View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13704_high_2 (Length: 435)

Name: NF13704_high_2
Description: NF13704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13704_high_2
NF13704_high_2
[»] chr3 (45 HSPs)
chr3 (19-410)||(19637942-19638333)
chr3 (56-410)||(18697601-18697958)
chr3 (371-410)||(17015076-17015115)
chr3 (371-415)||(1061431-1061475)
chr3 (371-415)||(13147007-13147051)
chr3 (371-410)||(15841108-15841147)
chr3 (371-408)||(507076-507113)
chr3 (371-408)||(1786776-1786813)
chr3 (371-408)||(4751613-4751650)
chr3 (371-408)||(5539927-5539964)
chr3 (371-408)||(5582539-5582576)
chr3 (371-408)||(5868602-5868639)
chr3 (371-408)||(6184863-6184900)
chr3 (371-408)||(6493252-6493289)
chr3 (371-408)||(7797527-7797564)
chr3 (371-408)||(8782557-8782594)
chr3 (371-408)||(8998857-8998894)
chr3 (371-408)||(9984794-9984831)
chr3 (371-408)||(10629854-10629891)
chr3 (371-408)||(11209000-11209037)
chr3 (371-408)||(12289886-12289923)
chr3 (371-408)||(13129564-13129601)
chr3 (371-408)||(13264565-13264602)
chr3 (371-408)||(13375574-13375611)
chr3 (371-408)||(13386168-13386205)
chr3 (371-408)||(14473515-14473552)
chr3 (371-408)||(16393954-16393991)
chr3 (371-408)||(16398928-16398965)
chr3 (371-408)||(18004841-18004878)
chr3 (371-408)||(19786316-19786353)
chr3 (371-408)||(20676103-20676140)
chr3 (371-408)||(23765188-23765225)
chr3 (371-408)||(24386424-24386461)
chr3 (371-408)||(24667764-24667801)
chr3 (371-408)||(29464112-29464149)
chr3 (371-408)||(29936460-29936497)
chr3 (371-408)||(29985614-29985651)
chr3 (371-408)||(37874355-37874392)
chr3 (371-408)||(37882873-37882910)
chr3 (371-408)||(38202546-38202583)
chr3 (371-408)||(41691543-41691580)
chr3 (372-408)||(11275292-11275328)
chr3 (371-415)||(15654006-15654050)
chr3 (19-79)||(24611275-24611335)
chr3 (372-408)||(28317145-28317181)
[»] chr2 (25 HSPs)
chr2 (19-425)||(21921054-21921447)
chr2 (24-293)||(22677140-22677409)
chr2 (315-386)||(22674899-22674970)
chr2 (363-418)||(26444030-26444085)
chr2 (379-425)||(22674582-22674628)
chr2 (371-408)||(9765689-9765726)
chr2 (371-408)||(9900499-9900536)
chr2 (371-408)||(10274836-10274873)
chr2 (371-408)||(11398098-11398135)
chr2 (371-408)||(19305345-19305382)
chr2 (371-408)||(21164873-21164910)
chr2 (371-408)||(22936583-22936620)
chr2 (371-408)||(24330675-24330712)
chr2 (371-408)||(24417952-24417989)
chr2 (371-408)||(27229288-27229325)
chr2 (371-408)||(28724244-28724281)
chr2 (371-408)||(29252070-29252107)
chr2 (371-408)||(34793143-34793180)
chr2 (371-408)||(39173020-39173057)
chr2 (371-408)||(40248458-40248495)
chr2 (371-408)||(43090528-43090565)
chr2 (371-415)||(19302722-19302766)
chr2 (371-415)||(24804577-24804621)
chr2 (372-408)||(35260854-35260890)
chr2 (372-408)||(35271479-35271515)
[»] chr7 (22 HSPs)
chr7 (255-417)||(16110740-16110902)
chr7 (29-169)||(12327581-12327721)
chr7 (371-415)||(13177380-13177424)
chr7 (381-418)||(16404969-16405006)
chr7 (371-408)||(174766-174803)
chr7 (371-408)||(459976-460013)
chr7 (371-408)||(1995432-1995469)
chr7 (371-408)||(2708603-2708640)
chr7 (371-408)||(4219884-4219921)
chr7 (371-408)||(6870220-6870257)
chr7 (371-408)||(8005056-8005093)
chr7 (371-408)||(9441139-9441176)
chr7 (371-408)||(15880813-15880850)
chr7 (371-408)||(17953104-17953141)
chr7 (371-408)||(20987133-20987170)
chr7 (371-408)||(22097017-22097054)
chr7 (371-408)||(24741977-24742014)
chr7 (371-408)||(26656325-26656362)
chr7 (371-408)||(40045094-40045131)
chr7 (371-408)||(42873724-42873761)
chr7 (372-408)||(11013063-11013099)
chr7 (371-415)||(18438473-18438517)
[»] chr1 (19 HSPs)
chr1 (19-425)||(9343869-9344277)
chr1 (371-415)||(19162629-19162673)
chr1 (371-415)||(22652536-22652580)
chr1 (372-408)||(38102921-38102957)
chr1 (371-408)||(3179437-3179474)
chr1 (371-408)||(4175137-4175174)
chr1 (371-408)||(5642656-5642693)
chr1 (371-408)||(5841040-5841077)
chr1 (371-408)||(7692422-7692459)
chr1 (371-408)||(12617271-12617308)
chr1 (371-408)||(12738364-12738401)
chr1 (371-408)||(19185041-19185078)
chr1 (371-408)||(21871501-21871538)
chr1 (371-408)||(35640989-35641026)
chr1 (371-408)||(47610884-47610921)
chr1 (371-408)||(51632140-51632177)
chr1 (372-408)||(7515110-7515146)
chr1 (371-415)||(22015039-22015083)
chr1 (372-408)||(36239383-36239419)
[»] chr4 (23 HSPs)
chr4 (19-424)||(39044010-39044418)
chr4 (24-136)||(13693675-13693787)
chr4 (349-408)||(15408631-15408690)
chr4 (371-408)||(4990705-4990742)
chr4 (371-408)||(5020044-5020081)
chr4 (371-408)||(10298579-10298616)
chr4 (371-408)||(10743508-10743545)
chr4 (371-408)||(10957277-10957314)
chr4 (371-408)||(14838967-14839004)
chr4 (371-408)||(15199713-15199750)
chr4 (371-408)||(16263773-16263810)
chr4 (371-408)||(17926006-17926043)
chr4 (371-408)||(18133160-18133197)
chr4 (371-408)||(18755400-18755437)
chr4 (371-408)||(19947305-19947342)
chr4 (371-408)||(22004325-22004362)
chr4 (371-408)||(27173979-27174016)
chr4 (371-408)||(27817856-27817893)
chr4 (371-408)||(30929403-30929440)
chr4 (371-408)||(49515444-49515481)
chr4 (371-408)||(55748162-55748199)
chr4 (372-408)||(24648239-24648275)
chr4 (372-408)||(27664481-27664517)
[»] chr8 (21 HSPs)
chr8 (295-418)||(18163355-18163478)
chr8 (371-415)||(3840826-3840870)
chr8 (371-415)||(19232666-19232710)
chr8 (371-415)||(21296054-21296098)
chr8 (371-415)||(23790529-23790573)
chr8 (371-415)||(23802576-23802620)
chr8 (371-408)||(249703-249740)
chr8 (371-408)||(812804-812841)
chr8 (371-408)||(3351576-3351613)
chr8 (371-408)||(6158961-6158998)
chr8 (371-408)||(9348993-9349030)
chr8 (371-408)||(15783652-15783689)
chr8 (371-408)||(19136575-19136612)
chr8 (371-408)||(19426220-19426257)
chr8 (371-408)||(26118204-26118241)
chr8 (371-408)||(29084286-29084323)
chr8 (371-408)||(30317666-30317703)
chr8 (371-408)||(32080637-32080674)
chr8 (371-408)||(36300821-36300858)
chr8 (371-408)||(44489009-44489046)
chr8 (372-408)||(13691512-13691548)
[»] chr6 (24 HSPs)
chr6 (19-232)||(13139041-13139254)
chr6 (371-415)||(17611500-17611544)
chr6 (371-415)||(17780873-17780917)
chr6 (365-408)||(9115403-9115446)
chr6 (372-415)||(17055303-17055346)
chr6 (370-408)||(16956856-16956894)
chr6 (373-415)||(22306091-22306133)
chr6 (371-408)||(3669292-3669329)
chr6 (371-408)||(4638774-4638811)
chr6 (371-408)||(12719752-12719789)
chr6 (371-408)||(12862779-12862816)
chr6 (371-408)||(13921094-13921131)
chr6 (371-408)||(20032837-20032874)
chr6 (371-408)||(25724642-25724679)
chr6 (371-408)||(26033268-26033305)
chr6 (371-408)||(26872650-26872687)
chr6 (371-408)||(27349593-27349630)
chr6 (371-408)||(27410333-27410370)
chr6 (371-408)||(27501552-27501589)
chr6 (371-408)||(32303962-32303999)
chr6 (371-408)||(32964862-32964899)
chr6 (371-408)||(34810078-34810115)
chr6 (372-408)||(17061537-17061573)
chr6 (371-415)||(18827274-18827318)
[»] scaffold0043 (2 HSPs)
scaffold0043 (32-96)||(13957-14021)
scaffold0043 (152-232)||(14014-14094)
[»] scaffold0012 (2 HSPs)
scaffold0012 (371-408)||(135598-135635)
scaffold0012 (373-408)||(4457-4492)
[»] chr5 (43 HSPs)
chr5 (371-408)||(37737762-37737799)
chr5 (371-415)||(13531066-13531110)
chr5 (371-415)||(17454501-17454545)
chr5 (371-415)||(25182200-25182244)
chr5 (370-408)||(24810941-24810979)
chr5 (371-408)||(1119097-1119134)
chr5 (371-408)||(5298337-5298374)
chr5 (371-408)||(9338983-9339020)
chr5 (371-408)||(14033071-14033108)
chr5 (371-408)||(14454807-14454844)
chr5 (371-408)||(14565848-14565885)
chr5 (371-408)||(15742998-15743035)
chr5 (371-408)||(16001091-16001128)
chr5 (371-408)||(17610091-17610128)
chr5 (371-408)||(17721947-17721984)
chr5 (371-408)||(19467001-19467038)
chr5 (371-408)||(20554844-20554881)
chr5 (371-408)||(22149545-22149582)
chr5 (371-408)||(22679145-22679182)
chr5 (371-408)||(23299306-23299343)
chr5 (371-408)||(23365125-23365162)
chr5 (371-408)||(23398941-23398978)
chr5 (371-408)||(24570117-24570154)
chr5 (371-408)||(24824670-24824707)
chr5 (371-408)||(27050032-27050069)
chr5 (371-408)||(27463191-27463228)
chr5 (371-408)||(27619967-27620004)
chr5 (371-408)||(31351563-31351600)
chr5 (371-408)||(31421694-31421731)
chr5 (371-408)||(31836509-31836546)
chr5 (371-408)||(34054989-34055026)
chr5 (371-408)||(34774938-34774975)
chr5 (371-408)||(35218532-35218569)
chr5 (371-408)||(36590312-36590349)
chr5 (371-408)||(36690727-36690764)
