View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13702_low_8 (Length: 387)

Name: NF13702_low_8
Description: NF13702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13702_low_8
NF13702_low_8
[»] chr6 (17 HSPs)
chr6 (1-258)||(24210628-24210879)
chr6 (279-372)||(24210867-24210960)
chr6 (1-60)||(33647060-33647119)
chr6 (1-60)||(21627985-21628044)
chr6 (1-60)||(33517631-33517690)
chr6 (1-63)||(11392935-11392997)
chr6 (1-56)||(12080733-12080788)
chr6 (1-60)||(30725856-30725915)
chr6 (1-60)||(30803958-30804017)
chr6 (28-60)||(14196739-14196771)
chr6 (28-63)||(362994-363029)
chr6 (1-60)||(3059354-3059413)
chr6 (28-63)||(21627837-21627872)
chr6 (28-60)||(17734320-17734352)
chr6 (28-60)||(28000509-28000541)
chr6 (28-60)||(30804133-30804165)
chr6 (28-60)||(33517806-33517838)
[»] chr2 (22 HSPs)
chr2 (1-63)||(36755190-36755252)
chr2 (1-63)||(37895616-37895678)
chr2 (1-63)||(44714030-44714092)
chr2 (6-63)||(34447914-34447971)
chr2 (3-50)||(11721372-11721419)
chr2 (1-56)||(15848185-15848240)
chr2 (1-60)||(36382258-36382317)
chr2 (1-60)||(39423612-39423671)
chr2 (1-63)||(2318255-2318317)
chr2 (1-63)||(22051263-22051324)
chr2 (1-63)||(36479815-36479877)
chr2 (1-60)||(10712820-10712879)
chr2 (1-50)||(10840573-10840622)
chr2 (28-60)||(1695864-1695896)
chr2 (28-60)||(6658119-6658151)
chr2 (28-60)||(10712995-10713027)
chr2 (28-60)||(11163178-11163210)
chr2 (28-60)||(13995797-13995829)
chr2 (28-60)||(15848360-15848392)
chr2 (28-60)||(16099296-16099328)
chr2 (28-60)||(33062174-33062206)
chr2 (28-60)||(34448067-34448099)
[»] chr7 (24 HSPs)
chr7 (1-60)||(2640450-2640509)
chr7 (1-57)||(32053418-32053474)
chr7 (1-63)||(42731516-42731578)
chr7 (1-60)||(23181266-23181325)
chr7 (1-60)||(28469280-28469339)
chr7 (1-60)||(37656949-37657008)
chr7 (1-60)||(40379866-40379925)
chr7 (1-60)||(42019869-42019928)
chr7 (1-60)||(10935891-10935950)
chr7 (1-60)||(27396867-27396926)
chr7 (28-65)||(17203693-17203730)
chr7 (3-60)||(24388918-24388975)
chr7 (1-61)||(3914235-3914295)
chr7 (28-63)||(6253709-6253744)
chr7 (1-55)||(45010695-45010749)
chr7 (1-43)||(45010893-45010935)
chr7 (1-50)||(38643647-38643696)
chr7 (28-60)||(19204730-19204762)
chr7 (28-60)||(22871432-22871464)
chr7 (28-60)||(27991980-27992012)
chr7 (28-60)||(30948284-30948316)
chr7 (28-60)||(32680719-32680751)
chr7 (28-60)||(34928774-34928806)
chr7 (28-60)||(39686658-39686690)
[»] chr3 (19 HSPs)
chr3 (1-60)||(43384380-43384439)
chr3 (1-57)||(26463873-26463929)
chr3 (1-60)||(9294230-9294289)
chr3 (1-60)||(23458251-23458310)
chr3 (1-60)||(33689651-33689710)
chr3 (1-60)||(40758241-40758300)
chr3 (1-56)||(40506063-40506118)
chr3 (1-54)||(41988059-41988112)
chr3 (1-60)||(33156266-33156325)
chr3 (1-56)||(39399368-39399423)
chr3 (1-56)||(54317907-54317962)
chr3 (28-60)||(8041857-8041889)
chr3 (28-60)||(23458103-23458135)
chr3 (28-60)||(36314422-36314454)
chr3 (1-60)||(42854532-42854589)
chr3 (28-60)||(48322501-48322533)
chr3 (1-45)||(51994173-51994217)
chr3 (28-60)||(54466664-54466696)
chr3 (28-60)||(55052403-55052435)
[»] chr8 (24 HSPs)
chr8 (1-63)||(36928573-36928635)
chr8 (1-60)||(13186157-13186216)
chr8 (1-60)||(16388798-16388857)
chr8 (1-60)||(4405932-4405991)
chr8 (1-60)||(31608785-31608844)
chr8 (1-60)||(35756679-35756738)
chr8 (28-63)||(34685527-34685562)
chr8 (1-60)||(39071773-39071832)
chr8 (1-63)||(36186336-36186398)
chr8 (28-60)||(12199074-12199106)
chr8 (28-60)||(12443502-12443534)
chr8 (28-60)||(38955944-38955976)
chr8 (28-63)||(4405786-4405821)
chr8 (1-60)||(4994929-4994988)
chr8 (3-50)||(24085873-24085920)
chr8 (1-60)||(40318236-40318295)
chr8 (28-60)||(3041580-3041612)
chr8 (28-60)||(11674935-11674967)
chr8 (28-60)||(13186331-13186363)
chr8 (1-41)||(23698535-23698575)
chr8 (28-60)||(36928748-36928780)
chr8 (28-60)||(38845423-38845455)
chr8 (28-60)||(40775774-40775806)
chr8 (28-60)||(44406981-44407013)
[»] chr5 (32 HSPs)
chr5 (1-63)||(29646631-29646693)
chr5 (1-63)||(32242339-32242401)
chr5 (1-60)||(11047534-11047593)
chr5 (1-60)||(13962961-13963020)
chr5 (1-63)||(5993986-5994048)
chr5 (1-60)||(19892580-19892639)
chr5 (1-60)||(39453397-39453456)
chr5 (1-59)||(8322501-8322559)
chr5 (1-59)||(12904851-12904909)
chr5 (1-63)||(17202496-17202558)
chr5 (1-63)||(35512245-35512307)
chr5 (1-60)||(13362500-13362559)
chr5 (1-60)||(14194695-14194754)
chr5 (1-60)||(38442165-38442224)
chr5 (1-63)||(5024287-5024349)
chr5 (1-62)||(20840630-20840691)
chr5 (4-60)||(27937291-27937347)
chr5 (1-60)||(186516-186575)
chr5 (28-63)||(6301667-6301702)
chr5 (1-60)||(10684036-10684095)
chr5 (1-60)||(18247181-18247240)
chr5 (1-63)||(20814404-20814466)
chr5 (1-58)||(16157129-16157186)
chr5 (28-60)||(1506208-1506240)
chr5 (28-60)||(5024143-5024175)
chr5 (28-60)||(6301815-6301847)
chr5 (28-60)||(6757989-6758021)
chr5 (28-60)||(13362351-13362383)
chr5 (28-60)||(28770993-28771025)
chr5 (28-60)||(31482526-31482558)
chr5 (28-60)||(32242514-32242546)
chr5 (28-60)||(38475157-38475189)
[»] chr1 (37 HSPs)
chr1 (1-63)||(6367659-6367721)
chr1 (1-60)||(14879068-14879127)
chr1 (1-60)||(37578464-37578523)
chr1 (1-60)||(46163127-46163186)
chr1 (1-56)||(1103558-1103613)
chr1 (1-60)||(4960637-4960696)
chr1 (1-60)||(13914339-13914398)
chr1 (1-60)||(24009813-24009872)
chr1 (1-60)||(32917357-32917416)
chr1 (1-60)||(40210642-40210701)
chr1 (1-63)||(1841556-1841618)
chr1 (1-63)||(34464718-34464780)
chr1 (1-56)||(17662126-17662181)
chr1 (1-60)||(43758919-43758978)
chr1 (1-63)||(35152440-35152502)
chr1 (28-60)||(7821226-7821258)
chr1 (28-60)||(28011609-28011641)
chr1 (28-63)||(1841728-1841763)
chr1 (3-50)||(13245949-13245996)
chr1 (28-63)||(26024661-26024696)
chr1 (1-60)||(30711424-30711483)
chr1 (1-52)||(42248570-42248621)
chr1 (1-63)||(19017898-19017960)
chr1 (17-63)||(48779230-48779276)
chr1 (1-50)||(42267400-42267449)
chr1 (28-60)||(183345-183377)
chr1 (28-60)||(4716592-4716624)
chr1 (1-41)||(4716728-4716768)
chr1 (28-60)||(6367834-6367866)
chr1 (28-60)||(7821078-7821110)
chr1 (28-60)||(19017753-19017785)
chr1 (28-60)||(24905291-24905323)
chr1 (28-60)||(31514442-31514474)
chr1 (28-60)||(33442718-33442750)
chr1 (1-45)||(34849108-34849152)
chr1 (28-60)||(41099005-41099037)
chr1 (28-60)||(52134309-52134341)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-60)||(37835-37894)
[»] chr4 (31 HSPs)
chr4 (1-60)||(14801833-14801892)
chr4 (1-60)||(15507945-15508004)
chr4 (1-60)||(35028270-35028329)
chr4 (1-55)||(17356199-17356253)
chr4 (1-63)||(37976422-37976484)
chr4 (2-63)||(53129775-53129836)
chr4 (1-60)||(34765652-34765711)
chr4 (1-60)||(53701909-53701968)
chr4 (1-60)||(54086967-54087026)
chr4 (1-60)||(35508512-35508571)
chr4 (1-47)||(52298123-52298169)
chr4 (28-60)||(9400643-9400675)
chr4 (1-65)||(24349771-24349835)
chr4 (28-60)||(34765504-34765536)
chr4 (1-56)||(10781760-10781815)
chr4 (1-60)||(16605699-16605758)
chr4 (28-63)||(50418792-50418827)
chr4 (1-56)||(52909350-52909405)
chr4 (28-60)||(7452075-7452107)
chr4 (28-60)||(9144890-9144922)
chr4 (28-60)||(15507797-15507829)
chr4 (28-60)||(16006079-16006111)
chr4 (28-60)||(17356049-17356081)
chr4 (1-41)||(18831446-18831486)
chr4 (1-41)||(32950239-32950279)
chr4 (28-60)||(33247397-33247429)
chr4 (28-60)||(34837198-34837230)
