View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1369_low_54 (Length: 322)

Name: NF1369_low_54
Description: NF1369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1369_low_54
NF1369_low_54
[»] chr8 (25 HSPs)
chr8 (80-293)||(21538696-21538909)
chr8 (219-291)||(20038976-20039048)
chr8 (209-293)||(20712580-20712664)
chr8 (219-292)||(16418615-16418688)
chr8 (219-292)||(21939991-21940064)
chr8 (219-291)||(17620894-17620966)
chr8 (219-287)||(21098789-21098857)
chr8 (219-287)||(21104110-21104178)
chr8 (220-287)||(21843520-21843587)
chr8 (209-287)||(24034167-24034245)
chr8 (217-288)||(8314619-8314690)
chr8 (209-287)||(19767677-19767755)
chr8 (215-291)||(14352163-14352237)
chr8 (219-287)||(11346948-11347016)
chr8 (219-287)||(21382246-21382314)
chr8 (219-287)||(22370095-22370163)
chr8 (212-291)||(23455086-23455166)
chr8 (219-287)||(23911592-23911660)
chr8 (219-288)||(8322841-8322910)
chr8 (219-275)||(20002279-20002335)
chr8 (219-287)||(22033550-22033618)
chr8 (219-287)||(22099650-22099718)
chr8 (219-287)||(22102545-22102613)
chr8 (219-268)||(21831188-21831237)
chr8 (212-268)||(22817762-22817818)
[»] chr4 (21 HSPs)
chr4 (209-293)||(17484895-17484979)
chr4 (219-292)||(56580534-56580607)
chr4 (219-289)||(18081454-18081524)
chr4 (211-293)||(45234219-45234301)
chr4 (220-287)||(10630902-10630969)
chr4 (219-287)||(11496609-11496677)
chr4 (219-287)||(13823065-13823133)
chr4 (219-287)||(42709726-42709794)
chr4 (219-293)||(18292084-18292158)
chr4 (221-293)||(3354786-3354858)
chr4 (212-280)||(15865647-15865715)
chr4 (209-277)||(38426885-38426953)
chr4 (212-275)||(15409534-15409597)
chr4 (210-280)||(14653984-14654054)
chr4 (219-287)||(10650540-10650608)
chr4 (219-275)||(15254512-15254568)
chr4 (219-287)||(15260104-15260172)
chr4 (219-287)||(16682906-16682974)
chr4 (213-280)||(9488867-9488934)
chr4 (209-280)||(8092412-8092483)
chr4 (219-273)||(17296244-17296298)
[»] chr7 (36 HSPs)
chr7 (209-291)||(538740-538822)
chr7 (212-291)||(4312705-4312784)
chr7 (213-291)||(4461231-4461309)
chr7 (209-293)||(20108515-20108599)
chr7 (212-291)||(8780924-8781003)
chr7 (219-290)||(11921302-11921373)
chr7 (209-292)||(12548790-12548873)
chr7 (209-287)||(23515219-23515297)
chr7 (219-292)||(16532243-16532316)
chr7 (219-292)||(16633346-16633419)
chr7 (219-287)||(9583045-9583113)
chr7 (219-291)||(13658014-13658086)
chr7 (219-287)||(14551251-14551319)
chr7 (219-290)||(16465611-16465682)
chr7 (219-288)||(18593347-18593416)
chr7 (219-288)||(18618268-18618337)
chr7 (219-287)||(825776-825844)
chr7 (219-287)||(8718017-8718085)
chr7 (209-293)||(9004098-9004182)
chr7 (214-290)||(9264929-9265005)
chr7 (209-285)||(12567168-12567244)
chr7 (219-287)||(14221713-14221781)
chr7 (219-287)||(18287754-18287822)
chr7 (219-287)||(27291489-27291557)
chr7 (219-282)||(15916771-15916834)
chr7 (219-288)||(13674007-13674076)
chr7 (219-287)||(15065921-15065989)
chr7 (219-287)||(16119844-16119912)
chr7 (214-277)||(9194534-9194597)
chr7 (209-287)||(4791367-4791445)
chr7 (210-280)||(5397275-5397345)
chr7 (210-280)||(15206570-15206640)
chr7 (219-287)||(48801771-48801839)
chr7 (211-280)||(15348532-15348601)
chr7 (213-280)||(6713057-6713124)
chr7 (219-280)||(15522517-15522578)
[»] chr2 (27 HSPs)
chr2 (209-293)||(5500250-5500334)
chr2 (209-293)||(25144742-25144826)
chr2 (219-292)||(23644092-23644165)
chr2 (212-293)||(23798910-23798991)
chr2 (209-280)||(25804252-25804323)
chr2 (219-287)||(22665214-22665282)
chr2 (212-275)||(24171510-24171573)
chr2 (212-291)||(24178181-24178260)
chr2 (217-288)||(27627732-27627803)
chr2 (217-287)||(17590559-17590629)
chr2 (219-288)||(16775802-16775871)
chr2 (219-288)||(22044655-22044724)
chr2 (219-288)||(25357662-25357731)
chr2 (219-287)||(23159380-23159448)
chr2 (219-287)||(23570637-23570705)
chr2 (219-287)||(27631648-27631716)
chr2 (219-287)||(27768811-27768879)
chr2 (212-291)||(24506798-24506877)
chr2 (219-278)||(24795280-24795339)
chr2 (212-291)||(25337639-25337718)
chr2 (209-280)||(25370870-25370941)
chr2 (212-280)||(24321328-24321396)
chr2 (219-278)||(11610-11669)
chr2 (219-278)||(117704-117763)
chr2 (219-280)||(23257565-23257625)
chr2 (213-280)||(24019056-24019123)
chr2 (215-268)||(29955870-29955923)
[»] scaffold0582 (1 HSPs)
scaffold0582 (219-293)||(8800-8874)
[»] chr3 (47 HSPs)
chr3 (219-293)||(10546931-10547005)
chr3 (219-293)||(13001420-13001494)
chr3 (212-291)||(3245576-3245655)
chr3 (219-289)||(4382896-4382966)
chr3 (212-290)||(14348576-14348654)
chr3 (209-291)||(20156500-20156581)
chr3 (209-293)||(17387976-17388060)
chr3 (209-293)||(22637839-22637923)
chr3 (209-291)||(13097852-13097934)
chr3 (219-292)||(12160202-12160275)
chr3 (219-287)||(9360966-9361034)
chr3 (219-287)||(10602467-10602535)
chr3 (219-287)||(13504876-13504944)
chr3 (219-287)||(16448755-16448823)
chr3 (212-291)||(2721445-2721523)
chr3 (212-291)||(11398357-11398436)
chr3 (217-288)||(16373558-16373629)
chr3 (212-291)||(20225742-20225821)
chr3 (214-280)||(13601221-13601287)
chr3 (219-288)||(7600506-7600575)
chr3 (219-288)||(10160168-10160237)
chr3 (219-288)||(12187071-12187140)
chr3 (210-291)||(13690749-13690830)
chr3 (219-288)||(15556937-15557006)
chr3 (219-288)||(15645152-15645221)
chr3 (219-288)||(37942529-37942598)
chr3 (212-280)||(3279343-3279411)
chr3 (219-287)||(3339221-3339289)
chr3 (219-287)||(11947559-11947627)
chr3 (219-287)||(12776529-12776597)
chr3 (208-280)||(27356712-27356784)
chr3 (219-281)||(20584261-20584323)
chr3 (219-288)||(10147162-10147231)
chr3 (219-288)||(13187412-13187481)
chr3 (215-280)||(14445759-14445824)
chr3 (221-281)||(13136207-13136267)
chr3 (219-287)||(15619278-15619346)
chr3 (219-275)||(15946773-15946829)
chr3 (212-291)||(1992944-1993023)
chr3 (219-288)||(6815019-6815088)
