View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1370-INSERTION-5 (Length: 233)

Name: NF1370-INSERTION-5
Description: NF1370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1370-INSERTION-5
NF1370-INSERTION-5
[»] chr8 (16 HSPs)
chr8 (82-231)||(15073207-15073356)
chr8 (8-54)||(34101648-34101694)
chr8 (8-54)||(10467204-10467250)
chr8 (12-54)||(29672242-29672284)
chr8 (8-54)||(34063268-34063314)
chr8 (8-54)||(38047486-38047532)
chr8 (8-54)||(41709917-41709963)
chr8 (8-52)||(4052620-4052664)
chr8 (11-54)||(7394733-7394776)
chr8 (8-54)||(12753244-12753290)
chr8 (8-54)||(31513502-31513548)
chr8 (8-54)||(31732190-31732236)
chr8 (8-54)||(32019920-32019966)
chr8 (8-54)||(37664202-37664248)
chr8 (8-54)||(40389180-40389226)
chr8 (11-52)||(3251577-3251618)
[»] chr7 (17 HSPs)
chr7 (8-54)||(43158591-43158637)
chr7 (8-54)||(26994130-26994176)
chr7 (8-54)||(46633836-46633882)
chr7 (8-54)||(3891947-3891993)
chr7 (8-54)||(3922608-3922654)
chr7 (8-54)||(10932462-10932508)
chr7 (8-54)||(11250761-11250807)
chr7 (8-54)||(16963282-16963328)
chr7 (8-54)||(17237220-17237266)
chr7 (8-54)||(18386668-18386714)
chr7 (8-54)||(18470826-18470872)
chr7 (8-54)||(21785015-21785061)
chr7 (8-54)||(43368345-43368391)
chr7 (8-54)||(47953334-47953380)
chr7 (8-54)||(48894861-48894907)
chr7 (10-54)||(26371714-26371758)
chr7 (8-52)||(44748839-44748883)
[»] chr5 (12 HSPs)
chr5 (8-54)||(41459728-41459774)
chr5 (8-54)||(11963481-11963527)
chr5 (8-54)||(34795027-34795073)
chr5 (8-54)||(35701417-35701463)
chr5 (8-52)||(39788333-39788377)
chr5 (8-54)||(7770189-7770235)
chr5 (8-54)||(18470338-18470384)
chr5 (8-54)||(22493329-22493375)
chr5 (8-54)||(24181534-24181580)
chr5 (8-54)||(27838984-27839030)
chr5 (8-54)||(31644585-31644631)
chr5 (8-54)||(32092892-32092938)
[»] chr4 (26 HSPs)
chr4 (8-54)||(3649779-3649825)
chr4 (8-54)||(2725030-2725076)
chr4 (8-54)||(2787107-2787153)
chr4 (8-54)||(6776721-6776767)
chr4 (8-54)||(12601029-12601075)
chr4 (8-54)||(29785434-29785480)
chr4 (8-54)||(38486154-38486200)
chr4 (8-54)||(50727810-50727856)
chr4 (8-54)||(50735824-50735870)
chr4 (8-54)||(55594028-55594074)
chr4 (8-52)||(21202882-21202926)
chr4 (8-52)||(36886075-36886119)
chr4 (8-54)||(1231454-1231500)
chr4 (8-54)||(20517919-20517965)
chr4 (8-54)||(20694514-20694560)
chr4 (8-54)||(23522023-23522069)
chr4 (8-54)||(24002482-24002528)
chr4 (8-54)||(29616309-29616355)
chr4 (8-54)||(37865896-37865942)
chr4 (8-54)||(39078804-39078850)
chr4 (8-54)||(47361311-47361357)
chr4 (8-54)||(50186671-50186717)
chr4 (8-54)||(50729439-50729485)
chr4 (8-44)||(16320662-16320698)
chr4 (8-52)||(21580169-21580213)
chr4 (8-52)||(38812663-38812707)
[»] chr2 (18 HSPs)
chr2 (8-54)||(33889383-33889429)
chr2 (8-54)||(35114925-35114971)
chr2 (8-54)||(7259037-7259083)
chr2 (8-54)||(7761477-7761523)
chr2 (8-54)||(9732834-9732880)
chr2 (8-54)||(34338950-34338996)
chr2 (8-54)||(37308795-37308841)
chr2 (8-54)||(37863270-37863316)
chr2 (8-54)||(42365717-42365763)
chr2 (9-54)||(13829567-13829612)
chr2 (9-54)||(40692438-40692483)
chr2 (8-54)||(2086203-2086248)
chr2 (8-54)||(2644991-2645037)
chr2 (8-54)||(9717341-9717387)
chr2 (8-54)||(18685976-18686022)
chr2 (8-54)||(30326236-30326282)
chr2 (8-45)||(30798401-30798438)
chr2 (8-52)||(42706499-42706543)
[»] chr1 (20 HSPs)
chr1 (8-54)||(32289323-32289369)
chr1 (8-54)||(41967828-41967874)
chr1 (8-54)||(844703-844749)
chr1 (8-54)||(1351414-1351460)
chr1 (8-54)||(6711025-6711071)
chr1 (8-54)||(32270502-32270548)
chr1 (8-54)||(35387290-35387336)
chr1 (8-54)||(38663256-38663302)
chr1 (8-54)||(51264644-51264690)
chr1 (8-54)||(51703143-51703189)
chr1 (8-54)||(15539869-15539915)
chr1 (8-54)||(17327628-17327674)
chr1 (8-54)||(26118194-26118240)
chr1 (8-54)||(30105659-30105705)
chr1 (8-54)||(41973060-41973106)
chr1 (8-54)||(50304800-50304846)
chr1 (7-52)||(24339619-24339664)
chr1 (8-40)||(10384516-10384548)
chr1 (8-44)||(12890387-12890423)
chr1 (8-52)||(28340284-28340328)
[»] scaffold0729 (1 HSPs)
scaffold0729 (8-54)||(4489-4535)
[»] chr6 (14 HSPs)
chr6 (8-54)||(2615036-2615082)
chr6 (8-54)||(15276880-15276926)
chr6 (7-54)||(3290798-3290845)
chr6 (8-54)||(3259823-3259869)
chr6 (8-54)||(10485297-10485343)
chr6 (8-54)||(11212397-11212443)
chr6 (8-54)||(11382202-11382248)
chr6 (8-54)||(11613734-11613780)
chr6 (8-54)||(14807961-14808007)
chr6 (8-54)||(17867975-17868021)
chr6 (8-54)||(17877758-17877804)
chr6 (8-54)||(24203502-24203548)
chr6 (8-54)||(34176970-34177016)
chr6 (8-44)||(24242804-24242840)
[»] chr3 (22 HSPs)
chr3 (8-54)||(1344605-1344651)
chr3 (8-54)||(2135211-2135257)
chr3 (8-54)||(5442420-5442466)
chr3 (8-54)||(20255185-20255231)
chr3 (8-54)||(39052736-39052782)
chr3 (8-54)||(40094644-40094690)
chr3 (8-54)||(50386354-50386400)
chr3 (8-54)||(51259678-51259724)
chr3 (8-52)||(21221261-21221305)
chr3 (8-52)||(29585016-29585060)
chr3 (8-54)||(3695205-3695251)
chr3 (8-54)||(3867547-3867593)
chr3 (8-54)||(20609546-20609592)
chr3 (8-54)||(24571422-24571468)
chr3 (8-54)||(24721626-24721672)
chr3 (8-54)||(25860319-25860365)
chr3 (8-50)||(25927229-25927271)
chr3 (8-54)||(31882920-31882966)
chr3 (8-54)||(42636301-42636347)
chr3 (8-54)||(43175616-43175662)
chr3 (8-54)||(44117080-44117126)
chr3 (8-44)||(4851366-4851402)
[»] scaffold0957 (1 HSPs)
scaffold0957 (8-54)||(2406-2452)
[»] scaffold0280 (1 HSPs)
scaffold0280 (8-54)||(13597-13643)
[»] scaffold0054 (1 HSPs)
scaffold0054 (8-54)||(23715-23761)
[»] scaffold0027 (1 HSPs)