chr4 (28-60)||(42738155-42738187)
chr4 (28-60)||(44967193-44967225)
chr4 (28-60)||(46661186-46661218)
chr4 (1-41)||(50418928-50418968)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-59)||(69062-69120)
[»] scaffold0295 (1 HSPs)
scaffold0295 (1-60)||(2240-2299)
[»] scaffold0024 (1 HSPs)
scaffold0024 (28-63)||(141718-141753)
[»] scaffold0559 (1 HSPs)
scaffold0559 (28-60)||(1474-1506)
[»] scaffold0075 (1 HSPs)
scaffold0075 (28-60)||(14553-14585)


Alignment Details
Target: chr6 (Bit Score: 148; Significance: 5e-78; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 24210628 - 24210879
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgacacttcttttttaatttataatttgcaaacatcagcaaa 100  Q
    |||||||||||| || |||||||||||||||||| | |||||||||||||||||||| ||  |||||||||| |||||||||||||||||||||| ||||    
T  24210628 atttaaaatttcatccctctccccgcctaatcaccgccacgtcactaatttgatgacatggaacttctttttaaatttataatttgcaaacatcaacaaa 24210727  T
Q  101 atacaattgaagtagagaaatcagtttacttgctgattagttcgggagttaagatcaaaacatgatttgggttgtaactcctcaaagnnnnnnnnnnnnn 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||                 
T  24210728 atacaattgaagtagagaaatcactttacttgctgattagttcgggagttaagatcaaaacatgatttcggtcgtaacttctcaaag------aaaaaaa 24210821  T
Q  201 nngaggttcatgttaaaccaaaagagagagaatcaccaatataaacggttcaaaagat 258  Q
      ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24210822 aagaggttcatgttaaaacaaacgagagagaatcaccaatataaacggttcaaaagat 24210879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 279 - 372
Target Start/End: Original strand, 24210867 - 24210960
Alignment:
Q  279 cggttcaaaagatgtaatatatgttttttgacgtcattgcaacaattcttactttctaataggtaaacatgttttatcggccatcgcttgaact 372  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24210867 cggttcaaaagatgtaatatatgttttttgacatcattgcaacaattcttaatttctaataggtaaacatgttttatcggccatcgcttgaact 24210960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33647060 - 33647119
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||    
T  33647060 atttaaaatttcgtctctctccccatttaatcactgccacgtcactaatttgatgacgtg 33647119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21628044 - 21627985
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||| ||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  21628044 atttaaaattttgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 21627985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33517631 - 33517690
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | |||||||||  ||||||||||||||||||||||    
T  33517631 atttaaaatttcgtccctctccccacttaatcactgctacgtcactaatttgatgacgtg 33517690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11392935 - 11392997
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    |||||||||||||||| ||||||  | ||||||||| || |||||||||||||||||||||||    
T  11392935 atttaaaatttcgtctatctcccaacttaatcactgccatgtcactaatttgatgacgtgaca 11392997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12080733 - 12080788
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    ||||||||||||||| |||||||| | ||||||||| || ||||||||||||||||    
T  12080733 atttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatga 12080788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30725856 - 30725915
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| ||||||||   ||||||||| || ||||||||||||||||||||    
T  30725856 atttaaaatttcgtccctctccccatttaatcactgccatgtcactaatttgatgacgtg 30725915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30803958 - 30804017
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| ||  |||||||||||||||||||    
T  30803958 atttaaaatttcgtccctctccccacttaatcactgccatctcactaatttgatgacgtg 30804017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 14196739 - 14196771
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||||||||||||    
T  14196739 taatcactgtcacgtcactaatttgatgacgtg 14196771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 362994 - 363029
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||| ||||||||||||||||||||||||||    
T  362994 taatcactgccacgtcactaatttgatgacgtgaca 363029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3059354 - 3059413
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||| | | ||||||||| || ||||||||| ||||||||||    
T  3059354 atttaaaatttcgtccctctcctcacttaatcactgccatgtcactaatgtgatgacgtg 3059413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 21627837 - 21627872
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||| ||||||||||||||||||||||||||    
T  21627837 taatcactgccacgtcactaatttgatgacgtgaca 21627872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 17734320 - 17734352
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  17734320 taatcactgccacgtcactaatttgatgacgtg 17734352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 28000509 - 28000541
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  28000509 taatcactgccacgtcactaatttgatgacgtg 28000541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 30804165 - 30804133
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  30804165 taatcactgccacgtcactaatttgatgacgtg 30804133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 33517838 - 33517806
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  33517838 taatcactgccacgtcactaatttgatgacgtg 33517806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36755190 - 36755252
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  36755190 atttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatttgatgacgtgaca 36755252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37895678 - 37895616
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||    
T  37895678 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgaca 37895616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44714092 - 44714030
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| || |||||||||||||||||||||||    
T  44714092 atttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtgaca 44714030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 34447914 - 34447971
Alignment:
Q  6 aaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||||||| | ||||||||| ||| ||||||||||||||||||||||    
T  34447914 aaatttcgtctctctccccacttaatcactgccacatcactaatttgatgacgtgaca 34447971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 11721419 - 11721372
Alignment:
Q  3 ttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatt 50  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||    
T  11721419 ttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatt 11721372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15848185 - 15848240
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||    
T  15848185 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatga 15848240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36382258 - 36382317
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||| || |||||||| | ||||||||| |||||||||||||||||||||||    
T  36382258 atttaaaatttcatccctctccccacttaatcactgccacgtcactaatttgatgacgtg 36382317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39423612 - 39423671
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| || ||||||||||||||||||||    
