View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13698_low_4 (Length: 488)

Name: NF13698_low_4
Description: NF13698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13698_low_4
NF13698_low_4
[»] chr2 (13 HSPs)
chr2 (17-234)||(10339486-10339704)
chr2 (238-481)||(10339761-10339996)
chr2 (53-234)||(10350467-10350648)
chr2 (53-192)||(10370205-10370341)
chr2 (244-320)||(28898140-28898218)
chr2 (245-320)||(42182889-42182966)
chr2 (82-131)||(10346027-10346076)
chr2 (244-320)||(4964776-4964854)
chr2 (246-320)||(37228499-37228576)
chr2 (245-320)||(45554567-45554644)
chr2 (260-320)||(1107055-1107115)
chr2 (244-320)||(11775861-11775937)
chr2 (376-409)||(10346218-10346251)
[»] chr4 (10 HSPs)
chr4 (67-234)||(26573193-26573363)
chr4 (246-321)||(8108957-8109034)
chr4 (376-417)||(26573426-26573467)
chr4 (247-309)||(40812039-40812103)
chr4 (260-320)||(42862524-42862584)
chr4 (260-310)||(39016779-39016829)
chr4 (260-310)||(51206159-51206209)
chr4 (260-320)||(2187916-2187976)
chr4 (261-317)||(20454558-20454614)
chr4 (260-320)||(47237844-47237904)
[»] chr7 (7 HSPs)
chr7 (244-331)||(26703529-26703619)
chr7 (244-331)||(22786150-22786242)
chr7 (244-309)||(19840881-19840948)
chr7 (244-320)||(33008103-33008181)
chr7 (262-320)||(11824090-11824148)
chr7 (246-320)||(13919781-13919857)
chr7 (244-310)||(13919896-13919964)
[»] chr1 (16 HSPs)
chr1 (244-320)||(11135738-11135816)
chr1 (244-320)||(14094104-14094182)
chr1 (260-320)||(32848686-32848746)
chr1 (245-320)||(19101704-19101781)
chr1 (245-320)||(22540368-22540445)
chr1 (245-320)||(41917995-41918072)
chr1 (260-320)||(11430458-11430518)
chr1 (246-319)||(41095713-41095788)
chr1 (261-320)||(15523228-15523287)
chr1 (261-320)||(15531222-15531281)
chr1 (260-310)||(50773125-50773175)
chr1 (244-298)||(11430568-11430624)
chr1 (259-320)||(28109884-28109945)
chr1 (244-310)||(41095605-41095673)
chr1 (245-298)||(21466696-21466751)
chr1 (260-320)||(44739135-44739195)
[»] chr6 (4 HSPs)
chr6 (260-320)||(35128826-35128886)
chr6 (244-319)||(373398-373475)
chr6 (260-320)||(19090318-19090378)
chr6 (244-298)||(19090211-19090267)
[»] chr5 (6 HSPs)
chr5 (244-320)||(42224694-42224772)
chr5 (260-310)||(4959394-4959444)
chr5 (260-310)||(40971467-40971517)
chr5 (260-320)||(40971556-40971616)
chr5 (245-316)||(30325981-30326054)
chr5 (245-320)||(32050413-32050490)
[»] chr3 (5 HSPs)
chr3 (244-320)||(28529252-28529330)
chr3 (260-320)||(37600233-37600293)
chr3 (260-320)||(54140996-54141056)
chr3 (261-320)||(20791314-20791373)
chr3 (260-320)||(46237149-46237209)
[»] chr8 (5 HSPs)
chr8 (260-320)||(35689497-35689557)
chr8 (273-331)||(43026321-43026382)
chr8 (245-320)||(23685131-23685208)
chr8 (246-320)||(32072098-32072174)
chr8 (271-316)||(45246462-45246507)


Alignment Details
Target: chr2 (Bit Score: 166; Significance: 1e-88; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 17 - 234
Target Start/End: Original strand, 10339486 - 10339704
Alignment:
Q  17 ctttctacctccacattcatcnnnnnnngaataataattcttaaatgatatttttacgagactacctaaatttaactttaaagtttcaacacccgcaagt 116  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10339486 ctttctacctccacattcatctttttttgaataataattcttaaatgatatttttacgagactacctaaatttaactttaaagtttcaacacccgcaagt 10339585  T
Q  117 aagtgctacatcaaatgatactacagccataggtgaaaggacagttattttgc-aaaaaattgaaatgatttacaaaagggaaaccatagaggataaaga 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| | ||| |||||     
T  10339586 aagtgctacatcaaatgatactacagccataggtgaaaggacagttattttgcaaaaaaattgaaatgatttacaaaagagaacccagaaaggctaaagc 10339685  T
Q  216 aaatagaaaatgcataaga 234  Q
    |||||||||||||||||||    
T  10339686 aaatagaaaatgcataaga 10339704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 238 - 481
Target Start/End: Original strand, 10339761 - 10339996
Alignment:
Q  238 agcaggggaatgctagcaacaatcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtc---ccactttatgtgggtacc 334  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  10339761 agcaggggaatgctagcaacaatcttttgaacactctctctagcactcactattttattggggaaaatcaatgaatgtcccaccactttatgtgggtacc 10339860  T
Q  335 agagagagtgctcnnnnnnntgtgtagctagcattctcctcaacgaagcattacccatcatagttgcaattcaattcaaagtattatcacagtactgtca 434  Q
    | |||||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||           |||    
T  10339861 acagagagtgctcaaaaaaatgtgtagctagcattctcctcaacgaagcattactcatcatagttgcaattcaactcaaagtatta-----------tca 10339949  T
Q  435 cagtatcctcgcagttactcatactaatgcttatcacagtataatct 481  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||||    
T  10339950 cagtgtccttgcagttactcatactaatgcttatcacagtattatct 10339996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 53 - 234
Target Start/End: Original strand, 10350467 - 10350648
Alignment:
Q  53 attcttaaatgatatttttacgagactacctaaatttaactttaaagtttcaacacccgcaagtaagtgctacatcaaatgatactacagccataggtga 152  Q
    ||||||||| ||| |||||| ||||| | ||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  10350467 attcttaaaggatctttttatgagaccaactaaatttatctatgaagtttcaacacccgcaagtaagtgctacatcaaatgatactacaaccataggcga 10350566  T