chr3 (219-288)||(12193485-12193554)
chr3 (212-268)||(13068313-13068369)
chr3 (219-287)||(13195453-13195521)
chr3 (232-291)||(17045843-17045902)
chr3 (232-291)||(17048003-17048062)
chr3 (219-279)||(8686382-8686442)
chr3 (212-255)||(2005499-2005542)
[»] scaffold0011 (3 HSPs)
scaffold0011 (209-293)||(164388-164472)
scaffold0011 (212-291)||(172250-172329)
scaffold0011 (210-280)||(162002-162072)
[»] chr6 (27 HSPs)
chr6 (217-293)||(2181200-2181276)
chr6 (212-290)||(25963391-25963469)
chr6 (212-290)||(25968038-25968116)
chr6 (212-290)||(30671795-30671873)
chr6 (209-293)||(18448280-18448364)
chr6 (209-291)||(21560539-21560621)
chr6 (209-291)||(29595837-29595919)
chr6 (209-290)||(23023236-23023317)
chr6 (219-287)||(15699707-15699775)
chr6 (223-291)||(18184873-18184941)
chr6 (219-287)||(22165544-22165612)
chr6 (219-287)||(22243964-22244032)
chr6 (209-291)||(18854159-18854241)
chr6 (217-287)||(22061496-22061566)
chr6 (209-287)||(25631254-25631332)
chr6 (219-288)||(20170394-20170463)
chr6 (219-288)||(24855240-24855309)
chr6 (219-287)||(11203997-11204065)
chr6 (208-280)||(18731875-18731947)
chr6 (212-292)||(20218969-20219049)
chr6 (212-292)||(22112994-22113074)
chr6 (228-291)||(20107784-20107847)
chr6 (209-291)||(25625832-25625914)
chr6 (210-280)||(35270972-35271042)
chr6 (223-280)||(22767115-22767172)
chr6 (212-280)||(29686601-29686669)
chr6 (212-280)||(23517819-23517887)
[»] scaffold0004 (1 HSPs)
scaffold0004 (210-293)||(251856-251939)
[»] scaffold0974 (1 HSPs)
scaffold0974 (222-292)||(1250-1320)
[»] scaffold0506 (1 HSPs)
scaffold0506 (211-293)||(2274-2356)
[»] scaffold0156 (1 HSPs)
scaffold0156 (221-291)||(974-1044)
[»] scaffold0113 (1 HSPs)
scaffold0113 (209-291)||(361-443)
[»] scaffold0026 (1 HSPs)
scaffold0026 (209-291)||(11197-11279)
[»] scaffold0020 (1 HSPs)
scaffold0020 (210-292)||(121094-121176)
[»] scaffold0162 (1 HSPs)
scaffold0162 (210-291)||(35090-35171)
[»] scaffold0034 (1 HSPs)
scaffold0034 (219-292)||(58623-58696)
[»] scaffold0032 (2 HSPs)
scaffold0032 (219-292)||(97721-97794)
scaffold0032 (229-269)||(25658-25697)
[»] chr1 (14 HSPs)
chr1 (221-293)||(52938618-52938690)
chr1 (219-293)||(3990085-3990159)
chr1 (219-288)||(17094596-17094665)
chr1 (212-280)||(19875632-19875700)
chr1 (217-288)||(21798655-21798726)
chr1 (219-286)||(27047027-27047094)
chr1 (209-287)||(8653268-8653346)
chr1 (219-288)||(14070656-14070725)
chr1 (212-293)||(19364175-19364256)
chr1 (212-280)||(21784460-21784528)
chr1 (209-280)||(4027839-4027910)
chr1 (219-277)||(20237618-20237676)
chr1 (208-264)||(8947499-8947555)
chr1 (212-280)||(16382564-16382631)
[»] scaffold0096 (1 HSPs)
scaffold0096 (209-292)||(38493-38576)
[»] chr5 (26 HSPs)
chr5 (210-293)||(24219892-24219975)
chr5 (209-287)||(23600621-23600699)
chr5 (219-287)||(15735686-15735754)
chr5 (219-287)||(20595826-20595894)
chr5 (219-287)||(20602112-20602180)
chr5 (219-287)||(20608403-20608471)
chr5 (219-288)||(18073051-18073120)
chr5 (219-288)||(20790709-20790778)
chr5 (219-288)||(23748202-23748271)
chr5 (219-288)||(24940685-24940754)
chr5 (219-287)||(22317508-22317576)
chr5 (219-287)||(25006803-25006871)
chr5 (219-287)||(30759650-30759718)
chr5 (209-292)||(20444824-20444907)
chr5 (219-288)||(24953169-24953238)
chr5 (212-280)||(21387549-21387617)
chr5 (219-287)||(25116166-25116234)
chr5 (219-287)||(26847796-26847864)
chr5 (219-280)||(18484207-18484268)
chr5 (219-268)||(25175256-25175305)
chr5 (219-287)||(22855716-22855784)
chr5 (212-280)||(20916444-20916512)
chr5 (245-288)||(20622313-20622356)
chr5 (225-268)||(27270564-27270607)
chr5 (211-273)||(17412736-17412798)
chr5 (249-287)||(23710701-23710739)
[»] scaffold0679 (1 HSPs)
scaffold0679 (217-291)||(8082-8156)
[»] scaffold0420 (1 HSPs)
scaffold0420 (209-287)||(10191-10269)
[»] scaffold0315 (1 HSPs)
scaffold0315 (209-291)||(14647-14729)
[»] scaffold0328 (1 HSPs)
scaffold0328 (212-293)||(498-579)
[»] scaffold0861 (1 HSPs)
scaffold0861 (212-280)||(914-982)
[»] scaffold0825 (1 HSPs)
scaffold0825 (209-293)||(2837-2921)
[»] scaffold0230 (1 HSPs)
scaffold0230 (219-287)||(15830-15898)
[»] scaffold0029 (1 HSPs)
scaffold0029 (219-287)||(123521-123589)
[»] scaffold0512 (1 HSPs)
scaffold0512 (213-280)||(5239-5306)
[»] scaffold0375 (1 HSPs)
scaffold0375 (212-275)||(12743-12806)
[»] scaffold0566 (1 HSPs)
scaffold0566 (209-287)||(2755-2833)
[»] scaffold0278 (1 HSPs)
scaffold0278 (212-290)||(12990-13068)
[»] scaffold0059 (1 HSPs)
scaffold0059 (209-287)||(12548-12626)
[»] scaffold0013 (1 HSPs)
scaffold0013 (209-287)||(232772-232850)
[»] scaffold0384 (1 HSPs)
scaffold0384 (219-287)||(10713-10781)
[»] scaffold0258 (1 HSPs)
scaffold0258 (212-280)||(22143-22211)
[»] scaffold0031 (1 HSPs)
scaffold0031 (212-268)||(22774-22830)
[»] scaffold1225 (1 HSPs)
scaffold1225 (212-291)||(1835-1914)
[»] scaffold0773 (1 HSPs)
scaffold0773 (212-291)||(620-699)
[»] scaffold0056 (1 HSPs)
scaffold0056 (209-280)||(42244-42315)
[»] scaffold0404 (2 HSPs)
scaffold0404 (219-288)||(3460-3529)
scaffold0404 (219-288)||(1189-1258)
[»] scaffold0035 (1 HSPs)
scaffold0035 (219-280)||(50501-50562)
[»] scaffold0215 (1 HSPs)
scaffold0215 (219-287)||(610-678)
[»] scaffold0117 (1 HSPs)
scaffold0117 (208-268)||(45212-45272)
[»] scaffold0116 (1 HSPs)
scaffold0116 (212-268)||(37731-37787)
[»] scaffold0089 (1 HSPs)
scaffold0089 (219-287)||(54844-54912)
[»] scaffold0088 (1 HSPs)
scaffold0088 (212-280)||(37870-37938)
[»] scaffold0094 (1 HSPs)
scaffold0094 (213-280)||(1193-1260)
[»] scaffold0123 (1 HSPs)
scaffold0123 (221-264)||(18223-18266)
[»] scaffold0037 (2 HSPs)
scaffold0037 (211-274)||(72560-72622)
scaffold0037 (211-274)||(84750-84812)
[»] scaffold0001 (1 HSPs)
scaffold0001 (219-280)||(83153-83214)
[»] scaffold0402 (1 HSPs)
scaffold0402 (229-269)||(9138-9177)


Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 80 - 293
Target Start/End: Complemental strand, 21538909 - 21538696
Alignment:
Q  80 cacagagaaaacctgacacaaagccgcccaaaaactgcctgaaacgagtcaacatcaagttttgatgttgtcagctcgccatggcgagttggtggcgagc 179  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21538909 cacagagaaaacctgacacgaagccgcccaaaaactgcttgaaacgagccaacatcaagttttgatgctgtcagctcgccatggcgagttggtggcgagc 21538810  T
Q  180 agaccatgtgttctatggtctagctcgccagataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaaca 279  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  21538809 agaccatgtgttctgtggtctagctcgccagataattattgactcatcaaaatcccccacacttaaatttttgcttgtcctcaagcaaaaggcataaaca 21538710  T
Q  280 tggtagcataaaac 293  Q
    ||||||||||||||    
T  21538709 tggtagcataaaac 21538696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 20038976 - 20039048
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  20038976 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 20039048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 20712664 - 20712580
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  20712664 agataataactgactcatcaaactcccctacacttaaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaac 20712580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 16418615 - 16418688
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  16418615 tgactcatcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacatggtagcataaaa 16418688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 21939991 - 21940064
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  21939991 tgactcatcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacatggtagcataaaa 21940064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 17620966 - 17620894
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  17620966 tgactcatcaaactcccccacacttgaatttttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 17620894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 21098789 - 21098857
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  21098789 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 21098857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 21104110 - 21104178
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  21104110 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 21104178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 21843520 - 21843587
Alignment:
Q  220 gactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  21843520 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 21843587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 24034245 - 24034167
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||||    
T  24034245 agataattaatgactcatcaaactcccccacacttgaatctttgcttgtccacaagcaaaaggcataaacatagtagca 24034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 8314690 - 8314619
Alignment:
Q  217 attgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  8314690 attgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 8314619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 19767755 - 19767677
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  19767755 agataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 19767677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 14352163 - 14352237
Alignment:
Q  215 ttattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||||| | ||||||||||||||||||||    
T  14352163 ttattgactcatcaaactccc--acacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaa 14352237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 11346948 - 11347016
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  11346948 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 11347016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 21382314 - 21382246
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  21382314 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 21382246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 22370163 - 22370095
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  22370163 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 22370095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 23455166 - 23455086
Alignment:
Q  212 taattattgactcatcaaactccccc-acacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  23455166 taattaatgactcatcaaactccccccacacttgaatctttgcttgtcctcgagcaaaaggcataaacatagtagcataaa 23455086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 23911660 - 23911592
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  23911660 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 23911592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 8322841 - 8322910
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  8322841 tgactcatcaaactccctcatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 8322910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 20002335 - 20002279
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcata 275  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  20002335 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 20002279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 22033550 - 22033618
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||| ||||    
T  22033550 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacatggcagca 22033618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 22099650 - 22099718
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||| ||||    
T  22099650 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacatggcagca 22099718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 22102613 - 22102545
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  22102613 tgactcatcaaactcccctacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggaagca 22102545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 21831237 - 21831188
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21831237 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaa 21831188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 22817818 - 22817762
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    |||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  22817818 taattaataactcatcaaactcccccacacttgaatctttgcttttcctcaagcaaa 22817762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 17484895 - 17484979
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  17484895 agataattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaatatggtagcataaaac 17484979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 56580534 - 56580607
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  56580534 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaa 56580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 18081454 - 18081524
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcata 289  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  18081454 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcata 18081524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 45234219 - 45234301
Alignment:
Q  211 ataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  45234219 ataattattgactcatcaaactcccccagacttgaatctttgcttgtcctcaagtaaaaggcataaacatggtggcataaaac 45234301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 10630969 - 10630902
Alignment:
Q  220 gactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  10630969 gactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 10630902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 11496609 - 11496677
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  11496609 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 11496677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 13823133 - 13823065
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  13823133 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 13823065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 42709726 - 42709794
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  42709726 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 42709794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 18292158 - 18292084
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||| |||||    
T  18292158 tgactcatcaaactcccccacacttgaatctttgcttgtccacaagaaaaaggcataaacatggtagcacaaaac 18292084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 3354858 - 3354786
Alignment:
Q  221 actcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||||||||||| |||||    
T  3354858 actcatcaaactcccccacacttgaatagttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaac 3354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 15865715 - 15865647
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  15865715 taattattgactcctcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 15865647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 38426953 - 38426885
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaa 277  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  38426953 agataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaa 38426885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 15409597 - 15409534
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcata 275  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  15409597 taattattgactcatcaaactcccccacactagaatctttgcttgtcctcaagcaaaaggcata 15409534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 14653984 - 14654054
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  14653984 gataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 14654054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 10650608 - 10650540
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  10650608 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 10650540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 15254568 - 15254512
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcata 275  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  15254568 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 15254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 15260104 - 15260172
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||| ||||    
T  15260104 tgactcatcaaactcccccacacttgaatctttgcttttcctcaagcaaaaggcatagacatggcagca 15260172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 16682974 - 16682906
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| |||||| ||||    
T  16682974 tgactcatcaaactcccccacacttgaatctttgcttgtcatcaagcaaaaggcatagacatggcagca 16682906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 9488867 - 9488934
Alignment:
Q  213 aattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||    
T  9488867 aattaatgactcatcaaactcccccatacttcaatctttgcttgtcctcaagcaaaaggcatgaacat 9488934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 8092412 - 8092483
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||  |||||||||||||  |||| |||| |||||||||||||||||||| ||| | |||||||||    
T  8092412 agataattaacgactcatcaaactttcccatacttgaatctttgcttgtcctcaagaaaaagacataaacat 8092483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 17296244 - 17296298
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggca 273  Q
    ||||| ||||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  17296244 tgacttatcaaactcccccatgcttgaatctttgcttgtcctcaagcaaaaggca 17296298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 538740 - 538822
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  538740 agataataattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 538822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 4312784 - 4312705
