View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13702_low_7 (Length: 394)

Name: NF13702_low_7
Description: NF13702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13702_low_7
NF13702_low_7
[»] chr6 (1 HSPs)
chr6 (1-379)||(13328035-13328410)
[»] chr4 (9 HSPs)
chr4 (25-380)||(37919602-37919953)
chr4 (207-380)||(33832004-33832177)
chr4 (207-372)||(46596498-46596663)
chr4 (207-372)||(6679360-6679525)
chr4 (207-372)||(22505430-22505595)
chr4 (212-294)||(37074181-37074263)
chr4 (207-297)||(50959907-50959997)
chr4 (25-159)||(33831827-33831958)
chr4 (252-371)||(7567787-7567905)
[»] chr8 (3 HSPs)
chr8 (213-369)||(36998094-36998246)
chr8 (207-372)||(43734134-43734299)
chr8 (19-159)||(36997904-36998041)
[»] chr2 (2 HSPs)
chr2 (207-372)||(38503446-38503611)
chr2 (213-294)||(32666011-32666092)
[»] chr5 (2 HSPs)
chr5 (207-372)||(18843-19008)
chr5 (207-372)||(21292229-21292394)
[»] chr3 (1 HSPs)
chr3 (212-292)||(36497942-36498022)
[»] chr7 (6 HSPs)
chr7 (207-294)||(37980655-37980742)
chr7 (207-294)||(45187213-45187300)
chr7 (252-360)||(8983475-8983583)
chr7 (214-294)||(42360124-42360204)
chr7 (213-372)||(6997934-6998093)
chr7 (207-372)||(44266093-44266256)
[»] chr1 (3 HSPs)
chr1 (213-292)||(35023526-35023605)
chr1 (40-107)||(19824981-19825048)
chr1 (243-295)||(52982024-52982076)


Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 379
Target Start/End: Complemental strand, 13328410 - 13328035
Alignment:
Q  1 agtttattccgatatttgtgtttttatttgatggttgtccaagaggtttcaacttcagtcacaatggctcatgtaagtaattcaacagttttccagtctc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||    
T  13328410 agtttgttccgatatttgtgtttttatttgatggttgtccaagaggtttcaacttcagtcacaatggctcatgtaagtaattcaacagtttgcccatctc 13328311  T
Q  101 actctatcgggtcatggattttagattcaggcacttcttctgatcatgtagttggtaatttgtcctttgtttataacttgacgcctcctnnnnnnnnnnn 200  Q
    ||||||| |||||||||||||||||||||||| |||||   ||||||||||||||||||  |||| |||||||||||||||| ||||||               
T  13328310 actctatggggtcatggattttagattcaggcgcttct---gatcatgtagttggtaatccgtcccttgtttataacttgacacctcctaaaactacctc 13328214  T
Q  201 nnnnnnttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccc 300  Q
          ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  13328213 acaaaattacccttgctaatgattctaaggcgcaggttattggtattggtaaagcttcacctttgctatctctatccttggattatgtgttatttgtccc 13328114  T
Q  301 cggctgccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttctggttct 379  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  13328113 cggctgccctttcaatttgatttcaatcattaagcttacatgttctctcaattgtttcataacatttacttctggttct 13328035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 25 - 380
Target Start/End: Complemental strand, 37919953 - 37919602
Alignment:
Q  25 tatttgatggttgtccaagaggtttcaacttcagtcacaatggctcatgtaagtaattcaacagttttccagtctcactctatcgggtcatggattttag 124  Q
    ||||||||||||  |||| ||||||||||||| || ||| || ||||| | |||||||| || |||| |   ||||||||||| || |||||||||||||    
T  37919953 tatttgatggtttcccaaaaggtttcaacttcggttacattgtctcatttcagtaattctacggtttgcttatctcactctatgggatcatggattttag 37919854  T
Q  125 attcaggcacttcttctgatcatgtagttggtaatttgtcctttgtttataacttgacgcctcctnnnnnnnnnnnnnnnnnttaccgttgctaatgatt 224  Q
    |||| ||   | ||||||||||||||||||||||| ||||  || ||||||| ||| | ||||||                 ||||| ||||||||| ||    
T  37919853 attcggg---tgcttctgatcatgtagttggtaatatgtctcttatttataatttgtcacctcctaaaatacctcacagca-ttacccttgctaatggtt 37919758  T
Q  225 ctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctgccccttcaatatgatttc 324  Q
    ||||||| || ||||| ||||||||| |||| ||||| ||  |||||||| | |||||||||||||||||||| || || |||||||||||| |||||||    
T  37919757 ctaaggcacaagttaccggtattggtcaagcgtcacccttgccatctctacctttggattatgtgttatttgtgcctggttgccccttcaatttgatttc 37919658  T
Q  325 aatcattaagcttacatgttctctcaatcgttccataacatttacttctggttctt 380  Q
    ||||| ||| |||||  |||||||| || |||||||||||||||||| ||||||||    
T  37919657 aatcagtaaacttactagttctctcgattgttccataacatttacttttggttctt 37919602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 33832004 - 33832177
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||| ||||||||| || ||||| ||||||||| |||| ||||| ||  |||||||| | |||||||||||||||||||| || |||||    