scaffold0027 (8-54)||(15312-15358)
[»] scaffold0014 (1 HSPs)
scaffold0014 (8-54)||(102089-102135)


Alignment Details
Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 15073207 - 15073356
Alignment:
Q  82 taatggttttggttgaagaatcgatagatattctggtttataaggtgcaaagtggtgtcttgcatgcttaataatgaagctggattgttagttaaatcat 181  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15073207 taatggttttggttgaagaatcgatagatactctggtttataaggtgtaaagtggtgtcttgcatgcttaataatgaagctggattgttagttaaatcat 15073306  T
Q  182 gtgttctcttttgctctttctgcataactgtgcaggtgggaagatgtttg 231  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15073307 gggttctcttttgctctttctgcataactgtgcaggtgggaagatgtttg 15073356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 34101648 - 34101694
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  34101648 tacaaatcaaacactggacaactagagttgttctgtcttgtccttca 34101694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 10467204 - 10467250
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  10467204 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 10467250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 29672284 - 29672242
Alignment:
Q  12 aatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  29672284 aatcaaacactggacaactagagttgttctgtcttgtccttca 29672242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 34063268 - 34063314
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  34063268 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 34063314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 38047486 - 38047532
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  38047486 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 38047532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41709917 - 41709963
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  41709917 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 41709963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 4052620 - 4052664
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||    
T  4052620 tacaaatcaaacactggacaactagagttgttctgtcctgtcctt 4052664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 7394776 - 7394733
Alignment:
Q  11 aaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||    
T  7394776 aaatcaaacactggacaactagagttgttctgtcatgtccttca 7394733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 12753290 - 12753244
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||    
T  12753290 tacaaatcaaacactggacaactagagttgttttgtcctgtccttca 12753244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 31513548 - 31513502
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| || |||||||||||||||||| |||||||||    
T  31513548 tacaaatcaaacactggataactagagttgttctgtcatgtccttca 31513502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 31732190 - 31732236
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||| |||||||||||| |||||||||    
T  31732190 tacaaatcaaacactggacaactaaagttgttctgtcctgtccttca 31732236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 32019966 - 32019920
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  |||||||||||||||||||| |||||||||    
T  32019966 tacaaatcaaacactgaacaactagagttgttctgtcctgtccttca 32019920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 37664248 - 37664202
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  37664248 tacaaatcaaacactggacaactagagttattctgtcctgtccttca 37664202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 40389180 - 40389226
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  40389180 tacaaatcaaacactggacaactggagttgttctgtcatgtccttca 40389226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 3251618 - 3251577
Alignment:
Q  11 aaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    |||||||| ||| ||||||||||||||||||||||| |||||    
T  3251618 aaatcaaacactggacaactagagttgttctgtcttatcctt 3251577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 43158637 - 43158591
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  43158637 tacaaatcaaacactggacaactagagttgttctgtcttgtccttca 43158591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 26994176 - 26994130
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  26994176 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 26994130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 46633836 - 46633882
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  46633836 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 46633882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3891993 - 3891947
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| | | ||||||||||||||||||||| |||||||||    
T  3891993 tacaaatcaaacattggacaactagagttgttctgtcctgtccttca 3891947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3922654 - 3922608
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  3922654 tacaaataaaacactggacaactagagttgttctgtcatgtccttca 3922608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 10932508 - 10932462
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  |||||||||||||||||||| |||||||||    
T  10932508 tacaaatcaaacactgaacaactagagttgttctgtcctgtccttca 10932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 11250761 - 11250807
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  11250761 tacaaatgaaacactggacaactagagttgttctgtcatgtccttca 11250807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 16963282 - 16963328
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||| ||||||||||||||| |||||||||    