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  4312784 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaa 4312705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 4461231 - 4461309
Alignment:
Q  213 aattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  4461231 aattattgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggcagcataaa 4461309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 20108599 - 20108515
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| | ||||||||| ||||||||||||    
T  20108599 agataattattgactcatcaaactcccccacacttgaatcttttattgtcctcaagcaaaagacataaacatagtagcataaaac 20108515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 8780924 - 8781003
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| | ||||||||    
T  8780924 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaaacaaaaggcataaacatagcagcataaa 8781003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 11921302 - 11921373
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  11921302 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagtcataaacatggtagcataa 11921373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 12548790 - 12548873
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||| | |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  12548790 agataataaatgactcatcaaactccccaacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 12548873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 23515297 - 23515219
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  23515297 agataataaatgactcatgaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 23515219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 16532316 - 16532243
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| | |||||||||||||||||||||    
T  16532316 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaa 16532243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 16633346 - 16633419
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| | |||||||||||||||||||||    
T  16633346 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaa 16633419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 9583113 - 9583045
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  9583113 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 9583045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 13658086 - 13658014
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  13658086 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatcaacatggtagcgtaaa 13658014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 14551319 - 14551251
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  14551319 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 14551251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 16465611 - 16465682
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||    
T  16465611 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacatagtagcataa 16465682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 18593347 - 18593416
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  18593347 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 18593416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 18618337 - 18618268
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  18618337 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 18618268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 825844 - 825776
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  825844 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 8718085 - 8718017
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||    
T  8718085 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgcataaacatagtagca 8718017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 9004182 - 9004098
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||| | ||| || |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  9004182 agataataaatgattcttcaaactcccccacacttgaatctttgtttgtcctcaagcaaaaggcataaacatagtagcataaaac 9004098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 9264929 - 9265005
Alignment:
Q  214 attattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| | |||||||    
T  9264929 attattaactcatcaaactcccccacacttgaatctttgcttgtcctcaaacaaaaggcataaacatagcagcataa 9265005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 12567244 - 12567168
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtag 285  Q
    ||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||||    
T  12567244 agataataaatgactcatcaaactcccccacacttgaatttttgcttgtcctcaagcaaaatgcataaacatggtag 12567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 14221713 - 14221781
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  14221713 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 14221781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 18287822 - 18287754
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  18287822 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 18287754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 27291557 - 27291489
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  27291557 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 27291489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 15916771 - 15916834
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatgg 282  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  15916771 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatgg 15916834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 13674076 - 13674007
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| | |||||||    
T  13674076 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacgtagtagcat 13674007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 15065989 - 15065921
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||||| ||||    
T  15065989 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcaaagacatggcagca 15065921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 16119844 - 16119912
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||| ||||||    
T  16119844 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacatatacatagtagca 16119912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 9194534 - 9194597
Alignment:
Q  214 attattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaa 277  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| ||||||||    
T  9194534 attattgactcatcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaa 9194597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 4791367 - 4791445
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||| |  ||||| |||||| ||||    
T  4791367 agataattattgacttatcaaactcccccatacttgaatctttgcttgtcctcaagcagaatgcatagacatggcagca 4791445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 5397345 - 5397275
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||| | |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||    
T  5397345 gataataaatgactcatcaaactcccctacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 5397275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 15206570 - 15206640
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||    
T  15206570 gataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcatagacat 15206640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 48801771 - 48801839
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||| ||||||    
T  48801771 tgactgatcaaactcccccacacttgaatcttttcttgtcctcaagcaaaaggcatacacatagtagca 48801839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 15348601 - 15348532
Alignment:
Q  211 ataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||| |||||||| ||||| |||| |||||||| ||||||||||| ||| |||||||||||    
T  15348601 ataattattgacttatcaaacttccccaaacttgaatctttgtttgtcctcaagtaaaaggcataaacat 15348532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 6713057 - 6713124
Alignment:
Q  213 aattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||  | ||||||||| | |||| |||||||||||||||||||||||| |||||||||||    
T  6713057 aattattgacttgttaaactcccctatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 6713124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 15522578 - 15522517
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||| |||||  | |||| |||||||||||||||||||| ||| |||||||||||    
T  15522578 tgactcatcaagctcccatatacttgaatctttgcttgtcctcaagtaaaaggcataaacat 15522517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 5500250 - 5500334
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  5500250 agataataattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaac 5500334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 25144742 - 25144826
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  25144742 agataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaac 25144826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 23644165 - 23644092
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||    
T  23644165 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaaa 23644092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 23798910 - 23798991
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||||||| ||||||||||| ||||||||||||    
T  23798910 taattattgactcatcaaactcccccacacttgaatctttgattatcctcaagcaaaaggcataaacatagtagcataaaac 23798991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 25804252 - 25804323
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  25804252 agataattaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 25804323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 22665282 - 22665214
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  22665282 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 22665214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 24171573 - 24171510
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcata 275  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  24171573 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 24171510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 24178181 - 24178260
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||| | ||||||||    
T  24178181 taattattgactcatcaaactcccccacacttgaatctttgcttgtcttcaaacaaaaggcataaacatagcagcataaa 24178260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 27627803 - 27627732
Alignment:
Q  217 attgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  27627803 attgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 27627732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 17590629 - 17590559
Alignment:
Q  217 attgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  17590629 attgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 17590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 16775871 - 16775802
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  16775871 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 16775802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 22044655 - 22044724
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  22044655 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 22044724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 25357731 - 25357662
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  25357731 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 25357662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 23159380 - 23159448
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  23159380 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 23159448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 23570637 - 23570705
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  23570637 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 23570705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 27631716 - 27631648
