View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13706_high_32 (Length: 247)
Name: NF13706_high_32
Description: NF13706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13706_high_32 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 33503685 - 33503476
Alignment:
| Q |
15 |
gaagcaaaggagaaagaagaaaagaagttaactgcaaaaaccactcaagaacaggatgatatccctcttttttattcagacatcatgcccctccttgtaa |
114 |
Q |
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| T |
33503685 |
gaagcaaaggagaaagaagaaaagaagttaactgcaaaaaccactcaagaacaggatgatatccctcttttttattcagacatcatgcccctccttgtaa |
33503586 |
T |
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| Q |
115 |
gaacattttcttcttcattttttaaattttgaaaccaagccagattgatacaggtacattgaaattgaatatttatgattttaggtccaaagtgtaactg |
214 |
Q |
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| T |
33503585 |
gaacattttcttcttcatttttaaaaatttgaaaccaagccagattgatacaagtac------attgaatatttatgattttaggtccaaagtgtaactg |
33503492 |
T |
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| Q |
215 |
gttacttactcttact |
230 |
Q |
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|||||||||||||||| |
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| T |
33503491 |
gttacttactcttact |
33503476 |
T |
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