chr5 (371-408)||(39355525-39355562)
chr5 (371-408)||(39498682-39498719)
chr5 (371-408)||(40393388-40393425)
chr5 (371-415)||(21668881-21668925)
chr5 (371-415)||(23485971-23486015)
chr5 (372-408)||(23699810-23699846)
chr5 (372-408)||(30235221-30235257)
chr5 (372-408)||(42045810-42045846)
[»] scaffold0382 (2 HSPs)
scaffold0382 (371-415)||(4231-4275)
scaffold0382 (371-415)||(12614-12658)
[»] scaffold0211 (1 HSPs)
scaffold0211 (371-415)||(2630-2674)
[»] scaffold0892 (1 HSPs)
scaffold0892 (371-410)||(1347-1386)
[»] scaffold0388 (1 HSPs)
scaffold0388 (371-408)||(771-808)
[»] scaffold0105 (1 HSPs)
scaffold0105 (371-408)||(39904-39941)
[»] scaffold0047 (1 HSPs)
scaffold0047 (371-408)||(35801-35838)
[»] scaffold0017 (1 HSPs)
scaffold0017 (374-415)||(46093-46134)
[»] scaffold0016 (1 HSPs)
scaffold0016 (371-408)||(197581-197618)
[»] scaffold0056 (1 HSPs)
scaffold0056 (352-408)||(28569-28625)
[»] scaffold0010 (1 HSPs)
scaffold0010 (371-415)||(112857-112901)


Alignment Details
Target: chr3 (Bit Score: 160; Significance: 4e-85; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 19 - 410
Target Start/End: Original strand, 19637942 - 19638333
Alignment:
Q  19 gaaaacttattttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagag 118  Q
    |||| ||||||||||||  |||| || |||| |  ||||||| ||| ||||| ||||| || ||||| | ||||||||  ||| |||||||| |||| ||    
T  19637942 gaaagcttattttgtgcaagaagttgataaaacaaaagttgtaatctagtcaaaacctcaagcttctaattttaagactatgaaaatttcaatgtcaaag 19638041  T
Q  119 aatcttaagtctaaggttgtgaataactctggatctaagactccaaaaattcagattctaaagagacaagaacctaaatctcaggttctgaagaacttag 218  Q
    | || |||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||||||  ||||| ||||||||| ||||||| |||||  |    
T  19638042 attcctaagtctaagtttgtgaataactctggacctaagacttcaaagattcagattctaaagagaacagaacttaaatctcaagttctgatgaactctg 19638141  T
Q  219 agtatggagtcttagagtctaaggatcagaagaggaaaacaattgtagcttcatgagatttgagaccaaatggtgctaaacctaaagtcttgaatgaaca 318  Q
    ||| |||||||||| ||||||||||||| | ||||| ||| | ||| ||| |||| ||||  ||||||||||||  |||||||| |||||||||||||||    
T  19638142 agtctggagtcttaaagtctaaggatcaaaggaggataactaatgttgctacatgggattcaagaccaaatggtattaaacctagagtcttgaatgaaca 19638241  T
Q  319 taagccacttaacttcaagcattagacacaaaagaagactaaacctttcaggactaaccctaaaggacccataaagatatgggtacctaagt 410  Q
    |||||||| |||||||| | |  || ||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  19638242 taagccacataacttcaggtacaaggcacaaaagaagactaaacccttcagaactaaccataaaggacccaaaaagatatgggtacctaagt 19638333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 56 - 410
Target Start/End: Original strand, 18697601 - 18697958
Alignment:
Q  56 gttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagagaatcttaagtctaaggttgtgaataactctggatcta 155  Q
    ||||||||| ||||||| |||||| |||||  || |||||| |||| | ||||||||||| ||||  | |||||||||||||||| |||||||| |||||    
T  18697601 gttgtgatcaagtcagaccctgaagcttctagctctaagactgtgaaagtttcaaagtcaaagaacttcaagtctaaggttgtgactaactctgaatcta 18697700  T
Q  156 agactccaaaaattcagattctaaagagacaagaacctaaatctcaggttctgaagaacttagagtatggagtcttagagtctaaggatcagaagaggaa 255  Q
    |||||||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||| | ||| || ||||||| || |||||  ||||| || |||    
T  18697701 agactccaaagattcagattctgaagagataagaacctaaatcacaggttctgaagaactcaaagtctgtagtcttaaagcctaagtttcagaggaagaa 18697800  T
Q  256 aacaattgtagcttcatgagatttgagaccaaatggtgctaaacctaaagtcttgaatgaacataagccacttaacttcaagcattagacacaaaagaag 355  Q
    ||||||| | |||||||| ||||  | |||||| |||  ||||||||| ||  |||||||||| ||||||| ||||||||||||| || |||| ||||||    
T  18697801 aacaattattgcttcatgggattcaaaaccaaaaggtattaaacctaaggtactgaatgaacaaaagccacctaacttcaagcataaggcacataagaag 18697900  T
Q  356 ---actaaacctttcaggactaaccctaaaggacccataaagatatgggtacctaagt 410  Q
       | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18697901 aatagtaaaactttcagtactaaccctaaaggacccataaagatatgggtacctaagt 18697958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 410
Target Start/End: Complemental strand, 17015115 - 17015076
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagt 410  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  17015115 actaaccctaaaggacccatgaagatatgggtacctaagt 17015076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 1061475 - 1061431
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  1061475 actaacccaaaaggacccatgaagatatgggtacctaagtctgaa 1061431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 13147051 - 13147007
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  13147051 actaaccccaaaggacccatgaagatatgggtacctaagtctgaa 13147007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 410
Target Start/End: Complemental strand, 15841147 - 15841108
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagt 410  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  15841147 actaaccccaaaggacccatgaagatatgggtacctaagt 15841108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 507076 - 507113
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  507076 actaacccaaaaggacccatgaagatatgggtacctaa 507113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 1786776 - 1786813
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  1786776 actaacccaaaaggacccatgaagatatgggtacctaa 1786813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 4751650 - 4751613
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  4751650 actaacccaaaaggacccatgaagatatgggtacctaa 4751613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 5539927 - 5539964
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5539927 actaacccaaaaggacccatgaagatatgggtacctaa 5539964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 5582539 - 5582576
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5582539 actaacccaaaaggacccatgaagatatgggtacctaa 5582576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 5868602 - 5868639
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5868602 actaacccaaaaggacccatgaagatatgggtacctaa 5868639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 6184863 - 6184900
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  6184863 actaacccaaaaggacccatgaagatatgggtacctaa 6184900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 6493252 - 6493289
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  6493252 actaacccaaaaggacccatgaagatatgggtacctaa 6493289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 7797527 - 7797564
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  7797527 actaacccaaaatgacccataaagatatgggtacctaa 7797564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 8782594 - 8782557
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||| | |||||||||||||||||||||||||||||    
T  8782594 actaactcaaaaggacccataaagatatgggtacctaa 8782557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 8998857 - 8998894
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  8998857 actaacccaaaaggacccatgaagatatgggtacctaa 8998894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 9984794 - 9984831
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  9984794 actaacccaaaaggacccatgaagatatgggtacctaa 9984831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 10629854 - 10629891
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  10629854 actaacccaaaaggacccatgaagatatgggtacctaa 10629891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 11209000 - 11209037
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  11209000 actaacccaaaaggacccatgaagatatgggtacctaa 11209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 12289886 - 12289923
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  12289886 actaacccaaaaggacccatgaagatatgggtacctaa 12289923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 13129601 - 13129564
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  13129601 actaacccaaaaggacccatgaagatatgggtacctaa 13129564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 13264565 - 13264602
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  13264565 actaacccaaaaggacccatgaagatatgggtacctaa 13264602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 13375574 - 13375611
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  13375574 actaacccaaaaggacccatgaagatatgggtacctaa 13375611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 13386168 - 13386205
