View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13703_low_18 (Length: 266)
Name: NF13703_low_18
Description: NF13703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13703_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 18 - 263
Target Start/End: Original strand, 46669056 - 46669300
Alignment:
| Q |
18 |
ctttaatgtgtctttccatgctattacatgagctctatatttctttgaaaaatgaagactaccttgatccccnnnnnnnaaacttccaagaactacataa |
117 |
Q |
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| T |
46669056 |
ctttaatgtgtctttccatgctattacatgagctctatatttctttgaaaaatgaagactaccttgatcccctttttttaaacttccaagaactacataa |
46669155 |
T |
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| Q |
118 |
ctacagtctacaatgactctctcgcannnnnnnnataggtactcacatttttatttctccttgcatgcgttctcatatttttctttctttacagtttgta |
217 |
Q |
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| T |
46669156 |
ctacagtctacaatgattctctcgcattttttt-ataggtactcacatttttatttctccttgcatgcgttttcatatttttctttctttacagtttata |
46669254 |
T |
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| Q |
218 |
cctacagccaaagaatccacttcactttgtttaagtgttcatctca |
263 |
Q |
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| T |
46669255 |
cctacagccaaagaatccacttcactttgtttaagtgttcatctca |
46669300 |
T |
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