View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1369_low_7 (Length: 594)

Name: NF1369_low_7
Description: NF1369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1369_low_7
NF1369_low_7
[»] chr4 (45 HSPs)
chr4 (224-467)||(25904294-25904537)
chr4 (466-545)||(25906598-25906677)
chr4 (220-343)||(50681169-50681288)
chr4 (220-345)||(17204007-17204128)
chr4 (220-343)||(43505829-43505946)
chr4 (284-341)||(3155486-3155543)
chr4 (220-265)||(3155548-3155593)
chr4 (220-281)||(31076466-31076527)
chr4 (220-281)||(41336690-41336750)
chr4 (220-281)||(54069497-54069558)
chr4 (219-275)||(13216283-13216339)
chr4 (225-302)||(31851366-31851439)
chr4 (291-343)||(49202527-49202579)
chr4 (220-263)||(51630058-51630101)
chr4 (220-282)||(256857-256919)
chr4 (222-276)||(15177284-15177338)
chr4 (289-343)||(44863097-44863151)
chr4 (220-281)||(403456-403517)
chr4 (217-250)||(25885819-25885852)
chr4 (220-281)||(42404078-42404139)
chr4 (220-265)||(52315277-52315322)
chr4 (220-264)||(17884014-17884058)
chr4 (220-276)||(19494848-19494904)
chr4 (223-265)||(437515-437558)
chr4 (220-279)||(3070053-3070112)
chr4 (220-275)||(9760375-9760430)
chr4 (220-316)||(18425711-18425802)
chr4 (227-265)||(2702985-2703023)
chr4 (219-265)||(3175896-3175942)
chr4 (220-270)||(29912889-29912939)
chr4 (220-266)||(39603527-39603573)
chr4 (219-265)||(42321958-42322004)
chr4 (291-341)||(44138442-44138492)
chr4 (224-266)||(44797830-44797872)
chr4 (219-265)||(49803156-49803202)
chr4 (223-265)||(50662815-50662857)
chr4 (220-265)||(7601704-7601749)
chr4 (219-260)||(23459578-23459619)
chr4 (288-344)||(27027-27083)
chr4 (289-344)||(19039660-19039716)
chr4 (237-281)||(33587051-33587095)
chr4 (221-265)||(41088329-41088373)
chr4 (217-265)||(44138504-44138552)
chr4 (295-343)||(47119086-47119134)
chr4 (220-248)||(52746920-52746948)
[»] chr5 (50 HSPs)
chr5 (220-418)||(40426558-40426755)
chr5 (7-63)||(3920869-3920925)
chr5 (466-545)||(40424263-40424341)
chr5 (220-273)||(35445992-35446045)
chr5 (220-276)||(42500305-42500361)
chr5 (228-344)||(3735579-3735691)
chr5 (218-342)||(7319089-7319209)
chr5 (110-193)||(11835505-11835588)
chr5 (220-347)||(13697839-13697962)
chr5 (220-343)||(32372495-32372614)
chr5 (220-281)||(16458059-16458119)
chr5 (208-258)||(11835229-11835279)
chr5 (220-343)||(24030482-24030601)
chr5 (220-269)||(3932765-3932814)
chr5 (220-269)||(9107053-9107102)
chr5 (225-343)||(12554334-12554448)
chr5 (220-265)||(14932235-14932280)
chr5 (238-340)||(25461744-25461842)
chr5 (220-265)||(37112338-37112383)
chr5 (221-276)||(29925775-29925830)
chr5 (219-265)||(9202827-9202873)
chr5 (220-265)||(4014504-4014549)
chr5 (219-264)||(10363696-10363741)
chr5 (238-344)||(25461853-25461955)
chr5 (221-265)||(11615453-11615497)
chr5 (217-265)||(12425516-12425564)
chr5 (221-281)||(15015780-15015840)
chr5 (233-330)||(31038183-31038276)
chr5 (221-344)||(7706057-7706179)
chr5 (289-344)||(28776855-28776910)
chr5 (219-265)||(7674593-7674639)
chr5 (288-334)||(7984868-7984914)
chr5 (220-343)||(25460963-25461081)
chr5 (233-316)||(31047421-31047500)
chr5 (220-250)||(36797168-36797198)
chr5 (223-261)||(40864671-40864709)
chr5 (217-263)||(42569057-42569103)
chr5 (220-265)||(465899-465944)
chr5 (290-343)||(3520302-3520355)
chr5 (220-265)||(10639898-10639943)
chr5 (219-248)||(12595819-12595848)
chr5 (224-281)||(36227724-36227781)
chr5 (218-267)||(39594751-39594799)
chr5 (222-262)||(4855646-4855686)
chr5 (221-265)||(7853603-7853647)
chr5 (217-265)||(12595528-12595576)
chr5 (220-248)||(30585509-30585537)
chr5 (236-284)||(31051824-31051872)
chr5 (288-344)||(32703582-32703638)
chr5 (217-265)||(42583094-42583142)
[»] chr3 (43 HSPs)
chr3 (220-343)||(30956706-30956825)
chr3 (220-343)||(30972518-30972637)
chr3 (220-344)||(20880347-20880466)
chr3 (220-330)||(46778307-46778413)
chr3 (220-343)||(35959536-35959655)
chr3 (220-275)||(10704653-10704708)
chr3 (220-281)||(20170452-20170513)
chr3 (287-344)||(34034041-34034098)
chr3 (220-276)||(583980-584036)
chr3 (220-275)||(2719404-2719459)
chr3 (220-344)||(3845642-3845762)
chr3 (220-275)||(24684903-24684958)
chr3 (220-274)||(12862327-12862381)
chr3 (219-265)||(15304426-15304472)
chr3 (222-276)||(29520413-29520466)
chr3 (220-265)||(2128331-2128376)
chr3 (220-265)||(44061103-44061148)
chr3 (287-344)||(47132247-47132304)
chr3 (288-344)||(139817-139873)
chr3 (287-343)||(34235209-34235265)
chr3 (220-275)||(466137-466192)
chr3 (222-281)||(5331223-5331281)
chr3 (220-275)||(21335610-21335665)
chr3 (222-281)||(29520561-29520619)
chr3 (222-276)||(5331376-5331429)
chr3 (219-265)||(10101555-10101601)
chr3 (219-265)||(10212480-10212526)
chr3 (220-343)||(36631131-36631250)
chr3 (219-265)||(37689463-37689509)
chr3 (219-265)||(42809246-42809292)
chr3 (220-273)||(849599-849652)
chr3 (225-342)||(1508665-1508779)
chr3 (217-265)||(34638041-34638090)
chr3 (220-276)||(37689167-37689221)
chr3 (220-265)||(42808924-42808969)
chr3 (217-245)||(14145877-14145905)
chr3 (286-342)||(24085457-24085513)
chr3 (220-264)||(35696206-35696250)
chr3 (220-248)||(36189528-36189556)
chr3 (219-263)||(36783413-36783457)
chr3 (222-266)||(39602291-39602335)
chr3 (228-264)||(49465751-49465787)
chr3 (233-265)||(49739512-49739544)
[»] chr1 (60 HSPs)
chr1 (220-343)||(51688576-51688695)
chr1 (220-344)||(14331659-14331779)
chr1 (228-344)||(37473269-37473381)
chr1 (220-273)||(47432033-47432086)
chr1 (228-343)||(17830025-17830136)
chr1 (233-275)||(7107605-7107647)
chr1 (219-265)||(8852805-8852851)
chr1 (221-271)||(26678842-26678892)
chr1 (220-281)||(27976524-27976585)
chr1 (220-273)||(30582028-30582081)
chr1 (222-343)||(3234105-3234222)
chr1 (217-264)||(473110-473157)
chr1 (220-344)||(1510390-1510509)
chr1 (220-271)||(24915131-24915182)
chr1 (221-341)||(29904633-29904748)
chr1 (220-263)||(51190808-51190851)
chr1 (217-344)||(41505557-41505679)
chr1 (220-281)||(37631639-37631700)
chr1 (220-265)||(45145171-45145216)
chr1 (288-345)||(47498977-47499034)
chr1 (242-343)||(1509623-1509720)
chr1 (217-265)||(4256119-4256167)
chr1 (220-268)||(13809940-13809988)
chr1 (220-276)||(18556861-18556917)
chr1 (220-268)||(30581744-30581792)
chr1 (220-260)||(41184730-41184770)
chr1 (252-344)||(17727207-17727295)
chr1 (289-344)||(27820475-27820530)
chr1 (219-262)||(31517819-31517862)
chr1 (218-265)||(34952160-34952207)
chr1 (218-261)||(36070199-36070242)
chr1 (220-283)||(37769740-37769803)
chr1 (223-265)||(289185-289227)
chr1 (224-262)||(9572192-9572230)
chr1 (217-263)||(15687150-15687196)
chr1 (224-274)||(30043855-30043905)
chr1 (219-261)||(45990137-45990179)
chr1 (217-266)||(1232969-1233018)
chr1 (220-265)||(7028237-7028282)
chr1 (220-265)||(11560629-11560674)
chr1 (220-281)||(14385843-14385904)
chr1 (208-265)||(27146316-27146373)
chr1 (220-342)||(33541788-33541906)
chr1 (208-265)||(36151573-36151630)
chr1 (220-281)||(37517274-37517335)
chr1 (291-344)||(38247324-38247376)
chr1 (228-281)||(49938661-49938714)
chr1 (220-260)||(1531003-1531043)
chr1 (225-265)||(3887717-3887757)
chr1 (223-263)||(4549813-4549853)
chr1 (245-281)||(11607687-11607723)
chr1 (217-265)||(27145812-27145860)
chr1 (228-264)||(30191937-30191973)
chr1 (223-275)||(34795508-34795560)
chr1 (220-263)||(36872215-36872259)
chr1 (217-265)||(37841943-37841991)
chr1 (238-274)||(38189695-38189731)
chr1 (221-281)||(43990180-43990240)
chr1 (225-261)||(46252767-46252803)
chr1 (217-257)||(47498913-47498953)
[»] chr2 (46 HSPs)
chr2 (220-344)||(41407171-41407291)
chr2 (220-338)||(32592463-32592577)
chr2 (220-344)||(42659231-42659351)
chr2 (220-344)||(15757739-15757866)
chr2 (220-285)||(41812170-41812235)
chr2 (220-344)||(12464553-12464673)
chr2 (220-275)||(41241212-41241267)
chr2 (220-275)||(42868541-42868596)
chr2 (224-281)||(26201957-26202015)
chr2 (220-265)||(4026762-4026807)
chr2 (220-265)||(42420374-42420419)
chr2 (220-276)||(15305591-15305647)
chr2 (220-341)||(41851408-41851525)
chr2 (218-268)||(10619293-10619343)
chr2 (220-274)||(43279607-43279661)
chr2 (224-281)||(3311973-3312030)
chr2 (226-271)||(3932289-3932334)
chr2 (220-265)||(10494613-10494658)
chr2 (219-256)||(11863729-11863766)
chr2 (224-281)||(20933684-20933741)
chr2 (220-277)||(31561833-31561890)
chr2 (220-281)||(45229441-45229502)
chr2 (220-288)||(2227088-2227156)
chr2 (217-265)||(35459855-35459903)
chr2 (219-262)||(18962117-18962160)
chr2 (286-341)||(27695729-27695784)
chr2 (288-343)||(43570297-43570352)
chr2 (227-265)||(5998789-5998827)
chr2 (219-265)||(7825197-7825243)
chr2 (217-267)||(13325513-13325563)
chr2 (220-262)||(36114367-36114409)
chr2 (220-265)||(3611171-3611216)
chr2 (220-265)||(9195358-9195403)
chr2 (291-344)||(26143777-26143830)
chr2 (220-265)||(42457893-42457938)
chr2 (216-265)||(42907304-42907353)
chr2 (225-265)||(2195906-2195946)
chr2 (219-263)||(18066075-18066119)
chr2 (228-276)||(22971606-22971653)
chr2 (217-265)||(23747249-23747297)
chr2 (225-265)||(26143726-26143766)
chr2 (288-344)||(33981031-33981087)
chr2 (220-248)||(36114603-36114631)
chr2 (220-276)||(39073769-39073825)
chr2 (221-265)||(39567848-39567892)
chr2 (225-265)||(43199359-43199399)
[»] chr8 (29 HSPs)
chr8 (220-343)||(12497311-12497435)
chr8 (220-343)||(14956375-14956494)
chr8 (225-344)||(12976086-12976198)
chr8 (228-344)||(1058162-1058274)
chr8 (220-343)||(38750229-38750348)
chr8 (234-344)||(32975930-32976036)
chr8 (220-344)||(35534691-35534809)
chr8 (220-281)||(42043425-42043486)
chr8 (220-305)||(10758336-10758417)
chr8 (217-265)||(41475137-41475185)
chr8 (217-265)||(3537108-3537156)
chr8 (233-281)||(29168145-29168193)
chr8 (219-265)||(40280284-40280330)
chr8 (219-257)||(42237501-42237539)
chr8 (219-265)||(42597346-42597392)
chr8 (220-276)||(4526338-4526392)
chr8 (291-340)||(9956949-9956998)
chr8 (220-281)||(16825617-16825678)
chr8 (220-281)||(25930634-25930695)
chr8 (223-260)||(31716314-31716351)
chr8 (219-260)||(35374452-35374493)
chr8 (287-344)||(40981000-40981057)
chr8 (225-261)||(2364558-2364594)
chr8 (217-245)||(2595074-2595102)
chr8 (217-265)||(26215441-26215489)
chr8 (231-263)||(26370935-26370967)
chr8 (217-281)||(35644058-35644122)
chr8 (217-265)||(37444492-37444540)
chr8 (229-281)||(38353279-38353330)
[»] chr7 (44 HSPs)
chr7 (223-344)||(45004636-45004753)
chr7 (222-280)||(45806408-45806466)
chr7 (221-275)||(119845-119899)
chr7 (220-281)||(46078076-46078137)
chr7 (219-344)||(21568707-21568828)
chr7 (220-276)||(48469978-48470034)
chr7 (220-324)||(45806557-45806657)
chr7 (225-344)||(33128627-33128742)
chr7 (220-281)||(420289-420350)
chr7 (234-344)||(23989578-23989684)
chr7 (233-281)||(4970881-4970929)
chr7 (217-265)||(30133994-30134042)
chr7 (220-275)||(45264028-45264085)
chr7 (220-281)||(19302639-19302700)
chr7 (220-265)||(28613614-28613659)
chr7 (217-250)||(30180011-30180044)
chr7 (224-281)||(33266568-33266625)
chr7 (220-265)||(43152982-43153027)
chr7 (222-343)||(18865132-18865249)
chr7 (220-276)||(30571011-30571067)
chr7 (224-276)||(31247612-31247664)
chr7 (221-281)||(39279892-39279951)
chr7 (220-259)||(20258463-20258502)
chr7 (220-259)||(20269527-20269566)
chr7 (237-276)||(31247666-31247705)
chr7 (214-265)||(37832213-37832264)
chr7 (289-344)||(46139822-46139877)
chr7 (288-343)||(47177517-47177572)
chr7 (234-281)||(48140145-48140192)
chr7 (298-344)||(11619340-11619386)
chr7 (219-261)||(12835016-12835058)
chr7 (221-259)||(34083606-34083644)
chr7 (219-261)||(40689065-40689107)
chr7 (287-336)||(21619295-21619344)
chr7 (219-264)||(26935629-26935674)
chr7 (224-269)||(39279704-39279749)
chr7 (217-250)||(39967880-39967913)
chr7 (220-265)||(40009415-40009460)
chr7 (226-271)||(44216861-44216906)
chr7 (227-259)||(6630551-6630583)
chr7 (220-281)||(20234410-20234473)
chr7 (225-281)||(20526375-20526431)
chr7 (288-340)||(33552955-33553007)
chr7 (288-344)||(38500062-38500118)
[»] chr6 (30 HSPs)
chr6 (220-281)||(30536638-30536699)
chr6 (220-268)||(8147644-8147692)
chr6 (220-325)||(18076085-18076186)
chr6 (220-276)||(35070710-35070766)
chr6 (220-344)||(24626165-24626285)
chr6 (217-265)||(264316-264364)
chr6 (217-265)||(9093633-9093681)
chr6 (221-267)||(4163118-4163164)
chr6 (221-267)||(4224739-4224785)
chr6 (219-265)||(10728577-10728623)
chr6 (219-265)||(29274308-29274354)
chr6 (220-281)||(6016455-6016516)
chr6 (220-305)||(6909952-6910034)
chr6 (220-281)||(30536407-30536468)
chr6 (239-344)||(6538387-6538488)
chr6 (217-265)||(9559618-9559666)
chr6 (217-265)||(20671942-20671990)
chr6 (224-275)||(31623495-31623546)
chr6 (219-265)||(11363447-11363493)
chr6 (238-344)||(30926410-30926510)
chr6 (220-266)||(33117486-33117532)
chr6 (220-265)||(837296-837341)
chr6 (217-250)||(3785777-3785810)
chr6 (217-250)||(3785871-3785904)
chr6 (219-264)||(18129803-18129848)
chr6 (220-281)||(18690423-18690484)
chr6 (220-257)||(28621190-28621227)
chr6 (220-248)||(8349744-8349772)
chr6 (217-265)||(24836276-24836324)
chr6 (217-265)||(31624203-31624251)
[»] scaffold0024 (2 HSPs)
scaffold0024 (217-265)||(21355-21403)
scaffold0024 (217-264)||(58883-58930)
[»] scaffold0018 (1 HSPs)
scaffold0018 (225-344)||(157977-158092)
[»] scaffold0528 (1 HSPs)
scaffold0528 (233-316)||(1060-1139)
[»] scaffold0103 (1 HSPs)
scaffold0103 (219-265)||(51513-51559)


Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-125; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 224 - 467
Target Start/End: Original strand, 25904294 - 25904537
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaa 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  25904294 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcttgtgctataatctgcaa 25904393  T
Q  324 atgagttgtttatccaaacagtaactaagtatcactctccaatacatagtccttaaaattatataaaaacaattagtagatcttaatctatatgagttaa 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  25904394 atgagttgtttatccaaacagtaactaagtatcactctccaatacatagtccttaaaattatataaaaacaattagtagatcgtaatctatatgaattaa 25904493  T
Q  424 tgtttttctcaaattttaatcgtccaactcttgcaagtttgaga 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25904494 tgtttttctcaaattttaatcgtccaactcttgcaagtttgaga 25904537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 466 - 545
Target Start/End: Original strand, 25906598 - 25906677
Alignment:
Q  466 gactgggttgttcaggtgagtcttttgcttctgtttcttgtcttggtgaaagtcttgaggatttgaggtgggggtattgg 545  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25906598 gactgggttgttcaggtgagtcttttgcttctgtttcttgtcttggtgaaagtcttaaggatttgaggtgggggtattgg 25906677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 50681169 - 50681288
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||| |||||||||||| | || |||||||||||| |||||||||||| ||||    | |||||||||||||||| | ||| |||||| ||    
T  50681169 aaaacaatttaacattattttatcttatcctataaaaatagcttttgtaagcttatacataa----acgcttatcatgataagttcttgtgctataagct 50681264  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
      |||| |||||||||||||||||    