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  27631716 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 27631648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 27768811 - 27768879
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  27768811 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 27768879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 24506877 - 24506798
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| | ||||||||| | ||||||||    
T  24506877 taattattgactcatcaaactcccccacacttgaatcttttattgtcctcaagcaaaagacataaacatagcagcataaa 24506798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 24795280 - 24795339
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaac 278  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  24795280 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaac 24795339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 25337639 - 25337718
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||| |||||||| || | ||||||||    
T  25337639 taattattgactcatcaaattcccccatacttgaatctttgcttgtcctcaagaaaaaggcataaatatagcagcataaa 25337718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 25370870 - 25370941
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  25370870 agataattaatgactcattcaactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacat 25370941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 24321396 - 24321328
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||| ||| |||||||    
T  24321396 taattaatgactcattaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcgtaaacat 24321328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 11610 - 11669
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaac 278  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  11610 tgactcatcaaactcccccacacttgcctctttgcttgtcctcaagcaaaaggcataaac 11669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 117763 - 117704
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaac 278  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||| |||||||||    
T  117763 tgactcatcaaactcccccacacttgcatatttgcttgtcctcaagcaaaaggcataaac 117704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 23257565 - 23257625
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||| |||||||||||    
T  23257565 tgactcatcaaactcccc-atacttgaatctttgcttgtcctcaagcaaaaggcataaacat 23257625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 24019056 - 24019123
Alignment:
Q  213 aattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||| |||||| ||||||| |||| |||||||  |||||||||| |||| | |||||||||    
T  24019056 aattattgacttatcaaattcccccatacttgaatctttttttgtcctcaaacaaaagacataaacat 24019123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 29955923 - 29955870
Alignment:
Q  215 ttattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    |||||| || |||||||| ||| | |||| ||||||||||||||||||||||||    
T  29955923 ttattggcttatcaaacttcccgatacttgaatctttgcttgtcctcaagcaaa 29955870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 8874 - 8800
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8874 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaac 8800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 9e-30; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 10546931 - 10547005
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10546931 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaac 10547005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 13001420 - 13001494
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13001420 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaac 13001494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 3245576 - 3245655
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  3245576 taattattgactgatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaa 3245655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 4382966 - 4382896
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcata 289  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  4382966 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcata 4382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 14348576 - 14348654
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |||||    
T  14348576 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggtaacataa 14348654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 20156500 - 20156581
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||||||||    
T  20156500 agataattattgactcatcaaactcccccacacttgaatc-ttgcttgtcctcaagcaaaatgcataaacatggtagcataaa 20156581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 17388060 - 17387976
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  17388060 agataattaatgagtcatcaaactcccccacacttgaatctttgcttgtccttaagcaaaaggcatcaacatggtagcataaaac 17387976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 22637923 - 22637839
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    |||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||| ||||| ||||||||||||||||||    
T  22637923 agataattattgactcatcaaactcccctacacttgaatctttacttgtgctcaagcaaaaggcatcaacatggtagcataaaac 22637839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 13097934 - 13097852
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| | |||||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  13097934 agataataaatgactcatcaaactcccccacatttgaatctttgcttgtcctcaagtaaaaggcataaacatggtagcataaa 13097852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 12160202 - 12160275
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  12160202 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgcataaacatggtggcataaaa 12160275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 9360966 - 9361034
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  9360966 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 9361034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 10602467 - 10602535
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  10602467 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 10602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 13504876 - 13504944
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  13504876 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 13504944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 16448755 - 16448823
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  16448755 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 16448823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 2721523 - 2721445
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  2721523 taattattgactcatcaaactcccc-acacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcataaa 2721445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 11398436 - 11398357
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| || | ||||||||    
T  11398436 taattattgactcatcaaactcccccacacttgaatatttgcttgtcctcaagcaaaaggcataaatatagcagcataaa 11398357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 16373558 - 16373629
Alignment:
Q  217 attgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  16373558 attgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 16373629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 20225742 - 20225821
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||||||| | ||||||||    
T  20225742 taattattgactcatcaaactcccccatacttaaatctttgtttgtcctcaagcaaaagacataaacatagcagcataaa 20225821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 13601287 - 13601221
Alignment:
Q  214 attattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  13601287 attattgactcatcaaactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacat 13601221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 7600575 - 7600506
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  7600575 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 7600506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 10160168 - 10160237
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  10160168 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 10160237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 12187071 - 12187140
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  12187071 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 12187140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 13690830 - 13690749
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||| | ||||||||||||||||||||||||| |||||||  ||||| ||||||||| ||||||||||||||||||||||    
T  13690830 gataataaatgactcatcaaactcccccacacttgaatctttagttgtcatcaagcaaaaggcataaacatggtagcataaa 13690749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 15556937 - 15557006
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||    
T  15556937 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagcat 15557006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 15645221 - 15645152
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  15645221 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 15645152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 37942598 - 37942529
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  37942598 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 37942529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 3279411 - 3279343
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||    
T  3279411 taattattgactcatcaaactcccccacacttgaatctttgtttgtcctcaagcaaaaggcatagacat 3279343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 3339221 - 3339289
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  3339221 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 3339289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 11947627 - 11947559
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||||||    
T  11947627 tgactcatcaaactcccccacacttgaatctttacttgtcctcaagcaaaaggcataaacatagtagca 11947559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 12776529 - 12776597
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  12776529 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 12776597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 27356712 - 27356784
Alignment:
Q  208 cagataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||| | | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  27356712 cagataataaataactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 27356784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 20584323 - 20584261
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatg 281  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  20584323 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatg 20584261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 10147231 - 10147162
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||||| ||||||||||| |||||||    
T  10147231 tgactcatcaaactcccccatacttgagtctttgcttgtcctcaagcaaaaggcataaacatagtagcat 10147162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 13187412 - 13187481
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    ||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  13187412 tgactgatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 13187481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 14445759 - 14445824
Alignment:
Q  215 ttattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||    
T  14445759 ttattgactcatcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaggcatagacat 14445824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 13136207 - 13136267
Alignment:
Q  221 actcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatg 281  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  13136207 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatg 13136267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 15619278 - 15619346
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  15619278 tgactcatcaaactgccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 15619346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 15946829 - 15946773
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcata 275  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  15946829 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 15946773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 1993023 - 1992944
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||| | | ||||| ||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  1993023 taattattgactcatcaaactctctcccacttgaatctttgcttatgctcaagcaaaaggcataaacatagtagcataaa 1992944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 6815088 - 6815019
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||| |||||||| || |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  6815088 tgactcattaaactccctcatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 6815019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 12193485 - 12193554
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    ||||| |||||||||||||| || | |||||||||||||||||||||||| ||||||||||| |||||||    
T  12193485 tgacttatcaaactcccccatacctgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 12193554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 13068369 - 13068313
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  13068369 taattattgactcatcaaactcccccacacttgaatctttacttgtcctcaaccaaa 13068313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 13195453 - 13195521
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||| |||||| ||||    
T  13195453 tgactcatcaaactcccacacacttgaatctttgcttgtcctcaagcaaaatgcatagacatggcagca 13195521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 17045902 - 17045843
Alignment:
Q  232 tcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||| |||||||||||||||||||||||| |||||||| || ||||||||||    
T  17045902 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaaatagtagcataaa 17045843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 17048062 - 17048003
Alignment:
Q  232 tcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||| |||||||||||||||||||||||| |||||||| || ||||||||||    
T  17048062 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaaatagtagcataaa 17048003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 8686382 - 8686442
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaaca 279  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| ||||  |||||||||    
T  8686382 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaaacaaaaagcataaaca 8686442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 2005542 - 2005499
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgctt 255  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  2005542 taattattgactcatcaaactcccccacacttgaatctttgctt 2005499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 164388 - 164472
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  164388 agataataattgactcatcaaactcccccacacttgaatctttgcttatcctcaagcaaaaggcataaacatggtagcacaaaac 164472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 172329 - 172250
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  172329 taattattgacttatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcataaa 172250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 162072 - 162002
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  162072 gataattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 162002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 2181276 - 2181200
Alignment:
Q  217 attgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2181276 attgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaac 2181200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 25963469 - 25963391
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||    
T  25963469 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataa 25963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 25968116 - 25968038
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||    
T  25968116 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataa 25968038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 30671795 - 30671873
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||    
T  30671795 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagtagcataa 30671873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 18448364 - 18448280
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  18448364 agataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacttggtagcacaaaac 18448280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 21560539 - 21560621
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| | ||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21560539 agataataaatgaatcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 21560621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 29595919 - 29595837
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| | ||||||||||||||||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  29595919 agataataaatgactcatcaaactccctcacacttgaatctttgcttgtcctcaagcaaaaagcataaacatggtagcataaa 29595837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 23023317 - 23023236
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||||||||||||||    
T  23023317 agataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaagtcttaaacatggtagcataa 23023236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 15699775 - 15699707
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  15699775 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 15699707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 18184873 - 18184941
Alignment:
Q  223 tcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  18184873 tcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 18184941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 22165544 - 22165612
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  22165544 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 22165612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 22244032 - 22243964
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  22244032 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 22243964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 18854241 - 18854159
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| | |||||||||||||||||||| |||| ||||||| |||||||||||||||| |||||||| |||||||||||||    
T  18854241 agataataaatgactcatcaaactcccccatacttgaatcttttcttgtcctcaagcaaaaggcataaatatggtagcataaa 18854159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 22061496 - 22061566
Alignment:
Q  217 attgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  22061496 attgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 22061566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 25631254 - 25631332
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | |||  |||||||||||||||||    
T  25631254 agataattatttactcatcaaactcccccacacttgaatctttgcttgtcctcaggaaaaatgcataaacatggtagca 25631332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 20170463 - 20170394
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  20170463 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 20170394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 24855240 - 24855309
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  24855240 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 24855309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 11204065 - 11203997
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||||    
T  11204065 tgactcatcaaactcccccacacttaaatatttgcttgtcctcaagcaaaaggcatagacatggcagca 11203997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 18731947 - 18731875
Alignment:
Q  208 cagataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||| |||||| ||||    
T  18731947 cagataattattgactcatcaaactcctccacacttgaatcttagcttgtcctcaagcaaaaggcatagacat 18731875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 20218969 - 20219049
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    |||||||||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||| | |||||||||    
T  20218969 taattattgactcatcaaactcccccacacatgaatctttgcttctcttcaagcaaaaggcataaacatagcagcataaaa 20219049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 22112994 - 22113074
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    |||||||||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||| | |||||||||    
T  22112994 taattattgactcatcaaactcccccacacatgaatctttgcttctcttcaagcaaaaggcataaacatagcagcataaaa 22113074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 20107784 - 20107847
Alignment:
Q  228 aaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  20107784 aaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaa 20107847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 25625914 - 25625832
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| | |||||||||||||||||||| |||| ||| |||||||||||||||||||| ||  ||||||||||||||||||    
T  25625914 agataataaatgactcatcaaactcccccatacttgaatttttgcttgtcctcaagcaaaaggtgtaaacatggtagcataaa 25625832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 35271042 - 35270972
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  35271042 gataataaatgactcatcaaacacccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 35270972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 22767115 - 22767172
Alignment:
Q  223 tcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  22767115 tcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 22767172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 29686669 - 29686601
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||||||||| |||| |||| ||||||| |||||||||||||||  |||||||||||    
T  29686669 taattattgactcatcaaactctcccatacttgaatcttttcttgtcctcaagcaagaggcataaacat 29686601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 23517819 - 23517887
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||| ||||||| || ||||||||||| |||| ||||||||||| |||||||||||| |||||| ||||    
T  23517819 taataattgacttataaaactcccccatacttgaatctttgcttatcctcaagcaaaaggcatacacat 23517887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 210 - 293
Target Start/End: Original strand, 251856 - 251939
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    |||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  251856 gataataaatgactcatcaaactcccccacacttgaatctttacttgtcctcaagcaaatggcataaacatggtagcacaaaac 251939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 1320 - 1250
Alignment:
Q  222 ctcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  1320 ctcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaa 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 2274 - 2356
Alignment:
Q  211 ataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2274 ataataattaactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaaac 2356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 1044 - 974
Alignment:
Q  221 actcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  1044 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 443 - 361
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  443 agataataaatgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 361  T

