View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1370-INSERTION-7 (Length: 565)
Name: NF1370-INSERTION-7
Description: NF1370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1370-INSERTION-7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 550; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 550; E-Value: 0
Query Start/End: Original strand, 8 - 565
Target Start/End: Complemental strand, 39109948 - 39109391
Alignment:
| Q |
8 |
attaccacttaagtttgtcatgttttcagggaaatagccccaagcaaattgaactggatggagatgaaggtttcttccaatgtttggattttgtagtcca |
107 |
Q |
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| T |
39109948 |
attaccacttaagtttgtcatgttttcagggaaatagccccaagcaaattgaactggatggagatgaaggtttcttccaatgtttggattttgtagtcca |
39109849 |
T |
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| Q |
108 |
ctagaaatcattagaggaggtgtaagtagtgatccacatgatgaaatagttactttggattctatttggagtttctttgtaatcttactcctccaacttg |
207 |
Q |
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| T |
39109848 |
ctagaaatcattagaggaggtgtaagtagtgatccacatgatgaaatagttactttggattctatttggagtttctttgtaatcttactcctccaacttg |
39109749 |
T |
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| Q |
208 |
ttgcagcaatcactcctgagcaattctttctctttgttccattcttcccattttctattatgaatttctcagctctacatccagtgaggataactgcgcc |
307 |
Q |
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| T |
39109748 |
ttgcagcaatcactcctgagcaattctttctctttgtttcattcttcccattttctattatgaatttctcagctctacatccagtgaggataactgcgcc |
39109649 |
T |
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| Q |
308 |
attttcaacagcatcaaccaaccaagttgagtcagtaccctttttatctccggttctacaaccgtaacagcacgaaccgcaataatgatcttctgaagca |
407 |
Q |
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| T |
39109648 |
attttcaacagcatcaaccaaccaagttgagtcagtaccctttttatctccggttctacaaccgtaacagcacgaaccgcaataatgatcttctgaagca |
39109549 |
T |
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| Q |
408 |
ttcactgcaactgactcgacttttaaaccaattctctcacaccctttccgaagaacttgattttgaaagctttgcttgttgcatttatctgtcacaccaa |
507 |
Q |
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| T |
39109548 |
ttcactgcaactgactcgacttttaaaccaattctctcacaccctttccgaagaacttgattttgaaagctttgcttgttgcatttatctgtcacaccaa |
39109449 |
T |
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| Q |
508 |
tccttctgcataccgagtccatagcagattgataatcagagcttgtgaaaagcggtag |
565 |
Q |
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| T |
39109448 |
tccttctgcataccgagtccatagcagattgatagtcagagcttgtgaaaagcggtag |
39109391 |
T |
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