View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13706_high_4 (Length: 588)

Name: NF13706_high_4
Description: NF13706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13706_high_4
NF13706_high_4
[»] chr1 (46 HSPs)
chr1 (304-583)||(7042734-7043013)
chr1 (304-574)||(8969435-8969708)
chr1 (304-461)||(18604828-18604984)
chr1 (304-429)||(17926221-17926346)
chr1 (335-433)||(4490168-4490266)
chr1 (335-461)||(26770125-26770250)
chr1 (335-461)||(31760702-31760827)
chr1 (333-461)||(47533999-47534126)
chr1 (335-461)||(15475980-15476105)
chr1 (335-461)||(37094152-37094277)
chr1 (335-461)||(44054817-44054942)
chr1 (335-461)||(50490803-50490928)
chr1 (333-461)||(25828675-25828802)
chr1 (335-439)||(30361156-30361260)
chr1 (335-439)||(42885268-42885372)
chr1 (333-461)||(46674743-46674870)
chr1 (335-439)||(44234047-44234153)
chr1 (333-439)||(13556075-13556181)
chr1 (335-461)||(48542552-48542677)
chr1 (335-471)||(17580873-17581008)
chr1 (333-405)||(25729975-25730047)
chr1 (333-433)||(40359665-40359765)
chr1 (335-461)||(3770505-3770630)
chr1 (335-405)||(11335643-11335713)
chr1 (335-405)||(11493663-11493733)
chr1 (335-461)||(28226343-28226468)
chr1 (335-405)||(52469488-52469558)
chr1 (335-439)||(6978903-6979007)
chr1 (324-429)||(49740075-49740180)
chr1 (335-439)||(8895623-8895727)
chr1 (345-477)||(15907250-15907381)
chr1 (335-430)||(30159014-30159109)
chr1 (325-443)||(12320214-12320331)
chr1 (335-439)||(20599616-20599720)
chr1 (335-439)||(28068850-28068954)
chr1 (335-433)||(3046763-3046861)
chr1 (335-433)||(35719711-35719810)
chr1 (345-439)||(46234353-46234447)
chr1 (333-439)||(3416304-3416410)
chr1 (335-461)||(3994870-3994994)
chr1 (335-461)||(45502353-45502477)
chr1 (338-403)||(43106594-43106659)
chr1 (345-433)||(49456849-49456937)
chr1 (335-433)||(24180587-24180686)
chr1 (302-341)||(17136840-17136879)
chr1 (333-365)||(641456-641488)
[»] chr5 (23 HSPs)
chr5 (306-575)||(8935772-8936041)
chr5 (304-439)||(8782705-8782840)
chr5 (305-444)||(33570086-33570224)
chr5 (335-439)||(8836552-8836656)
chr5 (335-461)||(3390832-3390957)
chr5 (335-461)||(42675659-42675784)
chr5 (335-438)||(10691933-10692036)
chr5 (334-461)||(36484601-36484727)
chr5 (335-477)||(25031425-25031566)
chr5 (333-461)||(29296186-29296313)
chr5 (335-439)||(15472688-15472792)
chr5 (335-475)||(23191870-23192009)
chr5 (333-461)||(42221725-42221852)
chr5 (335-461)||(33591695-33591820)
chr5 (335-433)||(41743388-41743486)
chr5 (335-442)||(18185763-18185870)
chr5 (335-430)||(27771290-27771385)
chr5 (335-433)||(8335320-8335418)
chr5 (335-433)||(28349035-28349133)
chr5 (335-461)||(35066045-35066169)
chr5 (333-439)||(1420968-1421074)
chr5 (335-433)||(6230225-6230323)
chr5 (305-371)||(25472379-25472445)
[»] chr6 (27 HSPs)
chr6 (304-575)||(2559701-2559974)
chr6 (311-573)||(20554672-20554938)
chr6 (304-431)||(11590217-11590344)
chr6 (308-439)||(9576004-9576135)
chr6 (304-439)||(9224566-9224703)
chr6 (304-443)||(12713108-12713247)
chr6 (335-461)||(8062791-8062916)
chr6 (333-433)||(32938433-32938533)
chr6 (335-461)||(4169666-4169791)
chr6 (335-461)||(4210395-4210520)
chr6 (333-439)||(5545371-5545477)
chr6 (329-439)||(8313783-8313893)
chr6 (335-461)||(17595869-17595994)
chr6 (337-461)||(33131138-33131261)
chr6 (334-461)||(8933810-8933936)
chr6 (335-461)||(33489794-33489919)
chr6 (336-461)||(742856-742980)
chr6 (335-439)||(28914151-28914255)
chr6 (335-461)||(8658989-8659117)
chr6 (335-433)||(10790493-10790591)
chr6 (335-442)||(18676725-18676833)
chr6 (335-406)||(29516667-29516738)
chr6 (335-439)||(34475145-34475249)
chr6 (309-488)||(8978117-8978291)
chr6 (327-380)||(25144160-25144213)
chr6 (309-368)||(24418674-24418733)
chr6 (338-382)||(13889147-13889191)
[»] chr8 (32 HSPs)
chr8 (20-188)||(11346088-11346259)
chr8 (307-429)||(5458233-5458355)
chr8 (335-433)||(25487249-25487347)
chr8 (335-461)||(27719243-27719368)
chr8 (333-439)||(45084244-45084350)
chr8 (335-439)||(20818956-20819060)
chr8 (333-461)||(38098782-38098909)
chr8 (335-461)||(35393519-35393644)
chr8 (305-442)||(1104960-1105097)
chr8 (335-439)||(26416318-26416422)
chr8 (335-433)||(8352381-8352479)
chr8 (335-461)||(30700014-30700139)
chr8 (337-461)||(30655004-30655127)
chr8 (335-433)||(12986672-12986770)
chr8 (304-442)||(13174207-13174346)
chr8 (335-461)||(483155-483280)
chr8 (335-461)||(11020404-11020529)
chr8 (335-477)||(24757750-24757890)
chr8 (335-461)||(29997495-29997620)
chr8 (335-439)||(36781653-36781757)
chr8 (307-461)||(18574772-18574920)
chr8 (335-439)||(20187473-20187577)
chr8 (335-439)||(20206542-20206646)
chr8 (335-461)||(33411046-33411172)
chr8 (335-433)||(39780313-39780412)
chr8 (335-405)||(31097516-31097586)
chr8 (337-433)||(32834592-32834688)
chr8 (361-519)||(20524969-20525125)
chr8 (325-382)||(29225977-29226034)
chr8 (309-379)||(16584399-16584468)
chr8 (65-137)||(11360026-11360098)
chr8 (217-255)||(11360642-11360680)
[»] chr3 (53 HSPs)
chr3 (304-571)||(5218943-5219217)
chr3 (304-439)||(35513084-35513219)
chr3 (335-461)||(20607694-20607819)
chr3 (333-439)||(26717991-26718097)
chr3 (324-432)||(501729-501837)
chr3 (333-461)||(22497239-22497366)
chr3 (335-461)||(1546187-1546312)
chr3 (333-439)||(43218755-43218861)
chr3 (333-433)||(17338509-17338609)
chr3 (304-439)||(41454216-41454351)
chr3 (441-536)||(50744258-50744353)
chr3 (335-461)||(10471357-10471482)
chr3 (335-461)||(30357252-30357377)
chr3 (335-461)||(35846748-35846873)
chr3 (335-461)||(37126634-37126759)
chr3 (335-461)||(43973234-43973359)
chr3 (335-461)||(51754424-51754549)
chr3 (333-439)||(53018980-53019086)
chr3 (335-432)||(37821063-37821160)
chr3 (335-439)||(46528091-46528195)
chr3 (333-461)||(48458385-48458512)
chr3 (335-442)||(28555188-28555295)
chr3 (346-477)||(41114091-41114221)
chr3 (335-461)||(24348804-24348929)
chr3 (337-439)||(24405774-24405876)
chr3 (335-433)||(31655046-31655144)
chr3 (335-461)||(44377783-44377908)
chr3 (335-461)||(51167180-51167305)
chr3 (335-461)||(10049118-10049243)
chr3 (335-461)||(8828619-8828744)
chr3 (335-461)||(10659527-10659652)
chr3 (335-461)||(13286931-13287056)
chr3 (335-439)||(5273604-5273708)
chr3 (335-439)||(2445962-2446066)
chr3 (335-439)||(38252520-38252624)
chr3 (335-439)||(47697769-47697873)
chr3 (335-461)||(8068525-8068650)
chr3 (338-461)||(49804864-49804986)
chr3 (335-461)||(55274150-55274275)
chr3 (335-405)||(26229373-26229443)
chr3 (335-439)||(998342-998446)
chr3 (335-442)||(3019203-3019310)
chr3 (337-433)||(23150742-23150838)
chr3 (335-454)||(12227760-12227879)
chr3 (304-398)||(9126357-9126450)
chr3 (304-398)||(9134464-9134557)
chr3 (335-461)||(9745945-9746069)
chr3 (335-433)||(27449492-27449590)
chr3 (309-371)||(9116497-9116559)
chr3 (335-381)||(26975548-26975594)
chr3 (313-400)||(50744389-50744476)
chr3 (368-438)||(33591124-33591194)
chr3 (306-355)||(7027128-7027177)
[»] chr4 (39 HSPs)
chr4 (309-482)||(41476622-41476794)
chr4 (333-461)||(49332093-49332220)
chr4 (333-461)||(54202330-54202457)
chr4 (335-461)||(17445621-17445746)
chr4 (304-461)||(11308738-11308893)
chr4 (333-461)||(2491831-2491958)
chr4 (345-461)||(45884570-45884685)
chr4 (337-461)||(50621666-50621789)
chr4 (336-439)||(35949484-35949587)
chr4 (333-442)||(27767614-27767723)
chr4 (333-461)||(11005613-11005740)
chr4 (337-461)||(36308964-36309087)
chr4 (333-461)||(56162473-56162600)
chr4 (335-433)||(3875653-3875751)
chr4 (335-433)||(22169111-22169209)
chr4 (335-461)||(24744951-24745076)
chr4 (335-460)||(3874532-3874656)
chr4 (335-461)||(3931949-3932075)
chr4 (304-442)||(11381898-11382037)
chr4 (335-430)||(36225124-36225219)
chr4 (333-439)||(26488351-26488456)
chr4 (335-461)||(39677666-39677791)
chr4 (335-429)||(7327688-7327782)
chr4 (312-439)||(43957841-43957968)
chr4 (313-439)||(44878022-44878148)
chr4 (335-405)||(28573784-28573854)
chr4 (335-433)||(36432475-36432572)
chr4 (333-438)||(29933516-29933621)
chr4 (316-461)||(7326399-7326544)
chr4 (335-439)||(7554422-7554526)
chr4 (337-461)||(29923605-29923728)
chr4 (335-461)||(28867676-28867801)
chr4 (335-433)||(33961789-33961887)
chr4 (335-405)||(20492505-20492575)
chr4 (337-439)||(55541828-55541930)
chr4 (335-442)||(55282451-55282558)
chr4 (345-430)||(41764681-41764765)
chr4 (309-359)||(23115277-23115327)
chr4 (309-377)||(7818464-7818532)
[»] chr2 (30 HSPs)
chr2 (333-461)||(2380291-2380418)
chr2 (335-477)||(33965429-33965570)
chr2 (335-461)||(26479852-26479977)
chr2 (333-461)||(19390571-19390698)
chr2 (438-574)||(18375744-18375884)
chr2 (333-439)||(12242742-12242848)
chr2 (335-461)||(21866983-21867108)
chr2 (335-461)||(25336526-25336651)
chr2 (337-461)||(39430259-39430382)
chr2 (335-439)||(4049461-4049564)
chr2 (335-461)||(41568706-41568831)
chr2 (335-433)||(8113689-8113787)
chr2 (335-461)||(11124333-11124458)
chr2 (335-461)||(14287451-14287576)
chr2 (335-461)||(30787143-30787268)
chr2 (337-461)||(2357341-2357464)