T  33832004 ttacccttgctaatggttctaaggcacaagttaccggtattggtcaagcgtcacccttgccatctctacctttggattatgtgttatttgtgcctggctg 33832103  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttctggttctt 380  Q
    |||||||||| |||||||||||| ||||| |||  |||||||| || |||||||||||||||||||| ||||||    
T  33832104 ccccttcaatttgatttcaatcagtaagcctactagttctctcgattgttccataacatttacttctagttctt 33832177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 372
Target Start/End: Complemental strand, 46596663 - 46596498
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||| ||||||||| || ||||||||||||||| | || |||||| | ||||||||||| ||| |||||||||||||||| || || ||    
T  46596663 ttacccttgctaatggttctaaggcacaagttactggtattggtcaggcatcacctctatcatctctatcattgaattatgtgttatttgtacctggttg 46596564  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttc 372  Q
     || || ||| |||| ||||||| |||||||||    ||||||||| |||||||||||||| ||||    
T  46596563 tccttttaatttgatatcaatcagtaagcttactgactctctcaattgttccataacattttcttc 46596498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 372
Target Start/End: Original strand, 6679360 - 6679525
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||| ||||||||| || ||||||||| ||||| | || |||||| |  |||||||||| ||| |||||||||||||||| || || ||    
T  6679360 ttacccttgctaatggttctaaggcacaagttactggttttggtcaggcctcacctctaccatctctatcattgaattatgtgttatttgtacctggttg 6679459  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttc 372  Q
     || || ||| |||| ||||||| ||||||||     ||||||||| |||||||||||||| ||||    
T  6679460 tccttttaatttgatatcaatcagtaagcttattgactctctcaattgttccataacattttcttc 6679525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 372
Target Start/End: Complemental strand, 22505595 - 22505430
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||| ||||||||| || |||||| |||||||| |  | |||||| |  |||||||||| ||  |||||||||||||||| || || ||    
T  22505595 ttacccttgctaatggttctaaggcacaagttactagtattggtcagacatcacctctaccatctctatcatttaattatgtgttatttgtacctggttg 22505496  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttc 372  Q
     || || ||| |||| ||||||| ||||||||| |  ||||||||| |||||||||||||| ||||    
T  22505495 tccttttaatttgatatcaatcagtaagcttacttactctctcaattgttccataacattttcttc 22505430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 37074181 - 37074263
Alignment:
Q  212 gttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatt 294  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||| ||| |  |||||||||| ||| |||||||||||||    
T  37074181 gttgctaatgattctaaggcacaagttactggtattggtcaagcttctcctctgccatctctatcattgaattatgtgttatt 37074263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 50959907 - 50959997
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgt 297  Q
    ||||| ||||||||| ||||||||| || ||||||||||||||| | || |||||| |  |||||||||| ||| ||||||||||||||||    
T  50959907 ttacccttgctaatggttctaaggcacaagttactggtattggtcaggcctcacctctgccatctctatcattgaattatgtgttatttgt 50959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 33831827 - 33831958
Alignment:
Q  25 tatttgatggttgtccaagaggtttcaacttcagtcacaatggctcatgtaagtaattcaacagttttccagtctcactctatcgggtcatggattttag 124  Q
    |||||||||| |  |||| ||||||||||||| || ||| |||||||| | |||||||| || |||| |   ||||||||||| || |||||||||||||    
T  33831827 tatttgatggcttaccaaaaggtttcaacttcggttacattggctcatttcagtaattctacggtttgcttatctcactctatgggatcatggattttag 33831926  T
Q  125 attcaggcacttcttctgatcatgtagttggtaat 159  Q
    |||| ||   | |||||||| ||||||||||||||    
T  33831927 attcggg---tgcttctgattatgtagttggtaat 33831958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 371
Target Start/End: Complemental strand, 7567905 - 7567787
Alignment:
Q  252 aagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctgccccttcaatatgatttcaatcattaagcttacatgttctctcaa 351  Q
    |||||||||||||  ||||||||||||| |||||  |||||||||| || |  ||||||||  || |||||||||||  ||| ||||| | |||||||||    
T  7567905 aagcttcacctttgccatctctatccttagattacatgttatttgtacctgagtgcccctttgatttgatttcaatctgtaaacttacttattctctcaa 7567806  T
Q  352 tcgttccataacatttactt 371  Q
    | ||||||| ||||||||||    
T  7567805 ttgttccat-acatttactt 7567787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 369
Target Start/End: Original strand, 36998094 - 36998246
Alignment:
Q  213 ttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctgcccctt 312  Q
    ||||||||| ||||||||| || ||||||||||||    ||||||||||  |  |||||||| ||||| |||||||||||||||| || |||||||| ||    
T  36998094 ttgctaatggttctaaggcacaagttactggtatt----aagcttcacccctgccatctctacccttgcattatgtgttatttgtacctggctgcccttt 36998189  T
Q  313 caatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttac 369  Q
    |||| |||||||||||| || ||||||  ||||||||||| |||  |||||||||||    
T  36998190 caatttgatttcaatcagtaggcttactcgttctctcaattgttttataacatttac 36998246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 207 - 372
Target Start/End: Original strand, 43734134 - 43734299
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||| ||||||||| || ||||||||||||||| | || |||||| |  |||||||||| ||| |||||||||||||||| || || ||    
T  43734134 ttacccttgctaatggttctaaggcacaagttactggtattggtcaggcctcacctctaccatctctatcattgaattatgtgttatttgtacctggttg 43734233  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttc 372  Q
     || || ||| |||| ||||||| |||||||||    ||||||||| |||| ||||||||| ||||    
T  43734234 tccttttaatttgatatcaatcagtaagcttactgactctctcaattgttctataacattttcttc 43734299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 36997904 - 36998041
Alignment:
Q  19 tgtttttatttgatggttgtccaagaggtttcaacttcagtcacaatggctcatgtaagtaattcaacagttttccagtctcactctatcgggtcatgga 118  Q
    ||||| |||||||||| || |||| ||||||||||||| || ||| |||||||| | |||||||| ||| | | |   ||||| ||||| || ||| |||    
T  36997904 tgtttgtatttgatggctgcccaaaaggtttcaacttcggttacattggctcatttcagtaattctacaatctgcttatctcattctatgggatcacgga 36998003  T
Q  119 ttttagattcaggcacttcttctgatcatgtagttggtaat 159  Q
    |||||||||| ||   | |||||||||||||||||||||||    
T  36998004 ttttagattcggg---tgcttctgatcatgtagttggtaat 36998041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 372
Target Start/End: Original strand, 38503446 - 38503611
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||| ||||||||| || ||||||||||||||| | || |||||| |  |||||||||| ||| |||||||||||||||| || || ||    
T  38503446 ttacccttgctaatggttctaaggcacaagttactggtattggtcaggcctcacctctaccatctctatcattgaattatgtgttatttgtacctggttg 38503545  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttc 372  Q
     || || ||| |||| ||||||| |||||||||    ||||||||| |||||||||||||| ||||    
T  38503546 tccttttaatttgatatcaatcagtaagcttactgactctctcaattgttccataacattttcttc 38503611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 32666092 - 32666011
Alignment:
Q  213 ttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatt 294  Q
    ||||||||| ||||||| | || ||||||||||||||| |||||||||||||  |||||||| ||||| || ||||| ||||    
T  32666092 ttgctaatgcttctaagtcacaagttactggtattggtcaagcttcacctttgccatctctacccttgaatcatgtggtatt 32666011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 207 - 372
Target Start/End: Original strand, 18843 - 19008
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||  ||||||||| || ||||||||||||||| | || |||||| |  |||||||||| ||| |||||||||||||||| || || ||    
T  18843 ttacccttgctaattgttctaaggcacaagttactggtattggtcaggcctcacctctgccatctctatcattgaattatgtgttatttgtacctggttg 18942  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttc 372  Q
     || || ||| |||| ||||||| |||||||||    ||||||||| |||||||||||||| ||||    
T  18943 tccttttaatttgatatcaatcagtaagcttactgactctctcaattgttccataacattttcttc 19008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 372
Target Start/End: Original strand, 21292229 - 21292394
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||| ||||||||  || ||||||||||||||| | || |||||  |  ||||| |||| ||| |||||||||||||||| || || ||    
T  21292229 ttacccttgctaatggttctaaggaacaagttactggtattggtcaggcctcacccctgccatctttatcattgaattatgtgttatttgtacctggttg 21292328  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttc 372  Q
     || || ||| |||| ||||||| |||||||||    ||||||||| |||||||||||||| ||||    
T  21292329 tccttttaatttgatatcaatcagtaagcttactgactctctcaattgttccataacattttcttc 21292394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 36497942 - 36498022
Alignment:
Q  212 gttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgtta 292  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||||| ||| |  |||||||||||||| |||||||||||    