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  13386168 actaacccaaaaggacccatgaagatatgggtacctaa 13386205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 14473552 - 14473515
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  14473552 actaacccaaaaggacccatgaagatatgggtacctaa 14473515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 16393954 - 16393991
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  16393954 actaacccaaaaggacccatgaagatatgggtacctaa 16393991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 16398928 - 16398965
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  16398928 actaacccaaaaggacccatgaagatatgggtacctaa 16398965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 18004878 - 18004841
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  18004878 actaaccccaaaggacccatgaagatatgggtacctaa 18004841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 19786353 - 19786316
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  19786353 actaacccaaaaggacccatgaagatatgggtacctaa 19786316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 20676103 - 20676140
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  20676103 actaacccaaaaggacccatgaagatatgggtacctaa 20676140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 23765225 - 23765188
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  23765225 actaacccaaaaggacccatgaagatatgggtacctaa 23765188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 24386424 - 24386461
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  24386424 actaacccaaaaggacccatgaagatatgggtacctaa 24386461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 24667801 - 24667764
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  24667801 actaacccaaaaggacccatgaagatatgggtacctaa 24667764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 29464112 - 29464149
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  29464112 actaacccaaaaggacccatgaagatatgggtacctaa 29464149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 29936460 - 29936497
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  29936460 actaacccaaaaggacccatgaagatatgggtacctaa 29936497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 29985614 - 29985651
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  29985614 actaacccaaaaggacccatgaagatatgggtacctaa 29985651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 37874392 - 37874355
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  37874392 actaacccaaaaggacccatgaagatatgggtacctaa 37874355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 37882910 - 37882873
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  37882910 actaacccaaaaggacccatgaagatatgggtacctaa 37882873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 38202583 - 38202546
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  38202583 actaacccaaaaggacccatgaagatatgggtacctaa 38202546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 41691580 - 41691543
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  41691580 actaacccaaaaggacccatgaagatatgggtacctaa 41691543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 11275292 - 11275328
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  11275292 ctaacccaaaaggacccatgaagatatgggtacctaa 11275328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 15654006 - 15654050
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| |||| |||||||||||||| ||||    
T  15654006 actaacccaaaaggacccatgaagaaatgggtacctaagtctgaa 15654050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 24611275 - 24611335
Alignment:
Q  19 gaaaacttattttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaa 79  Q
    ||||||||| |||||| ||||||||||| | | |||  |||| ||||||||||||||||||    
T  24611275 gaaaacttactttgtgtctgaagctgttgagtgtgagattgtaatccagtcagaacctgaa 24611335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 28317145 - 28317181
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  28317145 ctaacccaaaaggacccatgaagatatgggtacctaa 28317181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 19 - 425
Target Start/End: Original strand, 21921054 - 21921447
Alignment:
Q  19 gaaaacttattttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagag 118  Q
    ||||||||| ||||| ||||||| |||| |||||||| |||| |||||||||||||||||| |||||   | |||||| ||||  |||||||||||| ||    
T  21921054 gaaaacttactttgtacctgaagttgttgaatctgaaattgtaatccagtcagaacctgaagcttctagttataagactgtgaatatttcaaagtcaaag 21921153  T
Q  119 aatcttaagtctaaggttgtgaataactctggatctaagactccaaaaattcagattctaaagagacaagaacctaaatctcaggttctgaagaacttag 218  Q
    ||   ||||||||||||| |||  |||| || ||||||||||||||| ||| |||                ||||||||||||| |||||||||||| ||    
T  21921154 aactctaagtctaaggttatgaccaactatgaatctaagactccaaagatttaga----------------acctaaatctcagtttctgaagaactcag 21921237  T
Q  219 agtatggagtcttagagtctaaggatcagaagaggaaaacaattgtagcttcatgagatttgagaccaaatggtgctaaacctaaagtcttgaatgaaca 318  Q
    ||| | |||||||| || |||||  |||||  |||||||||||||| |||||||| ||||  |||||||| |||||||||||||||||||| ||||||||    
T  21921238 agtctagagtcttaaagcctaagtttcagagaaggaaaacaattgttgcttcatgggattcaagaccaaaaggtgctaaacctaaagtcttcaatgaaca 21921337  T
Q  319 taagccacttaacttcaagcattagacacaaaag---aagactaaacctttcaggactaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||||||||||||| |   || ||||||||   ||||||||| | || |||| ||||||||| |||||||||||||||| | ||||||||| |||     
T  21921338 taagccacttaacttcaaacgcaaggcacaaaagaataagactaaaacctttaggattaaccctaagggacccataaagatattgatacctaagtctgag 21921437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 24 - 293
Target Start/End: Complemental strand, 22677409 - 22677140
Alignment:
Q  24 cttattttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagagaatct 123  Q
    |||| |||||| | ||||||| |||| | |||||||| ||||||||| |||||||| ||||||| | ||||||  |||  ||||| |||||| ||||||     
T  22677409 cttactttgtgtcagaagctgataaaacggaagttgtaatccagtcaaaacctgaagcttctgattctaagactatgaacatttcgaagtcaaagaatcc 22677310  T
Q  124 taagtctaaggttgtgaataactctggatctaagactccaaaaattcagattctaaagagacaagaacctaaatctcaggttctgaagaacttagagtat 223  Q
    || ||||||||||||||| ||||||  ||||||||||  | | ||||||||||| ||||||| | ||||||||||| | ||||| | ||||| ||||| |    
T  22677309 tatgtctaaggttgtgaacaactctaaatctaagactttacagattcagattctgaagagaccaaaacctaaatctgaagttcttatgaactcagagtct 22677210  T
Q  224 ggagtcttagagtctaaggatcagaagaggaaaacaattgtagcttcatgagatttgagaccaaatggtg 293  Q
    ||||||| | |||||||||||||||  || ||||||| |||||||| |||  |||| ||| |||||||||    
T  22677209 ggagtctcaaagtctaaggatcagagaagtaaaacaaatgtagcttaatggaatttaagagcaaatggtg 22677140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 386
Target Start/End: Complemental strand, 22674970 - 22674899
Alignment:
Q  315 aacataagccacttaacttcaagcattagacacaaaagaagactaaacctttcaggactaaccctaaaggac 386  Q
    |||||||||||| ||||||||| ||  || ||||||||||||||||||||||||||||||||| ||||||||    
T  22674970 aacataagccacataacttcaaccacaaggcacaaaagaagactaaacctttcaggactaaccataaaggac 22674899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 26444085 - 26444030
Alignment:
Q  363 ctttcaggactaaccctaaaggacccataaagatatgggtacctaagtttgaaatt 418  Q
    ||||||| |||||| |||||||||||||||| ||||| |||||||||  |||||||    
T  26444085 ctttcagaactaactctaaaggacccataaaaatatgagtacctaagaatgaaatt 26444030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 425
Target Start/End: Complemental strand, 22674628 - 22674582
Alignment:
Q  379 taaaggacccataaagatatgggtacctaagtttgaaattcttgatg 425  Q
    |||||||||||||||||||||  | |||||| |||||||||||||||    
T  22674628 taaaggacccataaagatatgtttgcctaagcttgaaattcttgatg 22674582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 9765689 - 9765726
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  9765689 actaacccaaaaggacccatgaagatatgggtacctaa 9765726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 9900499 - 9900536
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  9900499 actaacccaaaaggacccatgaagatatgggtacctaa 9900536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 10274873 - 10274836
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  10274873 actaacccaaaaggacccatgaagatatgggtacctaa 10274836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 11398098 - 11398135