T  39423612 atttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtg 39423671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2318255 - 2318317
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | |||| | || ||||||||||||||||||||||||||    
T  2318255 atttaaaatttcgtccctctccccacttaattaatgccacgtcactaatttgatgacgtgaca 2318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22051324 - 22051263
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    |||||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||||||||    
T  22051324 atttaaaatttcgtctctctccca-cctaatcactgccatatcactaatttgatgacgtgaca 22051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36479815 - 36479877
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    |||||||||||||||  ||||||| | ||||||||| || |||||||||||||||||||||||    
T  36479815 atttaaaatttcgtccatctccccacttaatcactgccatgtcactaatttgatgacgtgaca 36479877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10712820 - 10712879
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||| || |||||||| | ||||||||  |||||||||||||||||||||||    
T  10712820 atttaaaatttcatccctctccccacttaatcactaccacgtcactaatttgatgacgtg 10712879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10840573 - 10840622
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatt 50  Q
    ||||||| ||||||| |||| ||| | |||||||||||||||||||||||    
T  10840573 atttaaactttcgtccctcttcccacttaatcactgtcacgtcactaatt 10840622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 1695864 - 1695896
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  1695864 taatcactgccacgtcactaatttgatgacgtg 1695896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 6658151 - 6658119
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  6658151 taatcactgccacgtcactaatttgatgacgtg 6658119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 10713027 - 10712995
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  10713027 taatcactgccacgtcactaatttgatgacgtg 10712995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 11163178 - 11163210
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  11163178 taatcactgccacgtcactaatttgatgacgtg 11163210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 13995797 - 13995829
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  13995797 taatcactgccacgtcactaatttgatgacgtg 13995829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 15848392 - 15848360
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  15848392 taatcactgccacgtcactaatttgatgacgtg 15848360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 16099328 - 16099296
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  16099328 taatcactgccacgtcactaatttgatgacgtg 16099296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 33062174 - 33062206
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  33062174 taatcactgccacgtcactaatttgatgacgtg 33062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 34448099 - 34448067
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  34448099 taatcactgccacgtcactaatttgatgacgtg 34448067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2640509 - 2640450
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  2640509 atttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtg 2640450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32053474 - 32053418
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgac 57  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  32053474 atttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatttgatgac 32053418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42731516 - 42731578
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| || |||||||||||||||||||||||    
T  42731516 atttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtgaca 42731578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23181325 - 23181266
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| ||||| || | |||||||||||| ||||||||||||||||||||    
T  23181325 atttaaaatttcgtccctctctccacttaatcactgtcatgtcactaatttgatgacgtg 23181266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28469339 - 28469280
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||  |||||||||||||||||||||||    
T  28469339 atttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtg 28469280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37656949 - 37657008
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||| | |||||||||||||||||||||||    
T  37656949 atttaaaatttcgtccctctccccacttaatcaccggcacgtcactaatttgatgacgtg 37657008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40379866 - 40379925
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | |||||| || |||||||||||||||||||||||    
T  40379866 atttaaaatttcgtccctctccccacttaatcaatgccacgtcactaatttgatgacgtg 40379925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42019928 - 42019869
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||| | | ||||||||| || ||||||||||||||||||||    
T  42019928 atttaaaatttcgtctctctcctcacttaatcactgccatgtcactaatttgatgacgtg 42019869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10935891 - 10935950
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| ||||| || | ||||||||| || ||||||||||||||||||||    
T  10935891 atttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtg 10935950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27396926 - 27396867
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||  ||||||||||||||    
T  27396926 atttaaaatttcgtccctctccccacttaatcactgccacgtcaagaatttgatgacgtg 27396867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 17203693 - 17203730
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgacact 65  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17203693 taatcactgtcacgtcagtaatttgatgacgtgacact 17203730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 24388918 - 24388975
Alignment:
Q  3 ttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||| |||||||| | ||||||||| ||| |||| ||||||||||||||    
T  24388918 ttaaaatttcgtccctctccccacttaatcactgccacatcaccaatttgatgacgtg 24388975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3914235 - 3914295
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtga 61  Q
    ||||||||||||||| |||| ||  | ||||||||| ||| ||||||||||||||||||||    
T  3914235 atttaaaatttcgtccctcttccaacttaatcactgccacatcactaatttgatgacgtga 3914295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 6253744 - 6253709
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  6253744 taatcactgtcacgtcactaatttgatgacatgaca 6253709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45010695 - 45010749
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatg 55  Q
    |||||||||||||||  ||||||| | ||||||||| || |||||||||||||||    
T  45010695 atttaaaatttcgtccatctccccacttaatcactgccaagtcactaatttgatg 45010749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45010935 - 45010893
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtc 43  Q
    |||||||||||||||||||||||| | ||||||||| ||||||    
T  45010935 atttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38643647 - 38643696
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatt 50  Q