T  36497942 gttgctaatggttctaaggcacaagttactggtattggtcaagcttctcctctgccatctctatccttgaattatgtgtta 36498022  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 37980742 - 37980655
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatt 294  Q
    |||| |||||||||| ||||||||| ||  |||||||||||||| ||||||| ||| |  |||||||||| ||| |||||||||||||    
T  37980742 ttactgttgctaatggttctaaggcacaatttactggtattggtcaagcttctcctctgccatctctatcattgaattatgtgttatt 37980655  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 45187300 - 45187213
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatt 294  Q
    |||| |||||||||| ||||||||| || ||||||||||||||| ||||||| ||| |  |||||||||| ||| |||| ||||||||    
T  45187300 ttactgttgctaatggttctaaggcacaagttactggtattggtcaagcttctcctctgccatctctatcattgaattaggtgttatt 45187213  T

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Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 8983475 - 8983583
Alignment:
Q  252 aagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctgccccttcaatatgatttcaatcattaagcttacatgttctctcaa 351  Q
    |||||||||||||  ||||||||||||| |||||  |||||||||| || |  ||||||||  || |||||||||||  ||| ||||| | |||||||||    
T  8983475 aagcttcacctttgccatctctatccttagattacatgttatttgtacctgagtgcccctttgatttgatttcaatctgtaaacttacttattctctcaa 8983574  T
Q  352 tcgttccat 360  Q
    | |||||||    
T  8983575 ttgttccat 8983583  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 294
Target Start/End: Complemental strand, 42360204 - 42360124
Alignment:
Q  214 tgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatt 294  Q
    |||||||| || |||||| || ||||||||||||||| ||||||| ||| |  |||||||||| ||| |||||||||||||    
T  42360204 tgctaatggttataaggcacaagttactggtattggtcaagcttctcctctgccatctctatcattgaattatgtgttatt 42360124  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 372
Target Start/End: Original strand, 6997934 - 6998093
Alignment:
Q  213 ttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctgcccctt 312  Q
    ||||||||| ||||||||| || ||||||||||||||| | || |||||| |  |||||||||| ||| | ||||| |||||||| || ||  | || ||    
T  6997934 ttgctaatggttctaaggcacaagttactggtattggtcaggcctcacctctgccatctctatcattgaactatgttttatttgtacctggtcgtccttt 6998033  T
Q  313 caatatgatttcaatcattaagcttacatgttctctcaatcgttccataacatttacttc 372  Q
     ||| |||| ||||| | |||||||||    ||||||||| ||| |||||||||| ||||    
T  6998034 taatttgatatcaattagtaagcttactgactctctcaattgttgcataacattttcttc 6998093  T

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Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 372
Target Start/End: Complemental strand, 44266256 - 44266093
Alignment:
Q  207 ttaccgttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgttatttgtccccggctg 306  Q
    ||||| ||||||||| ||||||||| || ||||||||||||||| | || |||||| |  |||||||||  ||| ||  |||||||||||| || || ||    
T  44266256 ttacccttgctaatggttctaaggcacaagttactggtattggtcaggcctcacctctgccatctctattattgaat--tgtgttatttgtacctggttg 44266159  T
Q  307 ccccttcaatatgatttcaatcattaagcttacatg-ttctctcaatcgttccataacatttacttc 372  Q
     || || |||  ||| ||||||| |||||||| |||  ||||||||| |||||||||||||| ||||    
T  44266158 tccttttaattcgatatcaatcagtaagctta-atgactctctcaattgttccataacattttcttc 44266093  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Original strand, 35023526 - 35023605
Alignment:
Q  213 ttgctaatgattctaaggcgcaggttactggtattggtaaagcttcacctttttcatctctatccttggattatgtgtta 292  Q
    ||||||||| ||| ||||| || ||||||||||||||| ||| ||||||||| |||||||||||  || |||||||||||    
T  35023526 ttgctaatggttccaaggcacaagttactggtattggtcaagtttcacctttgtcatctctatctctgaattatgtgtta 35023605  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 19825048 - 19824981
Alignment:
Q  40 caagaggtttcaacttcagtcacaatggctcatgtaagtaattcaacagttttccagtctcactctat 107  Q
    |||||||||||||| ||||||||| |||||||| | |||||||| ||||||| ||  |||||||||||    
T  19825048 caagaggtttcaacgtcagtcacattggctcatttcagtaattctacagtttgcctatctcactctat 19824981  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 52982076 - 52982024
Alignment:
Q  243 gtattggtaaagcttcacctttttcatctctatccttggattatgtgttattt 295  Q
    |||||||| ||||||||||| |  ||||| |||||||| ||||||||||||||    
T  52982076 gtattggtcaagcttcacctctgccatctttatccttgaattatgtgttattt 52982024  T

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