T  16963282 tacaaatcaaacactggacaattagagttgttctgtcctgtccttca 16963328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 17237220 - 17237266
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  17237220 tacaaatcaaacactggacaactggagttgttctgtcatgtccttca 17237266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 18386668 - 18386714
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||| |||||||||| |||||||||    
T  18386668 tacaaatcaaacactggacaactagaattgttctgtcctgtccttca 18386714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 18470826 - 18470872
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||| || |||||||||    
T  18470826 tacaaatcaaacactcgacaactagagttgttctatcctgtccttca 18470872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 21785015 - 21785061
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  |||||||||||||||||||| |||||||||    
T  21785015 tacaaatcaaacactgaacaactagagttgttctgtcatgtccttca 21785061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 43368345 - 43368391
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  43368345 tacaaatcaaacactggacaactggagttgttctgtcctgtccttca 43368391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 47953334 - 47953380
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||| ||||    
T  47953334 tacaaatcaaacactggacaactagagttgttctgtcctgtcgttca 47953380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 48894861 - 48894907
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  48894861 tacaaatcaaacactggacaactggagttgttctgtcctgtccttca 48894907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 26371758 - 26371714
Alignment:
Q  10 caaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||| ||| ||||||||||||||||||||| | |||||||    
T  26371758 caaatcaaacactggacaactagagttgttctgtcctatccttca 26371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 44748839 - 44748883
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  44748839 tacaaatcaaacactggacaactagagttgttttgtcctgtcctt 44748883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41459728 - 41459774
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||    
T  41459728 tacaaatcaaatactaaacaactagagttgttctgtcatgtccttca 41459774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 11963481 - 11963527
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  11963481 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 11963527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 34795027 - 34795073
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||    
T  34795027 tacaaatcaaatattggacaactagagttgttctgtcatgtccttca 34795073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 35701417 - 35701463
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  35701417 tacaaatcaaacactggacaactagagttgttctatcttgtccttca 35701463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 39788333 - 39788377
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||    
T  39788333 tacaaatcaaatactggacaactagaattgttctgtcctgtcctt 39788377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 7770235 - 7770189
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||| || |||||||||    
T  7770235 tacaaatcaaacactggacaactagagttgttctatcatgtccttca 7770189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 18470384 - 18470338
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| || |||| |||||||||||||||||||||||    
T  18470384 tacaaatcaaacactggataactggagttgttctgtcttgtccttca 18470338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 22493375 - 22493329
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  22493375 tacaaattaaacactggacaactagagttgttctgtcctgtccttca 22493329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 24181580 - 24181534
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||    
T  24181580 tacaaatcaaacactggacaactagagttgttttgtcatgtccttca 24181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 27839030 - 27838984
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  27839030 tacaaatcaaacactggacaactggagttgttctgtcatgtccttca 27838984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 31644585 - 31644631
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  31644585 tacaaatcaaacactggacaactagagttgttctgtcccgtccttca 31644631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 32092938 - 32092892
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  |||||| |||||||||||||||||||||||    
T  32092938 tacaaatcaaacactgcacaactggagttgttctgtcttgtccttca 32092892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 3649779 - 3649825
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  3649779 tacaaatcaaacactagacaactggagttgttctgtcttgtccttca 3649825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 2725076 - 2725030
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  2725076 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 2725030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 2787107 - 2787153
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||||    
T  2787107 tacaaatcaaacactagacaactagagttgttatgtcatgtccttca 2787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 6776721 - 6776767
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  6776721 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 6776767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 12601029 - 12601075