T  50681265 ataaataagttgtttatccaaaca 50681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 345
Target Start/End: Complemental strand, 17204128 - 17204007
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||||| ||||||||||||| | |||||| |||||| |||||||||||||| | | |||| |    | ||||| |||||||||| ||| |||||| ||    
T  17204128 aaaacaatataactttattttaacatttgctataaaaacagcttatgtaagctaacacataagc----ggttatcgtgataagtgcttgttctataagct 17204033  T
Q  320 gcaaatgagttgtttatccaaacagt 345  Q
    |||||| |||||||||||||||||||    
T  17204032 gcaaataagttgtttatccaaacagt 17204007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 220 - 343
Target Start/End: Complemental strand, 43505946 - 43505829
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||     |||||||||||||  | |  ||| ||||||  |    
T  43505946 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcaagcttatacataa----gtgcttatcatgat--gcgtttgtgctataagtt 43505853  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    |||||| |||||||||||||||||    
T  43505852 gcaaataagttgtttatccaaaca 43505829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 3155543 - 3155486
Alignment:
Q  284 acatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaa 341  Q
    ||||||||||||||||||| || |||||||||| ||||| || |||||||||||||||    
T  3155543 acatgcttatcatgataagcgcttgtactataagctgcagataagttgtttatccaaa 3155486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 3155593 - 3155548
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||||||| || |||||||||||    
T  3155593 aaaacaatttaactttattttatcttttgctatagaaatagcttat 3155548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 31076466 - 31076527
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||| |||||  ||||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  31076466 aaaacagtttaaacttattttatcttttgctctaaaaatagcttatgcaagcttatacataa 31076527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 41336750 - 41336690
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| |||| |||| ||||    
T  41336750 aaaacaatttaactttattttatc-tttgctataaaaatagcttatgcaagcctatacataa 41336690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 54069497 - 54069558
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| ||||||||||||||| | |||||||||| |||| ||||||||| ||||    
T  54069497 aaaacaatttaacattattttatcttttgatataaaaatagcatatgcaagcttatacataa 54069558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 13216283 - 13216339
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||| |||||| ||||    
T  13216283 gaaaacgatttaactttattttatcttttgctataaaaataacttgtgtaagtttat 13216339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 31851439 - 31851366
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataag 302  Q
    ||||||||||||||||||| |||| | |||||||||||||||| ||||| || ||||    |||||||||||||||||    
T  31851439 aatttaactttattttatcatttgttataaaaatagcttatgtgagcttctacataa----atgcttatcatgataag 31851366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 49202579 - 49202527
Alignment:
Q  291 tatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaaca 343  Q
    ||||||| ||||||| |||||||||| |||||||| |||||||||||||||||    
T  49202579 tatcatgttaagtgcttgtactataagctgcaaataagttgtttatccaaaca 49202527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 51630101 - 51630058
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagctt 263  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  51630101 aaaacaatttaactttattttatcttttgctatataaatagctt 51630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 256919 - 256857
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataat 282  Q
    ||||||||||||| |||| |||||||||| | ||||||||||| | | |||||||||||||||    
T  256919 aaaacaatttaacattatattatcttttggtataaaaatagctgaagcaagcttatatataat 256857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 15177284 - 15177338
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||| ||||||||||||| ||| | ||||||||||||| |||||||||    
T  15177284 aacaatttaacgttattttatctttagctattaaaatagcttatgcaagcttata 15177338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 44863097 - 44863151
Alignment:
Q  289 cttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaaca 343  Q
    |||||||||| |||||| ||| |||||| |||||||| |||||||||||||||||    
T  44863097 cttatcatgacaagtgcttgtgctataagctgcaaataagttgtttatccaaaca 44863151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 403517 - 403456
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| ||||||||||||||||| ||||| || |||| | ||||||||| ||||    
T  403517 aaaacaatttaacgttattttatcttttgctataaaagtaacttacgcaagcttatagataa 403456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 25885852 - 25885819
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgct 250  Q
    ||||||||||||||||||||||||||||||||||    
T  25885852 acgaaaacaatttaactttattttatcttttgct 25885819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 42404078 - 42404139
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| ||||||||||||||||| |||||| ||| |||| || |||||| ||||    
T  42404078 aaaacaatttaacattattttatcttttgctataaaaagagcgtatgcaaacttatacataa 42404139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 52315277 - 52315322
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||    
T  52315277 aaaacaattaaactttatttcatcttttgctgtagaaatagcttat 52315322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 17884058 - 17884014
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagctta 264  Q
    ||||||||||||||||||||||||||||| | || ||||||||||    
T  17884058 aaaacaatttaactttattttatcttttgttatagaaatagctta 17884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 19494904 - 19494848
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||| |||||||||||| |||||| || || |||||||||||| ||||||    
T  19494904 aaaacaatttagctttattttatcatttgctatagaactagcttatgtaaccttata 19494848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 437515 - 437558
Alignment:
Q  223 acaatttaactttattttatcttttgctgt-aaaaatagcttat 265  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  437515 acaatttaactttattttatcttttgctataaaaaatagcttat 437558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 3070053 - 3070112
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatat 279  Q
    ||||||| |||||||||||| ||  |||| | |||||||| |||||||||||||||||||    
T  3070053 aaaacaagttaactttatttgattatttgttataaaaataacttatgtaagcttatatat 3070112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 9760430 - 9760375
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    |||| ||||||||||||||||||||||| |  |||||||| |||||| ||||||||    
T  9760430 aaaagaatttaactttattttatctttttcaataaaaataacttatgaaagcttat 9760375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 18425802 - 18425711
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataa 316  Q
    |||||||||||||||||||||| | |||||  | ||||||||| |||||| |||||| |||||||    ||||||||| ||||||| ||| ||||||    
T  18425802 aaaacaatttaactttattttaccatttgccat-aaaatagctcatgtaatcttatacataatca----cttatcatggtaagtgcttgtgctataa 18425711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 2703023 - 2702985
Alignment:
Q  227 tttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||| || |||||||||||    
T  2703023 tttaactttattttatcttttgctatataaatagcttat 2702985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 3175942 - 3175896
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||| |||||||||||||||||||| || || ||||||||    
T  3175942 gaaaacaatttgactttattttatcttttgctatagaagtagcttat 3175896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 29912939 - 29912889
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaag 270  Q
    |||||||||| |||||||||||| ||||||| || |||||||| |||||||    
T  29912939 aaaacaattttactttattttattttttgctatagaaatagctgatgtaag 29912889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 39603527 - 39603573
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatg 266  Q
    ||||||||||||| |||||||||||||||   |||||||||||||||    
T  39603527 aaaacaatttaacgttattttatcttttgacataaaaatagcttatg 39603573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 42321958 - 42322004
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||| ||||||||||||| |||| | ||||||||||||||    
T  42321958 gaaaacaatttgactttattttatcatttgttataaaaatagcttat 42322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 44138492 - 44138442
Alignment:
Q  291 tatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaa 341  Q
    ||||||||||||||| ||||||| || |||||||| || ||||||||||||    
T  44138492 tatcatgataagtgcttgtactaaaagctgcaaataagctgtttatccaaa 44138442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 44797872 - 44797830
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatg 266  Q
    ||||||||| || |||||||||||||| |||||||||||||||    
T  44797872 caatttaacgttgttttatcttttgctataaaaatagcttatg 44797830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 49803202 - 49803156
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||| ||||||||||||||| || ||||| |||||    
T  49803202 gaaaacaatttaacttcattttatcttttgctatagaaataacttat 49803156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 50662815 - 50662857
Alignment:
Q  223 acaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||| |||||||||||| |||| ||||||||||||||    
T  50662815 acaatttaacattattttatcttatgctataaaaatagcttat 50662857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 7601749 - 7601704
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||    
T  7601749 aaaacaatttaactttattttatcctttgctataggaatagcttat 7601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 23459619 - 23459578
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatag 260  Q
    |||||||| ||||||| ||||||||||||||| |||||||||    
T  23459619 gaaaacaacttaacttcattttatcttttgctataaaaatag 23459578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 27027 - 27083
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||||||||| || ||| |||||| |||||||  || |||||||||||||||    
T  27027 gcttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaaacag 27083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 19039716 - 19039660
Alignment:
Q  289 cttatcatgataagtgcctgtactataatctgcaaa-tgagttgtttatccaaacag 344  Q
    ||||||||||||| ||||| || ||||| ||||||| | ||||||||||||||||||    
T  19039716 cttatcatgataattgcctatattataagctgcaaattaagttgtttatccaaacag 19039660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 33587051 - 33587095
Alignment:
Q  237 ttttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||| ||| ||||||||||||||| ||||||||| ||||    
T  33587051 ttttatctttcgctataaaaatagcttatgcaagcttatacataa 33587095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 41088373 - 41088329
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||| |||||||||||||||||| ||| ||||||| ||||    
T  41088373 aaacaattttactttattttatcttttgttgtgaaaatagtttat 41088329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 44138552 - 44138504
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||| |||||||||||||||||||||| |||| || ||| |||||||    
T  44138552 acgaaagcaatttaactttattttatcttctgctatagaaacagcttat 44138504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 47119086 - 47119134
Alignment:
Q  295 atgataagtgcctgtactataatctgcaaatgagttgtttatccaaaca 343  Q
    ||||||||||| ||| ||||||  ||||||| |||||||||||||||||    
T  47119086 atgataagtgcttgtgctataagttgcaaataagttgtttatccaaaca 47119134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 52746920 - 52746948
Alignment:
Q  220 aaaacaatttaactttattttatcttttg 248  Q
    |||||||||||||||||||||||||||||    
T  52746920 aaaacaatttaactttattttatcttttg 52746948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 1e-67; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 220 - 418
Target Start/End: Complemental strand, 40426755 - 40426558
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||| ||||||||||||||||||| ||||| || || |||||||||| |||||||   ||||||||||||||||||||| ||| |||||| ||    
T  40426755 aaaacaatttagctttattttatcttttgctataaaa-taactcatgtaagcttgtatataagtgcatgcttatcatgataagtgcttgtgctataagct 40426657  T
Q  320 gcaaatgagttgtttatccaaacagtaactaagtatcactctccaatacatagtccttaaaattatataaaaacaattagtagatcttaatctatatga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40426656 gcaaatgagttgtttatccaaacagtaactaagtatcactctcctgtacttagtccttaaaagtatataaaaacaattagtagatcttaatctatatga 40426558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 3920925 - 3920869
Alignment:
Q  7 ctttgatcattcaaactataaatacaatggaaatatgtcatagtagctatgatgata 63  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3920925 ctttgatcattcaaactataaatacaacggaaatatgtcatagtagctatgatgata 3920869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 545
Target Start/End: Complemental strand, 40424341 - 40424263
Alignment:
Q  466 gactgggttgttcaggtgagtcttttgcttctgtttcttgtcttggtgaaagtcttgaggatttgaggtgggggtattgg 545  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | | ||||||| ||| |||||||||||||||||||    
T  40424341 gactgggttgttcaggtgagtcttt-gcttctgtttcttgtcttagagcaagtcttaaggctttgaggtgggggtattgg 40424263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 35446045 - 35445992
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagctt 273  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  35446045 aaaacaatttaactttattttatcatttgctataaaaatagcttatgtaagctt 35445992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 42500305 - 42500361
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  42500305 aaaacaatttaactttattttatcttttgatataaaaatagcttatgcaagcttata 42500361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 3735579 - 3735691
Alignment:
Q  228 ttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatga 327  Q
    |||||||||||| |||||||||| || |||||||||||||||||||||  |||| |    ||||||||||||||   | ||| |||||| ||||||||      
T  3735579 ttaactttatttcatcttttgctatagaaatagcttatgtaagcttatccataagc----gcttatcatgataatctcttgtgctataagctgcaaatag 3735674  T
Q  328 gttgtttatccaaacag 344  Q
    |||||||||||||||||    
T  3735675 gttgtttatccaaacag 3735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 7319089 - 7319209
Alignment:
Q  218 cgaaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataat 317  Q
    |||||||||||| |||||||||||| ||||||  || |||||||||||||||||||||  ||||     |||||||||||||||| || ||| ||||||     
T  7319089 cgaaaacaatttcactttattttatattttgcgttagaaatagcttatgtaagcttatgcataa----gtgcttatcatgataagcgcttgtgctataag 7319184  T
Q  318 ctgcaaatgagttgtttatccaaac 342  Q
    ||| |||| || ||||||| |||||    
T  7319185 ctgtaaataagctgtttattcaaac 7319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 11835588 - 11835505
Alignment:
Q  110 ttgatttgtttaaatttatccatttatataattctttgtgagacagtttcagagagcctgtagaaacagtttataacatgtgtc 193  Q
    |||| |||||| |||||||| |||||||||| | ||| ||||||||||| ||||||| ||||||||| |||||| |||||||||    
