View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1369_low_74 (Length: 251)
Name: NF1369_low_74
Description: NF1369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1369_low_74 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 15150980 - 15150735
Alignment:
| Q |
1 |
atgtaactccaccacctccgcttgccccaaagagttgttaatggatcaagaggattatgatgcactcaatcaaa------aaataaataagggagtgatt |
94 |
Q |
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| T |
15150980 |
atgtaactccaccacctccgcttgccccaaagagttgttaatggatcaagaggattatgatgcactcaatcaaacacaaaaaataaataagggagtgatt |
15150881 |
T |
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| Q |
95 |
aagattaaaatattgcaataacaaataacagaaagtgaaaaccacaaagaagttaacattttatgaaacaaaagtaagatataataattagtgaaaaata |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
15150880 |
aagattaaaatattgcaataacaaataacagaaagtgaaaactacaaagaagttaacagtttatgaaacaaaagtaagatataataattagtgaaaaata |
15150781 |
T |
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| Q |
195 |
taggtggcttcattacttgctgaataagttttcaacctctgttcat |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15150780 |
taggtggcttcattacttgctgaataagttttcaacctctgttcat |
15150735 |
T |
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