    |||||| |||||||| |||||||| | |||| ||||||||||||||||||    
T  38643647 atttaagatttcgtccctctccccacttaattactgtcacgtcactaatt 38643696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 19204762 - 19204730
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  19204762 taatcactgccacgtcactaatttgatgacgtg 19204730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 22871432 - 22871464
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  22871432 taatcactgccacgtcactaatttgatgacgtg 22871464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 27992012 - 27991980
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  27992012 taatcactgccacgtcactaatttgatgacgtg 27991980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 30948284 - 30948316
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  30948284 taatcactgccacgtcactaatttgatgacgtg 30948316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 32680719 - 32680751
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  32680719 taatcactgccacgtcactaatttgatgacgtg 32680751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 34928774 - 34928806
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  34928774 taatcactgccacgtcactaatttgatgacgtg 34928806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 39686658 - 39686690
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  39686658 taatcactgccacgtcactaatttgatgacgtg 39686690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43384380 - 43384439
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  43384380 atttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatgacgtg 43384439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26463929 - 26463873
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgac 57  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  26463929 atttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatttgatgac 26463873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9294289 - 9294230
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  9294289 atttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtg 9294230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23458310 - 23458251
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| ||| |||||||||||||||||||    
T  23458310 atttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtg 23458251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33689710 - 33689651
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||||||| |||||||||    
T  33689710 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaattcgatgacgtg 33689651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40758241 - 40758300
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||  |||||||||||||||||||||||    
T  40758241 atttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtg 40758300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40506118 - 40506063
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    |||||||||||||||||||||| | | |||||||||||| || |||||||||||||    
T  40506118 atttaaaatttcgtctctctccgcacttaatcactgtcatgtaactaatttgatga 40506063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41988059 - 41988112
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgat 54  Q
    |||||||||||||||||||||| | | ||||||||| ||| |||||||||||||    
T  41988059 atttaaaatttcgtctctctcctcacttaatcactgccacatcactaatttgat 41988112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33156325 - 33156266
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| ||| |||| | ||||||||| ||||||||||||| | |||||||    
T  33156325 atttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtg 33156266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39399423 - 39399368
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    |||||||||||| |||||||||||   ||||||||| |||||||||||| ||||||    
T  39399423 atttaaaatttcatctctctccccagttaatcactgccacgtcactaatctgatga 39399368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 54317962 - 54317907
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    |||||||||||||||||||||||    ||||||||| |||||||||||| ||||||    
T  54317962 atttaaaatttcgtctctctccctaattaatcactgccacgtcactaatctgatga 54317907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 8041889 - 8041857
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  8041889 taatcactgccacgtcactaatttgatgacgtg 8041857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 23458103 - 23458135
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  23458103 taatcactgccacgtcactaatttgatgacgtg 23458135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 36314422 - 36314454
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  36314422 taatcactgccacgtcactaatttgatgacgtg 36314454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42854532 - 42854589
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||||||||  || | ||||||||| ||| ||| |||||||||||||||    
T  42854532 atttaaaatttcgtctctct--ccacttaatcactgccacctcagtaatttgatgacgtg 42854589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 48322501 - 48322533
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  48322501 taatcactgccacgtcactaatttgatgacgtg 48322533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51994217 - 51994173
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcac 45  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||    
T  51994217 atttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 54466696 - 54466664
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  54466696 taatcactgccacgtcactaatttgatgacgtg 54466664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 55052403 - 55052435
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  55052403 taatcactgccacgtcactaatttgatgacgtg 55052435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36928573 - 36928635
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||    
T  36928573 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgaca 36928635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13186157 - 13186216
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||    
T  13186157 atttaaaatttcgtctctctccccacttaatcactgccacgtcactaatttaatgacgtg 13186216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16388857 - 16388798
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  16388857 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 16388798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4405991 - 4405932
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||| ||| | |||||||||||||||||||||||||| ||||||    
T  4405991 atttaaaatttcgtccctcttcccacttaatcactgtcacgtcactaatttgaagacgtg 4405932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31608844 - 31608785
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||| ||||    
T  31608844 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatggcgtg 31608785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35756679 - 35756738
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| || ||||||||||||||||||||    
T  35756679 atttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtg 35756738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 34685562 - 34685527