T  11835588 ttgacttgtttgaatttatctatttatataactgtttttgagacagtttgagagagcttgtagaaacggtttatgacatgtgtc 11835505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 13697839 - 13697962
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||| |||||||| ||||||||||||||||| ||||||||  ||||| ||| ||||  | |||||    ||||||||||||| ||| | |  ||||| ||    
T  13697839 aaaaaaatttaacattattttatcttttgctataaaaataatttatgcaagtttatgcaaaatca----cttatcatgataaatgcttatgttataagct 13697934  T
Q  320 gcaaatgagttgtttatccaaacagtaa 347  Q
    |||||| |||||||||||||||||||||    
T  13697935 gcaaataagttgtttatccaaacagtaa 13697962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 343
Target Start/End: Complemental strand, 32372614 - 32372495
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||| ||||||||||||||   |||| ||| ||||| |||||||||  |||| ||||      |||||||||||||||||| ||| |||||| ||    
T  32372614 aaaacaattcaactttattttatcaggtgctataataatagtttatgtaagtgtatacataagg----gcttatcatgataagtgcttgtgctataagct 32372519  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    |||||| |||||||||||||||||    
T  32372518 gcaaataagttgtttatccaaaca 32372495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 16458059 - 16458119
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||| || ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  16458059 aaaacaatttaagtt-attttatcttttgctataaaaatagcttatgcaagcttatatataa 16458119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 11835279 - 11835229
Alignment:
Q  208 ataactttaacgaaaacaatttaactttattttatcttttgctgtaaaaat 258  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  11835279 ataacttcaacgaaaacaatttaactttattttatcttttgttataaaaat 11835229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 24030482 - 24030601
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||| |||||||||||||||||||  ||||| ||  |||||||||||| |||||||| |    |||    |||||||||||||||| ||| |||||| ||    
T  24030482 aaaataatttaactttattttatcggttgctatagcaatagcttatgtgagcttatacacgcgcac----ttatcatgataagtgcttgtgctataagct 24030577  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    |||||| || ||||||||||||||    
T  24030578 gcaaataagctgtttatccaaaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 3932765 - 3932814
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaa 269  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  3932765 aaaacaattaaacttcattttatcttttgctataaaaatagcttatgtaa 3932814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 9107102 - 9107053
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaa 269  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  9107102 aaaataatttaactttattttatctttttctttaaaaatagcttatgtaa 9107053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 12554448 - 12554334
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaa 324  Q
    ||||||||||||||||||| ||| || ||||||||||||||| ||||||||   |||    || |||||||| ||||| |  ||| || ||| |||||||    
T  12554448 aatttaactttattttatcatttactataaaaatagcttatggaagcttatgcgtaa----atacttatcataataagcgtttgtgctttaagctgcaaa 12554353  T
Q  325 tgagttgtttatccaaaca 343  Q
    | |||||||||||||||||    
T  12554352 taagttgtttatccaaaca 12554334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 14932280 - 14932235
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  14932280 aaaacaatttaactttattttatcttttgctataaaaatagattat 14932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 340
Target Start/End: Original strand, 25461744 - 25461842
Alignment:
Q  238 tttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatc 337  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||    |||||||||| ||| ||||||  ||||| || ||||| || || |||||    
T  25461744 tttatcttttgctataaaaatagcttatgcaagcttatatataacca----cttatcatgagaagagcctgtgttataagctacaaataagctgcttatc 25461839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 37112338 - 37112383
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||    
T  37112338 aaaacaatttaactttgttttatcttttgctgtagaaatagcttat 37112383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 29925830 - 29925775
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| |||| ||||    
T  29925830 aaacaatttaacgctattttatcttttgctataaaaatagcttatgcaagcatata 29925775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 9202827 - 9202873
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||    
T  9202827 gaaaacaatttaactttattttatcttttgctacagaaatagcttat 9202873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 4014504 - 4014549
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||| |||||||||||||||||||||| || |||||||||||    
T  4014504 aaaacaatctaactttattttatcttttgctatagaaatagcttat 4014549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 10363741 - 10363696
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagctta 264  Q
    |||||||||||||||||||||||||||||| | || ||||||||||    
T  10363741 gaaaacaatttaactttattttatcttttgttatagaaatagctta 10363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 25461853 - 25461955
Alignment:
Q  238 tttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatc 337  Q
    |||||||| |||| ||||||||||||||| |||||||||||||| ||    |||||||||||||| || |||  ||||| || ||||| |  || |||||    
T  25461853 tttatcttctgctataaaaatagcttatgcaagcttatatataacca----cttatcatgataagcgcttgtgttataagctacaaataacctgcttatc 25461948  T
Q  338 caaacag 344  Q
    |||||||    
T  25461949 caaacag 25461955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 11615497 - 11615453
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||    
T  11615497 aaacaatttgactttattttatcttttgttataaaaatagcttat 11615453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 12425564 - 12425516
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||||||| || || |||||| ||||    
T  12425564 acgaaaacaatttaactttattttatcttttactatataaatagtttat 12425516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 15015840 - 15015780
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||| |||||| | ||||||||  |||||||||||||| ||||||||| ||||    
T  15015840 aaacaatttaacgttatttcaccttttgctacaaaaatagcttatgcaagcttatacataa 15015780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 330
Target Start/End: Complemental strand, 31038276 - 31038183
Alignment:
Q  233 tttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagtt 330  Q
    |||||||||||||||||  || ||| || ||||||||||||||| |||||||    |||||||||||||| || ||| |||||| | |||||| ||||    
T  31038276 tttattttatcttttgccatagaaacagattatgtaagcttatagataatca----cttatcatgataagcgcatgtgctataaaccgcaaataagtt 31038183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 344
Target Start/End: Original strand, 7706057 - 7706179
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctg 320  Q
    |||||||||||||| |  || |||||| || |||||||||||||||||||||||| |||    |  | | ||||||||||||  | ||| |||||| |||    
T  7706057 aaacaatttaacttcacattttctttttctataaaaatagcttatgtaagcttatttatgcataagtac-tatcatgataagcacttgtgctataacctg 7706155  T
Q  321 caaatgagttgtttatccaaacag 344  Q
    ||||| |||||||||| |||||||    
T  7706156 caaataagttgtttatacaaacag 7706179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 28776910 - 28776855
Alignment:
Q  289 cttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||||||||||| |   |||||| |||||||| ||||||||||||||||||    
T  28776910 cttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaaacag 28776855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 7674639 - 7674593
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||| |||||||||||||||| | || |||||||||||    
T  7674639 gaaaacaatttaaatttattttatcttttggtatagaaatagcttat 7674593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 7984914 - 7984868
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgttt 334  Q
    ||||||||||||||| || |||||||||| |||||||| ||||||||    
T  7984914 gcttatcatgataagcgcatgtactataagctgcaaataagttgttt 7984868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 343
Target Start/End: Complemental strand, 25461081 - 25460963
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||  |||||||||| ||||||||||  |||||||||||| | |||||||||||||| |     ||||||||||||||||| | | |||||| ||    
T  25461081 aaaacaatacaactttattt-atcttttgctagaaaaatagcttacgcaagcttatatataagc----tcttatcatgataagtgcttatgctataagct 25460987  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
      | || || ||||||||||||||    
T  25460986 aaatataagctgtttatccaaaca 25460963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 31047500 - 31047421
Alignment:
Q  233 tttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataa 316  Q
    |||||||||||||||||  || ||| || ||||||||||||||| |||||||    |||||||||||||| || ||| ||||||    
T  31047500 tttattttatcttttgccatagaaacagattatgtaagcttatagataatca----cttatcatgataagcgcatgtgctataa 31047421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 250
Target Start/End: Original strand, 36797168 - 36797198
Alignment:
Q  220 aaaacaatttaactttattttatcttttgct 250  Q
    |||||||||||||||||||||||||||||||    
T  36797168 aaaacaatttaactttattttatcttttgct 36797198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 40864709 - 40864671
Alignment:
Q  223 acaatttaactttattttatcttttgctgtaaaaatagc 261  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  40864709 acaatttaactttattttatcttatgctataaaaatagc 40864671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 42569057 - 42569103
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagctt 263  Q
    ||||||||||||  |||||||||||||||||||| || |||||||||    
T  42569057 acgaaaacaattagactttattttatcttttgctatagaaatagctt 42569103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 465944 - 465899
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||||   || |||||||||||    
T  465944 aaaacaatttaactttattttatcttttgtcatagaaatagcttat 465899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 3520355 - 3520302
Alignment:
Q  290 ttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaaca 343  Q
    ||||||||| |||||| ||| |||||| ||| |||| |||||||||||||||||    
T  3520355 ttatcatgacaagtgcttgtgctataagctgaaaataagttgtttatccaaaca 3520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 10639943 - 10639898
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||| || ||||||||||||||| || |||||||||||    
T  10639943 aaaacaatttaatttaattttatcttttgctatagaaatagcttat 10639898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 248
Target Start/End: Original strand, 12595819 - 12595848
Alignment:
Q  219 gaaaacaatttaactttattttatcttttg 248  Q
    ||||||||||||||||||||||||||||||    
T  12595819 gaaaacaatttaactttattttatcttttg 12595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 36227781 - 36227724
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||  |||||||||||||||| ||||||||| ||| | ||||||||| ||||    
T  36227781 caatttaacgctattttatcttttgctataaaaatagattaagcaagcttatacataa 36227724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 39594799 - 39594751
Alignment:
Q  218 cgaaaacaatttaactttattttatcttttgctgtaaaaatagcttatgt 267  Q
    ||||||||||||| |||||||||||||||| || || |||||||||||||    
T  39594799 cgaaaacaattta-ctttattttatctttttctatagaaatagcttatgt 39594751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 4855686 - 4855646
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagct 262  Q
    ||||||||||||||||||||| ||||| | |||||||||||    
T  4855686 aacaatttaactttattttattttttgttataaaaatagct 4855646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 7853647 - 7853603
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||| | || |||||| ||||    
T  7853647 aaacaatttaactttattttatcttttgttatagaaatagtttat 7853603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 12595528 - 12595576
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||| |||| | |||||||||||||||||| || |||||||||||    
T  12595528 acgaaaactatttgaatttattttatcttttgctatagaaatagcttat 12595576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 30585509 - 30585537
Alignment:
Q  220 aaaacaatttaactttattttatcttttg 248  Q
    |||||||||||||||||||||||||||||    
T  30585509 aaaacaatttaactttattttatcttttg 30585537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 31051872 - 31051824
Alignment:
Q  236 attttatcttttgctgtaaaaatagcttatgtaagcttatatataatca 284  Q
    ||||||||||||||  || ||| |||||||||||||||||| |||||||    
T  31051872 attttatcttttgccatagaaacagcttatgtaagcttatagataatca 31051824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 32703582 - 32703638
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    |||||||||||||| ||| ||| |||||| |||||||| |||||||| || ||||||    
T  32703582 gcttatcatgataaatgcttgtgctataagctgcaaataagttgtttttctaaacag 32703638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 42583142 - 42583094
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||| |||||||| | || ||||| |||||    
T  42583142 acgaaaacaatttaactttatttcatcttttgttatagaaataccttat 42583094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 30956706 - 30956825
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||    |||||||||||||||||  | ||| |||||| ||    
T  30956706 aaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataa----atgcttatcatgataagcccttgtgctataagct 30956801  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    |||||| || ||||||||||||||    
T  30956802 gcaaataagctgtttatccaaaca 30956825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 30972518 - 30972637
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||    |||||||||||||||||  | ||| |||||| ||    
T  30972518 aaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataa----atgcttatcatgataagcccttgtgctataagct 30972613  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    |||||| || ||||||||||||||    
T  30972614 gcaaataagctgtttatccaaaca 30972637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 20880466 - 20880347
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||||||||||||  ||||||| |||||| ||||||||||||||||||||||||| |||| ||    ||||| |||||||  || ||| |||||| ||    
T  20880466 aaaacaatttaacttg-ttttatcatttgctataaaaatagcttatgtaagcttatacataagca----cttattatgataaccgcttgtgctataaact 20880372  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
    |||||| |||||| |||||||||||    
T  20880371 gcaaataagttgtctatccaaacag 20880347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 46778307 - 46778413
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||| |||||| ||| |||| |    |||||||||||||||||  ||||||||||  |    
T  46778307 aaaacaatttaactttattttatctcttgctatagaaatagcttatataagctgatacataagc----gcttatcatgataagtgtttgtactataaggt 46778402  T
Q  320 gcaaatgagtt 330  Q
    |||||| ||||    
T  46778403 gcaaataagtt 46778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 35959536 - 35959655
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||| ||||||||||||||||||| ||| || || ||||||||||||| |||||||| |||| |     |||||||||||||| || |||  ||||| ||    
