View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13702_high_13 (Length: 271)
Name: NF13702_high_13
Description: NF13702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13702_high_13 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 8 - 271
Target Start/End: Original strand, 11601757 - 11602020
Alignment:
| Q |
8 |
agataatacttcaatcataagtgttcgtgtaatggtgttacaaagctcaagttactctttggtgttttcatctcaactaacttagaaaaatccttagaca |
107 |
Q |
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| T |
11601757 |
agataagacttcaatcataagtgttggtgtaatggtgttacaaagctcaagttactctttggtgttttcatctcaactaacttagaaaaatccttagata |
11601856 |
T |
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| Q |
108 |
ttctcattcacacttccaaatctgattctagatgttctaaccttggtttcaaaagagttttccctgtagtcctcagtatacttcactcacaaacctttac |
207 |
Q |
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| T |
11601857 |
ttctcattcacacttccaaatctgattctagatgttctaaccttggtttcaaaagagttttccctgtagtcctcagtatacttcactcacaaacctttac |
11601956 |
T |
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| Q |
208 |
tttatatcattatattctatctttgtgttcaaagctcctcagaaacttgtgtgctggagaattt |
271 |
Q |
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| T |
11601957 |
tttatatcattatattctatctttgtgttcaaagctcctcagaaacttgtgtgctggagaattt |
11602020 |
T |
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