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  12601029 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 12601075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 29785480 - 29785434
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  29785480 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 29785434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 38486200 - 38486154
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  38486200 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 38486154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 50727856 - 50727810
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  50727856 tacaaatcaaacacttgacaactagagttgttctgtcatgtccttca 50727810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 50735870 - 50735824
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  50735870 tacaaatcaaacacttgacaactagagttgttctgtcatgtccttca 50735824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 55594028 - 55594074
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  55594028 tacaaatcaaatactggacaactagagttgttctgtcctgttcttca 55594074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 21202882 - 21202926
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||    
T  21202882 tacaaatcaaacactggacaactagagttgttctgtcctgtcctt 21202926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 36886075 - 36886119
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||    
T  36886075 tacaaatcaaacactggacaactagagttgttttgtcttgtcctt 36886119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 1231454 - 1231500
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| | |||||||    
T  1231454 tacaaatcaaacactggacaactagagttgttctgtcctatccttca 1231500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 20517965 - 20517919
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  |||||||||||||||||||| |||||||||    
T  20517965 tacaaatcaaacactgaacaactagagttgttctgtcctgtccttca 20517919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 20694514 - 20694560
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||| ||| ||| |||||||||||||||||||| ||||||||||    
T  20694514 tacaaattaaacactggacaactagagttgttctgtgttgtccttca 20694560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 23522023 - 23522069
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||    
T  23522023 tacaaatcaaacactggacaactagagttgttttgtcctgtccttca 23522069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 24002482 - 24002528
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||  |||||||||    
T  24002482 tacaaatcaaacactggacaactagagttgttctgtactgtccttca 24002528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 29616309 - 29616355
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||| || |||||||||    
T  29616309 tacaaatcaaacactggacaactagagttgttctatcatgtccttca 29616355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 37865896 - 37865942
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||    
T  37865896 tacaaatcaaacactggacaactagagttgttatgtcgtgtccttca 37865942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 39078804 - 39078850
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  39078804 tacaaatcaaacactggacaactggagttgttctgtcatgtccttca 39078850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 47361357 - 47361311
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||| |||||||||||| |||||||||    
T  47361357 tacaaatcaaacactggacaactaaagttgttctgtcctgtccttca 47361311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 50186671 - 50186717
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  ||||||||||||||||| ||||||||||||    
T  50186671 tacaaatcaaacactgaacaactagagttgttctttcttgtccttca 50186717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 50729485 - 50729439
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  50729485 tacaaatcaaacactggacaactgaagttgttctgtcttgtccttca 50729439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 16320662 - 16320698
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtc 44  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  16320662 tacaaatcaaatactggacaactggagttgttctgtc 16320698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 21580169 - 21580213
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||||||| ||||| |||| |||||||||| |||||||    
T  21580169 tacaaatcaaatactggacaattagaattgttctgtcctgtcctt 21580213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 38812663 - 38812707
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  38812663 tacaaatcaaacactggacaactagagttgttatgtcctgtcctt 38812707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 33889383 - 33889429
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  33889383 tacaaatcaaacactagacaactagagttgttctgtcctgtccttca 33889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 35114925 - 35114971
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  35114925 tacaaatcaaacactagacaactagagttgtcctgtcttgtccttca 35114971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 7259037 - 7259083
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||||||| |||||||||||||||| |||||||||    
T  7259037 tacaaatcaaacactagacagctagagttgttctgtcatgtccttca 7259083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 7761523 - 7761477
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  7761523 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 7761477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 9732880 - 9732834