T  35959536 aaaataatttaactttattttatccttttctatagaaatagcttatgtgagcttatacataagc----tcttatcatgataagagcttgtgatataagct 35959631  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    |||||| || ||||||||||||||    
T  35959632 gcaaataagctgtttatccaaaca 35959655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 10704653 - 10704708
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||    
T  10704653 aaaacaatttaacatcattttatcttttgctataaaagtagcttatgtaagcttat 10704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 20170513 - 20170452
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| || ||||| ||| ||||    
T  20170513 aaaacaatttaacattattttatcttttgcagtaaaaatagcttgtgcaagctgatacataa 20170452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 34034098 - 34034041
Alignment:
Q  287 tgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    |||||||||||||||| |||||| |||||| ||| |||| ||||||||||||||||||    
T  34034098 tgcttatcatgataagcgcctgttctataagctgaaaataagttgtttatccaaacag 34034041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 584036 - 583980
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    |||||||||||||||||||||||| ||| || || ||||| ||||||||||||||||    
T  584036 aaaacaatttaactttattttatcattttctatagaaataacttatgtaagcttata 583980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 2719459 - 2719404
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    |||||||||| |||||||||||| ||||||| || ||||||||| |||||||||||    
T  2719459 aaaacaatttcactttattttatattttgctttagaaatagcttgtgtaagcttat 2719404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 3845642 - 3845762
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||| || ||||| |||||||||||  || || |||||||||||||||||||||| | || ||    ||||| |  |||||||| ||| |||| | ||    
T  3845642 aaaacatttcaacttaattttatctttctctatagaaatagcttatgtaagcttatacaaaagca----cttattacaataagtgcttgtgctatgaact 3845737  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
    |||||| ||||||||||||||||||    
T  3845738 gcaaataagttgtttatccaaacag 3845762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 24684903 - 24684958
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    ||||||||| || ||||||||||||||| || |||||||||||||||||| |||||    
T  24684903 aaaacaattaaaatttattttatctttttctataaaaatagcttatgtaaacttat 24684958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 12862327 - 12862381
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagctta 274  Q
    |||||||||||| | |||||||||||||||| ||||||||| ||||| |||||||    
T  12862327 aaaacaatttaaatctattttatcttttgctataaaaatagattatgcaagctta 12862381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 15304426 - 15304472
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||||| | || |||||||||||    
T  15304426 gaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 29520413 - 29520466
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||| |||||||||    
T  29520413 aacaatttaacgttatgttatcttttgct-taaaaatagcttatgcaagcttata 29520466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 2128331 - 2128376
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||||| | || |||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttat 2128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 44061103 - 44061148
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||| ||||||||||||||||| || |||||||||||    
T  44061103 aaaacaatttaaccttattttatcttttgctatagaaatagcttat 44061148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 47132304 - 47132247
Alignment:
Q  287 tgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||||||||||||| ||| ||||||  || |||| ||||||||||||||||||    
T  47132304 tgcttatcatgataagtgcttgtgctataaggtgaaaataagttgtttatccaaacag 47132247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 139817 - 139873
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||||||||||||||| ||||||| || ||||| |||||  |||||||||||    
T  139817 gcttatcatgataagtgcctgcactataagctccaaataagttgcgtatccaaacag 139873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 34235209 - 34235265
Alignment:
Q  287 tgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaaca 343  Q
    ||||||||||||||||  | |||||||||| || ||||| |||||||||||||||||    
T  34235209 tgcttatcatgataagcacatgtactataagctacaaataagttgtttatccaaaca 34235265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 466192 - 466137
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    ||||||||||||||||||||||  |||||||  | |||||| ||||||||||||||    
T  466192 aaaacaatttaactttattttacattttgcttaagaaatagattatgtaagcttat 466137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 5331281 - 5331223
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||| ||||||||| ||||    
T  5331281 aacaatttaacgttattttctcttttgctat-aaaatagcttatgcaagcttatacataa 5331223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 21335665 - 21335610
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    ||||||| | |||||||||||||||||| || ||||| |||||||| |||||||||    
T  21335665 aaaacaactaaactttattttatctttttctataaaattagcttatttaagcttat 21335610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 29520561 - 29520619
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||| ||||||||| ||||    
T  29520561 aacaatttaacgttattttctcttttgctat-aaaatagcttatgcaagcttatacataa 29520619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 5331429 - 5331376
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||| |||| || ||||||||| ||||||||||||||| |||||||||    
T  5331429 aacaatttaacgttatgttctcttttgct-taaaaatagcttatgcaagcttata 5331376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 10101555 - 10101601
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||||| | || ||||| |||||    
T  10101555 gaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 10212480 - 10212526
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||||| | || ||||| |||||    
T  10212480 gaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 36631131 - 36631250
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||||||| |||||| ||| || || |||||||||| |  || ||||| |||||    ||||||||||||||||  | ||| ||||  |||    
T  36631131 aaaacaatttaactttactttatcctttactatagaaatagcttaagcgagtttatacataat----tgcttatcatgataagcacttgtgctattgtct 36631226  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    | |||| ||||||| |||||||||    
T  36631227 gaaaataagttgttaatccaaaca 36631250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 37689463 - 37689509
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||| |||||||||||| ||||||||||| | ||||||||||||||    
T  37689463 gaaaataatttaactttactttatcttttgttataaaaatagcttat 37689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 42809292 - 42809246
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||| |||||||||||||| | || |||||||||||    
T  42809292 gaaaacaatttaactatattttatcttttgttatagaaatagcttat 42809246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 849652 - 849599
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagctt 273  Q
    |||||||||||||||||||||||||||| |  || ||||  |||||||||||||    
T  849652 aaaacaatttaactttattttatcttttccgatagaaatgacttatgtaagctt 849599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 1508665 - 1508779
Alignment:
Q  225 aatttaactttattttatcttttgctgt-aaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaa 323  Q
    ||||||||  |||||||||||||||| | |||||||| ||||| ||||||||| |||| |    |||||||||||||||  | ||| ||||||  |||||    
T  1508665 aatttaacaatattttatcttttgctttaaaaaatagtttatgcaagcttatacataagc----gcttatcatgataagcacttgtgctataagttgcaa 1508760  T
Q  324 atgagttgtttatccaaac 342  Q
    || || ||||| |||||||    
T  1508761 ataagctgtttttccaaac 1508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 34638041 - 34638090
Alignment:
Q  217 acgaaaacaatttaacttt-attttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||| |||||||||||| || || |||||||||||    
T  34638041 acgaaaacaatttaactttaattttatctttttctatagaaatagcttat 34638090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 37689221 - 37689167
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||  ||||||||||||||||||| || ||||||||||||| | ||||||    
T  37689221 aaaacaattt--ctttattttatcttttgctatagaaatagcttatgtgaacttata 37689167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 42808969 - 42808924
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||||| | || ||| |||||||    
T  42808969 aaaacaatttaactttattttatcttttgttatagaaacagcttat 42808924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 14145905 - 14145877
Alignment:
Q  217 acgaaaacaatttaactttattttatctt 245  Q
    |||||||||||||||||||||||||||||    
T  14145905 acgaaaacaatttaactttattttatctt 14145877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 24085457 - 24085513
Alignment:
Q  286 atgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaac 342  Q
    ||||||| |||||||||||  |||| | ||| |||||||| ||||||||||||||||    
T  24085457 atgcttaacatgataagtgtttgtattctaagctgcaaataagttgtttatccaaac 24085513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 35696250 - 35696206
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagctta 264  Q
    ||||||||||||  ||| ||||||||||||| |||||||||||||    
T  35696250 aaaacaatttaatgttagtttatcttttgctataaaaatagctta 35696206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 36189556 - 36189528
Alignment:
Q  220 aaaacaatttaactttattttatcttttg 248  Q
    |||||||||||||||||||||||||||||    
T  36189556 aaaacaatttaactttattttatcttttg 36189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 36783413 - 36783457
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagctt 263  Q
    ||||||||||| |||||||||||||||||| | || |||||||||    
T  36783413 gaaaacaattttactttattttatcttttggtatagaaatagctt 36783457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 39602291 - 39602335
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatg 266  Q
    |||||||||||||||| ||||||||| || || ||||||||||||    
T  39602291 aacaatttaactttatgttatctttttctatagaaatagcttatg 39602335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 49465751 - 49465787
Alignment:
Q  228 ttaactttattttatcttttgctgtaaaaatagctta 264  Q
    ||||||||||||||||||||| | |||||||||||||    
T  49465751 ttaactttattttatcttttgttataaaaatagctta 49465787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 49739544 - 49739512
Alignment:
Q  233 tttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||| ||||||||||||||||    
T  49739544 tttattttatcttttgatgtaaaaatagcttat 49739512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 220 - 343
Target Start/End: Complemental strand, 51688695 - 51688576
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||| |||||||||||||||| ||  | |||||||| |||||||||||||||||| ||    ||||||||||||||  | |||||||||| ||    
T  51688695 aaaacaatttatctttattttatcttttcctacataaatagctcatgtaagcttatatataaaca----cttatcatgataagcacttgtactataagct 51688600  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    |||||| |||||||||||||||||    
T  51688599 gcaaataagttgtttatccaaaca 51688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 14331779 - 14331659
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||| |||||||| ||||     |||||||||||| ||| || ||| |||||| ||    
T  14331779 aaaacaatttaactttattttatcttgttctgtagaaatagcttatgttagcttatacataa----gtgcttatcatgagaagcgcttgtgctataagct 14331684  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
     ||||| || |||||||| ||||||    
T  14331683 tcaaataagctgtttatctaaacag 14331659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 228 - 344
Target Start/End: Complemental strand, 37473381 - 37473269
Alignment:
Q  228 ttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatga 327  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||     ||||| ||||||||||  | ||| | |||| |||||||| |    
T  37473381 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa----gtgcttgtcatgataagaacttgtgcaataagctgcaaataa 37473286  T
Q  328 gttgtttatccaaacag 344  Q
    |||||||||||||||||    
T  37473285 gttgtttatccaaacag 37473269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 47432086 - 47432033
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagctt 273  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  47432086 aaaacaatttaactttattttatctttttctataaaaatagcttatgtaagctt 47432033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 228 - 343
Target Start/End: Complemental strand, 17830136 - 17830025
Alignment:
Q  228 ttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatga 327  Q
    |||||||||||||||| |||||| |||||||||||||||||| | |||| ||||     ||||||||||||||||||| |||  ||||| ||| | ||      
T  17830136 ttaactttattttatcatttgctataaaaatagcttatgtaatcgtatagataa----gtgcttatcatgataagtgcttgtgatataagctgaagatat 17830041  T
Q  328 gttgtttatccaaaca 343  Q
    ||||||||||||||||    
T  17830040 gttgtttatccaaaca 17830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 7107605 - 7107647
Alignment:
Q  233 tttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  7107605 tttattttatctattgctgtaaaaatagcttatgtaagcttat 7107647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 8852851 - 8852805
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  8852851 gaaaacaatataactttattttatcttttgttgtaaaaatagcttat 8852805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 26678892 - 26678842
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagc 271  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  26678892 aaacaatgtaactttattttatcttttgctgtaaaaatagtttatgcaagc 26678842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 27976585 - 27976524
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||||||| ||  ||| |||||| ||||||||||||||||||||||||| ||||    
T  27976585 aaaacaatttaactttgttcaatcatttgctataaaaatagcttatgtaagcttatacataa 27976524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 30582028 - 30582081
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagctt 273  Q
    ||||||| |||||||||||||||||||| || |||||||| |||||||||||||    
T  30582028 aaaacaagttaactttattttatctttttctataaaaataccttatgtaagctt 30582081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 3234105 - 3234222
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgc 321  Q
    ||||||||||| || |||||||||||||| | || |||||||||| | |||||||||||| |    ||||||||||||||| || ||| ||||||  |||    
T  3234105 aacaatttaacgttgttttatcttttgctatgaatatagcttatgcacgcttatatataagc----gcttatcatgataagcgcttgtgctataagttgc 3234200  T
Q  322 aaatgagttgtttatccaaaca 343  Q
    |||  ||||  |||||||||||    
T  3234201 aaacaagttagttatccaaaca 3234222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 473157 - 473110
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagctta 264  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  473157 acgaaaacaatttaactttattttaccttttgctgaaaaaattgctta 473110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 1510390 - 1510509
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||| ||| |||||| |||||||| | |||||||||||| || ||||||||||||||     ||||||||| |||||| || ||| ||||||  |    