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Target: scaffold0026 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 11279 - 11197
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  11279 agataataaatgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcataaa 11197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 210 - 292
Target Start/End: Complemental strand, 121176 - 121094
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  121176 gataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaa 121094  T

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Target: scaffold0162 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 35090 - 35171
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||| | ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  35090 gataataaatgactcatcaaactcccccacacttgaatctttccttgtcctcaagcaaaaggcataaacatggtagcataaa 35171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 58623 - 58696
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  58623 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagtaaaaggcataaacatggtagcataaaa 58696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 97721 - 97794
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  97721 tgactcatcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaggcataaacatggtagcataaaa 97794  T

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Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 25697 - 25658
Alignment:
Q  229 aactcccccacacttaaatctttgcttgtcctcaagcaaat 269  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  25697 aactcccccacacttaag-ctttgcttgtcctcaagcaaat 25658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 52938618 - 52938690
Alignment:
Q  221 actcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  52938618 actcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataatcatggtagcataaaac 52938690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 3990159 - 3990085
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  3990159 tgactcatcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaacatggtagcataaaac 3990085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 17094596 - 17094665
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  17094596 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 17094665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 19875632 - 19875700
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  19875632 taattattgactcattaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 19875700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 21798655 - 21798726
Alignment:
Q  217 attgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  21798655 attgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 21798726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 27047094 - 27047027
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagc 286  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  27047094 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagc 27047027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 8653346 - 8653268
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  8653346 agataataaatgactcattaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 8653268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 14070725 - 14070656
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  14070725 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 14070656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 19364256 - 19364175
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||| | ||||||||||    
T  19364256 taattaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgcatagacatagcagcataaaac 19364175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 21784460 - 21784528
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||    
T  21784460 taattattgactcatcaaactcccccacacttgaatatttgcttgtcctcaagcaaaaggcatagacat 21784528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 4027910 - 4027839
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| |||||| ||||    
T  4027910 agataattattgactcatcaaactcccccacccttgaatctttgcttttcctcaagcaaaaggcatagacat 4027839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 20237676 - 20237618
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaa 277  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  20237676 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaa 20237618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 8947499 - 8947555
Alignment:
Q  208 cagataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaag 264  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  8947499 cagataattattgactcatcaaactcccccacacttgaatctttacttgtcctcaag 8947555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 16382564 - 16382631
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| || ||||||||    
T  16382564 taattattgactca-caaactcccccatacttgaatctttgcttgtcctcaagcaaaaggaataaacat 16382631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 38493 - 38576
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  38493 agataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaagcataaacatggtagcacaaaa 38576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 24219975 - 24219892
Alignment:
Q  210 gataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    |||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| |||||    
T  24219975 gataataaatgactcatcaaactcccccacacttgagtctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaac 24219892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 23600621 - 23600699
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  23600621 agataataaatgactcatcaaattcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 23600699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 15735754 - 15735686
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  15735754 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 15735686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 20595826 - 20595894
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  20595826 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 20595894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 20602112 - 20602180
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  20602112 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 20602180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 20608403 - 20608471
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  20608403 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 20608471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 18073120 - 18073051
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  18073120 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 18073051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 20790709 - 20790778
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  20790709 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 20790778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 23748271 - 23748202
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  23748271 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 23748202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 24940754 - 24940685
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  24940754 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 24940685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 22317508 - 22317576
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  22317508 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 22317576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 25006803 - 25006871
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  25006803 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 25006871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 30759650 - 30759718
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  30759650 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 30759718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 20444824 - 20444907
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaa 292  Q
    ||||||| | |||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||| ||||    
T  20444824 agataataaatgactcattaaactcccccacacttgaatctttgattgtcctcaagcaaaaggcataaatatggtagcacaaaa 20444907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 24953169 - 24953238
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| || |||||||| |||||||    
T  24953169 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggtataaacatagtagcat 24953238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 21387617 - 21387549
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||    
T  21387617 taattaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagaaaaatgcataaacat 21387549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 25116166 - 25116234
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||| ||||    
T  25116166 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatggacatggcagca 25116234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 26847864 - 26847796
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||| |||||| ||||    
T  26847864 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaaccaaaaggcatagacatggcagca 26847796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 18484207 - 18484268
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||    
T  18484207 tgactcatcaaactccccaacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 18484268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 25175256 - 25175305
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25175256 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaa 25175305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 22855784 - 22855716
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| | |||| |||||| ||||    
T  22855784 tgactcatgaaactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacatggcagca 22855716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 20916444 - 20916512
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||||||||||||| |||| | ||| |||| ||||||||||||||| |||||| ||||    
T  20916444 taattattgactcatcaaactcccctacacatgaatttttggttgtcctcaagcaaaaggcatagacat 20916512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 20622356 - 20622313
Alignment:
Q  245 aatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  20622356 aatctttgcttgtcctcaagcaaaaggcataaacatagtagcat 20622313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 27270607 - 27270564
Alignment:
Q  225 atcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  27270607 atcaaactcccccacacttgaatcattgcttgtcctcaagcaaa 27270564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 17412798 - 17412736
Alignment:
Q  211 ataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggca 273  Q
    ||||||||||||| |||||||||||||| |||| |||| ||| ||||| ||||||||| ||||    
T  17412798 ataattattgacttatcaaactcccccatacttgaatcattgtttgtcgtcaagcaaaaggca 17412736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 23710701 - 23710739
Alignment:
Q  249 tttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  23710701 tttgcttgtcctcaagcaaaaggcataaacatagtagca 23710739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 8156 - 8082
Alignment:
Q  217 attgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||    
T  8156 attgactcatcaaactcccccacacttgaatctttgcttgtcttcaagcaaaaggcataaacacggtagcataaa 8082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 10191 - 10269
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  10191 agataataaatgactcatcaaactcccccaaacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagca 10269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 14647 - 14729
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    ||||||| | |||||||||||||||||||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  14647 agataataaatgactcatcaaactcccccatacttgaatctttgcttgtcctcaagaaaaaggcataaacatggtagcataaa 14729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 498 - 579
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||| || ||||||||||||    
T  498 taattattgactcatcaaactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaatatagtagcataaaac 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 982 - 914
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  982 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 2837 - 2921
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaaac 293  Q
    ||||||| | ||||||||||||||||| || |||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  2837 agataataaatgactcatcaaactcccacatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaac 2921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 15898 - 15830
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  15898 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 15830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 123589 - 123521
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  123589 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagca 123521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 5306 - 5239
Alignment:
Q  213 aattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  5306 aattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 5239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 12806 - 12743
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcata 275  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  12806 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 12743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 2833 - 2755
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  2833 agataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 2755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 12990 - 13068
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataa 290  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||  ||||||||||| |||||||||    
T  12990 taattattgactcatcaaactccgccacacttgaatctttgcttgtcctcaagtaagaggcataaacatagtagcataa 13068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 12626 - 12548
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||    
T  12626 agataattaatgactcgtcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagca 12548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 232772 - 232850
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||    
T  232772 agataattaatgactcgtcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacatagtagca 232850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 10781 - 10713
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  10781 tgactcatcaaactcccccacactttaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 10713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 22143 - 22211
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  22143 taattattgactcattaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 22211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 22830 - 22774
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22830 taattattgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaa 22774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 1914 - 1835
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| |||||||||| |||||||| || | ||||||||    
T  1914 taattattgactcatcaaactcccccacacttgaatctttgattgttctcaagcaaaaggcataaatatagcagcataaa 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 699 - 620
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcataaa 291  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||| | ||||||||    
T  699 taattaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaatgtataaacatagcagcataaa 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 42315 - 42244
Alignment:
Q  209 agataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  42315 agataataaatgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 42244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 3529 - 3460
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| | |||||||    
T  3529 tgactcatcaaactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacgtagtagcat 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 1258 - 1189
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagcat 288  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||||| ||||||||| | |||||||    
T  1258 tgactcatcaaactcccccatacttgaatctttgcttttcctcaagcaaaaggcataaacgtagtagcat 1189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 50501 - 50562
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  50501 tgactcatcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 50562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 610 - 678
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||  ||||||| |||||||||    
T  610 tgactcatcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaagcataaatatggtagca 678  T