Q  153 aaggacagttattttgcaaaaaattgaaatgatttacaaaagggaaaccatagaggataaagaaaatagaaaatgcataaga 234  Q
    | |||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||| |  || |||||||||||||||||||    
T  10350567 acggacagttcttttgcaaaaaattgaaatgatttacaaaagagaacccagaaaggctgcagcaaatagaaaatgcataaga 10350648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 53 - 192
Target Start/End: Original strand, 10370205 - 10370341
Alignment:
Q  53 attcttaaatgatatttttacgagactacctaaatttaactttaaagtttcaacacccgcaagtaagtgctacatcaaatgatactacagccataggtga 152  Q
    ||||||||| ||| |||||| ||||| | ||||||||||||||||| ||||||||||   |||||||||||||||||||| |||||||| ||||||| ||    
T  10370205 attcttaaaggatctttttatgagaccaactaaatttaactttaaattttcaacacct--aagtaagtgctacatcaaat-atactacaaccataggcga 10370301  T
Q  153 aaggacagttattttgcaaaaaattgaaatgatttacaaa 192  Q
    |||||||||| || ||||||||| ||||||||||||||||    
T  10370302 aaggacagttcttatgcaaaaaactgaaatgatttacaaa 10370341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 28898218 - 28898140
Alignment:
Q  244 ggaatgctagcaacaatctttt--gaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||||| ||||||  || | |||||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  28898218 ggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccac 28898140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 42182889 - 42182966
Alignment:
Q  245 gaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||||||| |||  ||||| | |||||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  42182889 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccac 42182966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 10346027 - 10346076
Alignment:
Q  82 ctaaatttaactttaaagtttcaacacccgcaagtaagtgctacatcaaa 131  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  10346027 ctaaatttaactttaaggtttcaacactcgcaagaaagtgctacatcaaa 10346076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 4964854 - 4964776
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||||| |||  |||||   |||||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  4964854 ggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgtatgtcccac 4964776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 37228499 - 37228576
Alignment:
Q  246 aatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggg-gaaaatcaatgaatgtcccac 320  Q
    ||||||||||||| |||  ||||| | |||||||||||||||||| |||||||||| |||||| |||| |||||||||    
T  37228499 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccac 37228576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 45554567 - 45554644
Alignment:
Q  245 gaatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||||||| ||  |||| ||| |||||||||||||||||| |||||||||   ||||||||| |||||||||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccac 45554644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 1107055 - 1107115
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | ||||||||||||| |||| ||||||||||  ||||||||| |||||||||    
T  1107055 tcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccac 1107115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 11775937 - 11775861
Alignment:
Q  244 ggaatgctagcaacaatcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||||| ||||||  || ||||||||| |||| | | |||||||||  ||||||||||||||| ||||    
T  11775937 ggaatgctagcaacactcttttatacactctctctaacacttattgttttattggataaaatcaatgaatgtgccac 11775861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 409
Target Start/End: Original strand, 10346218 - 10346251
Alignment:
Q  376 aacgaagcattacccatcatagttgcaattcaat 409  Q
    ||||||||||||||||||| ||||||||||||||    
T  10346218 aacgaagcattacccatcacagttgcaattcaat 10346251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 67 - 234
Target Start/End: Original strand, 26573193 - 26573363
Alignment:
Q  67 tttttacgagactacctaaatttaactttaaagtttcaacacccgcaagtaagtgctacatcaaat-gatactacagccataggtgaaaggacagttatt 165  Q
    |||||||||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||    
T  26573193 tttttacgagaccaactaaatataactttgaagtttcaacacccgcaagtaagtgctacatcaaatcgatactacaaccataggcgaaaggacagttctt 26573292  T
Q  166 ttgc--aaaaaattgaaatgatttacaaaagggaaaccatagaggataaagaaaatagaaaatgcataaga 234  Q
    ||||  |||||| |||||||||||||||||| |||  || | ||| ||||| | |||||||||||||||||    
T  26573293 ttgcaaaaaaaaatgaaatgatttacaaaagagaacacagaaaggctaaagcagatagaaaatgcataaga 26573363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 8108957 - 8109034
Alignment:
Q  246 aatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccact 321  Q
    ||||||||||||| ||  |||| ||| |||||||||||||||||| ||||||||||  ||||||||| ||||||||||    
T  8108957 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccact 8109034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 26573426 - 26573467
Alignment:
Q  376 aacgaagcattacccatcatagttgcaattcaattcaaagta 417  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  26573426 aacgaagcattacccatcacagttgcaattcaactcaaagta 26573467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 40812039 - 40812103