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  11398098 actaacccaaaaggacccatgaagatatgggtacctaa 11398135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 19305345 - 19305382
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  19305345 actaacccaaaaggacccatgaagatatgggtacctaa 19305382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 21164873 - 21164910
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  21164873 actaacccaaaaggacccatgaagatatgggtacctaa 21164910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 22936583 - 22936620
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  22936583 actaacccaaaaggacccatgaagatatgggtacctaa 22936620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 24330675 - 24330712
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  24330675 actaacccaaaaggacccatgaagatatgggtacctaa 24330712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 24417952 - 24417989
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  24417952 actaacccaaaaggacccatgaagatatgggtacctaa 24417989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 27229325 - 27229288
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27229325 actaacccaaaaggacccatgaagatatgggtacctaa 27229288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 28724244 - 28724281
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  28724244 actaacccaaaaggacccatgaagatatgggtacctaa 28724281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 29252107 - 29252070
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  29252107 actaacccaaaaggacccatgaagatatgggtacctaa 29252070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 34793143 - 34793180
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  34793143 actaacccaaaaggacccatgaagatatgggtacctaa 34793180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 39173020 - 39173057
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  39173020 actaacccaaaaggacccatgaagatatgggtacctaa 39173057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 40248495 - 40248458
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  40248495 actaacccaaaaggacccatgaagatatgggtacctaa 40248458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 43090565 - 43090528
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  43090565 actaacccaaaaggacccatgaagatatgggtacctaa 43090528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 19302722 - 19302766
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  19302722 actaacccaaaaggactcatgaagatatgggtacctaagtctgaa 19302766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 24804577 - 24804621
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| |||| |||||| ||||||||||||||||||| ||||    
T  24804577 actaaccccaaagaacccatgaagatatgggtacctaagtctgaa 24804621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 35260890 - 35260854
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  35260890 ctaacccaaaaggacccatgaagatatgggtacctaa 35260854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 35271515 - 35271479
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  35271515 ctaacccaaaaggacccatgaagatatgggtacctaa 35271479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 255 - 417
Target Start/End: Original strand, 16110740 - 16110902
Alignment:
Q  255 aaacaattgtagcttcatgagatttgagaccaaatggtgctaaacctaaagtcttgaatgaacataagccacttaacttcaagcattagacacaaaagaa 354  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||  || ||||||||||    
T  16110740 aaacaattgtagcttcatgagattcaagaccaaatggtgataaacttaaagtcttgaatgaacataagccacttaaattcaagcaaaaggcacaaaagaa 16110839  T
Q  355 gactaaacctttcaggactaaccctaaaggacccataaagatatgggtacctaagtttgaaat 417  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| | ||||||    
T  16110840 gactaaatctttcaggaataaccctaaaggacccataaagatatgggtacctaaatatgaaat 16110902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 12327581 - 12327721
Alignment:
Q  29 tttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagagaatcttaagt 128  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| | | ||||||  ||   |||| ||||||| |||||||| |||    
T  12327581 tttgtgcctgaagctattgaatctgaagttgtgatccagtcagaacttgaatcttctaattctaagactttggatatttgaaagtcaaagaatcttgagt 12327680  T
Q  129 ctaaggttgtgaataactctggatctaagactccaaaaatt 169  Q
    |||||||| ||| |||||||| |||||||||||||||||||    
T  12327681 ctaaggttctgactaactctgaatctaagactccaaaaatt 12327721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 13177380 - 13177424
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  13177380 actaaccctaaaggacccatgaagatatgggtacctaagtctgaa 13177424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 16405006 - 16404969
Alignment:
Q  381 aaggacccataaagatatgggtacctaagtttgaaatt 418  Q
    |||||||||||||||||||||||||||| |||||||||    
T  16405006 aaggacccataaagatatgggtacctaaatttgaaatt 16404969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 174803 - 174766
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  174803 actaacccaaaaggacccatgaagatatgggtacctaa 174766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 459976 - 460013
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  459976 actaacccaaaaggacccatgaagatatgggtacctaa 460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 1995469 - 1995432
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  1995469 actaacccaaaaggacccatgaagatatgggtacctaa 1995432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 2708603 - 2708640
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  2708603 actaacccaaaaggacccatgaagatatgggtacctaa 2708640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 4219921 - 4219884
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  4219921 actaacccaaaaggacccatgaagatatgggtacctaa 4219884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 6870220 - 6870257
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  6870220 actaacccaaaaggacccatgaagatatgggtacctaa 6870257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 8005056 - 8005093
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  8005056 actaacccaaaaggacccatgaagatatgggtacctaa 8005093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 9441176 - 9441139
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  9441176 actaacccaaaaggacccatgaagatatgggtacctaa 9441139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 15880813 - 15880850
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  15880813 actaacccaaaaggacccatgaagatatgggtacctaa 15880850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 17953104 - 17953141
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  17953104 actaacccaaaaggacccatgaagatatgggtacctaa 17953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 20987170 - 20987133
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  20987170 actaacccaaaaggacccatgaagatatgggtacctaa 20987133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 22097054 - 22097017
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  22097054 actaacccaaaaggacccatgaagatatgggtacctaa 22097017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 24742014 - 24741977
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  24742014 actaacccaaaaggacccatgaagatatgggtacctaa 24741977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 26656325 - 26656362
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  26656325 actaacccaaaaggacccatgaagatatgggtacctaa 26656362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 40045094 - 40045131
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  40045094 actaacccaaaaggacccatgaagatatgggtacctaa 40045131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 42873761 - 42873724
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  42873761 actaacccaaaaggacccatgaagatatgggtacctaa 42873724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 11013099 - 11013063
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  11013099 ctaacccaaaaggacccatgaagatatgggtacctaa 11013063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 18438517 - 18438473
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||| ||||||| ||||||||||||||||||| ||||    