chr2 (438-575)||(18924990-18925130)
chr2 (335-477)||(2372076-2372217)
chr2 (335-461)||(20115063-20115188)
chr2 (335-433)||(31547301-31547399)
chr2 (335-439)||(17977767-17977872)
chr2 (335-477)||(11978764-11978905)
chr2 (335-433)||(6034413-6034512)
chr2 (337-433)||(1222650-1222746)
chr2 (309-371)||(43652906-43652968)
chr2 (335-379)||(17435356-17435400)
chr2 (331-384)||(932072-932125)
chr2 (441-534)||(9729418-9729511)
chr2 (331-383)||(9141715-9141767)
chr2 (336-380)||(35006464-35006508)
[»] scaffold0081 (1 HSPs)
scaffold0081 (304-435)||(11081-11212)
[»] chr7 (27 HSPs)
chr7 (333-461)||(40431280-40431407)
chr7 (335-457)||(47020478-47020599)
chr7 (333-461)||(42076334-42076461)
chr7 (304-439)||(3112101-3112236)
chr7 (335-461)||(3887672-3887797)
chr7 (335-461)||(5544309-5544434)
chr7 (335-461)||(9741231-9741356)
chr7 (335-461)||(18676761-18676886)
chr7 (335-461)||(31587923-31588048)
chr7 (333-439)||(42697406-42697512)
chr7 (335-439)||(47455052-47455156)
chr7 (335-439)||(30888418-30888522)
chr7 (337-433)||(31621940-31622036)
chr7 (335-461)||(44508505-44508631)
chr7 (335-461)||(12726223-12726348)
chr7 (335-439)||(44291054-44291158)
chr7 (335-430)||(9870437-9870532)
chr7 (343-461)||(44061818-44061935)
chr7 (335-461)||(12848442-12848567)
chr7 (335-461)||(41118782-41118907)
chr7 (305-384)||(38168128-38168207)
chr7 (335-461)||(40186711-40186836)
chr7 (345-405)||(40190129-40190188)
chr7 (335-386)||(38743302-38743353)
chr7 (304-371)||(39494855-39494922)
chr7 (324-439)||(27419059-27419174)
chr7 (336-384)||(37544993-37545041)
[»] scaffold0548 (1 HSPs)
scaffold0548 (304-461)||(5228-5383)
[»] scaffold0189 (1 HSPs)
scaffold0189 (333-439)||(27833-27939)
[»] scaffold0562 (2 HSPs)
scaffold0562 (335-433)||(6472-6570)
scaffold0562 (335-460)||(5351-5475)
[»] scaffold1360 (1 HSPs)
scaffold1360 (335-461)||(944-1070)
[»] scaffold0025 (1 HSPs)
scaffold0025 (335-407)||(20394-20466)
[»] scaffold0041 (1 HSPs)
scaffold0041 (335-461)||(105706-105831)
[»] scaffold0057 (1 HSPs)
scaffold0057 (335-461)||(42682-42804)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-132; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 304 - 583
Target Start/End: Complemental strand, 7043013 - 7042734
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  7043013 gactctttctagtctcaccccatataattctagttacacctaaatttatttaaaatcttacaataataccaaaattgccctcttcatgtaaatttctaaa 7042914  T
Q  404 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaa 503  Q
    || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7042913 aaccattctttcattatcattttgaaccctcacccctttttcacccacaaaccaccatggatatgcaatcaatacctacaaaaatcatcaattgaatcaa 7042814  T
Q  504 catctattccattgataagtactcgattcatacgagtgaatttcgtaaatttcttcgagtttctatttatcgaccctatg 583  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  7042813 catctattccattgataagtactcgattcatacgagtgaatttcataaatttcttcgagtttctatttatcggccctatg 7042734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 304 - 574
Target Start/End: Original strand, 8969435 - 8969708
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    |||||||| |||||| |  ||||||||||||||||| || |||||||||||||||| |||||||||||  ||||||  ||||||| ||||||||||||||    
T  8969435 gactctttttagtcttatcccatataattctagttatactcaaatttatttaaaattttacaataatactaaaatttccctcttcatgtaaatttctaaa 8969534  T
Q  404 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaa 503  Q
    |||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||||  ||||||||||||||||||| ||||||  ||||||||||||    
T  8969535 aatccttctttcattatcattctgaaccctcacccc-ttttctcgcacaaaccaccatagatatgcaatcaatacctactaaaatcgccaattgaatcaa 8969633  T
Q  504 catctattccattgataagtactcgattcatac----gagtgaatttcgtaaatttcttcgagtttctatttatc 574  Q
    ||||| ||||||||||| |||||||||||||||     |||||||||| ||||||||| ||| ||||||||||||    
T  8969634 catctcttccattgatacgtactcgattcatacaagtaagtgaatttcataaatttctccgaatttctatttatc 8969708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 304 - 461
Target Start/End: Original strand, 18604828 - 18604984
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| |||||||| |||||    
T  18604828 gactcttgctagtctcaccccatataattctggttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattactaaa 18604927  T
Q  404 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccat 461  Q
    || |  ||||| || |||||||||||||||||||||  ||||| ||||||| ||||||    
T  18604928 aacccatcttttatgatcattctgaaccctcacccc-atttcatccacaaatcaccat 18604984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 304 - 429
Target Start/End: Complemental strand, 17926346 - 17926221
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||| ||||||||||||||    
T  17926346 gactcttgctactctcaccccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattgtcatgttcgtgtaaatttctaaa 17926247  T
Q  404 aatcattctttcattatcattctgaa 429  Q
    || |  ||||| || |||||||||||    
T  17926246 aacccatcttttatgatcattctgaa 17926221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 4490266 - 4490168
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| || |||||||||||||||    
T  4490266 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttctaaaaactca-tcttttatgatcattctgaaccct 4490168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 26770250 - 26770125
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  26770250 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 26770151  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  26770150 acccc-ctttcatccacaaatcaccat 26770125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 31760827 - 31760702
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  31760827 agttacactcaaatttatttaaaattttacaataatataaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 31760728  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  31760727 acccc-ctttcatccacaaatcaccat 31760702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 47533999 - 47534126
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  47533999 ctagttacactcaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 47534098  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  47534099 ttacccc-ctttcatccacaaatcaccat 47534126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 15476105 - 15475980
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||| ||||||| ||||||||| |||||| |  ||||| ||||||||||||||||||     
T  15476105 agttacacccaaatttatttaaaattttacaataatacaaaaattgccctcttcatgtaaatttttaaaaacccatcttttattatcattctgaaccctt 15476006  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  15476005 acccc-ctttcatccacaaatcaccat 15475980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 37094277 - 37094152
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| |  |||||||||||||||     
T  37094277 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccctcttttacgatcattctgaaccctt 37094178  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  37094177 acccc-ctttcatccacaaatcaccat 37094152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 44054942 - 44054817
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||| ||||||||     
T  44054942 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattttgaaccctt 44054843  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    ||||| |||||| ||||||| ||||||    
T  44054842 acccc-ttttcatccacaaatcaccat 44054817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 50490803 - 50490928
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  50490803 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 50490902  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  50490903 acccc-ctttcatccacaaatcaccat 50490928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 25828675 - 25828802
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaacc 431  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||    
T  25828675 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaacc 25828773  T
Q  432 ctcacccctttttcacccacaaaccaccat 461  Q
    || |||||  ||||| ||||||| ||||||    
T  25828774 cttacccc-ctttcatccacaaatcaccat 25828802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 30361156 - 30361260
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||  ||||| || |||||||||||||||     
T  30361156 agttacattcaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttctaaaaatccatcttttatgatcattctgaaccctt 30361255  T
Q  435 acccc 439  Q
    |||||    
T  30361256 acccc 30361260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 42885268 - 42885372
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  42885268 agttacacccaaatttatttaaaattttacaataatacaaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 42885367  T
Q  435 acccc 439  Q
    |||||    
T  42885368 acccc 42885372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 46674743 - 46674870
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||  |  ||||| || ||||||||||||||    
