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  7348575 aaaaatgtaattaa 7348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 15079021 - 15079059
Alignment:
Q  117 cttttaaatttgtaatgtaactttgaggtaaagtttatt 155  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  15079021 cttttaaatttgcattgtaactttgaggtaaagtttatt 15079059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22374436 - 22374323
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||| |||    
T  22374436 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 22374337  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  22374336 aaaagtgtaattaa 22374323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 11090637 - 11090513
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| ||  |||||||| | |||| ||||||||||| |||    
T  11090637 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggacc 11090538  T
Q  101 aaaagtgtaattaaaccttttaaat 125  Q
    |||||||||||||||||| ||||||    
T  11090537 aaaagtgtaattaaacctattaaat 11090513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40815461 - 40815348
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  40815461 gtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 40815362  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  40815361 aaaagtgtaattaa 40815348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 40815774 - 40815891
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||| |||||||||| ||||| | ||||||||| | |||| ||||||||||| |||    
T  40815774 gtaggacgaaaaatgcaacaaaaatgataattgaagggccgttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggacc 40815873  T
Q  101 aaaagtgtaattaaacct 118  Q
    ||||||||||||||||||    
T  40815874 aaaagtgtaattaaacct 40815891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 40027569 - 40027688
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  40027569 gtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacc 40027668  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    ||||||||||||||||||||    
T  40027669 aaaagtgtaattaaaccttt 40027688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40027256 - 40027138
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||  |||    
T  40027256 gtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgacc 40027157  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  40027156 aaaagtgtaattaagcctt 40027138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3025582 - 3025465
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  ||| || ||||||||| | |||| ||||||||||| |||    
T  3025582 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacc 3025483  T
Q  101 aaaagtgtaattaaacct 118  Q
    |||| |||||| ||||||    
T  3025482 aaaaatgtaatcaaacct 3025465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22374754 - 22374867
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| |||    
T  22374754 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggacc 22374853  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  22374854 aaaagtgtaattaa 22374867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26538508 - 26538621
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| | |||| || ||||||||| | |||| ||||||||||| |||    
T  26538508 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 26538607  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  26538608 aaaagtgtaattaa 26538621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28616729 - 28616616
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| ||||||||||| |||    
T  28616729 gtaggacgaaaattgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 28616630  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  28616629 aaaagtgtaattaa 28616616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 11090950 - 11091062
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacca 101  Q
    ||||||||||||| |||||| || |||| |||||||||||||||||| |||||||||| ||||||| ||||||||| | |||| ||||||||||| ||||    
T  11090950 taggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 11091049  T
Q  102 aaagtgtaattaa 114  Q
    |||||||||||||    
T  11091050 aaagtgtaattaa 11091062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14432258 - 14432142
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||| |||| || ||||||| | | |||| ||||||||||| |||    
T  14432258 gtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgttttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggacc 14432159  T
Q  101 aaaagtgtaattaaacc 117  Q
    |||||||||||||||||    
T  14432158 aaaagtgtaattaaacc 14432142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 239468 - 239356
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||||| || ||||||||| | |||| ||||||||||  |||    
T  239468 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt-aaaaggcaggaccagtttcgtgagtaggccaaaacacgatgacc 239370  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  239369 aaaagtgtaattaa 239356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7446775 - 7446888
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | || ||||||||||||| | |    
T  7446775 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatc 7446874  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  7446875 aaaaatgtaattaa 7446888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18451260 - 18451373
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| ||||||||||||||||| |||| |||||||||  ||||||| |||||||||| |||| || ||||||||||| |||| ||||||||||| |||    
T  18451260 gtaggaagaaaaatgcaacaaaaatgatatttgaaggactattttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacc 18451359  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  18451360 aaaagtgtaattaa 18451373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20444865 - 20444746
