View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13702_low_12 (Length: 323)
Name: NF13702_low_12
Description: NF13702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13702_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 7 - 309
Target Start/End: Complemental strand, 6986115 - 6985813
Alignment:
| Q |
7 |
aggacgtgctcagaagaactatatgctgcagaagattacaactcaacgaagtttttgagcgacagggatcgatatatggagacaattttaggccccagca |
106 |
Q |
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| T |
6986115 |
aggacgtactcagaagaactatatgctgcagaagattacaactcaacgaagtttttgagcgacagggatcgatatatggagacgattttaggccccagca |
6986016 |
T |
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| Q |
107 |
atccaaattagattatggtttgtgattgattcagatacatagaactacaaaagtttacattaaaggaagtgatgtatatgaatatgagctgattccactt |
206 |
Q |
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| T |
6986015 |
atccaaattagattatggtttgtgattgattcagatgcatagaactacaaaagtttacattaaaggaagtgatgtacatgaatatgagctgattccactt |
6985916 |
T |
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| Q |
207 |
gtggatttagtgttggccagaacattgattgaagaagttaacagcagacacnnnnnnngataaagaggcagaaccacatttgcatgaagcatgtatttta |
306 |
Q |
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| T |
6985915 |
gtggatttagtgttggccagaacattgattaaagaagttaacaacagacacaaaaagagataaagaggcagaaccacatgtgcatgaagcatgtatttta |
6985816 |
T |
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| Q |
307 |
ttt |
309 |
Q |
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| T |
6985815 |
ttt |
6985813 |
T |
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