T  18438517 actaacccaaaacgacccatgaagatatgggtacctaagtctgaa 18438473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 4e-48; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 19 - 425
Target Start/End: Complemental strand, 9344277 - 9343869
Alignment:
Q  19 gaaaacttattttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagag 118  Q
    ||||||||| ||||||||||||| |||| | ||| |  |||| ||||||  |||||||||  |||||  ||  ||||| ||||   ||||||||||| ||    
T  9344277 gaaaacttactttgtgcctgaaggtgttgagtctaagattgtaatccagctagaacctgatgcttctagctccaagactgtgaacgtttcaaagtcaaag 9344178  T
Q  119 aatcttaagtctaaggttgtgaataactctggatctaagactccaaaaattcagattctaaagagacaagaacctaaatctcaggttctgaagaacttag 218  Q
    ||   ||||||||||||| |||  ||||||| ||||||||||||||| ||||||||||| ||| ||| ||||| | |||| |||||||| ||||||| |     
T  9344177 aactctaagtctaaggttatgaccaactctgaatctaagactccaaagattcagattctgaagggaccagaacatgaatcacaggttctaaagaactcaa 9344078  T
Q  219 agtatggagtcttagagtctaaggatcagaagaggaaaacaattgtagcttcatgagatttgagaccaaatggtgctaaacctaaagtcttgaatgaaca 318  Q
    ||| |  ||||||| || |||||  ||||| |||||||  |||||| ||||| || ||||  | || |||   |  |||||| ||||| |||||||||||    
T  9344077 agtctatagtcttaaagcctaagcttcagaggaggaaataaattgttgcttcctgggattcaaaacaaaaacatcttaaacccaaagttttgaatgaaca 9343978  T
Q  319 taagccacttaacttcaagcattagacacaaa--agaagactaaacctttcaggactaaccctaaaggacccataaagatatgggtacctaagtttgaaa 416  Q
     ||| ||||||||||||||||  || ||||||  |||||| |||| | ||||| | |||  |||||||||||||||||||||| ||||||||||||||||    
T  9343977 gaagtcacttaacttcaagcacaaggcacaaagaagaagagtaaaacattcagtaataagactaaaggacccataaagatatgagtacctaagtttgaaa 9343878  T
Q  417 ttcttgatg 425  Q
    |||||||||    
T  9343877 ttcttgatg 9343869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 19162629 - 19162673
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  19162629 actaaccccaaaggacccatgaagatatgggtacctaagtctgaa 19162673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 22652580 - 22652536
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  22652580 actaaccccaaaggacccatgaagatatgggtacctaagtctgaa 22652536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 38102957 - 38102921
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| |||||||||||||||||||||||||||||    
T  38102957 ctaacccaaaaggacccataaagatatgggtacctaa 38102921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 3179474 - 3179437
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  3179474 actaacccaaaaggacccatgaagatatgggtacctaa 3179437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 4175174 - 4175137
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  4175174 actaacccaaaaggacccatgaagatatgggtacctaa 4175137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 5642656 - 5642693
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5642656 actaacccaaaaggacccatgaagatatgggtacctaa 5642693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 5841077 - 5841040
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5841077 actaacccaaaaggacccatgaagatatgggtacctaa 5841040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 7692422 - 7692459
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  7692422 actaacccaaaaggacccatgaagatatgggtacctaa 7692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 12617271 - 12617308
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  12617271 actaacccaaaaggacccatgaagatatgggtacctaa 12617308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 12738401 - 12738364
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  12738401 actaacccaaaaggacccatgaagatatgggtacctaa 12738364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 19185078 - 19185041
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  19185078 actaacccaaaaggacccatgaagatatgggtacctaa 19185041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 21871538 - 21871501
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  21871538 actaacccaaaaggacccatgaagatatgggtacctaa 21871501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 35640989 - 35641026
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  35640989 actaacccaaaaggacccatgaagatatgggtacctaa 35641026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 47610884 - 47610921
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  47610884 actaacccaaaaggacccatgaagatatgggtacctaa 47610921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 51632140 - 51632177
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  51632140 actaacccaaaaggacccatgaagatatgggtacctaa 51632177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 7515146 - 7515110
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  7515146 ctaacccaaaaggacccatgaagatatgggtacctaa 7515110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 22015083 - 22015039
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||||    
T  22015083 actaactctaaaggacccacgaagatatgggtacctaagtctgaa 22015039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 36239383 - 36239419
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  36239383 ctaacccaaaaggacccatgaagatatgggtacctaa 36239419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 19 - 424
Target Start/End: Complemental strand, 39044418 - 39044010
Alignment:
Q  19 gaaaacttattttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagag 118  Q
    ||||||||| ||| ||||||||| |||| | |||||  ||||  || ||||||||||||||  ||||  || ||||||  |||   ||||||||||| ||    
T  39044418 gaaaacttactttatgcctgaaggtgttgagtctgatattgttgtcaagtcagaacctgaagtttctagctctaagactttgaatgtttcaaagtcaaag 39044319  T
Q  119 aatcttaagtctaaggttgtgaataactctggatctaagactccaaaaattcagattctaaagagacaagaacctaaatctcaggttctgaagaacttag 218  Q
    ||  ||||| |||||||  |||  ||||||| |||||||||| |||| ||||||||||| ||||||| ||||||||||   || ||||| |||||||       
T  39044318 aactttaaggctaaggtaatgaccaactctgaatctaagacttcaaagattcagattctgaagagaccagaacctaaactacacgttctaaagaactcgt 39044219  T
Q  219 agtatggagtcttagagtctaaggatcagaagaggaaaacaattgtagcttcatgagatttgagaccaaatggtgctaaacctaaagtcttgaatgaaca 318  Q
    ||| ||   ||||| || |||||  ||| |  |||||||||||||| ||||| || ||||  | |||||| |||| ||||||||| ||  ||||||||||    
T  39044218 agtctgttttcttaaagcctaagattcaaagaaggaaaacaattgttgcttcttgggattcaaaaccaaaaggtgttaaacctaaggtgatgaatgaaca 39044119  T
Q  319 taagccacttaacttcaagcattagacacaaaagaagac---taaacctttcaggactaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
     ||||||| |||||| || ||  || ||||||||||||    ||||  |||||| |||||||||||||||| ||||||||||||||||||||| | ||||    
T  39044118 gaagccacctaacttgaaacacaaggcacaaaagaagaagagtaaaaatttcagtactaaccctaaaggactcataaagatatgggtacctaaatctgaa 39044019  T
Q  416 attcttgat 424  Q
    ||| |||||    
T  39044018 attgttgat 39044010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 13693787 - 13693675
Alignment:
Q  24 cttattttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagagaatct 123  Q
    |||| |||||| | ||||||| |||| |||||||||||||||||||||||||| ||  |||||| | ||||||  |||  |||||||||||| ||||||     
T  13693787 cttactttgtgtcagaagctgataaaactgaagttgtgatccagtcagaacctaaaggttctgattctaagactatgaacatttcaaagtcaaagaatcg 13693688  T
Q  124 taagtctaaggtt 136  Q
    |||||||||||||    
T  13693687 taagtctaaggtt 13693675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 15408690 - 15408631
Alignment:
Q  349 aaagaagactaaacctttcaggactaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| |||| ||| ||| |||||||  ||| |||||||||||||||||||||||||    
T  15408690 aaagaagagtaaaacttccagtactaacctcaaaagacccataaagatatgggtacctaa 15408631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 4990705 - 4990742
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  4990705 actaacccaaaaggacccatgaagatatgggtacctaa 4990742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 5020081 - 5020044
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5020081 actaacccaaaaggacccatgaagatatgggtacctaa 5020044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 10298616 - 10298579
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  10298616 actaacccaaaaggacccatgaagatatgggtacctaa 10298579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 10743508 - 10743545
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  10743508 actaacccaaaaggacccatgaagatatgggtacctaa 10743545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 10957277 - 10957314