Alignment:
Q  247 atgctagcaacaatctttt--gaaccctctctctagcactcactattttattggggaaaatcaat 309  Q
    |||||||||||| ||||||  |||| |||||||||||||||||| ||||||||||  ||||||||    
T  40812039 atgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaat 40812103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 42862584 - 42862524
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | || ||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  42862584 tcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccac 42862524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 39016829 - 39016779
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatg 310  Q
    |||||||||| |||||||||||||| ||| ||||||| || ||||||||||    
T  39016829 tcttttgaacactctctctagcacttactcttttattaggtaaaatcaatg 39016779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 51206209 - 51206159
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatg 310  Q
    |||||||| | |||||||||||||||||| ||||||||||  |||||||||    
T  51206209 tcttttgagcactctctctagcactcactcttttattgggtgaaatcaatg 51206159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 2187976 - 2187916
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | |||||||||||  || || ||||||||||  |||||||||||||||||||    
T  2187976 tcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccac 2187916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 20454558 - 20454614
Alignment:
Q  261 cttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcc 317  Q
    ||||| ||| |||||||||||||||||| ||||||| |  |||||||||| ||||||    
T  20454558 cttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtcc 20454614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 47237904 - 47237844
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||| |||||||||||| ||||| |||||||||   ||||||||  |||||||||    
T  47237904 tcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccac 47237844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 331
Target Start/End: Complemental strand, 26703619 - 26703529
Alignment:
Q  244 ggaatgctagcaacaatcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtc---ccactttatgtgggt 331  Q
    ||||||||||||||| |||||||| |  ||||||||||||||||| ||||||||||  ||||||||| |||||   |||||||||||||||    
T  26703619 ggaatgctagcaacactcttttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggt 26703529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 22786150 - 22786242
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtc---ccactttatgtgggt 331  Q
    ||||||||||||||| |||  ||||| | |||||||||||||||||| ||||||| ||  ||||||||| |||||   |||||||||||||||    
T  22786150 ggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggt 22786242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 19840881 - 19840948
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaat 309  Q
    ||||||||||||||| |||  ||||| | |||||||||||||||||| ||||||||||  ||||||||    
T  19840881 ggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 33008103 - 33008181
Alignment:
Q  244 ggaatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||||| ||  |||||||| || ||||||||||||||| |||||||||   |||||| || |||||||||    
T  33008103 ggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccac 33008181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 11824090 - 11824148
Alignment:
Q  262 ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||| ||| |||||||||||||||||| |||||||||   ||||||||| |||||||||    
T  11824090 ttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccac 11824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 13919781 - 13919857
Alignment:
Q  246 aatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||| |||  ||||| | ||||||||||||||| ||  |||||||||  ||||||||| |||||||||    
T  13919781 aatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccac 13919857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 13919964 - 13919896
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatg 310  Q
    ||||||||||||||| |||  ||||| | ||||||||||||||||||  |||||||||  |||||||||    
T  13919964 ggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatg 13919896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 11135738 - 11135816
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||||| |||  ||||| | |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  11135738 ggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccac 11135816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 14094182 - 14094104
Alignment:
Q  244 ggaatgctagcaaca--atcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||| |||  ||||||||||| ||||||| |||||||||| ||||||||||  ||||||||| |||||||||    
T  14094182 ggaatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccac 14094104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 32848746 - 32848686
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||| |||||||||||||||||| ||||||||||  |||||| || |||||||||    