T  46674743 ctagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaatcccatcttttatgatcattctgaaccc 46674842  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  46674843 ttacccc-ctttcatccacaaatcaccat 46674870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 44234153 - 44234047
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatat--caaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||| |||||||||||||||| |  ||||| || ||||||||||||||    
T  44234153 agttacacccaaatttatttaaaattttacaataatataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccc 44234054  T
Q  433 tcacccc 439  Q
    | |||||    
T  44234053 ttacccc 44234047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 13556075 - 13556181
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||| ||||| |||||| |  ||||| || ||||||||||||||    
T  13556075 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtcaatttttaaaaacccatcttttatgatcattctgaaccc 13556174  T
Q  433 tcacccc 439  Q
    | |||||    
T  13556175 ttacccc 13556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 48542677 - 48542552
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||    ||||| || |||||||||||||||     
T  48542677 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacacatcttttatgatcattctgaaccctt 48542578  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  48542577 acccc-ctttcatccacaaatcaccat 48542552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 335 - 471
Target Start/End: Complemental strand, 17581008 - 17580873
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||||| |||||| ||||| |||||||||| |  ||||| || |||||||||||| ||     
T  17581008 agttacatccaaatttatttaaaattttacaataataccaaaattgttctcttcatgtaattttctaaaaacctatcttttatgatcattctgaactctt 17580909  T
Q  435 acccctttttcacccacaaaccaccatgaatatgcaa 471  Q
    |||||  ||||| ||||||| ||||||  ||||||||    
T  17580908 acccc-ctttcatccacaaatcaccatagatatgcaa 17580873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 333 - 405
Target Start/End: Complemental strand, 25730047 - 25729975
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  25730047 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 25729975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 333 - 433
Target Start/End: Original strand, 40359665 - 40359765
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  40359665 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 40359764  T
Q  433 t 433  Q
    |    
T  40359765 t 40359765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 3770505 - 3770630
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  3770505 agttacacctaaatttatttaaaattttacaataataccaaaattgccttcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3770604  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  3770605 acccc-ctttcatccacaaatcaccat 3770630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 11335713 - 11335643
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  11335713 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 11335643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 11493733 - 11493663
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  11493733 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 11493663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 28226468 - 28226343
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || || ||||||||||||     
T  28226468 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccctt 28226369  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  28226368 acccc-ctttcatccacaaatcaccat 28226343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 52469558 - 52469488
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  52469558 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 52469488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 6978903 - 6979007
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||||||||| |||||| ||| ||||| || |||||||||||| ||    
T  6978903 agttacacccaaatttatttaaaattttacaataatatcaaaattgccttcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaactct 6979001  T
Q  434 cacccc 439  Q
     |||||    
T  6979002 tacccc 6979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 324 - 429
Target Start/End: Original strand, 49740075 - 49740180
Alignment:
Q  324 catataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcat 423  Q
    ||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||| |  ||||  || |||||    
T  49740075 catataattctagttacatttaaatttatttaaaattttacaataatatcaaaattgtcatgttcatgtaaatttctaaaaacccatcttatataatcat 49740174  T
Q  424 tctgaa 429  Q
    ||||||    
T  49740175 tctgaa 49740180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 8895623 - 8895727
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  8895623 agttacacccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 8895722  T
Q  435 acccc 439  Q
    |||||    
T  8895723 acccc 8895727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 345 - 477
Target Start/End: Original strand, 15907250 - 15907381
Alignment:
Q  345 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcaccccttttt 444  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| |||||||| |||||  |||    
T  15907250 aaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaacccttacccc-cttt 15907348  T
Q  445 cacccacaaaccaccatgaatatgcaatcaata 477  Q
    || ||||||| ||||||  || |||||||||||    
T  15907349 catccacaaatcaccatagatgtgcaatcaata 15907381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 30159014 - 30159109
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaac 430  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| ||| ||||| || ||||||||||||    
T  30159014 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaac 30159109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 325 - 443
Target Start/End: Complemental strand, 12320331 - 12320214
Alignment:
Q  325 atataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcatt 424  Q
    ||||||||||||||||||  ||||||| ||||||| |||||||||||||||||||||| |||   ||||||||| | |||||| || ||||||||||| |    
T  12320331 atataattctagttacacttaaatttacttaaaattttacaataatatcaaaattgtcttctcaatgtaaattt-ttaaaatctttttttcattatcact 12320233  T
Q  425 ctgaaccctcacccctttt 443  Q
     |||||| ||| |||||||    
T  12320232 ttgaaccttcatccctttt 12320214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 20599720 - 20599616
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||| |||||| ||||||||| ||||||    | ||| || |||||||||||||||     
T  20599720 agttacacccaaatttatttaaaattttacaataatactaaaattgttctcttcatgtaaatttttaaaaacttatattttatgatcattctgaaccctt 20599621  T
Q  435 acccc 439  Q
    |||||    
T  20599620 acccc 20599616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 28068954 - 28068850
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||  ||||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  28068954 agttacacataaatttatttaaaattttacaataataccaaacttgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 28068855  T
Q  435 acccc 439  Q
    |||||    
T  28068854 acccc 28068850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 3046763 - 3046861
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||| | ||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  3046763 agttacatctaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 3046861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 35719711 - 35719810
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  35719711 agttacacccaaatttatttaaaattttataataataccaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 35719810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 345 - 439
Target Start/End: Complemental strand, 46234447 - 46234353
Alignment:
Q  345 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccctcacccc 439  Q
    ||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| ||| ||||| || ||||||||||||||| |||||    
T  46234447 aaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaacccttacccc 46234353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 3416304 - 3416410
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||| | ||||||||||||||||| ||||||||||| |||||| | ||||||| ||||||||| |||||| |  ||||| || |||||| |||||||    
T  3416304 ctagttatatccaaatttatttaaaattttacaataataccaaaatcgccctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaaccc 3416403  T
Q  433 tcacccc 439  Q
    | |||||    
T  3416404 ttacccc 3416410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 3994994 - 3994870
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||| ||||| || |||||| |||||| |  ||||| || |||||||||||| ||     
T  3994994 agttacacccaaatttatttaaaattttacaataata-ccaaattgtcatcttcatgaaaatttttaaaaacccatcttttatgatcattctgaacactt 3994896  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  3994895 acccc-ctttcatccacaaatcaccat 3994870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 45502477 - 45502353