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||||||| |||||||||| |||| || ||||||||| | | || ||||||||||| |||    
T  20444865 gtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggacc 20444766  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    |||||||||||||| |||||    
T  20444765 aaaagtgtaattaagccttt 20444746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 18450946 - 18450828
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||| ||||| |||| |||||||||||||||||| |||||||||| |||  || ||||||||| | |||| ||||||||||| |||    
T  18450946 gtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggacc 18450847  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  18450846 aaaagtgtaattaagcctt 18450828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 26538213 - 26538095
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||| ||||  | ||||||||| | || | ||||||||||| |||    
T  26538213 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggacc 26538114  T
Q  101 aaaagtgtaattaaacctt 119  Q
    |||||||||||||| ||||    
T  26538113 aaaagtgtaattaagcctt 26538095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28847124 - 28847237
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||  ||| || ||||||||| | |||  ||||||||||| |||    
T  28847124 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggacc 28847223  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  28847224 aaaaatgtaattaa 28847237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 43058449 - 43058336
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| || |||||| || | | || ||||||||||| | |    
T  43058449 gtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatc 43058350  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  43058349 aaaagtgtaattaa 43058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 35781093 - 35781205
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacca 101  Q
    ||||||||||||||||||||||| |||| ||||||||  |||||||| |||||||||| ||||||| || |||||| | |||| ||||||||||| | ||    
T  35781093 taggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatca 35781192  T
Q  102 aaagtgtaattaa 114  Q
    |||||||||||||    
T  35781193 aaagtgtaattaa 35781205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 1978222 - 1978111
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | |||| |||||||| || |||||    
T  1978222 aggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaa 1978123  T
Q  103 aagtgtaattaa 114  Q
    || |||||||||    
T  1978122 aaatgtaattaa 1978111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 28617047 - 28617161
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| |||||||||| ||||||| |||||||||| | ||  | ||||||||| | |||| ||||||||||| |||||||    
T  28617047 gacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaa 28617146  T
Q  105 gtgtaattaaacctt 119  Q
    |||||||||| ||||    
T  28617147 gtgtaattaagcctt 28617161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1978538 - 1978651
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||| ||||||||| |||||||| |||||||||| |||| || || |||||| | |||| |||||||| || |||    
T  1978538 gtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggacc 1978637  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  1978638 aaaagtgtaattaa 1978651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 20440461 - 20440573
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacca 101  Q
    ||||||||||| ||||||||||| ||||  |||| |||||||||||| |||||||||| |||| || ||||||||| | | || ||||||||||| ||||    
T  20440461 taggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggacca 20440560  T
Q  102 aaagtgtaattaa 114  Q
    |||||||||||||    
T  20440561 aaagtgtaattaa 20440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8425470 - 8425357
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||| ||| |||| |||||| ||||||||||| ||||||||||||| | || || |||||| | |||| |||||||| || |||    
T  8425470 gtaggacgaaaaatgcaacacaaatgataattgaag-accgttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggacc 8425372  T
Q  101 aaaagtgtaattaaa 115  Q
    |||||||||||||||    
T  8425371 aaaagtgtaattaaa 8425357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 8425793 - 8425903
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| ||||||||| |||||||| | |||||||| |||| || || |||||| | |||  |||||||| ||||||||||    
T  8425793 gacgaaaaatgcaacaaaaatgataattgaaggacagttttgttctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaa 8425892  T
Q  105 gtgtaattaaa 115  Q
    |||||||||||    
T  8425893 gtgtaattaaa 8425903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 15551612 - 15551502
Alignment:
Q  4 ggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaa 103  Q
    ||||||||||||||||||||| ||||  ||||||||  ||||||| |||||||||||||||||| || |||||| | ||   ||||||||||| ||||||    
T  15551612 ggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaa 15551513  T
Q  104 agtgtaattaa 114  Q
    |||||||||||    
T  15551512 agtgtaattaa 15551502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 239785 - 239890
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    ||||||||| |||||||||| |||| |||||||||| ||||||| |||||||||| |||| || || |||||| | |||| ||||||||||| |||||||    
T  239785 gacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaa 239884  T
Q  105 gtgtaa 110  Q
    ||||||    
T  239885 gtgtaa 239890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35779824 - 35779711
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||| |||||||||||||||| |||| |||||||||  ||||||| |||||||||| |||| || || |||||| | || | ||||||||||| |||    
T  35779824 gtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggacc 35779725  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  35779724 aaaagtgtaattaa 35779711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43058762 - 43058874
