View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13702_low_23 (Length: 241)
Name: NF13702_low_23
Description: NF13702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13702_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 8 - 229
Target Start/End: Complemental strand, 42984876 - 42984655
Alignment:
| Q |
8 |
cgaagaatatattttcttaagtactgactctacaatattttggctccagggtttgaattatgttgcagcattgttgttgctggtcatgaaaaccgaagaa |
107 |
Q |
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| T |
42984876 |
cgaagaatgtatcttcttaagtactgactctacaatattttggctccagggtttgaattatgttgcagcattgttgttgctggtcatgaaaaccgaagaa |
42984777 |
T |
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| Q |
108 |
gatgcattttggatgcttgctgtcttgttggaaaatgtcctggttagcgactgttacacaaacaacttatcaggatgccatgttgagcaaagagtgttca |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42984776 |
gatgcattttggatgcttgctgtcttgttggaaaatgtcctggttagcgactgttacacaaacaacttatcaggatgccatgttgagcaaagagtgttca |
42984677 |
T |
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| Q |
208 |
aagacttactcactaaaaagtg |
229 |
Q |
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|||||||||||||||||||||| |
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| T |
42984676 |
aagacttactcactaaaaagtg |
42984655 |
T |
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