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||| ||||| | ||| ||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  45502477 agttacacccaaatttaattaaatt-ttataataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 45502379  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  45502378 acccc-ctttcatccacaaatcaccat 45502353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 43106659 - 43106594
Alignment:
Q  338 tacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||    
T  43106659 tacactcaaatttatttaaaattttacaataatatcaaaagtgtcctcttcatgtaaatttttaaa 43106594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 433
Target Start/End: Original strand, 49456849 - 49456937
Alignment:
Q  345 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||| |||||||||||  |||||| |||||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  49456849 aaatttatttaaaattttacaataatactaaaattatcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 49456937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 24180686 - 24180587
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||| ||| ||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  24180686 agttacacccaaatttatttaaaattttataataataccaaaattgcccttttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 24180587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 341
Target Start/End: Original strand, 17136840 - 17136879
Alignment:
Q  302 tcgactctttctagtctcactccatataattctagttaca 341  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  17136840 tcgactctttctagtctcattccatataattttagttaca 17136879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 365
Target Start/End: Original strand, 641456 - 641488
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttaca 365  Q
    ||||||||||||||||||||||||||| |||||    
T  641456 ctagttacacccaaatttatttaaaattttaca 641488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 306 - 575
Target Start/End: Complemental strand, 8936041 - 8935772
Alignment:
Q  306 ctctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  8936041 ctctttctagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttctaaaaa 8935942  T
Q  406 tcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaaca 505  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| |    
T  8935941 ccattctttcattatcattctgaaccctcatccctttttcacccacaaaccaccatggatatgaaatcaatacctacaaaaatcgtcaattgaatcaata 8935842  T
Q  506 tctattccattgataagtactcgattcatacgagtgaatttcgtaaatttcttcgagtttctatttatcg 575  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8935841 tctattccattgataagtactcgattcatacgagtgaatttcataaatttcttcgagtttctatttatcg 8935772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 304 - 439
Target Start/End: Complemental strand, 8782840 - 8782705
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| | ||| ||||||||||||||    
T  8782840 gactcttgctagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataatactaaaattgtcttgttcatgtaaatttctaaa 8782741  T
Q  404 aatcattctttcattatcattctgaaccctcacccc 439  Q
    || |  |||||||| |||||||||||  ||||||||    
T  8782740 aacccatctttcatgatcattctgaattctcacccc 8782705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 305 - 444
Target Start/End: Complemental strand, 33570224 - 33570086
Alignment:
Q  305 actctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaa 404  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||| |||||||||||||||    
T  33570224 actcttactagtctcac-ccatatgattctagttacacccaaatttatttaaaattttacaataataccaaaattgtcatgttcatgtaaatttctaaaa 33570126  T
Q  405 atcattctttcattatcattctgaaccctcaccccttttt 444  Q
    | |   |||| || |||||||||||  |||||||| ||||    
T  33570125 acccaccttttatgatcattctgaattctcaccccctttt 33570086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 8836656 - 8836552
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  8836656 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 8836557  T
Q  435 acccc 439  Q
    |||||    
T  8836556 acccc 8836552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 3390957 - 3390832
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  3390957 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3390858  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  3390857 acccc-ctttcatccacaaatcaccat 3390832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 42675784 - 42675659
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||||   ||||| || |||||||||||||||     
T  42675784 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 42675685  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  42675684 acccc-ctttcatccacaaatcaccat 42675659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 10692036 - 10691933
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  10692036 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 10691937  T
Q  435 accc 438  Q
    ||||    
T  10691936 accc 10691933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 36484727 - 36484601
Alignment:
Q  334 tagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    |||||||||| ||||||||||||| | ||||||||||| |||||||||||| ||| ||||||||| ||||||||  ||||| || |||||||||||||||    
T  36484727 tagttacacctaaatttatttaaatttttacaataataccaaaattgtccttttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 36484628  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     |||||  ||||| ||||||| ||||||    
T  36484627 tacccc-ctttcatccacaaatcaccat 36484601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 477
Target Start/End: Original strand, 25031425 - 25031566
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||| |||||| |  ||||| || ||||||||||| |||     
T  25031425 agttacacccaaatttatttaaaattttacaataatatcaaaattgcactcttcatgtaaatttttaaaaacccatcttttatgatcattctgaatcctt 25031524  T
Q  435 acccctttttcacccacaaaccaccatgaatatgcaatcaata 477  Q
    |||||  ||||| ||||||| |||| |  |||||||| |||||    
T  25031525 acccc-ctttcatccacaaatcaccgtagatatgcaaccaata 25031566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 29296186 - 29296313
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaacc 431  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||| || ||||||||||||     
T  29296186 ctagttacatctaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaact 29296284  T
Q  432 ctcacccctttttcacccacaaaccaccat 461  Q
    || | |||| ||||| ||||||| ||||||    
T  29296285 ctta-ccctctttcatccacaaatcaccat 29296313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 15472792 - 15472688
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||| |  ||||| || |||| ||||||||||     
T  15472792 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttttaaaaacccatcttttatgatcaatctgaaccctt 15472693  T
Q  435 acccc 439  Q
    |||||    
T  15472692 acccc 15472688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 335 - 475
Target Start/End: Complemental strand, 23192009 - 23191870
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||||||||||| |||||||| ||| |||||||  ||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  23192009 agttacacccaaatttgtttaaaattttataataatactaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 23191910  T
Q  435 acccctttttcacccacaaaccaccatgaatatgcaatcaa 475  Q
    |||||  ||||| ||||||| ||||||  || |||||||||    
T  23191909 acccc-ctttcatccacaaatcaccatagatgtgcaatcaa 23191870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 42221725 - 42221852
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  42221725 ctagttacactcaaatttatttaaaattttacaataataccaaaattgcactcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 42221824  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  42221825 ttacccc-ctttcatccacaaatcaccat 42221852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 33591820 - 33591695
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||| |||     
T  33591820 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaatcctt 33591721  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  33591720 acccc-ctttcatccacaaatcaccat 33591695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 41743486 - 41743388
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||   ||||| || |||||| ||||||||    
T  41743486 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattttgaaccct 41743388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 18185763 - 18185870
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  18185763 agttacacctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaactctt 18185862  T
Q  435 accccttt 442  Q
    ||||||||    
T  18185863 accccttt 18185870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 27771385 - 27771290
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaac 430  Q
    ||||||| ||||||||||||||||| | ||||||||| |||||||||| ||||| |||||||||||||||| |  ||||| || ||||||||||||    