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  9732880 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 9732834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 34338950 - 34338996
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  34338950 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 34338996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 37308795 - 37308841
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  37308795 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 37308841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 37863316 - 37863270
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  37863316 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 37863270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 42365717 - 42365763
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||||    
T  42365717 tacaaatcaaacactagacaactagagttgttatgtcatgtccttca 42365763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 13829567 - 13829612
Alignment:
Q  9 acaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||    
T  13829567 acaaatcaaacactggacaactagagttgttctgtcctgtccttca 13829612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 40692438 - 40692483
Alignment:
Q  9 acaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||||    
T  40692438 acaaattaaacactggacaactagagttgttctgtcttgtccttca 40692483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 2086203 - 2086248
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  2086203 tacaaatcaaacactggacaactagagttg-tctgtcttgtccttca 2086248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 2645037 - 2644991
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||| || |||||||||    
T  2645037 tacaaatcaaacactggacaactagagttgttctatcctgtccttca 2644991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 9717341 - 9717387
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  |||||||||||||||||||| |||||||||    
T  9717341 tacaaatcaaacactgaacaactagagttgttctgtcctgtccttca 9717387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 18685976 - 18686022
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  18685976 tacaaatcaaacactggacaactagagttattctgtcatgtccttca 18686022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 30326282 - 30326236
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||| |||||| |||||||||    
T  30326282 tacaaatcaaacactggacaactagagttgctctgtcctgtccttca 30326236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 30798438 - 30798401
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtct 45  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  30798438 tacaaatcaaacactggacaactagagttgttctgtct 30798401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 42706499 - 42706543
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||| ||| |||||||||| |||||||||| |||||||    
T  42706499 tacaaatcaaacactggacaactagaattgttctgtcctgtcctt 42706543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 32289369 - 32289323
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  32289369 tacaaatcaaacactggacaactagagttgttctgtcttgtccttca 32289323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 41967874 - 41967828
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  41967874 tacaaatcaaatactggacaactagagttgttctgtcctgtccttca 41967828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 844749 - 844703
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  844749 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 844703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 1351460 - 1351414
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  1351460 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 1351414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 6711071 - 6711025
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  6711071 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 6711025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 32270502 - 32270548
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  32270502 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 32270548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 35387336 - 35387290
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  35387336 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 35387290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 38663256 - 38663302
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  38663256 tacaaatcaaacactggacaactggagttgttctgtcttgtccttca 38663302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 51264644 - 51264690
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  51264644 tacaaatcaaacactggacaactagagttattctgtcttgtccttca 51264690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 51703189 - 51703143
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  51703189 tacaaatcaaacactggacaattagagttgttctgtcttgtccttca 51703143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 15539915 - 15539869
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  15539915 tacaaatcaaacactggacaactggagttgttctgtcctgtccttca 15539869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 17327674 - 17327628
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||| ||| ||| |||||||||||||||| ||||||||||||||    
T  17327674 tacaaattaaacactggacaactagagttgttttgtcttgtccttca 17327628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 26118240 - 26118194
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||    