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  34685562 taatcactgtcacgtcactaatttgatgacgtgaca 34685527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39071773 - 39071832
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| | |||||||||||||| ||||||    
T  39071773 atttaaaatttcgtccctctccccacttaatcactgccgcgtcactaatttgacgacgtg 39071832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36186398 - 36186336
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||  | ||||||||| ||| | ||||||||||||||||||||    
T  36186398 atttaaaatttcgtccctctccctacttaatcactgccacattactaatttgatgacgtgaca 36186336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 12199074 - 12199106
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||||||||||||    
T  12199074 taatcactgtcacgtcactaatttgatgacgtg 12199106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 12443502 - 12443534
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||||||||||||    
T  12443502 taatcactgtcacgtcactaatttgatgacgtg 12443534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 38955976 - 38955944
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||||||||||||    
T  38955976 taatcactgtcacgtcactaatttgatgacgtg 38955944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 4405786 - 4405821
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    |||||||||||||||||||||||||||||| |||||    
T  4405786 taatcactgtcacgtcactaatttgatgacatgaca 4405821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4994988 - 4994929
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||| |||||||||| |||||||| | |||||  ||||| ||||||||||||||||||||    
T  4994988 atttcaaatttcgtccctctccccacttaatccatgtcatgtcactaatttgatgacgtg 4994929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 24085873 - 24085920
Alignment:
Q  3 ttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatt 50  Q
    ||||||||| ||| |||||||| | |||||||||||||||||||||||    
T  24085873 ttaaaattttgtccctctccccacttaatcactgtcacgtcactaatt 24085920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40318295 - 40318236
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||  ||||| | | ||||||||| || ||||||||||||||||||||    
T  40318295 atttaaaatttcgtccttctcctcacttaatcactgccatgtcactaatttgatgacgtg 40318236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 3041580 - 3041612
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  3041580 taatcactgccacgtcactaatttgatgacgtg 3041612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 11674967 - 11674935
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  11674967 taatcactgccacgtcactaatttgatgacgtg 11674935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 13186363 - 13186331
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  13186363 taatcactgccacgtcactaatttgatgacgtg 13186331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23698575 - 23698535
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacg 41  Q
    ||||||||||||||| |||||||| | ||||||||||||||    
T  23698575 atttaaaatttcgtccctctccccacttaatcactgtcacg 23698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 36928780 - 36928748
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  36928780 taatcactgccacgtcactaatttgatgacgtg 36928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 38845423 - 38845455
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  38845423 taatcactgccacgtcactaatttgatgacgtg 38845455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 40775774 - 40775806
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  40775774 taatcactgccacgtcactaatttgatgacgtg 40775806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 44406981 - 44407013
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  44406981 taatcactgccacgtcactaatttgatgacgtg 44407013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29646693 - 29646631
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||||    
T  29646693 atttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtgaca 29646631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32242339 - 32242401
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||    
T  32242339 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgaca 32242401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11047534 - 11047593
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||    
T  11047534 atttaaaatttcgtctctctccccacttaatcactgccatgtcactaatttgatgacgtg 11047593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13962961 - 13963020
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||    
T  13962961 atttaaaatttcgtccctctcctcacttaatcactgtcacgtcactaatttgatgacgtg 13963020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5993986 - 5994048
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| || |||||||||||||||||||||||    
T  5993986 atttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtgaca 5994048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19892639 - 19892580
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||  ||||||| | ||||||||| |||||||||||||||||||||||    
T  19892639 atttaaaatttcgtcattctccccacttaatcactgccacgtcactaatttgatgacgtg 19892580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39453397 - 39453456
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| || ||||||||||||||||||||    
T  39453397 atttaaaatttcgtccctctccccacttaatcactggcatgtcactaatttgatgacgtg 39453456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8322501 - 8322559
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgt 59  Q
    ||||||||||||||| |||||||| | ||||||||||||  ||||||||||||||||||    
T  8322501 atttaaaatttcgtccctctccccacttaatcactgtcatttcactaatttgatgacgt 8322559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12904851 - 12904909
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgt 59  Q
    ||||||||||||||| |||||||| | |||||| |||||||||||||||||||| ||||    
T  12904851 atttaaaatttcgtccctctccccacttaatcaatgtcacgtcactaatttgataacgt 12904909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17202496 - 17202558
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| | |||||| | ||||||||| || |||||||||||||||||||||||    
T  17202496 atttaaaatttcgtccccctccccacttaatcactgccatgtcactaatttgatgacgtgaca 17202558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35512245 - 35512307
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| ||| |||||||||||||||| |||||    
T  35512245 atttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacatgaca 35512307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13362559 - 13362500
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||| |||||||||||| | |||||||||  || |||||||||||||||||||    
T  13362559 atttaaaatttagtctctctccccacttaatcactgctacatcactaatttgatgacgtg 13362500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14194754 - 14194695
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | |||||||||  | ||||||||||||||||||||    
T  14194754 atttaaaatttcgtccctctccccacttaatcactgctatgtcactaatttgatgacgtg 14194695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38442165 - 38442224
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| ||| | |||||||||||||||||    