T  27771385 agttacatccaaatttatttaaaatttaacaataataccaaaattgtcatcttcatgtaaatttctaaaaacccatcttttatgatcattctgaac 27771290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 8335320 - 8335418
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||  |||||| ||||||||| |||||| |  ||||| || |||||||||||||||    
T  8335320 agttacacttaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8335418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 28349035 - 28349133
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||| ||||||||||||||| | ||||||||| |||||||||| ||||| |||||||||||||||| |  ||||| || || ||||||||||||    
T  28349035 agttacacctaaatttatttaaaatttaacaataataccaaaattgtcatcttcatgtaaatttctaaaaacccatcttttatgatgattctgaaccct 28349133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 35066169 - 35066045
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| |||||| |  | ||| || |||||||||||||||     
T  35066169 agttacacccaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaacccat-ttttatgatcattctgaaccctt 35066071  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  35066070 acccc-ctttcatccacaaatcaccat 35066045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 1420968 - 1421074
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||  ||||||||||||||||| ||||||||||| |||||||| ||| ||| |||||| || |||||| |  ||||| || ||||||||||||||    
T  1420968 ctagttacctccaaatttatttaaaattttacaataataccaaaattgcccttttcatgtaaaattttaaaaacccatcttttatgatcattctgaaccc 1421067  T
Q  433 tcacccc 439  Q
    | |||||    
T  1421068 ttacccc 1421074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 6230225 - 6230323
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||  ||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||| |||||| ||| | ||| || |||||||||||||||    
T  6230225 agttacacttaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaactca-tattttatgatcattctgaaccct 6230323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 371
Target Start/End: Complemental strand, 25472445 - 25472379
Alignment:
Q  305 actctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataata 371  Q
    |||||||||| |||||| ||||||| || |||||||||||||||||||||||||| ||| |||||||    
T  25472445 actctttctaatctcaccccatatagttttagttacacccaaatttatttaaaattttataataata 25472379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 9e-87; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 304 - 575
Target Start/End: Original strand, 2559701 - 2559974
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| ||| ||||||| |||||||| ||||||| ||| ||||||||||    
T  2559701 gactctttctagtctcgccccatataattctagttacaccaaaatttatttaaaattttataataataccaaaattgccctcttcatgtcaatttctaaa 2559800  T
Q  404 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaa 503  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||  ||||||   |||||||||||    
T  2559801 aatc-ttctttcattatcattttgaaccctcacccc-ttttcacccacaaaccaccatggatatgcaatcaatacctaataaaatcgctaattgaatcaa 2559898  T
Q  504 catctattccattgataagtactcgattcatacgag----tgaatttcgtaaatttcttcgagtttctatttatcg 575  Q
    ||||| ||||||||||| ||||||||||||||| ||    |||||||| |||||||||||||||||||||||||||    
T  2559899 catctcttccattgatatgtactcgattcatacaagtaaatgaatttcataaatttcttcgagtttctatttatcg 2559974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 311 - 573
Target Start/End: Complemental strand, 20554938 - 20554672
Alignment:
Q  311 tctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcatt 410  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||||||   ||||||||||  ||||||  ||||||| ||||||||||||||||   ||    
T  20554938 tctagtctcaccccatataattctagttacatctaaatttatttaaaactgtacaataatactaaaattaccctcttcatgtaaatttctaaaaactctt 20554839  T
Q  411 ctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctat 510  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |    
T  20554838 ctttcattatcattctgaacgctcacccttttttcactcacaaaccaccatggatatgcaatcaatacctactaaaatcaccaattgaatcaacatctct 20554739  T
Q  511 tccattgataagtactcgattcatac----gagtgaatttcgtaaatttcttcgagtttctatttat 573  Q
    | |||||||| |||||||||||||||     |||||||||| |||||||  ||||||||||||||||    
T  20554738 ttcattgatacgtactcgattcatacaagtaagtgaatttcataaatttaatcgagtttctatttat 20554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 304 - 431
Target Start/End: Original strand, 11590217 - 11590344
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||   |||||| ||||||||||||||    
T  11590217 gactatttctagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattacactcttcatgtaaatttctaaa 11590316  T
Q  404 aatcattctttcattatcattctgaacc 431  Q
    |||| |||||||||||||||||||||||    
T  11590317 aatccttctttcattatcattctgaacc 11590344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 439
Target Start/End: Original strand, 9576004 - 9576135
Alignment:
Q  308 ctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatc 407  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||  ||| || |||||||||||||||| |    
T  9576004 ctttctagtttcaccccatataattctagttacacacaaatttatttaaaattttacaataatactaaaattgctctcatcatgtaaatttctaaaaacc 9576103  T
Q  408 attctttcattatcattctgaaccctcacccc 439  Q
     |||||||||||||||||||||||||||||||    
T  9576104 cttctttcattatcattctgaaccctcacccc 9576135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 304 - 439
Target Start/End: Original strand, 9224566 - 9224703
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacaccc--aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttcta 401  Q
    |||||||||||||||||| ||||||||||||||||||| |   ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| |     
T  9224566 gactctttctagtctcaccccatataattctagttacatctgaaaatttatttaaaattttacaacaatatcaaaattgtcctcttcatgtaaatttttt 9224665  T
Q  402 aaaatcattctttcattatcattctgaaccctcacccc 439  Q
    |||| | |||||||||||||||| ||||||||||||||    
T  9224666 aaaacccttctttcattatcattttgaaccctcacccc 9224703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 304 - 443
Target Start/End: Complemental strand, 12713247 - 12713108
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||    
T  12713247 gactcttgctagtctcacctcatataattctagttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaa 12713148  T
Q  404 aatcattctttcattatcattctgaaccctcacccctttt 443  Q
    |  |  ||||| || |||||||||||||||| ||||||||    
T  12713147 accccatcttttatgatcattctgaaccctcgcccctttt 12713108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 8062791 - 8062916
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||| |||||||||| |  ||||| || |||||||||||||||     
T  8062791 agttacacccaaatttatttaaaattttataataataccaaaattgtcctcttcatgtaattttctaaaaacccatcttttatgatcattctgaaccctt 8062890  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    ||||| |||||| ||||||| ||||||    
T  8062891 acccc-ttttcatccacaaatcaccat 8062916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 333 - 433
Target Start/End: Complemental strand, 32938533 - 32938433
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || ||||||||||||||    
T  32938533 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccc 32938434  T
Q  433 t 433  Q
    |    
T  32938433 t 32938433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 4169666 - 4169791
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  4169666 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 4169765  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  4169766 acccc-ctttcatccacaaatcaccat 4169791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 4210395 - 4210520
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  4210395 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 4210494  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  4210495 acccc-ctttcatccacaaatcaccat 4210520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 5545371 - 5545477
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  5545371 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 5545470  T
Q  433 tcacccc 439  Q
    | |||||    
T  5545471 ttacccc 5545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 329 - 439
Target Start/End: Complemental strand, 8313893 - 8313783
Alignment:
Q  329 aattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctga 428  Q
    |||| ||||||||| | ||||||| |||||| |||||||||||||| ||||||||||||| ||||||||| |||||| | || |||||||||||||| ||    
T  8313893 aattatagttacactcgaatttatataaaattttacaataatatcataattgtcctcttcatgtaaatttgtaaaaacctttatttcattatcattccga 8313794  T
Q  429 accctcacccc 439  Q
    |||||||||||    
T  8313793 accctcacccc 8313783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 17595994 - 17595869
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  17595994 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 17595895  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  17595894 acccc-ctttcatccacaaatcaccat 17595869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 33131261 - 33131138
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 436  Q
