View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1369_high_72 (Length: 230)
Name: NF1369_high_72
Description: NF1369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1369_high_72 |
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Alignment Details
Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 29280317 - 29280444
Alignment:
| Q |
1 |
tatgatgaagtcaccatttcatcagaaaactctttggaaatcacagtgagcaatgtaattcctgcatgtcgcattttccagtcagctgaatccaagtaat |
100 |
Q |
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| T |
29280317 |
tatgatgaagtcaccatttcatcagaaaactctttggaaatcacagtgagcaatgtaattcctgcatgtcgcattttccagtcagctgaatccaagtaat |
29280416 |
T |
|
| Q |
101 |
atttagtcaacagttcatgagcaacagc |
128 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
29280417 |
atttagtcaacagttcatgagcaacagc |
29280444 |
T |
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