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  10957277 actaacccaaaaggacccatgaagatatgggtacctaa 10957314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 14838967 - 14839004
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  14838967 actaacccaaaaggacccatgaagatatgggtacctaa 14839004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 15199713 - 15199750
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  15199713 actaacccaaaaggacccatgaagatatgggtacctaa 15199750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 16263810 - 16263773
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  16263810 actaacccaaaaggacccatgaagatatgggtacctaa 16263773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 17926043 - 17926006
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  17926043 actaacccaaaaggacccatgaagatatgggtacctaa 17926006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 18133160 - 18133197
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  18133160 actaacccaaaaggacccatgaagatatgggtacctaa 18133197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 18755400 - 18755437
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  18755400 actaacccaaaaggacccatgaagatatgggtacctaa 18755437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 19947305 - 19947342
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  19947305 actaacccaaaaggacccatgaagatatgggtacctaa 19947342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 22004362 - 22004325
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  22004362 actaacccaaaaggacccatgaagatatgggtacctaa 22004325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 27174016 - 27173979
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27174016 actaacccaaaaggacccatgaagatatgggtacctaa 27173979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 27817856 - 27817893
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27817856 actaacccaaaaggacccatgaagatatgggtacctaa 27817893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 30929403 - 30929440
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  30929403 actaacccaaaaggacccatgaagatatgggtacctaa 30929440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 49515481 - 49515444
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  49515481 actaacccaaaaggacccatgaagatatgggtacctaa 49515444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 55748162 - 55748199
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  55748162 actaacccaaaaggacccatgaagatatgggtacctaa 55748199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 24648275 - 24648239
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  24648275 ctaacccaaaaggacccatgaagatatgggtacctaa 24648239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 27664517 - 27664481
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  27664517 ctaacccaaaaggacccatgaagatatgggtacctaa 27664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 418
Target Start/End: Complemental strand, 18163478 - 18163355
Alignment:
Q  295 taaacctaaagtcttgaatgaacataagccacttaacttcaagcattagacacaaaagaagactaaacctttcaggactaaccctaaaggacccataaag 394  Q
    |||||||| |||||||| ||||| ||||||   |||||||| |||  || |||||||||||  |||||| ||||| |  ||||| |||||||||||||||    
T  18163478 taaacctagagtcttgactgaacctaagccttataacttcaggcacaaggcacaaaagaagtataaacccttcagaatcaacccaaaaggacccataaag 18163379  T
Q  395 atatgggtacctaagtttgaaatt 418  Q
    ||||| ||||| |||| |||||||    
T  18163378 atatgagtaccgaagtctgaaatt 18163355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 3840870 - 3840826
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  3840870 actaacccaaaaggacccatgaagatatgggtacctaagtctgaa 3840826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 19232710 - 19232666
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  19232710 actaacccaaaaggacccatgaagatatgggtacctaaatttgaa 19232666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 21296098 - 21296054
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  21296098 actaaccccaaaggacccatgaagatatgggtacctaaatttgaa 21296054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 23790573 - 23790529
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  23790573 actaacccaaaaggacccatgaagatatgggtacctaagtctgaa 23790529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 23802620 - 23802576
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  23802620 actaacccaaaaggacccatgaagatatgggtacctaagtctgaa 23802576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 249740 - 249703
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  249740 actaacccaaaaggacccatgaagatatgggtacctaa 249703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 812841 - 812804
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  812841 actaacccaaaaggacccatgaagatatgggtacctaa 812804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 3351576 - 3351613
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  3351576 actaacccaaaaggacccatgaagatatgggtacctaa 3351613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 6158998 - 6158961
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  6158998 actaacccaaaaggacccatgaagatatgggtacctaa 6158961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 9349030 - 9348993
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  9349030 actaacccaaaaggacccatgaagatatgggtacctaa 9348993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 15783652 - 15783689
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  15783652 actaacccaaaaggacccatgaagatatgggtacctaa 15783689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 19136612 - 19136575
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  19136612 actaacccaaaaggacccatgaagatatgggtacctaa 19136575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 19426257 - 19426220
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  19426257 actaacccaaaaggacccatgaagatatgggtacctaa 19426220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 26118241 - 26118204
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  26118241 actaacccaaaaggacccatgaagatatgggtacctaa 26118204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 29084323 - 29084286
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  29084323 actaacccaaaaggacccatgaagatatgggtacctaa 29084286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 30317666 - 30317703
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  30317666 actaacccaaaaggacccatgaagatatgggtacctaa 30317703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 32080637 - 32080674
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  32080637 actaacccaaaaggacccatgaagatatgggtacctaa 32080674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 36300858 - 36300821
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  36300858 actaacccaaaaggacccatgaagatatgggtacctaa 36300821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 44489046 - 44489009
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  44489046 actaacccaaaaggacccatgaagatatgggtacctaa 44489009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 13691512 - 13691548
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  13691512 ctaacccaaaaggacccatgaagatatgggtacctaa 13691548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 13139041 - 13139254
Alignment:
Q  19 gaaaacttattttgtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagaccgtgacaatttcaaagtcagag 118  Q
    ||||||||||||||||||||||| |  | | ||| |  |  ||||||| | |||||||||| |||||  || ||||||  |||  |||||||| ||| ||    
T  13139041 gaaaacttattttgtgcctgaaggtactgagtctaatataatgatccatttagaacctgaagcttctagctctaagactctgaatatttcaaaatcaaag 13139140  T
Q  119 aatcttaagtctaaggttgtgaataactctggatctaagactccaaaaattcagattctaaagagacaagaacctaaatctcaggttctgaagaacttag 218  Q
    ||  ||||| |||||||  ||| |||||||  |||||| |||| ||  ||||||||||| || |||  |||||||||||| || ||||||||||||| ||    
T  13139141 aactttaaggctaaggtaatgactaactctaaatctaatactctaacgattcagattctgaaaagatcagaacctaaatcacatgttctgaagaactcag 13139240  T
Q  219 agtatggagtctta 232  Q
    ||| || |||||||    
T  13139241 agtctgtagtctta 13139254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 17611500 - 17611544