T  38442165 atttaaaatttcgtccctctccccacttaatcactgccacataactaatttgatgacgtg 38442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5024349 - 5024287
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||  |||||||| | ||||||||| ||| ||||||||||||||||| ||||    
T  5024349 atttaaaatttcgttcctctccccacttaatcactgccacatcactaatttgatgacgcgaca 5024287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20840630 - 20840691
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgac 62  Q
    ||||||||||| ||| |||||||| | ||||||||| ||||||||||||| ||| |||||||    
T  20840630 atttaaaattttgtccctctccccacttaatcactgccacgtcactaattcgatcacgtgac 20840691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 27937347 - 27937291
Alignment:
Q  4 taaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||| ||| |||||||| |  |||||||| |||||||||||||||||||||||    
T  27937347 taaaattttgtccctctccccactaaatcactgccacgtcactaatttgatgacgtg 27937291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 186516 - 186575
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| ||| |||| | ||||||||  || ||||||||||||||||||||    
T  186516 atttaaaatttcgtccctccccccacttaatcactaccatgtcactaatttgatgacgtg 186575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 6301667 - 6301702
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6301667 taatcactgccacgtcactaatttgatgacgtgaca 6301702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10684036 - 10684095
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||| ||| || ||| | | |||||||||||| ||||||||||||||||||||    
T  10684036 atttaaaattttgtcactttcctcacttaatcactgtcatgtcactaatttgatgacgtg 10684095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18247181 - 18247240
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||| ||||||||| |||||||| | ||||||| | || ||||||||||||||||||||    
T  18247181 atttagaatttcgtccctctccccacttaatcaccgccatgtcactaatttgatgacgtg 18247240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20814466 - 20814404
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||| ||| |||||||  | ||||||||| || ||||||||||||||||| |||||    
T  20814466 atttaaaattttgtccctctccctacttaatcactgccatgtcactaatttgatgacatgaca 20814404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16157186 - 16157129
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacg 58  Q
    ||||||||||| ||| |||||||| | ||||| ||| || ||||||||||||||||||    
T  16157186 atttaaaattttgtccctctccccacttaatccctgccatgtcactaatttgatgacg 16157129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 1506240 - 1506208
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  1506240 taatcactgccacgtcactaatttgatgacgtg 1506208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 5024143 - 5024175
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  5024143 taatcactgccacgtcactaatttgatgacgtg 5024175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 6301847 - 6301815
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  6301847 taatcactgccacgtcactaatttgatgacgtg 6301815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 6757989 - 6758021
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  6757989 taatcactgccacgtcactaatttgatgacgtg 6758021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 13362351 - 13362383
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  13362351 taatcactgccacgtcactaatttgatgacgtg 13362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 28770993 - 28771025
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  28770993 taatcactgccacgtcactaatttgatgacgtg 28771025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 31482526 - 31482558
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  31482526 taatcactgccacgtcactaatttgatgacgtg 31482558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 32242546 - 32242514
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  32242546 taatcactgccacgtcactaatttgatgacgtg 32242514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 38475157 - 38475189
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  38475157 taatcactgccacgtcactaatttgatgacgtg 38475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6367659 - 6367721
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||    
T  6367659 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgaca 6367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14879068 - 14879127
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  14879068 atttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgacgtg 14879127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37578523 - 37578464
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  37578523 atttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtg 37578464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 46163127 - 46163186
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||| | |||| ||||||| ||||||||||||||||||||    
T  46163127 atttaaaatttcgtctctctccccacttaattactgtcatgtcactaatttgatgacgtg 46163186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1103558 - 1103613
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    ||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||    
T  1103558 atttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatga 1103613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4960637 - 4960696
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||| ||| | ||||||||| |||||||||||||||||||||||    
T  4960637 atttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttgatgacgtg 4960696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13914398 - 13914339
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| |  |||||||| |||||||||||||||||||||||    
T  13914398 atttaaaatttcgtccctctccccactaaatcactgccacgtcactaatttgatgacgtg 13914339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24009872 - 24009813
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| ||| |||||||||||||||||||    
T  24009872 atttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtg 24009813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32917357 - 32917416
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||| | ||||||||| ||| |||||||||||| ||||||    
T  32917357 atttaaaatttcgtctctctccccacttaatcactgccacatcactaatttgacgacgtg 32917416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40210701 - 40210642
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||||| |||||||||||    
T  40210701 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaaattgatgacgtg 40210642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1841556 - 1841618
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| || |||||||||||||||| ||||||    
T  1841556 atttaaaatttcgtcactctccccacttaatcactgccatgtcactaatttgatgatgtgaca 1841618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34464780 - 34464718
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||| ||| |||||||| | ||||||||| || |||||||||||||||||||||||    
T  34464780 atttaaaattttgtccctctccccacttaatcactgccatgtcactaatttgatgacgtgaca 34464718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17662181 - 17662126
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    ||||||||||||||| |||| ||| | ||||||||| |||||||||||||||||||    