T  32848746 tcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccac 32848686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 19101781 - 19101704
Alignment:
Q  245 gaatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||||||| ||  ||||| || |||||| |||||||||||||||||||||   ||||||||| |||||||||    
T  19101781 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccac 19101704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 22540368 - 22540445
Alignment:
Q  245 gaatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||||||| ||  ||||| || |||||| |||||||||||||||||||||   ||||||||| |||||||||    
T  22540368 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccac 22540445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 41917995 - 41918072
Alignment:
Q  245 gaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||||||| |||  ||||| | | |||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  41917995 gaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccac 41918072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 11430458 - 11430518
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | |||| ||||||||||||| ||||||||||  ||||||||| |||||||||    
T  11430458 tcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccac 11430518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 319
Target Start/End: Complemental strand, 41095788 - 41095713
Alignment:
Q  246 aatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtccca 319  Q
    ||||||||||||| |||  ||||| | ||||||||||||||||||  |||||||||  ||||||||| ||||||||    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtccca 41095713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 15523228 - 15523287
Alignment:
Q  261 cttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||| || |||||| |||||||||||||||||||||   ||||||||| |||||||||    
T  15523228 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccac 15523287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 15531222 - 15531281
Alignment:
Q  261 cttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||| || |||||| |||||||||||||||||||||   ||||||||| |||||||||    
T  15531222 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccac 15531281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 50773125 - 50773175
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatg 310  Q
    |||||||||| |||||||||||||||| | |||||||||| ||||| ||||    
T  50773125 tcttttgaacactctctctagcactcattcttttattgggtaaaattaatg 50773175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 11430624 - 11430568
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattgg 298  Q
    ||||||||||||||| |||  ||||| | |||||||||||||||||| |||||||||    
T  11430624 ggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgg 11430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 28109884 - 28109945
Alignment:
Q  259 atcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||| | || ||||||||||||||| ||||||||||  ||||||||| |||| ||||    
T  28109884 atcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgcatgttccac 28109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 41095605 - 41095673
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatg 310  Q
    ||||||||||||||| |||  ||||| | ||||||||||||||||||  |||||||||  |||||||||    
T  41095605 ggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatg 41095673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 21466751 - 21466696
Alignment:
Q  245 gaatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattgg 298  Q
    |||||||||||||| ||  ||||| || |||||| |||||||||||||||||||||    
T  21466751 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattgg 21466696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 44739135 - 44739195
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||| |||||||||||||||||| |||| ||| |  |||| |||| |||||||||    
T  44739135 tcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccac 44739195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 35128886 - 35128826
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||| |||||||||||| ||||| |||||||||| |||||||||| |||||||||    
T  35128886 tcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccac 35128826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 373398 - 373475
Alignment:
Q  244 ggaatgctagcaacaatctttt--gaaccctctctctagcactcactattttattggggaaaatcaatgaatgtccca 319  Q
    ||||||||| ||||| ||||||  || | ||||||||||||| |||| |||||||||| |||||||||| ||||||||    
T  373398 ggaatgctaacaacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaatgtatgtccca 373475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 19090378 - 19090318
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | ||||||||||||| |||| ||||||||||  ||||||||| |||||||||    
T  19090378 tcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccac 19090318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 298
Target Start/End: Original strand, 19090211 - 19090267
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattgg 298  Q
    ||||||||||||||| |||  ||||| | |||||||||||||||||| |||||||||    
