View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1369_low_51 (Length: 336)
Name: NF1369_low_51
Description: NF1369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1369_low_51 |
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Alignment Details
Target: chr3 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 30 - 326
Target Start/End: Original strand, 43741085 - 43741381
Alignment:
| Q |
30 |
attcatttcgctcaagattccgatcagaacagaatgtttctcgcaaaattagacggttttattccgttaatggttagttttcttgataatgttgagaatg |
129 |
Q |
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| T |
43741085 |
attcatttcgctcaagattccgatcagaacagaacgtttctcgcgaaattagacggttttattccgttaatggttagttttcttgataatgttgagaatg |
43741184 |
T |
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| Q |
130 |
ttgacaaaagcattgaatttcttgaacagactttaacggtgttaggtttgattctggaaaaaattaaagttcgtgaaggattgaagaaccttgtgttaaa |
229 |
Q |
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| T |
43741185 |
ttgacaaaagcattgaatttcttgaacagactttaacggtgttaggtttgattctggaaaaaattaaagttcgtgaaggattgaagaaccttgtgttaaa |
43741284 |
T |
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| Q |
230 |
aggaaagaacaaaaaatgcttggattcaatggttctcgttttacaaaaaggaagcaacaattcaagaatcgtaaccgccagggttttgaaattcatc |
326 |
Q |
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| T |
43741285 |
aggaaagaacaaaaaatgcttggattcaatggttctcgttttacaaaaaggaagcaacaattcaagaatcgcaaccgccagggttttgaaattcatc |
43741381 |
T |
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