T  17662181 atttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttgatga 17662126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43758919 - 43758978
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| ||||| || | ||||||||| || ||||||||||||||||||||    
T  43758919 atttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgacgtg 43758978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35152440 - 35152502
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||| ||| |||||||| | |||||||||  | |||||||||||||||||||||||    
T  35152440 atttaaaattttgtccctctccccacttaatcactgcaatgtcactaatttgatgacgtgaca 35152502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 7821258 - 7821226
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||||||||||||    
T  7821258 taatcactgtcacgtcactaatttgatgacgtg 7821226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 28011641 - 28011609
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||||||||||||    
T  28011641 taatcactgtcacgtcactaatttgatgacgtg 28011609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 1841763 - 1841728
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1841763 taatcactgccacgtcactaatttgatgacgtgaca 1841728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 13245949 - 13245996
Alignment:
Q  3 ttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatt 50  Q
    ||||||||| ||| |||||||| | |||||||||||||||||||||||    
T  13245949 ttaaaattttgtccctctccccacttaatcactgtcacgtcactaatt 13245996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 26024696 - 26024661
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||| ||||||||||||||||||||||||||    
T  26024696 taatcactgccacgtcactaatttgatgacgtgaca 26024661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30711424 - 30711483
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| ||| |||| | ||||||||| || ||||||||||||| ||||||    
T  30711424 atttaaaatttcgtccctcgccccacttaatcactgccatgtcactaatttgacgacgtg 30711483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42248570 - 42248621
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttg 52  Q
    ||||||||||||||| |||||||| | ||||||||| ||||| |||||||||    
T  42248570 atttaaaatttcgtccctctccccacttaatcactgccacgtgactaatttg 42248621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19017960 - 19017898
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||| ||| |||| ||| | ||||||||| | | ||||||||||||||||||||||    
T  19017960 atttaaaattttgtccctcttcccacttaatcactgccgcatcactaatttgatgacgtgaca 19017898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 48779230 - 48779276
Alignment:
Q  17 ctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    |||||||| | ||||||||| || |||||||||||||||||||||||    
T  48779230 ctctccccacttaatcactgccatgtcactaatttgatgacgtgaca 48779276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42267400 - 42267449
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatt 50  Q
    |||||| ||||||||||||||||| | ||||||||  |||||||||||||    
T  42267400 atttaatatttcgtctctctccccacttaatcactaccacgtcactaatt 42267449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 183345 - 183377
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  183345 taatcactgccacgtcactaatttgatgacgtg 183377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 4716592 - 4716624
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  4716592 taatcactgccacgtcactaatttgatgacgtg 4716624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4716768 - 4716728
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacg 41  Q
    |||||||||||||||||||||||| | ||||||||| ||||    
T  4716768 atttaaaatttcgtctctctccccacttaatcactgccacg 4716728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 6367866 - 6367834
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  6367866 taatcactgccacgtcactaatttgatgacgtg 6367834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 7821078 - 7821110
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  7821078 taatcactgccacgtcactaatttgatgacgtg 7821110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 19017753 - 19017785
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  19017753 taatcactgccacgtcactaatttgatgacgtg 19017785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 24905291 - 24905323
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  24905291 taatcactgccacgtcactaatttgatgacgtg 24905323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 31514442 - 31514474
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  31514442 taatcactgccacgtcactaatttgatgacgtg 31514474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 33442718 - 33442750
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  33442718 taatcactgccacgtcactaatttgatgacgtg 33442750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34849108 - 34849152
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcac 45  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||    
T  34849108 atttaaaatttcgtccctctcccctcttaatcactgccacgtcac 34849152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 41099037 - 41099005
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||| ||||||||||||||||||||    
T  41099037 taatcactgtcatgtcactaatttgatgacgtg 41099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 52134341 - 52134309
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  52134341 taatcactgccacgtcactaatttgatgacgtg 52134309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37894 - 37835
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  37894 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 37835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14801833 - 14801892
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  14801833 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtg 14801892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15508004 - 15507945
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||| | ||||||||| | |||||||||||||||||||||    
T  15508004 atttaaaatttcgtctctctccccacttaatcactgccgcgtcactaatttgatgacgtg 15507945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35028329 - 35028270
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  35028329 atttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgacgtg 35028270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17356253 - 17356199
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatg 55  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  17356253 atttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatttgatg 17356199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37976484 - 37976422
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||||||||| |||||||| | ||||||||| || |||||||||||||||||||||||    
T  37976484 atttaaaatttcgtcactctccccacttaatcactgccatgtcactaatttgatgacgtgaca 37976422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 53129836 - 53129775
Alignment:
Q  2 tttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    |||||||||||||| |||||||| | ||||||||| ||| ||||||||||||||||||||||    
T  53129836 tttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgacgtgaca 53129775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34765711 - 34765652