T  1510390 aaaacaattgaacattattt-atcttttgttttaaaaatagcttttgcaagcttatatataa----gtgcttatcaagataagcgcttgtgctataagat 1510484  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
     ||||| || |||||||||||||||    
T  1510485 acaaataagctgtttatccaaacag 1510509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 24915131 - 24915182
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagc 271  Q
    |||||||||||||||||||||||||| |||| || |||||| ||||||||||    
T  24915131 aaaacaatttaactttattttatcttctgctatagaaatagtttatgtaagc 24915182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 221 - 341
Target Start/End: Complemental strand, 29904748 - 29904633
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctg 320  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||| | |||||||  |||| |      ||||||||||||| || || ||||||| |||    
T  29904748 aaacattttaaatttattttatcttttgctataaaaatagcttatatgagcttat-cataagc----ttttatcatgataagcgcttgaactataagctg 29904654  T
Q  321 caaatgagttgtttatccaaa 341  Q
    || || |||||||||||||||    
T  29904653 catataagttgtttatccaaa 29904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 51190851 - 51190808
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagctt 263  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  51190851 aaaacaatttaactttattttatcttttgctttacaaatagctt 51190808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 344
Target Start/End: Complemental strand, 41505679 - 41505557
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataa 316  Q
    |||||||||||||||||||| |||| | ||| || ||||||||||||||||||||  ||  |||| ||    |||||||| ||||| |  ||| ||||||    
T  41505679 acgaaaacaatttaactttaattta-cgttttctataaaaatagcttatgtaagccaatgcataagca----cttatcatcataagcgtttgtgctataa 41505585  T
Q  317 tctgcaaatgagttgtttatccaaacag 344  Q
     |||||||| || |||||||||||||||    
T  41505584 gctgcaaataagctgtttatccaaacag 41505557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 37631639 - 37631700
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||| ||| |||||||||||  || |||| ||||||||||||||||||| |||||    
T  37631639 aaaacaatttagcttcattttatctttctctataaagatagcttatgtaagcttatgtataa 37631700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 45145216 - 45145171
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||||    
T  45145216 aaaacaatttaatattattttatcttttgctataaaaatagcttat 45145171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 47498977 - 47499034
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacagt 345  Q
    |||||||||||||||  | ||| |||||| |||||||| |||||||||||||||||||    
T  47498977 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagt 47499034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 1509720 - 1509623
Alignment:
Q  242 tcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaa 341  Q
    ||||||||||||||||||| | ||| |||||||||||||| ||    ||||||||||||||||  ||| || ||| ||  |||| || ||||||||||||    
T  1509720 tcttttgctgtaaaaataggtcatgcaagcttatatataagca----cttatcatgataagtgattgtgctgtaagctaaaaataagctgtttatccaaa 1509625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 4256119 - 4256167
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||| |||||||||||||| ||||||||| |||| |||||||||||    
T  4256119 acgaaaataatttaactttattgtatcttttgttgtagaaatagcttat 4256167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 13809988 - 13809940
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgta 268  Q
    |||||||||||||||||||||||||||||||  | ||||| ||||||||    
T  13809988 aaaacaatttaactttattttatcttttgctaaagaaataacttatgta 13809940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 18556917 - 18556861
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    |||||||||||||  |||||||||||||||  ||||||||||||||  |||||||||    
T  18556917 aaaacaatttaacaatattttatcttttgcaataaaaatagcttatacaagcttata 18556861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 30581792 - 30581744
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgta 268  Q
    |||||||||||||||||||| ||| ||| || |||||||||||||||||    
T  30581792 aaaacaatttaactttatttcatcgttttctataaaaatagcttatgta 30581744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 41184730 - 41184770
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatag 260  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  41184730 aaaacaatttaacattattttatcttttgctataaaaatag 41184770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 344
Target Start/End: Original strand, 17727207 - 17727295
Alignment:
Q  252 taaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||||||||| || ||||||| ||| |    ||||||| |||||||||| ||| |||||| || || || ||||||||||||||||||    
T  17727207 taaaaatagcttatgcaaccttatatctaagc----gcttatcttgataagtgcttgtgctataagctacacataagttgtttatccaaacag 17727295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 27820475 - 27820530
Alignment:
Q  289 cttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    |||||||||||||| || | | |||||| |||||||| ||||||||||||||||||    
T  27820475 cttatcatgataagcgcttatgctataagctgcaaataagttgtttatccaaacag 27820530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 31517819 - 31517862
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagct 262  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||    
T  31517819 gaaatcaatttaactttattttatcttttgttgtagaaatagct 31517862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 34952207 - 34952160
Alignment:
Q  218 cgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||| ||| |||| || |||||||||||    
T  34952207 cgaaaacaatttaactttattttaacttctgctctagaaatagcttat 34952160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 36070242 - 36070199
Alignment:
Q  218 cgaaaacaatttaactttattttatcttttgctgtaaaaatagc 261  Q
    |||| |||||||||||||||||||||||||| | ||||||||||    
T  36070242 cgaagacaatttaactttattttatcttttgttataaaaatagc 36070199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 37769740 - 37769803
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatc 283  Q
    |||| ||||||||||||||||||| |||||| ||||||||  ||||||||  ||||| ||||||    
T  37769740 aaaataatttaactttattttatcatttgctataaaaataatttatgtaaatttatacataatc 37769803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 289227 - 289185
Alignment:
Q  223 acaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||| ||||||||||||||||||||  |||||||||||||    
T  289227 acaatttgactttattttatcttttgctacaaaaatagcttat 289185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 9572192 - 9572230
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagct 262  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  9572192 caatttaactttattttatcttttgctatagaaatagct 9572230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 15687150 - 15687196
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagctt 263  Q
    |||||||||||||||||||||||||| ||||| | || |||||||||    
T  15687150 acgaaaacaatttaactttattttatattttgttatagaaatagctt 15687196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 30043855 - 30043905
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagctta 274  Q
    ||||||||| |||||||||||||| || || ||||||||||| ||||||||    
T  30043855 caatttaacattattttatcttttcctatagaaatagcttatttaagctta 30043905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 45990137 - 45990179
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagc 261  Q
    ||||||||||| |||||||||||||||||| | ||||||||||    
T  45990137 gaaaacaattttactttattttatcttttgatataaaaatagc 45990179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 1232969 - 1233018
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttatg 266  Q
    ||||||| |||||||||||||||||| ||||| | |||||| ||||||||    
T  1232969 acgaaaataatttaactttattttatgttttgttataaaaacagcttatg 1233018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 7028282 - 7028237
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||| ||||||||||||||||||||||| || |||||| ||||    
T  7028282 aaaacaacttaactttattttatcttttgctatagaaatagtttat 7028237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 11560629 - 11560674
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||| | || ||||||||||||||| ||||||||||||||    
T  11560629 aaaacaatttgatttgattttatcttttgctataaaaatagcttat 11560674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 14385843 - 14385904
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| ||||| ||||||||||| ||||||||| || ||  |||||||| ||||    
T  14385843 aaaacaatttaacattattctatcttttgctataaaaatagtttctgccagcttatacataa 14385904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 27146316 - 27146373
Alignment:
Q  208 ataactttaacgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||  ||||||  ||||||| ||||||||||||||||||||| ||||| |||||    
T  27146316 ataacttatacgaaactaatttaaatttattttatcttttgctgtagaaataccttat 27146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 33541788 - 33541906
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||| |||||||| | ||| |||| || ||| |||||||| |||||  ||||||||| |||| |    ||||||||||||||   | ||| |||||| ||    
T  33541788 aaaagaatttaacatcattatatccttagctataaaaatatcttattcaagcttatacataagc----gcttatcatgataaacacttgtgctataaact 33541883  T
Q  320 gcaaatgagttgtttatccaaac 342  Q
    |||||| ||||||||||||||||    
T  33541884 gcaaataagttgtttatccaaac 33541906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 36151573 - 36151630
Alignment:
Q  208 ataactttaacgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||  ||||||||||||| |||||||||||||||||| | |  |||||||||||    
T  36151573 ataacttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttat 36151630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 37517274 - 37517335
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||||||||||||| ||||| | || ||||| ||||||  |||||||| ||||    
T  37517274 aaaacaatttaactttattttatattttggtatagaaataacttatgcgagcttatacataa 37517335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 38247376 - 38247324
Alignment:
Q  291 tatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||||||||| ||| |||||| |||||||| || |||||||||||||||    
T  38247376 tatcatgataagtgcttgtgctataagctgcaaat-agctgtttatccaaacag 38247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 49938714 - 49938661
Alignment:
Q  228 ttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||| |||||| |||||| || ||||||||||||| |||||||| ||||    
T  49938714 ttaactttaatttatcctttgctatagaaatagcttatgtgagcttatacataa 49938661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 1531043 - 1531003
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatag 260  Q
    ||||||||||||||||||||||| |||||||| | ||||||    
T  1531043 aaaacaatttaactttattttatattttgctgcagaaatag 1531003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 3887717 - 3887757
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||| |  |||||||||||    
T  3887717 aatttaactttattttatcttttgctattgaaatagcttat 3887757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 4549853 - 4549813
Alignment:
Q  223 acaatttaactttattttatcttttgctgtaaaaatagctt 263  Q
    |||||||||||||||||||||||||| | || |||||||||    
T  4549853 acaatttaactttattttatcttttgttatagaaatagctt 4549813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 11607723 - 11607687
Alignment:
Q  245 tttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  11607723 tttgttgtaaaaatagcttatgtaagcttacatataa 11607687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 27145812 - 27145860
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||| ||||||| |||||||||||| ||| |||| |||||||||||    
T  27145812 acgaaaataatttaaatttattttatctgttgttgtagaaatagcttat 27145860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 30191973 - 30191937
Alignment:
Q  228 ttaactttattttatcttttgctgtaaaaatagctta 264  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  30191973 ttaactttattttattttttgctataaaaatagctta 30191937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 34795508 - 34795560
Alignment:
Q  223 acaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    |||||| |||| ||||||||||||| |  |||||||||||||| |||||||||    
T  34795508 acaattaaactctattttatctttttcaataaaaatagcttatctaagcttat 34795560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 36872259 - 36872215
Alignment:
Q  220 aaaacaatttaact-ttattttatcttttgctgtaaaaatagctt 263  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||    
T  36872259 aaaacaatttaacaattattttatcttttgctataaaaatagctt 36872215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 37841991 - 37841943
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||| |||| | ||  ||||||||||    
T  37841991 acgaaaacaatttaactttattttatcatttgttataggaatagcttat 37841943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 38189731 - 38189695
Alignment:
Q  238 tttatcttttgctgtaaaaatagcttatgtaagctta 274  Q
    ||||||||||||| || ||||||||||||||||||||    
T  38189731 tttatcttttgctatagaaatagcttatgtaagctta 38189695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 43990240 - 43990180
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||||| |||||||  ||||  ||||||||| |||||| |||||||| ||||    
T  43990240 aaacaatttaactttgttttatcacttgccataaaaatagtttatgtgagcttatacataa 43990180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 46252767 - 46252803
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagc 261  Q
    |||||||||||||||||||||||| | ||||||||||    
T  46252767 aatttaactttattttatcttttgttataaaaatagc 46252803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 47498913 - 47498953
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaa 257  Q
    ||||||| |||||||||||||||||||||||| ||| ||||    
T  47498913 acgaaaataatttaactttattttatcttttgttgttaaaa 47498953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 6e-23; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 41407291 - 41407171
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||||||||||||||||||| |  | |||||||||||||||||||||| ||||     |||||||||||||||| || ||| |||||| ||    
T  41407291 aaaacaatttaactttattttatcttttggtacagaaatagcttatgtaagcttatacataa----gtgcttatcatgataagcgcttgtgctataagct 41407196  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
    |||||  || |||||||||||||||    
T  41407195 gcaaacaagctgtttatccaaacag 41407171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 220 - 338
Target Start/End: Complemental strand, 32592577 - 32592463
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||| |||||||||||||| || ||||||||| ||||| ||||||||| |||| |    |||||| ||||||||||  ||| |||||| ||    
T  32592577 aaaacaatttaacattattttatctttttctataaaaatagtttatgcaagcttatacataagc----gcttataatgataagtgtttgtgctataagct 32592482  T
Q  320 gcaaatgagttgtttatcc 338  Q
     ||||| ||||||||||||    
T  32592481 acaaataagttgtttatcc 32592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 42659231 - 42659351