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Target: scaffold0117 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 45212 - 45272
Alignment:
Q  208 cagataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  45212 cagataattattgactcatcaaactcccccacacctgaatctttgcttgttctcaagcaaa 45272  T

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Target: scaffold0116 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 37731 - 37787
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaa 268  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  37731 taattattgactcatcaaattcccccacacttgaatctttgcttgtcctcaagcaaa 37787  T

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Target: scaffold0089 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 54844 - 54912
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacatggtagca 287  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |||||| ||||    
T  54844 tgactcatcaaactcccccacgcttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagca 54912  T

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Target: scaffold0088 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 37938 - 37870
Alignment:
Q  212 taattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||| | |||||||||    
T  37938 taattattgactcattaaactcccccacacttgaatcttttcttgccctcaagcaaaagccataaacat 37870  T

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Target: scaffold0094 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 1260 - 1193
Alignment:
Q  213 aattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    ||||| ||||| |||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||    
T  1260 aattaatgacttatcaaactcccccatacttgaatctttgcttgtccacaagcaaaaggcataaacat 1193  T

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Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 18266 - 18223
Alignment:
Q  221 actcatcaaactcccccacacttaaatctttgcttgtcctcaag 264  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  18266 actcatcaaactcccccacacttgaatctttgcttgtcctcaag 18223  T

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Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 72560 - 72622
Alignment:
Q  211 ataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcat 274  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||    
T  72560 ataattatt-actcatcaaactcccccacacttgaatctttacttttcctcaagcaaaaggcat 72622  T

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Target: scaffold0037; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 84750 - 84812
Alignment:
Q  211 ataattattgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcat 274  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||    
T  84750 ataattatt-actcatcaaactcccccacacttgaatctttacttttcctcaagcaaaaggcat 84812  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 83153 - 83214
Alignment:
Q  219 tgactcatcaaactcccccacacttaaatctttgcttgtcctcaagcaaatggcataaacat 280  Q
    |||||||| ||| ||||| | |||| ||| |||||||||||||||||||| |||||||||||    
T  83153 tgactcattaaaatcccctatacttgaatatttgcttgtcctcaagcaaaaggcataaacat 83214  T

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Target: scaffold0402 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 9138 - 9177
Alignment:
Q  229 aactcccccacacttaaatctttgcttgtcctcaagcaaat 269  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  9138 aactcccccacacttaac-ctttgcttgtcctcaagcaaat 9177  T

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