    ||||||||||||||||||||| | |||||||||||  ||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||| ||    
T  33131261 ttacacccaaatttatttaaatttttacaataatactaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttac 33131162  T
Q  437 ccctttttcacccacaaaccaccat 461  Q
    |||  ||||| ||||||| ||||||    
T  33131161 ccc-ctttcatccacaaatcaccat 33131138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 461
Target Start/End: Complemental strand, 8933936 - 8933810
Alignment:
Q  334 tagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||| |||||||||||    
T  8933936 tagttacacccaaatttatttaaaattttactataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccct 8933837  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     |||||  ||||| ||||||| ||||||    
T  8933836 tacccc-ctttcatccacaaatcaccat 8933810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 33489794 - 33489919
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  33489794 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 33489892  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     |||||  ||||| ||||||| ||||||    
T  33489893 tacccc-ctttcatccacaaatcaccat 33489919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 336 - 461
Target Start/End: Complemental strand, 742980 - 742856
Alignment:
Q  336 gttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctca 435  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| ||||||||  ||||| || ||||||||||||||| |    
T  742980 gttacactcaaatttatttaaaattttacaataataccaaaattgctctcttcgtgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 742881  T
Q  436 cccctttttcacccacaaaccaccat 461  Q
    ||||  ||||| ||||||| ||||||    
T  742880 cccc-ctttcatccacaaatcaccat 742856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 28914255 - 28914151
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||   |||||| ||||||||| |||||| || ||||| || |||||||||||||||     
T  28914255 agttacacctaaatttatttaaaattttacaataatatcaaaattactctcttcatgtaaatttttaaaaaccaatcttttatgatcattctgaaccctt 28914156  T
Q  435 acccc 439  Q
    |||||    
T  28914155 acccc 28914151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 8658989 - 8659117
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcatt---atcattctgaacc 431  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| |||   |||||| ||||||    
T  8658989 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatctttaattatgatcattttgaacc 8659088  T
Q  432 ctcacccctttttcacccacaaaccaccat 461  Q
    || |||||  ||||| ||||||| ||||||    
T  8659089 cttacccc-ctttcatccacaaatcaccat 8659117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 10790493 - 10790591
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  10790493 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 10790591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 442
Target Start/End: Complemental strand, 18676833 - 18676725
Alignment:
Q  335 agttacacccaaatttatttaaaatctt-acaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||| ||||||||||||||| || | ||||||| |||||||||||||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  18676833 agttacacctaaatttatttaaaatttttataataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 18676734  T
Q  434 caccccttt 442  Q
     ||||||||    
T  18676733 taccccttt 18676725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 29516667 - 29516738
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaat 406  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||||    
T  29516667 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaat 29516738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 34475145 - 34475249
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||| | ||||||||||| ||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  34475145 agttacatctaaatttatttacaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 34475243  T
Q  434 cacccc 439  Q
     |||||    
T  34475244 tacccc 34475249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 488
Target Start/End: Complemental strand, 8978291 - 8978117
Alignment:
Q  309 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatca 408  Q
    ||||||||||||  ||||| |||||||||||||   ||||||| ||||||| |||||||||||||  ||||   ||||   ||||||||| |  ||| |     
T  8978291 tttctagtctcatgccatacaattctagttacatttaaatttacttaaaattttacaataatatcgtaatt---ctctctgtgtaaattt-tctaaacct 8978196  T
Q  409 ttctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaat 488  Q
    || ||||||||||| | |||||| ||||||||||| ||||||||||||| |||| |  ||||| |||||||||| |||||    
T  8978195 ttttttcattatcactttgaaccttcacccctttt-cacccacaaaccatcatggaagtgcaaccaatacctaccaaaat 8978117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 25144213 - 25144160
Alignment:
Q  327 ataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattg 380  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||    
T  25144213 ataattctagttacactcaaatttacttaaaattttacaataataccaaaattg 25144160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 24418674 - 24418733
Alignment:
Q  309 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaata 368  Q
    ||||||||| ||| | ||||| |||||||||||||| |||||||||||||| ||| ||||    
T  24418674 tttctagtcgcaccctatatatttctagttacaccccaatttatttaaaattttagaata 24418733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 13889191 - 13889147
Alignment:
Q  338 tacacccaaatttatttaaaatcttacaataatatcaaaattgtc 382  Q
    |||||| ||||||| ||||||| ||||||||||| ||||||||||    
T  13889191 tacacctaaatttacttaaaattttacaataataccaaaattgtc 13889147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 1e-76; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 11346088 - 11346259
Alignment:
Q  20 gaacactggtggtaatggtaacttattctttttcatgtccttttccttcttcttcat---catcatcatcaacttgtaataccttgttatcttcttcaac 116  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  11346088 gaacacaggtggtaatggtaacttattctttttcatgttcttttccttcttcttcatcatcatcatcatcaacttgtaataccttgttatcttcttcaac 11346187  T
Q  117 ctttggaagggtttctgagttcggcggtttaggttgaagtgttaaccctaacaaaagcaaaacaatttgtcc 188  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11346188 ctttggaagggtttccgagttcggcggtttaggttgaagtgttaaccctaacaaaagcaaaacaatttgtcc 11346259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 307 - 429
Target Start/End: Original strand, 5458233 - 5458355
Alignment:
Q  307 tctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaat 406  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||     
T  5458233 tcttgctagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaac 5458332  T
Q  407 cattctttcattatcattctgaa 429  Q
    |  ||||| || |||||||||||    
T  5458333 ccatcttttatgatcattctgaa 5458355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 25487347 - 25487249
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||  ||||| || |||||||||||||||    
T  25487347 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttctaaaaatccatcttttatgatcattctgaaccct 25487249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 27719243 - 27719368
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  27719243 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 27719342  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    | |||| ||||| ||||||| ||||||    
T  27719343 a-ccctctttcatccacaaatcaccat 27719368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 45084244 - 45084350
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  45084244 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 45084343  T
Q  433 tcacccc 439  Q
    | |||||    
T  45084344 ttacccc 45084350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 20818956 - 20819060
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  20818956 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 20819055  T
Q  435 acccc 439  Q
    |||||    
T  20819056 acccc 20819060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 333 - 461
Target Start/End: Complemental strand, 38098909 - 38098782
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  38098909 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 38098810  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  38098809 ttacccc-ctttcatccacaaatcaccat 38098782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 35393644 - 35393519
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  35393644 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 35393545  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  35393544 acccc-ctttcatccacaaatcaccat 35393519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 305 - 442
Target Start/End: Complemental strand, 1105097 - 1104960
Alignment:
Q  305 actctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaa 404  Q
    |||||| ||||||||||  ||||||||||| |||||||| ||||||||||||||| ||||||||||| ||||||||   ||||| |||||||| ||||||    
T  1105097 actcttgctagtctcacctcatataattctggttacacctaaatttatttaaaattttacaataataccaaaattgctttcttcatgtaaattactaaaa 1104998  T
