View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13702_low_10 (Length: 349)
Name: NF13702_low_10
Description: NF13702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13702_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 13 - 334
Target Start/End: Complemental strand, 44829337 - 44829016
Alignment:
| Q |
13 |
aacctgtgagaactatcaggatgccaagcatcaacaggttacctccatatacgtcttggatacatttagccaggtgtgtttgacttataaatttcaatga |
112 |
Q |
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| T |
44829337 |
aacctgtgagaactatcaggatgccaagcatcaacaggttacctccatatacgtcttggatacatttagccaggtgtgtttgaattataaatttcaatga |
44829238 |
T |
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| Q |
113 |
catgttgtgaatcctattacatgaaaatttttaggaagtgaaagtgtatgtttaatatgcatttgatgtcaaatgttattgatcaatctatgttaaattt |
212 |
Q |
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| T |
44829237 |
catgttgtgaatcctcttacatgaaaatttttaggaagtgaaagtgtatgtttaatatgcatttgatgtcaaatgttattgatcaatctatgttaaattt |
44829138 |
T |
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| Q |
213 |
gtgtcgtctatttactactttttgaaaacatttcttgcaaaatagaaatgaaaaaatgactgcagatcaggcagtttctagaaaaagaaatgtatattat |
312 |
Q |
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| T |
44829137 |
gtgtcgtctatttactactttctgaaaacatttcttgcaaaatagaaatgaaaaaatgactgcagatcaggcagtttctagaaaaagaaatgtatattat |
44829038 |
T |
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| Q |
313 |
aatcatcaggaaggtgaaacat |
334 |
Q |
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| T |
44829037 |
aatcatcaggaaggtgaaacat |
44829016 |
T |
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