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||||||| ||||||||||| | ||| |  ||||||||||||||||||||||||| |||| |    |||||||||||||||||  ||| |||| | ||    
T  42659231 aaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagc----gcttatcatgataagtgtgtgtgctattagct 42659326  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
    |||||| ||||  ||||||||||||    
T  42659327 gcaaataagtttcttatccaaacag 42659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 15757739 - 15757866
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacat---gcttatcatgataagtgcctgtactataa 316  Q
    |||||||||||||||||||||||| ||| || || | ||||||||||| |||||||| |||| |   |   ||||||||||||||| || ||| ||||||    
T  15757739 aaaacaatttaactttattttatcattttctttagatatagcttatgtgagcttatacataagcttttatcgcttatcatgataagcgcttgtgctataa 15757838  T
Q  317 tctgcaaatgagttgtttatccaaacag 344  Q
     ||| |||| || |||||||||||||||    
T  15757839 gctgaaaataagctgtttatccaaacag 15757866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 41812170 - 41812235
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcac 285  Q
    ||||||||||||||| |||||| | |||||  ||||||||||||||||||||||||| ||||||||    
T  41812170 aaaacaatttaacttcattttaccatttgccataaaaatagcttatgtaagcttatacataatcac 41812235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 12464553 - 12464673
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||||||||||||||||||||||||| ||  | ||||||||||||||||||| || |||  ||    ||||||||||||||||| ||   ||||| ||    
T  12464553 aaaacaatttaactttattttatctttttctacagaaatagcttatgtaagcttctacatatgca----cttatcatgataagtgcgtgcgttataagct 12464648  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
     ||||| ||  ||||||||||||||    
T  12464649 acaaataagccgtttatccaaacag 12464673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 41241212 - 41241267
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    ||||||||||||||| |||||||||||| || || |||||||||||||||||||||    
T  41241212 aaaacaatttaacttcattttatcttttcctatagaaatagcttatgtaagcttat 41241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 42868541 - 42868596
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    |||||||||||||||||||||||||||| || | |||||||||||||||| |||||    
T  42868541 aaaacaatttaactttattttatctttttctatgaaaatagcttatgtaaacttat 42868596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 26202015 - 26201957
Alignment:
Q  224 caatttaactttattttatct-tttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  26202015 caatttaacgttattttatctctttgctataaaaatagcttatgcaagcttatatataa 26201957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 4026807 - 4026762
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||    
T  4026807 aaaataatttaactttattttatcttttgctataaaaatagcttat 4026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 42420374 - 42420419
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  42420374 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 42420419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 15305647 - 15305591
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    |||| |||||||| |||||||||| |||||| ||||||||||||||| |||||||||    
T  15305647 aaaataatttaacattattttatcatttgctataaaaatagcttatgcaagcttata 15305591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 341
Target Start/End: Complemental strand, 41851525 - 41851408
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||||||||| |||||||| || || ||||| ||  ||||||||||||||||| |    | ||| ||||||||| || ||| |||||  ||    
T  41851525 aaaacaatttaactttattgtatcttttcctatataaatatctcgtgtaagcttatatataagc----gtttagcatgataagcgcttgtgctatatgct 41851430  T
Q  320 gcaaatgagttgtttatccaaa 341  Q
    |||||| || ||||||||||||    
T  41851429 gcaaataagatgtttatccaaa 41851408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 10619293 - 10619343
Alignment:
Q  218 cgaaaacaatttaactttattttatcttttgctgtaaaaatagcttatgta 268  Q
    |||||||||||||||||| ||||||||||| || ||||||||||| |||||    
T  10619293 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgta 10619343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 43279607 - 43279661
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagctta 274  Q
    |||||||||| || ||||||||||||||| | ||||||||||||||| |||||||    
T  43279607 aaaacaatttcacattattttatcttttgatataaaaatagcttatgcaagctta 43279661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 3312030 - 3311973
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||| ||||||||||||||  |||||||||||| |||||||||| ||||||| ||||    
T  3312030 caattcaactttattttatcccttgctgtaaaaacagcttatgtatgcttatacataa 3311973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 3932334 - 3932289
Alignment:
Q  226 atttaactttattttatcttttgctgtaaaaatagcttatgtaagc 271  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||    
T  3932334 atttaactttattttatcttttgctatagaaataacttatgtaagc 3932289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 10494658 - 10494613
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||    
T  10494658 aaaacaatttcactttattttatcatttgctgtaaaaattgcttat 10494613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 11863729 - 11863766
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaa 256  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11863729 gaaaacaatttaactctattttatcttttgctgtaaaa 11863766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 20933741 - 20933684
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||| |||| |||| ||||    
T  20933741 caatttaacattattttatcttttgttgtaaaaatagattatgcaagcctatacataa 20933684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 31561833 - 31561890
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatat 277  Q
    |||||||||||||||||||||||| |||  | || | |||||||||||||||||||||    
T  31561833 aaaacaatttaactttattttatcatttattatagatatagcttatgtaagcttatat 31561890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 45229502 - 45229441
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| | |||||||| |||||| || ||||||||||||||| |||||| ||||    
T  45229502 aaaacaatttaacctcattttatcgtttgctatagaaatagcttatgtaaacttatacataa 45229441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 2227156 - 2227088
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatg 288  Q
    |||||||||| | ||||||||||||||| |  || |||||||||||||||||| ||| |||| ||||||    
T  2227156 aaaacaattttattttattttatcttttaccatagaaatagcttatgtaagctcatacataagcacatg 2227088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 35459903 - 35459855
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||| |||||||||||||||||| | || |||||||||||    
T  35459903 acgaaaacaatttgactttattttatcttttggtatacaaatagcttat 35459855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 18962117 - 18962160
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagct 262  Q
    ||||||| |||||||||||||||||||||| | |||||||||||    
T  18962117 gaaaacagtttaactttattttatcttttgttataaaaatagct 18962160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 27695729 - 27695784
Alignment:
Q  286 atgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaa 341  Q
    |||||||||||||||||||  ||| |||||| || ||||| |||||||||||||||    
T  27695729 atgcttatcatgataagtgtttgtgctataagctacaaataagttgtttatccaaa 27695784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 43570352 - 43570297
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaaca 343  Q
    |||||||||||||||||| ||| |||||| |||||||| || |||||| |||||||    
T  43570352 gcttatcatgataagtgcttgtgctataagctgcaaataagctgtttacccaaaca 43570297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 5998789 - 5998827
Alignment:
Q  227 tttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  5998789 tttaactttattttatcttttgttataaaaatagcttat 5998827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 7825243 - 7825197
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||| |||||||||||| ||||||||||| | ||||||||||||||    
T  7825243 gaaaaaaatttaactttactttatcttttgttataaaaatagcttat 7825197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 13325563 - 13325513
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttatgt 267  Q
    ||||||| ||||||||||||||||||| ||| || ||||| ||||||||||    
T  13325563 acgaaaataatttaactttattttatcattttctataaaactagcttatgt 13325513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 36114409 - 36114367
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagct 262  Q
    |||||||||||||||||||||||||||||   |||||||||||    
T  36114409 aaaacaatttaactttattttatcttttgtcataaaaatagct 36114367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 3611216 - 3611171
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||| |||||||| || ||||| |||||    
T  3611216 aaaacaatttaactttattttaccttttgctatagaaataacttat 3611171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 9195358 - 9195403
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||| ||||||||||||||||||||| || ||||| |||||    
T  9195358 aaaacaattaaactttattttatcttttgctttataaataacttat 9195403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 26143777 - 26143830
Alignment:
Q  291 tatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||| ||||||| |||  ||||| |||||||| ||||||||||||||||||    
T  26143777 tatcatggtaagtgcttgtgttataaactgcaaataagttgtttatccaaacag 26143830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 42457938 - 42457893
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||| || || |||||| ||||    
T  42457938 aaaacaatttaactttattttatcttttactatagaaatagattat 42457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 42907353 - 42907304
Alignment:
Q  216 aacgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||| |||| || | || |||||||||||    
T  42907353 aacgaaaacaatttaactttattttttcttctgttatagaaatagcttat 42907304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 2195946 - 2195906
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||| |||||||||||| || ||||||||||||||    
T  2195946 aatttaacttcattttatctttttctataaaaatagcttat 2195906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 18066119 - 18066075
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagctt 263  Q
    ||||||||||||||||||||| || |||| ||||| |||||||||    
T  18066119 gaaaacaatttaactttatttcatattttactgtagaaatagctt 18066075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 22971606 - 22971653
Alignment:
Q  228 ttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    |||||||||||||||||||| || || ||||||||||| ||||||||||    
T  22971606 ttaactttattttatctttt-ctatagaaatagcttatataagcttata 22971653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 23747297 - 23747249
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||| ||||||| || ||||||||||||| | ||||||||||||||    
T  23747297 acgaaaataatttaaattcattttatcttttgatataaaaatagcttat 23747249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 26143726 - 26143766
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||| ||||||||||||||||||||| || |||||||||||    
T  26143726 aattgaactttattttatcttttgctatagaaatagcttat 26143766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 33981087 - 33981031
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    |||||||||||||||||| ||| |||||| ||| ||||||| |||||| | ||||||    
T  33981087 gcttatcatgataagtgcttgtgctataagctgaaaatgaggtgtttaccgaaacag 33981031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 36114603 - 36114631
Alignment:
Q  220 aaaacaatttaactttattttatcttttg 248  Q
    |||||||||||||||||||||||||||||    
T  36114603 aaaacaatttaactttattttatcttttg 36114631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 39073769 - 39073825
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||||| ||||||||||||||  |||||||||  |||||| || ||||||    
T  39073769 aaaacaatttaacgttattttatcttttaatgtaaaaatgtcttatgcaaacttata 39073825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 39567892 - 39567848
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||| | || ||||| |||||    
T  39567892 aaacaatttaactttattttatcttttgttatagaaatatcttat 39567848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 43199399 - 43199359
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||| |||| ||||| |||||    
T  43199399 aatttaactttattttatcttttgttgtagaaataacttat 43199359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 12497311 - 12497435
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacat-gcttatcatgataagtgcctgtactataatc 318  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||| | | | ||||||| ||||||  || ||  |||||| |    
T  12497311 aaaacaagttaactttattttatcttttgctataaaaatggcttatgcaagcttatacataacctcttagcttatcttgataaacgcgtgctctataagc 12497410  T
Q  319 tgcaaatgagttgtttatccaaaca 343  Q
    ||||||| |||||||| ||||||||    
T  12497411 tgcaaataagttgtttgtccaaaca 12497435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 14956375 - 14956494
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||  |||||| ||||||| |  ||||||||||||||| ||||||||| ||||     |||||||||||||||| |  ||| |||||| ||    
T  14956375 aaaacaatttaatgttatttcatcttttacaataaaaatagcttatgcaagcttatacataag----tgcttatcatgataagcgattgtgctataagct 14956470  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
    |||||| |||||||||||||||||    
T  14956471 gcaaataagttgtttatccaaaca 14956494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 12976198 - 12976086
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaa 324  Q
    |||||||||||||||||| ||||||| || ||||||||||||| |||||||| |||| |    |||||||||||| ||||||||| ||   | |||||||    
T  12976198 aatttaactttattttatattttgctatagaaatagcttatgtgagcttatacataagc----gcttatcatgatgagtgcctgtgct---agctgcaaa 12976106  T
Q  325 tgagttgtttatccaaacag 344  Q
    | || |||||||||||||||    
T  12976105 taagctgtttatccaaacag 12976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 1058162 - 1058274
Alignment:
Q  228 ttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatga 327  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||| |||| |    |||||||||  |||| || ||| |||||| |||||||| |    
T  1058162 ttaactttattttatgatttgctataaaaatagcttatgtaagcttatacataagc----gcttatcatagtaagcgcttgtgctataagctgcaaataa 1058257  T
Q  328 gttgtttatccaaacag 344  Q
    | ||||||| |||||||    
T  1058258 gctgtttattcaaacag 1058274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 343
Target Start/End: Complemental strand, 38750348 - 38750229
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||| |||||| ||||||| ||| |  || ||||||||||||||| ||||||||| |||| |    |||||||||||||||||| ||||||  || ||    
T  38750348 aaaacattttaacattattttttctctgcctataaaaatagcttatgcaagcttatacataagc----gcttatcatgataagtgcatgtacttcaagct 38750253  T
Q  320 gcaaatgagttgtttatccaaaca 343  Q
     ||||| |||||||||||||||||    
T  38750252 tcaaataagttgtttatccaaaca 38750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 344
Target Start/End: Complemental strand, 32976036 - 32975930
Alignment:
Q  234 ttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtt 333  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| ||    |||||||| |||| ||| ||| || ||| ||| |||| | |||||    
T  32976036 ttattttatcttttgctataaaaatagcttatgcaagcttatatataagca----cttatcataataactgcttgtgctctaagctgaaaatcacttgtt 32975941  T
Q  334 tatccaaacag 344  Q
    |||| ||||||    
T  32975940 tatctaaacag 32975930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 35534691 - 35534809
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||||||  |||       |||||| |||||||  |||||| |||||| ||    
T  35534691 aaaacaatttaactttattttatctttt-ctataaaaatatcttatgtaagcttatgcata-----gcgcttataatgataaacgcctgtgctataagct 35534784  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
    |||||| || ||||| |||||||||    
T  35534785 gcaaataagctgtttttccaaacag 35534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 42043425 - 42043486
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||||  ||||||||||||||| || ||||||| |||||||||||||| ||||    
T  42043425 aaaacaatttaactgcattttatcttttgctatagaaatagcatatgtaagcttatacataa 42043486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 10758336 - 10758417
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgc 305  Q
    |||||||||||||||||||||||  |||||| || |||||| ||| || |||||||| |||||||    |||||||||||||||||    
T  10758336 aaaacaatttaactttattttatgatttgctatagaaatagtttacgtgagcttatacataatca----cttatcatgataagtgc 10758417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 41475137 - 41475185
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||||||    
T  41475137 acgaaaacaatttaactgtattttatcttttgctataaaattagcttat 41475185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 3537108 - 3537156
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||| |||||||||||||||||||| || |||| ||||||    
T  3537108 acgaaaacaatttgactttattttatcttttgctatagaaattgcttat 3537156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 29168145 - 29168193
Alignment:
Q  233 tttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||||||||| || ||||||||||||| |||||||| ||||    
T  29168145 tttattttatcttttgctatagaaatagcttatgtgagcttatacataa 29168193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 40280284 - 40280330
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||| |||||||||||||||||| |||| ||||| |||||    
T  40280284 gaaaacaattttactttattttatcttttgttgtagaaataacttat 40280330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 42237501 - 42237539
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaa 257  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  42237501 gaaaacaatttaactttattttatcttttgttataaaaa 42237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 42597392 - 42597346
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||| |||||||||||||||||| | || |||||||||||    
T  42597392 gaaaacaattttactttattttatcttttgttatagaaatagcttat 42597346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 4526338 - 4526392
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||||||||||||||  ||||||| || |||||| |||||||||| ||||    
T  4526338 aaaacaatttaactttatttta--ttttgctatagaaatagtttatgtaagcctata 4526392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 9956949 - 9956998
Alignment:
Q  291 tatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaa 340  Q
    ||||||||||||||| ||| |||||| || ||||| ||||||||||||||    
T  9956949 tatcatgataagtgcttgtgctataagctacaaataagttgtttatccaa 9956998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 16825617 - 16825678
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| |||||||||| ||| || ||| ||||||||||| ||| ||||| ||||    
T  16825617 aaaacaatttaacattattttatcctttactataagaatagcttatgcaaggttatacataa 16825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 25930634 - 25930695
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||| ||||| ||||||| ||| ||| || || |||||||||||||||||||||| ||||    
T  25930634 aaaacattttaattttatttcatcctttcctatagaaatagcttatgtaagcttatacataa 25930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 31716314 - 31716351
Alignment:
Q  223 acaatttaactttattttatcttttgctgtaaaaatag 260  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  31716314 acaatttaactttattttatcatttgctgttaaaatag 31716351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 35374452 - 35374493
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatag 260  Q
    |||||||||||||||||||||||||||| ||| || ||||||    
T  35374452 gaaaacaatttaactttattttatctttcgctatagaaatag 35374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 40981057 - 40981000
Alignment:
Q  287 tgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||| |||||| || ||| |||||| |||||||| || |||||||||||||||    
T  40981057 tgcttatcaagataagcgcttgtgctataagctgcaaataagctgtttatccaaacag 40981000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 2364558 - 2364594
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagc 261  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  2364558 aatttgactttattttatcttttgctataaaaatagc 2364594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 245
Target Start/End: Original strand, 2595074 - 2595102
Alignment:
Q  217 acgaaaacaatttaactttattttatctt 245  Q
    |||||||||||||||||||||||||||||    
T  2595074 acgaaaacaatttaactttattttatctt 2595102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 26215489 - 26215441
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||| | |||||||||||||||||||||| | || |||||||||||    
T  26215489 acgaaaatagtttaactttattttatcttttgttatagaaatagcttat 26215441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 26370967 - 26370935
Alignment:
Q  231 actttattttatcttttgctgtaaaaatagctt 263  Q
    |||||||||||||||||| ||||||||||||||    
T  26370967 actttattttatcttttgttgtaaaaatagctt 26370935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 35644058 - 35644122
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||||||  || ||||||||||||   |||||||||||| | ||||||||| ||||    
T  35644058 acgaaaacaatttaacggtaatttatcttttgccagaaaaatagcttaagcaagcttatacataa 35644122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 37444492 - 37444540
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||| ||||||||||| | ||  ||||||||||    
T  37444492 acgaaaacaatttaactttactttatcttttgttatagtaatagcttat 37444540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 38353330 - 38353279
Alignment:
Q  229 taactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||| ||||||||||||||||  ||||||||||||||| ||||||||| ||||    
T  38353330 taacattattttatcttttgca-taaaaatagcttatgcaagcttatacataa 38353279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 223 - 344
Target Start/End: Complemental strand, 45004753 - 45004636
Alignment:
Q  223 acaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgca 322  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| ||||    |||||  |||| | ||||||| |||| ||| ||| |||||| |||||    
T  45004753 acaatttaactttattttatcttttgctataaaaatagtttatgcaagc----atataggcacacgtttatcataataattgcttgtgctataaactgca 45004658  T
Q  323 aatgagttgtttatccaaacag 344  Q
    ||| |||| |||||||||||||    
T  45004657 aataagttatttatccaaacag 45004636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 45806408 - 45806466
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatata 280  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  45806408 aacaatttaacgttattttatcttttgctataaaaatagcttatgcaagcttatatata 45806466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 119899 - 119845
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||    
T  119899 aaacaatttaactttattttatcttttcctgtagaaatagcttatgtaaggttat 119845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 46078137 - 46078076
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||||||| ||||||||||| || |||||||| |||||||||||||||| ||||    
T  46078137 aaaacaatttaactttgttttatctttttctataaaaataacttatgtaagcttatacataa 46078076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 21568707 - 21568828
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatc 318  Q
    |||||||| ||||| | ||| ||||||||||| ||||||||||||||| ||||||||| ||||     ||||||||||||||||  | | | |||||| |    
T  21568707 gaaaacaagttaacatcattctatcttttgctataaaaatagcttatgcaagcttatacataa----gtgcttatcatgataagcacttatgctataagc 21568802  T
Q  319 tgcaaatgagttgtttatccaaacag 344  Q
    ||||||  || |||||||||||||||    
T  21568803 tgcaaacaagctgtttatccaaacag 21568828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 48470034 - 48469978
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| | |||||||    
T  48470034 aaaacaatttaacttaattttatcttttgctgtagaaatagcttatgaaggcttata 48469978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 324
Target Start/End: Original strand, 45806557 - 45806657
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||| ||||||| ||||||||| |||| |||||||||| ||||||||| ||||     ||||||| ||||||||||| | | |||||| ||    
T  45806557 aaaacaatttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataa----gtgcttattatgataagtgcttttgctataagct 45806652  T
Q  320 gcaaa 324  Q
    |||||    
T  45806653 gcaaa 45806657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 33128742 - 33128627
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaa 324  Q
    |||||||||||||||||||| || || |||||||| | || ||||||||||  |||| ||    ||||||||||||||||  ||| || ||| |||||||    
T  33128742 aatttaactttattttatctctttctataaaaataacgtaagtaagcttatgcataagca----cttatcatgataagtgtttgtgctgtaagctgcaaa 33128647  T
Q  325 tgagttgtttatccaaacag 344  Q
    | || |||||||||||||||    
T  33128646 taagctgtttatccaaacag 33128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 420350 - 420289
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||| ||| ||||||||||||||||| |||| |||||||||| ||||||||| ||||    
T  420350 aaaacaattgaacattattttatcttttgctataaacatagcttatgcaagcttatacataa 420289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 344
Target Start/End: Original strand, 23989578 - 23989684
Alignment:
Q  234 ttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtt 333  Q
    |||||||||||||| || ||||||||| ||||| || |||||| ||||  ||    ||||||||||||| || |||||||||| |||||||| |||||||    
T  23989578 ttattttatcttttactataaaaatagtttatgcaaacttatacataagaac----ttatcatgataagcgcgtgtactataagctgcaaataagttgtt 23989673  T
Q  334 tatccaaacag 344  Q
      |||||||||    
T  23989674 actccaaacag 23989684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 4970881 - 4970929
Alignment:
Q  233 tttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||||    
T  4970881 tttattttatcttttgctatagaaatagcttatgtaagcttatacataa 4970929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 30134042 - 30133994
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||||    
T  30134042 acgaaaacaagttgactttattttatcttttgttgtaaaaatagcttat 30133994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 45264085 - 45264028
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgt--aaaaatagcttatgtaagcttat 275  Q
    |||||||||||||||||||| ||||||| || |  |||||||||||||||||||||||    
T  45264085 aaaacaatttaactttatttcatctttttctataaaaaaatagcttatgtaagcttat 45264028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 19302639 - 19302700
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| ||| | |||||| |||||||||||||||||||| || | |||||||||    
T  19302639 aaaacaatttaacgttactatatcttctgctgtaaaaatagcttatgcaaacatatatataa 19302700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 28613614 - 28613659
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||    
T  28613614 aaaacaatttaactttgttttatcttttgttataaaaatagcttat 28613659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 30180044 - 30180011
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgct 250  Q
    ||||||||||||||||||||||||||||||||||    
T  30180044 acgaaaacaatttaactttattttatcttttgct 30180011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 33266568 - 33266625
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||||||||||| |||||| || ||||||||| ||| |||||||| ||||    
T  33266568 caatttaactttattttatcctttgctatataaatagcttttgtgagcttatacataa 33266625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 43152982 - 43153027
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||||| | || |||||||||||    
T  43152982 aaaacaatttaactttattttatcttttgttatagaaatagcttat 43153027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 343
Target Start/End: Original strand, 18865132 - 18865249
Alignment:
Q  222 aacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgc 321  Q
    ||||| |||| ||||  |||||||||||| |   |||| ||||||||| |||||| |||| |||    ||||||||||||| |  ||| |||||| ||||    
T  18865132 aacaacttaattttacattatcttttgctatcttaataacttatgtaaacttataaataaacac----ttatcatgataagcgtttgtgctataagctgc 18865227  T
Q  322 aaatgagttgtttatccaaaca 343  Q
    |||| |||||||||||||||||    
T  18865228 aaataagttgtttatccaaaca 18865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 30571011 - 30571067
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    |||| ||||||||||||||||| |||| ||| || || |||||||||||||||||||    
T  30571011 aaaataatttaactttattttacctttcgctatataagtagcttatgtaagcttata 30571067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 31247612 - 31247664
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    ||||||| | |||||| |||||||||| ||||||||||||||| |||||||||    
T  31247612 caatttatcgttatttcatcttttgctataaaaatagcttatgcaagcttata 31247664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 39279951 - 39279892
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||||| ||||||||||||||  || ||||||| |||||||||||||| ||||    
T  39279951 aaacaatttaacttaattttatcttttgcaatagaaatagc-tatgtaagcttatacataa 39279892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 20258502 - 20258463
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaata 259  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  20258502 aaaacaatttaacattattttatcttttgctataaaaata 20258463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 20269566 - 20269527
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaata 259  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  20269566 aaaacaatttaactttgttttatcttttgctataaaaata 20269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 276
Target Start/End: Original strand, 31247666 - 31247705
Alignment:
Q  237 ttttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  31247666 ttttatcttttgctataaaaatagcttatgcaagcttata 31247705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 37832213 - 37832264
Alignment:
Q  214 ttaacgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||| |||||||||||||| ||||||| || |||||| ||||    
T  37832213 ttaacgaaaacaatctaactttattttatattttgctatagaaatagtttat 37832264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 46139877 - 46139822
Alignment:
Q  289 cttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||||||||||| |||  ||||| |||||||| ||||||||| ||||||||    