T  19090211 ggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgg 19090267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000005; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 42224772 - 42224694
Alignment:
Q  244 ggaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||||| |||  ||||| | |||||||||||||||||| ||||||| ||  ||||||||| |||||||||    
T  42224772 ggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccac 42224694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 4959444 - 4959394
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatg 310  Q
    |||||||| | |||||||||||||||||| ||||||||||| |||||||||    
T  4959444 tcttttgagcactctctctagcactcactcttttattgggggaaatcaatg 4959394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 40971467 - 40971517
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatg 310  Q
    |||||||||| |||| |||| ||||||||||||||||||| ||||||||||    
T  40971467 tcttttgaacactctatctaacactcactattttattgggtaaaatcaatg 40971517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 40971616 - 40971556
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | |||||||||||||||||| |||||||| |  ||||||||| |||||||||    
T  40971616 tcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccac 40971556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 30326054 - 30325981
Alignment:
Q  245 gaatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtc 316  Q
    |||||||||||||| ||  ||||| || |||||| |||||||||||||||||||||   ||||||||| |||||    
T  30326054 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtc 30325981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 32050490 - 32050413
Alignment:
Q  245 gaatgctagcaacaatct--tttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||||||| |||  ||||| |  ||||||||||||||||| ||||||||||  ||||||||| |||| ||||    
T  32050490 gaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgttccac 32050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000005; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 28529252 - 28529330
Alignment:
Q  244 ggaatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||||| ||  |||| ||| |||||||||||||||||| |||||||||   ||||||||| |||||||||    
T  28529252 ggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccac 28529330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 37600293 - 37600233
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | ||||||||||||| |||| ||||||||||  ||||||||| |||||||||    
T  37600293 tcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccac 37600233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 54141056 - 54140996
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | ||||||||||||||||||  |||||||||  ||||||||| |||||||||    
T  54141056 tcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccac 54140996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 20791314 - 20791373
Alignment:
Q  261 cttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||| || |||||| |||||||||||||||||||||   ||||||||| |||||||||    
T  20791314 cttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccac 20791373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 46237209 - 46237149
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | |||||||||||| ||||| |||||||||   ||||||||| |||||||||    
T  46237209 tcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccac 46237149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 35689497 - 35689557
Alignment:
Q  260 tcttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||| | |||||||||||||||||| |||||||||   ||||||||| |||||||||    
T  35689497 tcttttgagcactctctctagcactcacttttttattggatgaaatcaatgtatgtcccac 35689557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 43026321 - 43026382
Alignment:
Q  273 ctctctagcactcactattttattggggaaaatcaatgaatgtc---ccactttatgtgggt 331  Q
    |||||||||||||||| ||||||| || |||||||||| |||||   |||||||||||||||    
T  43026321 ctctctagcactcacttttttattaggtaaaatcaatgtatgtcctgccactttatgtgggt 43026382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 320
Target Start/End: Original strand, 23685131 - 23685208
Alignment:
Q  245 gaatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    |||||||||||||| ||  ||||| || ||||||  ||||||||||||||||||||   ||||||||| |||||||||    
T  23685131 gaatgctagcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccac 23685208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 32072098 - 32072174
Alignment:
Q  246 aatgctagcaacaatc--ttttgaaccctctctctagcactcactattttattggggaaaatcaatgaatgtcccac 320  Q
    ||||||||||||| ||  |||| ||| |||||||||||||||||| |||||||||   |||| |||| |||||||||    
T  32072098 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccac 32072174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 45246462 - 45246507
Alignment:
Q  271 ctctctctagcactcactattttattggggaaaatcaatgaatgtc 316  Q
    |||||| |||||||||||||||||||||  |||||||||| |||||    
T  45246462 ctctctttagcactcactattttattggataaaatcaatgtatgtc 45246507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University