T  26118240 tacaaatcaaacactggacaactagagttgttatgtcatgtccttca 26118194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 30105705 - 30105659
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||| || |||||||||    
T  30105705 tacaaatcaaacactggacaactagagttgttctatcctgtccttca 30105659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41973060 - 41973106
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||| || |||||||||    
T  41973060 tacaaatcaaacactggacaactagagttgttctatcctgtccttca 41973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 50304800 - 50304846
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  50304800 tacaaatcaaacactggacaactggagttgttctgtcctgtccttca 50304846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 24339664 - 24339619
Alignment:
Q  7 atacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    |||||||||||| |||  |||||||||||||||||||| |||||||    
T  24339664 atacaaatcaaacactgaacaactagagttgttctgtcctgtcctt 24339619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 10384516 - 10384548
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttc 40  Q
    ||||||||||| |||||||||||||||||||||    
T  10384516 tacaaatcaaacactagacaactagagttgttc 10384548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 12890387 - 12890423
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtc 44  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  12890387 tacaaatcaaacactggacaactagagttgttctgtc 12890423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 28340328 - 28340284
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||| ||| |||||||||||||||||| || |||||||    
T  28340328 tacaaatcaaacactggacaactagagttgttctatcctgtcctt 28340284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 4535 - 4489
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  4535 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 4489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 2615036 - 2615082
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| | | |||||||||||||||||||||||||||||||    
T  2615036 tacaaatcaaacagtggacaactagagttgttctgtcttgtccttca 2615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 15276926 - 15276880
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||    
T  15276926 tacaaatcaaacattagacaactagagttgttctgtcatgtccttca 15276880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 3290798 - 3290845
Alignment:
Q  7 atacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    |||||||||||| |||  |||||||||||||||||||| |||||||||    
T  3290798 atacaaatcaaacactgaacaactagagttgttctgtcatgtccttca 3290845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 3259823 - 3259869
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||    
T  3259823 tacaaatcaaacactggacaactagagttgttttgtcatgtccttca 3259869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 10485297 - 10485343
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| |||||||| ||||||||||||||    
T  10485297 tacaaatcaaacactggacaactggagttgttttgtcttgtccttca 10485343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 11212397 - 11212443
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  11212397 tacaaatcaaacactggacaactagagttgttctgtcccgtccttca 11212443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 11382202 - 11382248
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  11382202 tacaaattaaacactggacaactagagttgttctgtcatgtccttca 11382248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 11613780 - 11613734
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||| |||||||||||| |||||||||    
T  11613780 tacaaatcaaacactggacaactaaagttgttctgtcctgtccttca 11613734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 14808007 - 14807961
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  14808007 tacaaatcaaacactggacaactggagttgttctgtcatgtccttca 14807961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 17867975 - 17868021
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||||||    
T  17867975 tacaaatcaaacactggacagctagagttgttctgtcctgtccttca 17868021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 17877758 - 17877804
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||||||    
T  17877758 tacaaatcaaacactggacagctagagttgttctgtcctgtccttca 17877804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 24203502 - 24203548
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||| |||||||||||| |||||||||    
T  24203502 tacaaatcaaacactggacaactatagttgttctgtcatgtccttca 24203548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 34176970 - 34177016
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |   |||||||||||||||||||||||||||||||    
T  34176970 tacaaatcaaacaagtgacaactagagttgttctgtcttgtccttca 34177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 24242804 - 24242840
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtc 44  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  24242804 tacaaatcaaacactggacaactagagttgttctgtc 24242840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 1344651 - 1344605
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  1344651 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 1344605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 2135211 - 2135257
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  2135211 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 2135257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 5442420 - 5442466