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| |||||||| | ||||||||| |||||||||||||||| ||||||    
T  34765711 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgaggacgtg 34765652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 53701909 - 53701968
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||| || |||||||| | ||||||||| |||||||||||||||||||||||    
T  53701909 atttaaaatttcttccctctccccacttaatcactgccacgtcactaatttgatgacgtg 53701968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 54087026 - 54086967
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||| | ||||||||  || ||||||||||||||||||||    
T  54087026 atttaaaatttcgtctctctccccacttaatcactaacatgtcactaatttgatgacgtg 54086967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 35508571 - 35508512
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||| ||||||||| | ||||||||| || |||| |||||||||||||||    
T  35508571 atttaaaatttcgtatctctccccacttaatcactgccatgtcattaatttgatgacgtg 35508512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52298123 - 52298169
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcacta 47  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||    
T  52298123 atttaaaatttcgtctctctccccacttaatcactgccacgtcacta 52298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 9400643 - 9400675
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||||||||||||    
T  9400643 taatcactgtcacgtcactaatttgatgacgtg 9400675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24349771 - 24349835
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtgacact 65  Q
    ||||||||||||||| ||||||||   ||||||||| |||||||||||| |||||| ||| ||||    
T  24349771 atttaaaatttcgtccctctccccagttaatcactgccacgtcactaatctgatgaggtggcact 24349835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 34765504 - 34765536
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||||||||||||||||||||||||||||||    
T  34765504 taatcactgtcacgtcactaatttgatgacgtg 34765536  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10781815 - 10781760
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    ||||||||||||||| ||||||||   ||| |||||||||||||||||| ||||||    
T  10781815 atttaaaatttcgtccctctccccagttaaccactgtcacgtcactaatctgatga 10781760  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16605699 - 16605758
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||||||| ||| |||| | ||||||||| ||||||||||||| | |||||||    
T  16605699 atttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtg 16605758  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 50418792 - 50418827
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||| ||||||||||||||||||||||||||    
T  50418792 taatcactgccacgtcactaatttgatgacgtgaca 50418827  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52909350 - 52909405
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatga 56  Q
    |||||||||||||||  ||||||| | ||||||||| || ||||||||||||||||    
T  52909350 atttaaaatttcgtccatctccccacttaatcactgccatgtcactaatttgatga 52909405  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 7452107 - 7452075
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  7452107 taatcactgccacgtcactaatttgatgacgtg 7452075  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 9144890 - 9144922
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  9144890 taatcactgccacgtcactaatttgatgacgtg 9144922  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 15507797 - 15507829
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    |||||| ||||||||||||||||||||||||||    
T  15507797 taatcattgtcacgtcactaatttgatgacgtg 15507829  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 16006111 - 16006079
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  16006111 taatcactgccacgtcactaatttgatgacgtg 16006079  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 17356049 - 17356081
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  17356049 taatcactgccacgtcactaatttgatgacgtg 17356081  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18831446 - 18831486
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacg 41  Q
    |||||||||||||||||||||||| | ||||||||| ||||    
T  18831446 atttaaaatttcgtctctctccccacttaatcactgccacg 18831486  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32950239 - 32950279
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacg 41  Q
    |||||||||||||||||||||||| | ||||||||| ||||    
T  32950239 atttaaaatttcgtctctctccccacttaatcactgccacg 32950279  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 33247397 - 33247429
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  33247397 taatcactgccacgtcactaatttgatgacgtg 33247429  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 34837198 - 34837230
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  34837198 taatcactgccacgtcactaatttgatgacgtg 34837230  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 42738155 - 42738187
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  42738155 taatcactgccacgtcactaatttgatgacgtg 42738187  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 44967193 - 44967225
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  44967193 taatcactgccacgtcactaatttgatgacgtg 44967225  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 46661218 - 46661186
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  46661218 taatcactgccacgtcactaatttgatgacgtg 46661186  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50418968 - 50418928
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacg 41  Q
    ||||||||||||||| |||||||| | ||||||||||||||    
T  50418968 atttaaaatttcgtccctctccccacttaatcactgtcacg 50418928  T

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Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 69062 - 69120
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgt 59  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||    
T  69062 atttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgt 69120  T

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Target: scaffold0295 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2240 - 2299
Alignment:
Q  1 atttaaaatttcgtctctctccccgcctaatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||||| ||| |||||||| | ||||||||| || |||| |||||||||||||||    
T  2240 atttaaaattttgtccctctccccacttaatcactgccatgtcaataatttgatgacgtg 2299  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 141718 - 141753
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtgaca 63  Q
    ||||||||| ||||||||||||||||||||||||||    
T  141718 taatcactgccacgtcactaatttgatgacgtgaca 141753  T

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Target: scaffold0559 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 1506 - 1474
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  1506 taatcactgccacgtcactaatttgatgacgtg 1474  T

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Target: scaffold0075 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 14553 - 14585
Alignment:
Q  28 taatcactgtcacgtcactaatttgatgacgtg 60  Q
    ||||||||| |||||||||||||||||||||||    
T  14553 taatcactgccacgtcactaatttgatgacgtg 14585  T

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