T  46139877 cttatcatgataagtgcttgtgttataagctgcaaataagttgtttaaccaaacag 46139822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 47177572 - 47177517
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaaca 343  Q
    ||||||||| |||||||| | | |||||||| |||||| |||||||||||||||||    
T  47177572 gcttatcatcataagtgcttatgctataatcagcaaataagttgtttatccaaaca 47177517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 281
Target Start/End: Complemental strand, 48140192 - 48140145
Alignment:
Q  234 ttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||||| | ||||||||||||||| ||||||||| ||||    
T  48140192 ttattttatcttttgttataaaaatagcttatgcaagcttatacataa 48140145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 11619340 - 11619386
Alignment:
Q  298 ataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    |||||||| ||| | ||||||||||||| ||||||||||||||||||    
T  11619340 ataagtgcttgtgcaataatctgcaaataagttgtttatccaaacag 11619386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 12835016 - 12835058
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagc 261  Q
    ||||||||||| |||||||||||||||||| |||| |||||||    
T  12835016 gaaaacaatttgactttattttatcttttgttgtagaaatagc 12835058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 34083606 - 34083644
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaata 259  Q
    |||||||||||||||||||||||||||||| || |||||    
T  34083606 aaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 40689065 - 40689107
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagc 261  Q
    ||||| |||||||||||||||||||||||||| || |||||||    
T  40689065 gaaaataatttaactttattttatcttttgctatagaaatagc 40689107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 21619344 - 21619295
Alignment:
Q  287 tgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttat 336  Q
    ||||||||||||||||||| ||| |||||| |||||||| || |||||||    
T  21619344 tgcttatcatgataagtgcttgtgctataagctgcaaattagatgtttat 21619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 26935629 - 26935674
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagctta 264  Q
    |||||||||||||| |||||||||| |||| | |||||||||||||    
T  26935629 gaaaacaatttaaccttattttatcatttgttataaaaatagctta 26935674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 39279749 - 39279704
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaa 269  Q
    |||||||||||| |||||||||||||| || ||| |||||||||||    
T  39279749 caatttaactttgttttatcttttgctatagaaacagcttatgtaa 39279704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 39967913 - 39967880
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgct 250  Q
    ||||||||||||||| ||||||||||||||||||    
T  39967913 acgaaaacaatttaagtttattttatcttttgct 39967880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 40009460 - 40009415
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||| ||||||| | |||||| |||||||    
T  40009460 aaaacaatttaactttattttgtcttttgttataaaaacagcttat 40009415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 44216861 - 44216906
Alignment:
Q  226 atttaactttattttatcttttgctgtaaaaatagcttatgtaagc 271  Q
    ||||||||||||||||||||||||| || ||| | |||||||||||    
T  44216861 atttaactttattttatcttttgctatagaaagaacttatgtaagc 44216906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 6630583 - 6630551
Alignment:
Q  227 tttaactttattttatcttttgctgtaaaaata 259  Q
    |||||||||||||||||||||| ||||||||||    
T  6630583 tttaactttattttatcttttgttgtaaaaata 6630551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 20234473 - 20234410
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaa--tagcttatgtaagcttatatataa 281  Q
    |||||||||||| | |||||||||||||||| ||||||  ||||||||| | ||||||| ||||    
T  20234473 aaaacaatttaattatattttatcttttgctataaaaatttagcttatgcatgcttatacataa 20234410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 20526431 - 20526375
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||||||||||||||||||||||| || || |||| || ||||| ||||| ||||    
T  20526431 aatttaactttattttatcttttgctatataagtagcataggtaagtttatacataa 20526375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 33552955 - 33553007
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaa 340  Q
    |||||||||| ||||||| ||| | |||| |||||||| ||||||||||||||    
T  33552955 gcttatcatggtaagtgcttgtgcaataagctgcaaataagttgtttatccaa 33553007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 38500062 - 38500118
Alignment:
Q  288 gcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatccaaacag 344  Q
    ||||||||||||||| || ||| |||||| |||||||| || |||||||| ||||||    
T  38500062 gcttatcatgataagcgcttgtgctataaactgcaaataagctgtttatctaaacag 38500118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 30536638 - 30536699
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||||| ||||||||| ||||    
T  30536638 aaaacaatttaacgttatcttatcttttgctataaaaatagcttatgcaagcttatacataa 30536699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 8147692 - 8147644
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgta 268  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  8147692 aaaacaattcaactttattttatcttttgctataaaaatagcttatgta 8147644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 325
Target Start/End: Complemental strand, 18076186 - 18076085
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    ||||||||||||| ||||||| ||||||||| |||||||| |||||| ||||||||| ||||     ||||||| |||||||| || ||| |||||| ||    
T  18076186 aaaacaatttaaccttattttctcttttgctataaaaataacttatgcaagcttatacataa----gtgcttattatgataagcgcttgtgctataagct 18076091  T
Q  320 gcaaat 325  Q
    ||||||    
T  18076090 gcaaat 18076085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 35070710 - 35070766
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttata 276  Q
    |||||||||| | ||||||||||||||| || |||||||||||||||||||||||||    
T  35070710 aaaacaattttattttattttatctttttctataaaaatagcttatgtaagcttata 35070766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 24626285 - 24626165
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatct 319  Q
    |||||||||||||||| ||||||| ||| || || |||||||||||||||||||||| |||| ||     | |||||||||||    ||| |||||| ||    
T  24626285 aaaacaatttaactttgttttatcctttcctatagaaatagcttatgtaagcttatacataagca----atcatcatgataagcatttgtgctataagct 24626190  T
Q  320 gcaaatgagttgtttatccaaacag 344  Q
    | |||| ||||||||||||||||||    
T  24626189 gtaaataagttgtttatccaaacag 24626165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 264364 - 264316
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||| ||||||||||||||||||||||||| || |||||||||||    
T  264364 acgaaaacgatttaactttattttatcttttgctttagaaatagcttat 264316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 9093633 - 9093681
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||||||| | || |||||||||||    
T  9093633 acgaaaacaatttaactttattttatcttttgatatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 4163164 - 4163118
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgt 267  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  4163164 aaacaatttaactttattttatctatttctataaaaatagcttatgt 4163118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 4224785 - 4224739
Alignment:
Q  221 aaacaatttaactttattttatcttttgctgtaaaaatagcttatgt 267  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  4224785 aaacaatttaactttattttatctatttctataaaaatagcttatgt 4224739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 10728623 - 10728577
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||    
T  10728623 gaaaacaatttaactttattttatcttttgctttagaaataacttat 10728577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 29274308 - 29274354
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||    
T  29274308 gaaaacaatttgactttattttatcttttgctatagaaatagcttat 29274354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 6016455 - 6016516
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||| ||||||||||||||||||| | | |||||| |||||| ||| ||||||||||    
T  6016455 aaaacaattgaactttattttatcttttgttatgaaaataacttatgcaagattatatataa 6016516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 6909952 - 6910034
Alignment:
Q  220 aaaacaatttaacttta-ttttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgc 305  Q
    ||||||||||||||||| |||| |||||| || || |||||||||||||||| ||||| |||| ||    |||||||||||||||||    
T  6909952 aaaacaatttaactttatttttttcttttcctatagaaatagcttatgtaagtttatacataagca----cttatcatgataagtgc 6910034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 30536468 - 30536407
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    ||||||||||||| |||||||||| |||||| ||| ||||||||||| || |||||| ||||    
T  30536468 aaaacaatttaacattattttatcatttgctataataatagcttatgcaaacttatacataa 30536407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 6538488 - 6538387
Alignment:
Q  239 ttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatcc 338  Q
    ||||||||||||  |||| || |||||| ||||||||| |||| |    ||||||||| |||||||| ||| |||||| |||||||| || | |||||||    
T  6538488 ttatcttttgctaaaaaactaacttatgcaagcttatacataagc----gcttatcattataagtgcttgtgctataagctgcaaataagctatttatcc 6538393  T
Q  339 aaacag 344  Q
    ||||||    
T  6538392 aaacag 6538387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 9559618 - 9559666
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||| |||||||||||||||||| || ||||| |||||    
T  9559618 acgaaaacaatttaaatttattttatcttttgctatagaaataacttat 9559666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 20671942 - 20671990
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||| |||||||||||||||||| | || |||||||||||    
T  20671942 acgaaaacaatttgactttattttatcttttgatctagaaatagcttat 20671990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 31623546 - 31623495
Alignment:
Q  224 caatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttat 275  Q
    ||||||||| | |||||||||||| || ||||||||||| ||||||||||||    
T  31623546 caatttaacgtcattttatctttttctataaaaatagctaatgtaagcttat 31623495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 11363447 - 11363493
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||| |||||||||||||||||||||||  | ||||||||||||||    
T  11363447 gaaaataatttaactttattttatcttttcttttaaaaatagcttat 11363493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 30926510 - 30926410
Alignment:
Q  238 tttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaatgagttgtttatc 337  Q
    |||||||||| || || ||||||||||||||||||||||  ||||    ||||||||||||||||  | ||| |||||| |||| ||  |||||||||||    
T  30926510 tttatcttttactatagaaatagcttatgtaagcttatacttaat----tgcttatcatgataagcccttgtgctataagctgccaa--agttgtttatc 30926417  T
Q  338 caaacag 344  Q
     ||||||    
T  30926416 taaacag 30926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 33117532 - 33117486
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatg 266  Q
    ||||||||||||||| ||||||| ||||||| ||||| |||||||||    
T  33117532 aaaacaatttaacttaattttatattttgctataaaagtagcttatg 33117486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 837296 - 837341
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||| | ||||||||||| | |||||||||||||||    
T  837296 aaaacaatttaactctgttttatcttttacagtaaaaatagcttat 837341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 3785777 - 3785810
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgct 250  Q
    ||||||||| ||||||||||||||||||||||||    
T  3785777 acgaaaacagtttaactttattttatcttttgct 3785810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 3785871 - 3785904
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgct 250  Q
    ||||||||| ||||||||||||||||||||||||    
T  3785871 acgaaaacagtttaactttattttatcttttgct 3785904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 18129803 - 18129848
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagctta 264  Q
    ||||||||| |||||||||||||||||||  |||| ||||||||||    
T  18129803 gaaaacaatctaactttattttatcttttattgtagaaatagctta 18129848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 18690484 - 18690423
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 281  Q
    |||||| ||||| ||||||||||| |||||| ||||| || ||||||||| |||||| ||||    
T  18690484 aaaacagtttaaatttattttatcctttgctataaaagtaccttatgtaaccttatacataa 18690423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 28621190 - 28621227
Alignment:
Q  220 aaaacaatttaactttattttatcttttgctgtaaaaa 257  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  28621190 aaaacaatttaactttattttatcttttgttataaaaa 28621227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 8349744 - 8349772
Alignment:
Q  220 aaaacaatttaactttattttatcttttg 248  Q
    |||||||||||||||||||||||||||||    
T  8349744 aaaacaatttaactttattttatcttttg 8349772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 24836276 - 24836324
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||| |||||||||||||||||| | || ||||| |||||    
T  24836276 acgaaaacaatttgactttattttatcttttgttatagaaataacttat 24836324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 31624251 - 31624203
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||  ||||||||||||||| | || |||||||||||    
T  31624251 acgaaaacaatttaaacttattttatcttttgttatagaaatagcttat 31624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 21355 - 21403
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  21355 acgaaaacaatttaactttattttatcttttcctataaaaatagcttat 21403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 58930 - 58883
Alignment:
Q  217 acgaaaacaatttaactttattttatcttttgctgtaaaaatagctta 264  Q
    ||||||||||||||||||||||||| ||||| || |||||||||||||    
T  58930 acgaaaacaatttaactttattttaacttttcctataaaaatagctta 58883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 158092 - 157977
Alignment:
Q  225 aatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataatctgcaaa 324  Q
    |||||||||||| ||||| |||| || ||||||||||||||||||||| ||  |||| ||     ||||||| |||||||  ||| |||||| |||||||    
T  158092 aatttaactttaatttatgtttttctataaaaatagcttatgtaagctaatgcataagca----attatcatcataagtgtttgtgctataagctgcaaa 157997  T
Q  325 tgagttgtttatccaaacag 344  Q
    | || |||||||||||||||    
T  157996 taagctgtttatccaaacag 157977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 1060 - 1139
Alignment:
Q  233 tttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcctgtactataa 316  Q
    |||||||||||||||||  || ||| || ||||||||||||||| |||||||    |||||||||||||| || ||| ||||||    
T  1060 tttattttatcttttgccatagaaacagattatgtaagcttatagataatca----cttatcatgataagcgcatgtgctataa 1139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 51559 - 51513
Alignment:
Q  219 gaaaacaatttaactttattttatcttttgctgtaaaaatagcttat 265  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||||    
T  51559 gaaaacaatttaactttattttatattttgttataaaaataacttat 51513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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