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  5442420 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 5442466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 20255185 - 20255231
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  20255185 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 20255231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 39052782 - 39052736
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  39052782 tacaaatcaaacactagacaactagagttgttttgtcttgtctttca 39052736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 40094644 - 40094690
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  40094644 tacaaatcaaacactggacaactagagttgttctgtcctgtccttca 40094690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 50386400 - 50386354
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  50386400 tacaaatcaaacactagacaactggagttgttctgtcctgtccttca 50386354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 51259724 - 51259678
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  51259724 tacaaatcaaacactggacaactagagttgttctgtcatgtccttca 51259678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 21221305 - 21221261
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||    
T  21221305 tacaaatcaaatattggacaactagagttgttctgtcctgtcctt 21221261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 29585016 - 29585060
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcctt 52  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||    
T  29585016 tacaaatcaaacactggacaactagagttgttctgtcctgtcctt 29585060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3695251 - 3695205
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||    
T  3695251 tacaaatcaaacactggacaactagagttgttttgtcctgtccttca 3695205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 3867593 - 3867547
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||  ||||||| |||||||||||||||||||||||    
T  3867593 tacaaatcaaacaccggacaactggagttgttctgtcttgtccttca 3867547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 20609592 - 20609546
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| | | ||||||||||||||||||||| |||||||||    
T  20609592 tacaaatcaaacattggacaactagagttgttctgtcctgtccttca 20609546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 24571422 - 24571468
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||||    
T  24571422 tacaaatcaaacactggacaactagagttgttttgtcctgtccttca 24571468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 24721626 - 24721672
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  |||||||||||||||||||| |||||||||    
T  24721626 tacaaatcaaacactgaacaactagagttgttctgtcatgtccttca 24721672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 25860365 - 25860319
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  25860365 tacaaatcaaacactggacaactagagttgttctgtcaagtccttca 25860319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 25927271 - 25927229
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtcc 50  Q
    ||||||||||| | ||||||||||||||||||||||| |||||    
T  25927271 tacaaatcaaacattagacaactagagttgttctgtcctgtcc 25927229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 31882966 - 31882920
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  31882966 tacaaatcaaacactggacaactggagttgttctgtcatgtccttca 31882920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 42636347 - 42636301
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||| |||||||||| |||||||||    
T  42636347 tacaaatcaaacactggacaactagaattgttctgtcctgtccttca 42636301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 43175616 - 43175662
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||  |||||||||    
T  43175616 tacaaatcaaacactggacaactagagttgttctgttctgtccttca 43175662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 44117080 - 44117126
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  44117080 tacaaatcaaacactggacaactagagttgttctgtccagtccttca 44117126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 4851402 - 4851366
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtc 44  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  4851402 tacaaatcaaacactggacaactagagttgttctgtc 4851366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 2452 - 2406
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| |||  ||||||||||||||| ||||||||||||||    
T  2452 tacaaatcaaacactgaacaactagagttgttatgtcttgtccttca 2406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 13643 - 13597
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  13643 tacaaatcaaacactggacaactggagttgttctgtcctgtccttca 13597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 23715 - 23761
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||||||||||||||||||| || ||||||    
T  23715 tacaaatcaaacactggacaactagagttgttctgtcctgcccttca 23761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 15312 - 15358
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| ||||| |||||||||| ||||||||||||||    
T  15312 tacaaatcaaacactggacaattagagttgttttgtcttgtccttca 15358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 102089 - 102135
Alignment:
Q  8 tacaaatcaaatactagacaactagagttgttctgtcttgtccttca 54  Q
    ||||||||||| ||| || |||||||||||||||||| |||||||||    
T  102089 tacaaatcaaacactggataactagagttgttctgtcatgtccttca 102135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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