View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13698_high_15 (Length: 349)
Name: NF13698_high_15
Description: NF13698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13698_high_15 |
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Alignment Details
Target: chr6 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 8 - 332
Target Start/End: Complemental strand, 8345971 - 8345650
Alignment:
| Q |
8 |
aacaaaatcatattcttgcaccccatgattcaatttgttatatgattttcttttgcttattaccactcttttagagattgttttgtttgaatatatttca |
107 |
Q |
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| T |
8345971 |
aacaaaatcatcttcttgcaccccatgattcaatttgttatatgattttcttttgcttattaccactcttttagagattgttttgtttgaatatatttct |
8345872 |
T |
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| Q |
108 |
acaattcatctctatatttataaggtcataaaatatcctatgcatatacttaagacacaaatttctttacattaatatatgttgaaacaatattaaattg |
207 |
Q |
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| T |
8345871 |
acaattcatctctatatttataaggtcataaaatatcctatgcatatacttaagacacaaatttctttacattaatatatgttgaaacaatattaaattg |
8345772 |
T |
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| Q |
208 |
tgacttccttacaaagtgacttgttaattgtaaaatataagagatgtatgttttcttttaattggatcaacaaagtagtttggtcatcatctagatcttt |
307 |
Q |
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| T |
8345771 |
tgacttccttacaaagtgacttgttaattgtaaaatataagagatgtatgttttcttttaattggatcaataaagtagtttggt---catctagatcttt |
8345675 |
T |
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| Q |
308 |
ttcagtgtttggattggcttccaag |
332 |
Q |
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| T |
8345674 |
ttcggtgtttggattggcttccaag |
8345650 |
T |
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