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||  |||| |||||||||| ||||||| ||||||||||  ||| || ||||||||| | |||| ||||||||||| | |    
T  43058762 gtaggacgaaaaatgcaacaaaat-gataattgaaggaccattttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatc 43058860  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  43058861 aaaagtgtaattaa 43058874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14432570 - 14432683
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| |||||||||||||||||  ||| |||||| ||| |||| || |||||||||| ||||||| ||||||| | | |||| ||||||||||| |||    
T  14432570 gtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggacc 14432669  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  14432670 aaaaatgtaattaa 14432683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 9363209 - 9363293
Alignment:
Q  307 tacatacaaaatcacacattaattataaattttttcaacattttttacaccttaacaacatataggccatttttcaacactttgtta 393  Q
    ||||||||||||||||||   |||||||||| |||||||| |||||||| |||||| ||||||| ||||||| ||||||||||||||    
T  9363209 tacatacaaaatcacacag--attataaattgtttcaacactttttacaacttaacgacatataagccatttctcaacactttgtta 9363293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 7446454 - 7446340
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||| ||||| |||| ||||| |||||||||||| |||||||||| |||| || || |||| | | |||  ||||||||||| | |||||    
T  7446454 gacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaa 7446355  T
Q  105 gtgtaattaaacctt 119  Q
    |||||||||| ||||    
T  7446354 gtgtaattaagcctt 7446340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3025892 - 3026003
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||| |||||||||| ||||  | || |||||| | || | ||||||||||| |||    
T  3025892 gtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggacc 3025990  T
Q  101 aaaagtgtaattaa 114  Q
    |||| |||||||||    
T  3025991 aaaa-tgtaattaa 3026003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8972353 - 8972240
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||| ||||||||||||||||||| |||| ||||| |||  ||||||| |||||| ||| ||||||| || |||||| |  | | ||||||||||| |||    
T  8972353 gtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaacacgaggacc 8972254  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  8972253 aaaagtgtaattaa 8972240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15552483 - 15552595
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||| ||||||||| |||| ||||| |||  ||||||| |||||||||| |||  ||||| |||||| | |||| |||||||  |  |||    
T  15552483 gtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaacattatgacc 15552581  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  15552582 aaaagtgtaattaa 15552595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 20495268 - 20495192
Alignment:
Q  42 ttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaaacct 118  Q
    ||||||||  ||| ||| ||||||||||| |||||| | | || |||||  ||||||||||||||| ||||||||||    
T  20495268 ttttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaaacct 20495192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2096 - 2209
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| || ||||||||||| |||| ||||||||||| |||    
T  2096 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacc 2195  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  2196 aaaagtgtaattaa 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 1783 - 1670
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||| | ||||||| |||||||||| |||| || ||||||||| | |||| ||||||| ||| |||    
T  1783 gtaggacgaaaaatgcaacaaaaatgataattgaaggaacattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggacc 1684  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  1683 aaaagtgtaattaa 1670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 28674 - 28793
Alignment:
Q  3 aggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaa 102  Q
    |||||||||| ||||||||||| |||| ||||| |||||||||||| |||||||||| ||||||| ||||||||||| |||| ||||||||||  |||||    
T  28674 aggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaa 28773  T
Q  103 aagtgtaattaaacctttta 122  Q
    |||||||||||  |||||||    
T  28774 aagtgtaattatgcctttta 28793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 42277 - 42167
Alignment:
Q  9 aaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgt 108  Q
    |||||||||||||||| |||| ||||| |||||||||||| |||||||||| |||| |||||||||||| | |||  |||||||||||||| ||||||||    
T  42277 aaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgt 42178  T
Q  109 aattaaacctt 119  Q
    |||||||||||    
T  42177 aattaaacctt 42167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 42587 - 42700
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||| ||||  ||||||||| | | |||  |||||||||||  ||    
T  42587 gtaggacgaaaaatgaaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggncc 42686  T
Q  101 aaaagtgtaattaa 114  Q
    |||||| |||||||    
T  42687 aaaagtataattaa 42700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 64414 - 64300
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||||| | || |||||||||||| | || | ||||||||||| |||||||    
T  64414 gacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaa 64315  T
Q  105 gtgtaattaaacctt 119  Q
    |||||||||| ||||    
T  64314 gtgtaattaagcctt 64300  T

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Target: scaffold0007; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 64735 - 64853
Alignment:
Q  2 taggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacca 101  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||| |||  || ||||||||| | || | ||||||||||| ||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  102 aaagtgtaattaaaccttt 120  Q