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  17611500 actaaccccaaaggacccatgaagatatgggtacctaagtctgaa 17611544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 17780917 - 17780873
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  17780917 actaacccaaaaggacccatgaagatatgggtacctaagtctgaa 17780873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 408
Target Start/End: Original strand, 9115403 - 9115446
Alignment:
Q  365 ttcaggactaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||    
T  9115403 ttcagaactaacccaaaaggacccatgaagatatgggtacctaa 9115446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 415
Target Start/End: Complemental strand, 17055346 - 17055303
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||    
T  17055346 ctaacccaaaaggacccatgaagatatgggtacctaagtctgaa 17055303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 16956894 - 16956856
Alignment:
Q  370 gactaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  16956894 gactaacccaaaaggacccatgaagatatgggtacctaa 16956856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 415
Target Start/End: Complemental strand, 22306133 - 22306091
Alignment:
Q  373 taaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||    
T  22306133 taacccaaaaggacccatgaagatatgggtacctaagtctgaa 22306091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 3669329 - 3669292
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  3669329 actaacccaaaaggacccatgaagatatgggtacctaa 3669292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 4638811 - 4638774
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  4638811 actaacccaaaaggacccatgaagatatgggtacctaa 4638774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 12719752 - 12719789
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  12719752 actaacccaaaaggacccatgaagatatgggtacctaa 12719789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 12862816 - 12862779
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  12862816 actaacccaaaaggacccatgaagatatgggtacctaa 12862779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 13921131 - 13921094
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  13921131 actaacccaaaaggacccatgaagatatgggtacctaa 13921094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 20032837 - 20032874
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  20032837 actaacccaaaaggacccatgaagatatgggtacctaa 20032874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 25724642 - 25724679
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  25724642 actaacccaaaaggacccatgaagatatgggtacctaa 25724679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 26033305 - 26033268
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  26033305 actaacccaaaaggacccatgaagatatgggtacctaa 26033268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 26872687 - 26872650
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  26872687 actaacccaaaaggacccatgaagatatgggtacctaa 26872650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 27349630 - 27349593
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27349630 actaacccaaaaggacccatgaagatatgggtacctaa 27349593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 27410370 - 27410333
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27410370 actaacccaaaaggacccatgaagatatgggtacctaa 27410333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 27501589 - 27501552
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27501589 actaacccaaaaggacccatgaagatatgggtacctaa 27501552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 32303962 - 32303999
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  32303962 actaacccaaaaggacccatgaagatatgggtacctaa 32303999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 32964862 - 32964899
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  32964862 actaacccaaaaggacccatgaagatatgggtacctaa 32964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 34810078 - 34810115
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  34810078 actaacccaaaaggacccatgaagatatgggtacctaa 34810115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 17061573 - 17061537
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  17061573 ctaacccaaaaggacccatgaagatatgggtacctaa 17061537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 18827274 - 18827318
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||| ||||||||| ||||    
T  18827274 actaacccaaaaggacccatgaagatatggatacctaagtctgaa 18827318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 13957 - 14021
Alignment:
Q  32 gtgcctgaagctgttaaatctgaagttgtgatccagtcagaacctgaatcttctgactttaagac 96  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||  ||||||| | ||||||    
T  13957 gtgcctgaagctgttgaatctgaagttgtgatccagtccgaacctgatgcttctgattctaagac 14021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 14014 - 14094
Alignment:
Q  152 tctaagactccaaaaattcagattctaaagagacaagaacctaaatctcaggttctgaagaacttagagtatggagtctta 232  Q
    |||||||||||||| |||| |||| | ||||||| |||||||||||  |||||||||||||||| | ||| ||||||||||    
T  14014 tctaagactccaaagattctgattgtgaagagactagaacctaaataacaggttctgaagaactcatagtctggagtctta 14094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 135635 - 135598
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||||||||||||||| |||||||||||||||||    
T  135635 actaaccctaaaggacccatgaagatatgggtacctaa 135598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 408
Target Start/End: Original strand, 4457 - 4492
Alignment:
Q  373 taaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||||||||||||| |||||||||||||||||    
T  4457 taaccctaaaggacccatgaagatatgggtacctaa 4492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 37737799 - 37737762
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| |||||||||||||||||||||||||||||    
T  37737799 actaacccaaaaggacccataaagatatgggtacctaa 37737762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 13531110 - 13531066
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  13531110 actaacccaaaaggacccatgaagatatgggtacctaagtctgaa 13531066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 17454545 - 17454501
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  17454545 actaacccaaaaggacccatgaagatatgggtacctaaatttgaa 17454501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 25182200 - 25182244
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||    
T  25182200 actaaccccaaaggacccatgaagatatgcgtacctaagtttgaa 25182244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 24810941 - 24810979
Alignment:
Q  370 gactaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  24810941 gactaacccaaaaggacccatgaagatatgggtacctaa 24810979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 1119134 - 1119097
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  1119134 actaacccaaaaggacccatgaagatatgggtacctaa 1119097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 5298374 - 5298337
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5298374 actaacccaaaaggacccatgaagatatgggtacctaa 5298337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 9338983 - 9339020
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  9338983 actaacccaaaaggacccatgaagatatgggtacctaa 9339020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 14033071 - 14033108
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  14033071 actaacccaaaaggacccatgaagatatgggtacctaa 14033108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 14454844 - 14454807
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  14454844 actaacccaaaaggacccatgaagatatgggtacctaa 14454807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 14565885 - 14565848
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  14565885 actaacccaaaaggacccatgaagatatgggtacctaa 14565848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 15742998 - 15743035
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  15742998 actaacccaaaaggacccatgaagatatgggtacctaa 15743035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 16001128 - 16001091
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  16001128 actaacccaaaaggacccatgaagatatgggtacctaa 16001091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 17610091 - 17610128
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  17610091 actaacccaaaaggacccatgaagatatgggtacctaa 17610128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 17721947 - 17721984
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  17721947 actaacccaaaaggacccatgaagatatgggtacctaa 17721984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 19467001 - 19467038
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  19467001 actaacccaaaaggacccatgaagatatgggtacctaa 19467038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 20554844 - 20554881
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  20554844 actaacccaaaaggacccatgaagatatgggtacctaa 20554881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 22149545 - 22149582
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  22149545 actaacccaaaaggacccatgaagatatgggtacctaa 22149582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 22679145 - 22679182
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  22679145 actaacccaaaaggacccatgaagatatgggtacctaa 22679182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 23299306 - 23299343
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  23299306 actaacccaaaaggacccatgaagatatgggtacctaa 23299343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 23365125 - 23365162
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  23365125 actaacccaaaaggacccatgaagatatgggtacctaa 23365162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 23398941 - 23398978
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  23398941 actaacccaaaaggacccatgaagatatgggtacctaa 23398978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 24570117 - 24570154
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  24570117 actaacccaaaaggacccatgaagatatgggtacctaa 24570154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 24824707 - 24824670
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  24824707 actaacccaaaaggacccatgaagatatgggtacctaa 24824670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 27050069 - 27050032
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27050069 actaacccaaaaggacccatgaagatatgggtacctaa 27050032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 27463191 - 27463228
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27463191 actaacccaaaaggacccatgaagatatgggtacctaa 27463228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 27620004 - 27619967
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  27620004 actaacccaaaaggacccatgaagatatgggtacctaa 27619967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 31351563 - 31351600
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  31351563 actaacccaaaaggacccatgaagatatgggtacctaa 31351600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 31421694 - 31421731
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  31421694 actaacccaaaaggacccatgaagatatgggtacctaa 31421731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 31836509 - 31836546
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  31836509 actaacccaaaaggacccatgaagatatgggtacctaa 31836546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 34054989 - 34055026
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  34054989 actaacccaaaaggacccatgaagatatgggtacctaa 34055026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 34774938 - 34774975
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  34774938 actaacccaaaaggacccatgaagatatgggtacctaa 34774975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 35218532 - 35218569
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  35218532 actaacccaaaaggacccatgaagatatgggtacctaa 35218569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 36590349 - 36590312
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  36590349 actaacccaaaaggacccatgaagatatgggtacctaa 36590312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 36690727 - 36690764
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  36690727 actaacccaaaaggacccatgaagatatgggtacctaa 36690764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 39355525 - 39355562
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  39355525 actaacccaaaaggacccatgaagatatgggtacctaa 39355562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 39498719 - 39498682
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  39498719 actaacccaaaaggacccatgaagatatgggtacctaa 39498682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 40393388 - 40393425
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  40393388 actaacccaaaaggacccatgaagatatgggtacctaa 40393425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 21668881 - 21668925
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||| ||||||||| ||||    
T  21668881 actaacccaaaaggacccatgaagatatggttacctaagtctgaa 21668925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 23486015 - 23485971
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  23486015 actaaccccaaaggacacatgaagatatgggtacctaagtctgaa 23485971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 23699810 - 23699846
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  23699810 ctaacccaaaaggacccatgaagatatgggtacctaa 23699846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 30235257 - 30235221
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  30235257 ctaacccaaaaggacccatgaagatatgggtacctaa 30235221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 42045810 - 42045846
Alignment:
Q  372 ctaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  42045810 ctaacccaaaaggacccatgaagatatgggtacctaa 42045846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 4231 - 4275
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  4231 actaaccccaaaggacccatgaagatatgggtacctaagtctgaa 4275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 12614 - 12658
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  12614 actaaccccaaaggacccatgaagatatgggtacctaagtctgaa 12658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 2630 - 2674
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  2630 actaaccccaaaggacccatgaagatatgggtacctaagtctgaa 2674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 410
Target Start/End: Original strand, 1347 - 1386
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagt 410  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  1347 actaacccaaaaggacccatgaagatatgggtacctaagt 1386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 808 - 771
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  808 actaacccaaaaggacccatgaagatatgggtacctaa 771  T

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Target: scaffold0105 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 39904 - 39941
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  39904 actaacccaaaaggacccatgaagatatgggtacctaa 39941  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 35801 - 35838
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  35801 actaacccaaaaggacccatgaagatatgggtacctaa 35838  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 415
Target Start/End: Original strand, 46093 - 46134
Alignment:
Q  374 aaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||    
T  46093 aacccaaaaggacccatgaagatatgggtacctaagtctgaa 46134  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Complemental strand, 197618 - 197581
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaa 408  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  197618 actaacccaaaaggacccatgaagatatgggtacctaa 197581  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 408
Target Start/End: Original strand, 28569 - 28625
Alignment:
Q  352 gaagactaaacctttcaggactaaccctaaaggacccataaagatatgggtacctaa 408  Q
    ||||| |||| ||||||| |||||||| ||||||||||||||   ||||||||||||    
T  28569 gaagagtaaaactttcagaactaaccccaaaggacccataaaacaatgggtacctaa 28625  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Complemental strand, 112901 - 112857
Alignment:
Q  371 actaaccctaaaggacccataaagatatgggtacctaagtttgaa 415  Q
    |||||||| |||| |||||| ||||||||||||||||||| ||||    
T  112901 actaacccaaaagtacccatgaagatatgggtacctaagtctgaa 112857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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