    |||||||||||||||||||    
T  64835 aaagtgtaattaaaccttt 64853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 679 - 570
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaa 104  Q
    |||||||||| ||||||||| |||| ||||||||| |||||||| |||||||||| |||||||||| |||||| | |||| ||||||||||| | |||||    
T  679 gacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaacacgaggatcaaaa 580  T
Q  105 gtgtaattaa 114  Q
    ||||||||||    
T  579 gtgtaattaa 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1170 - 1283
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||| |||| || ||||||||| | || | ||||||||||| ||     
T  1170 gtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggact 1269  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  1270 aaaagtgtaattaa 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 868 - 756
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||| |||||||||| |||| || |||| |||| | |||| ||||||||||  |||    
T  868 gtaggacgaaaaatgcaacaaaat-gataattgaaggaccgttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagacc 770  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  769 aaaagtgtaattaa 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10301 - 10414
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| || |  | ||||||||| | |||  ||||||||||| |||    
T  10301 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggacc 10400  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  10401 aaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 10039 - 9928
Alignment:
Q  10 aaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgta 109  Q
    |||||| |||||||  |||| |||||||||| ||||||| | | |||||| |||| |||||||||||| ||||||  |||||||||| ||||||| ||||    
T  10039 aaaatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgta 9940  T
Q  110 attaaacctttt 121  Q
    |||||| |||||    
T  9939 attaaatctttt 9928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4636 - 4749
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||| |||| || ||||||||| | || | ||||||||||  |||    
T  4636 gtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagacc 4735  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  4736 aaaagtgtaattaa 4749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4319 - 4243
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgt 77  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||| || |||||||||    
T  4319 gtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgt 4243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 134102 - 134215
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| | || |||||||| ||||||||| ||| |||||| |||||||  |||||||| | |||| ||||||||||| |||    
T  134102 gtaggacgaaaaatgcaacaaaaatgttaattgaaggatcgttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggacc 134201  T
Q  101 aaaagtgtaattaa 114  Q
    ||||||||||||||    
T  134202 aaaagtgtaattaa 134215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18951 - 18832
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||| ||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||| || ||||||||| | |||| |||||||  || |||    
T  18951 gtaggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggacc 18852  T
Q  101 aaaagtgtaattaaaccttt 120  Q
    ||||||||||| || |||||    
T  18851 aaaagtgtaatgaagccttt 18832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 19069 - 19163
Alignment:
Q  20 aaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaattaa 114  Q
    ||||| |||| |||||||||||||||||| |||||||||| |||| ||  |||||||| | |||| ||||||||||| |||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 8451 - 8561
Alignment:
Q  14 tgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaaccaaaagtgtaatta 113  Q
    ||||||||||| |||| |||||||||||||||| | |||||||||| || | || ||||||||||| |||  ||||||| ||  ||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  114 aaccttttaaa 124  Q
    |||| ||||||    
T  8551 aaccatttaaa 8561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16925 - 17020
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgag 96  Q
    |||||||||||||||||||||||| |||| |||||||||  ||||||| |||||||||| |||  |||||||||||| | || | |||||||||||    
T  16925 gtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgag 17020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 16608 - 16565
Alignment:
Q  5 gacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgtt 48  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  16608 gacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgtt 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 565 - 454
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    |||||||||||||||||||||||| |||| |||||||||  || |||| ||||||||||   ||||| || |||||| | |||| ||||||||||  |||    
T  565 gtaggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacgaagacc 466  T
Q  101 aaaagtgtaatta 113  Q
    |||| ||||||||    
T  465 aaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7717 - 7775
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaa 59  Q
    |||||||||||||||||||||||| ||||  |||| ||| |||||||| ||||||||||    
T  7717 gtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaa 7775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 61887 - 62002
Alignment:
Q  1 gtaggacgaaaaatgcaacaaaaaagatacttgaaggaccgttttgttatgttttaaaaaggcatgatcagtttcgtaaatagggcaaaacacgagaacc 100  Q
    ||||||||||||||  |||||||| |||| ||||| ||   ||||||| | |||||||| || | || || |||||| | |||  ||||||||||| | |    
T  61887 gtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatc 61986  T
Q  101 aaaagtgtaattaaac 116  Q
    ||||||||||||||||    
T  61987 aaaagtgtaattaaac 62002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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