Q  405 atcattctttcattatcattctgaaccctcaccccttt 442  Q
    | |  ||||| || || ||||||||| |||||||||||    
T  1104997 acccatcttttatgataattctgaactctcaccccttt 1104960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 26416422 - 26416318
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| |  ||||| || || ||||||||||||     
T  26416422 agttacatccaaatttatttaaaattttacaataatatcaaaatggtcctcttcatgtaaatttctaaaaacccatcttttatgattattctgaaccctt 26416323  T
Q  435 acccc 439  Q
    |||||    
T  26416322 acccc 26416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 8352381 - 8352479
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||    
T  8352381 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8352479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 30700139 - 30700014
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||||  ||||||||| |||||||   ||||| || |||||||||||||||     
T  30700139 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctctttgtgtaaatttttaaaaattcatcttttatgatcattctgaaccctt 30700040  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  30700039 acccc-ctttcatccacaaatcaccat 30700014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 30655004 - 30655127
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 436  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  | ||| || ||||||||||||||| ||    
T  30655004 ttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacctattttttatgatcattctgaacccttac 30655103  T
Q  437 ccctttttcacccacaaaccaccat 461  Q
    |||  ||||| ||||||| ||||||    
T  30655104 ccc-ctttcatccacaaatcaccat 30655127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 12986672 - 12986770
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  12986672 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcgtgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 12986770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 304 - 442
Target Start/End: Original strand, 13174207 - 13174346
Alignment:
Q  304 gactctttctagtctcactc-catataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaa 402  Q
    |||||||||||||||||| | ||||||||| ||||||||| |||||||| ||||||| ||||||||||| | |||||  |||||||  |||||||| |||    
T  13174207 gactctttctagtctcaccctcatataattttagttacactcaaatttacttaaaattttacaataataccgaaattagcctcttcaagtaaatttttaa 13174306  T
Q  403 aaatcattctttcattatcattctgaaccctcaccccttt 442  Q
    ||| | || |||||| |||||| |||||  ||||||||||    
T  13174307 aaacccttttttcatgatcattatgaacattcaccccttt 13174346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 483280 - 483155
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || |||||| ||||||||     
T  483280 agttacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 483181  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  483180 acccc-ctttcatccacaaatcaccat 483155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 11020404 - 11020529
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||| ||||||| | ||||||| |||||| |  ||||| || |||||||||||||||     
T  11020404 agttacacccgaatttatttaaaattttacaataataccaaaattgccctcttcatataaatttttaaaaacccatcttttatgatcattctgaaccctt 11020503  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  11020504 acccc-ctttcatccacaaatcaccat 11020529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 477
Target Start/End: Complemental strand, 24757890 - 24757750
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  | ||| || |||||||||||| ||     
T  24757890 agttacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccat-ttttatgatcattctgaactctt 24757792  T
Q  435 acccctttttcacccacaaaccaccatgaatatgcaatcaata 477  Q
    ||||| |||||| ||||||| ||||||  || |||||||||||    
T  24757791 acccc-ttttcatccacaaatcaccatagatgtgcaatcaata 24757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 29997495 - 29997620
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||| |||||| |  ||||| || || ||||||||||||     
T  29997495 agttacacccaaatttatttaaaattttacaataataccaaaattgccttcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccctt 29997594  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  29997595 acccc-ctttcatccacaaatcaccat 29997620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 36781653 - 36781757
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||| ||||||||    
T  36781653 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattttgaaccct 36781751  T
Q  434 cacccc 439  Q
     |||||    
T  36781752 tacccc 36781757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 307 - 461
Target Start/End: Original strand, 18574772 - 18574920
Alignment:
Q  307 tctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaat 406  Q
    |||||||||||||||  |||||||||||||||||||| | ||||||||      ||||||||||| |||||||  ||||||| ||||||||| ||||||     
T  18574772 tctttctagtctcacagcatataattctagttacacctagatttattt------ttacaataataccaaaattaccctcttcatgtaaatttgtaaaaaa 18574865  T
Q  407 c-attctttcattatcattctgaaccctcacccctttttcacccacaaaccaccat 461  Q
    |  ||||| |||||||||| ||||||||||||||  ||||| ||||||| ||||||    
T  18574866 ctcttcttccattatcattttgaaccctcacccc-ctttcatccacaaatcaccat 18574920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 20187473 - 20187577
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  20187473 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 20187572  T
Q  435 acccc 439  Q
    |||||    
T  20187573 acccc 20187577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 20206542 - 20206646
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  20206542 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 20206641  T
Q  435 acccc 439  Q
    |||||    
T  20206642 acccc 20206646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 33411046 - 33411172
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaa-tttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||| ||| |||||| |  ||||| || |||||| ||||||||    
T  33411046 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttttaaaaacccatcttttatgatcattttgaaccct 33411145  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     | |||| ||||| ||||||| ||||||    
T  33411146 ta-ccctctttcatccacaaatcaccat 33411172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 39780313 - 39780412
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  39780313 agttacacccaaatttatttaaaattttataataatatcaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 39780412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 31097516 - 31097586
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||||    
T  31097516 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttttaaaaa 31097586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 337 - 433
Target Start/End: Original strand, 32834592 - 32834688
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||||||  | ||| || || ||||||||||||    
T  32834592 ttacacctaaatttatttaaaattttacaataataccaaaattgtcatcttcatgtaaatttttaaaaatccattttttatgattattctgaaccct 32834688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 361 - 519
Target Start/End: Original strand, 20524969 - 20525125
Alignment:
Q  361 ttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccacca 460  Q
    ||||||||||| | |||||||| ||||| ||||||||| | |||| | |||||||||||||| | |||||| | | ||| |||||||||| ||| || ||    
T  20524969 ttacaataataccgaaattgtcttcttcatgtaaattttttaaaa-ccttctttcattatcactttgaacctttatccc-ttttcacccaaaaatcatca 20525066  T
Q  461 tgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgat 519  Q
    || || ||||||||||| |||| ||||  |   ||||||||||||||| || |||||||    
T  20525067 tggatgtgcaatcaatatctaccaaaactaaagattgaatcaacatctttttcattgat 20525125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 29226034 - 29225977
Alignment:
Q  325 atataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtc 382  Q
    |||||||||||||||||    |||||||||||||| ||||||||||||||||||||||    
T  29226034 atataattctagttacaatgcaatttatttaaaattttacaataatatcaaaattgtc 29225977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 379
Target Start/End: Original strand, 16584399 - 16584468
Alignment:
Q  309 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaatt 379  Q
    ||||||||| ||||| ||||| |||| |||||||||||||||| ||||||| ||| ||||||| |||||||    
T  16584399 tttctagtcacactctatata-ttctggttacacccaaatttacttaaaattttataataataccaaaatt 16584468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 11360026 - 11360098
Alignment:
Q  65 cttcttcttcatcatcatcatcaacttgtaataccttgttatcttcttcaacctttggaagggtttctgagtt 137  Q
    |||||||||| | ||  ||||||||||| |||||||  ||||||||||||||||| | |||||||| ||||||    
T  11360026 cttcttcttcttgatgctcatcaacttggaatacctcattatcttcttcaaccttagaaagggtttatgagtt 11360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 11360642 - 11360680
Alignment:
Q  217 ttgtgcagtgggccaaagttgtaaatggcccaggtgttt 255  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  11360642 ttgtgcagtgggccaaagttgtaaatggcctaggcgttt 11360680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 304 - 571
Target Start/End: Original strand, 5218943 - 5219217
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| || || | | ||||||||||||    
T  5218943 gactctttctagtctcatcccatataattccagttacacccaaatttatttaaaattttacaataataccaaaattgccccctccatctaaatttctaaa 5219042  T
Q  404 aatcattctttcattatcattctgaa-------ccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaatt 496  Q
     |   |||| ||||||||||||||||        |||||| ||| ||| ||||||||||||||||| |||||||||||||| |||| |       |||||    
T  5219043 gacacttctctcattatcattctgaaatctgattcctcactcctcttttacccacaaaccaccatggatatgcaatcaatatctacta----tgccaatt 5219138  T
Q  497 gaatcaacatctattccattgataagtactcgattcatac----gagtgaatttcgtaaatttcttcgagtttctattt 571  Q
    |||||||||||| ||||||||||| |||||||||||||||     |||||||||| ||||||| |||||||||||||||    
T  5219139 gaatcaacatctcttccattgatacgtactcgattcatacaagtaagtgaatttcataaatttattcgagtttctattt 5219217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 304 - 439
Target Start/End: Complemental strand, 35513219 - 35513084
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    |||||||||||||||||   |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| ||||||| |||| |||| ||||    
T  35513219 gactctttctagtctcatctcatataattctagttacatctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtagatttttaaa 35513120  T
Q  404 aatcattctttcattatcattctgaaccctcacccc 439  Q
    || | ||||||||||||||||||||||| |||||||    
T  35513119 aacccttctttcattatcattctgaaccttcacccc 35513084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 20607819 - 20607694
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  20607819 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 20607720  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  20607719 acccc-ctttcatccacaaatcaccat 20607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 333 - 439
Target Start/End: Complemental strand, 26718097 - 26717991
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  26718097 ctagttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 26717998  T
Q  433 tcacccc 439  Q
    | |||||    
T  26717997 ttacccc 26717991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 324 - 432
Target Start/End: Original strand, 501729 - 501837
Alignment:
Q  324 catataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatca 422  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| || ||||    
T  501729 catataattctagttacatccaaatttatttaaaattttacaataatatcaaaattgttctcttcatgtaaatttctaaaaactca-tcttttatgatca 501827  T
Q  423 ttctgaaccc 432  Q
    ||||||||||    
T  501828 ttctgaaccc 501837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 22497239 - 22497366
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  22497239 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 22497338  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  22497339 ttacccc-ctttcatccacaaatcaccat 22497366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 1546312 - 1546187
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  1546312 agttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 1546213  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  1546212 acccc-ctttcatccacaaatcaccat 1546187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 43218755 - 43218861
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  43218755 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 43218854  T
Q  433 tcacccc 439  Q
    | |||||    
T  43218855 ttacccc 43218861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 333 - 433
Target Start/End: Complemental strand, 17338609 - 17338509
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  17338609 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 17338510  T
Q  433 t 433  Q
    |    
T  17338509 t 17338509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 304 - 439
Target Start/End: Original strand, 41454216 - 41454351
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||||| |||||||||  | |||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||| | ||| |||||||| |||||    
T  41454216 gactcttgctagtctcatcctatataagtctagttacacctaaatttatttaaaattttacaataataccaaaattgtctttttcatgtaaattactaaa 41454315  T
Q  404 aatcattctttcattatcattctgaaccctcacccc 439  Q
    || |  ||||| || ||||||||||||| |||||||    
T  41454316 aacccatcttttatgatcattctgaaccttcacccc 41454351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 441 - 536
Target Start/End: Complemental strand, 50744353 - 50744258
Alignment:
Q  441 ttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgataagtactcgattcatac 536  Q
    |||||||||| |||||||| || ||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||| |||||||||||||||    
T  50744353 ttttcacccagaaaccaccgtggatatgcaatcaatacctactaaaatcgccaattgaatcaacatctcttccattgatacgtactcgattcatac 50744258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 10471482 - 10471357
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||| |     
T  10471482 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccttt 10471383  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  10471382 acccc-ctttcatccacaaatcaccat 10471357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 30357252 - 30357377
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || |||||| ||||||||     
T  30357252 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattttgaaccctt 30357351  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  30357352 acccc-ctttcatccacaaatcaccat 30357377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 35846748 - 35846873
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  35846748 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 35846847  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  35846848 acccc-ctttcatccacaaatcaccat 35846873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 37126759 - 37126634
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  37126759 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 37126660  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  37126659 acccc-ctttcatccacaaatcaccat 37126634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 43973359 - 43973234
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  43973359 agttatacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 43973260  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  43973259 acccc-ctttcatccacaaatcaccat 43973234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 51754424 - 51754549
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  51754424 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 51754523  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  51754524 acccc-ctttcatccacaaatcaccat 51754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 53018980 - 53019086
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | |||||| |  ||||| || ||| ||||||||||    
T  53018980 ctagttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatgtttaaaaacccatcttttatgatcgttctgaaccc 53019079  T
Q  433 tcacccc 439  Q
    | |||||    
T  53019080 ttacccc 53019086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 335 - 432
Target Start/End: Original strand, 37821063 - 37821160
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  37821063 agttacacccaaatttatttaaaattttataataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 37821160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 46528091 - 46528195
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  46528091 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 46528190  T
Q  435 acccc 439  Q
    |||||    
T  46528191 acccc 46528195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 48458385 - 48458512
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  48458385 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 48458484  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  48458485 ttacccc-ctttcatccacaaatcaccat 48458512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 335 - 442
Target Start/End: Complemental strand, 28555295 - 28555188
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||    ||||| || |||||||||||||||     
T  28555295 agttacacccaaatttatttaaaattttacaataataccaaaattgtcttcttcatgtaaatttctaaaaacttatcttttatgatcattctgaaccctt 28555196  T
Q  435 accccttt 442  Q
    ||| ||||    
T  28555195 acctcttt 28555188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 346 - 477
Target Start/End: Complemental strand, 41114221 - 41114091
Alignment:
Q  346 aatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcacccctttttc 445  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||   ||||| || ||||||||||||||| |||||  ||||    
T  41114221 aatttatttaaaattttacaataatatcaaaattatcctcttcatgtaaatttttaaaaatttatcttttatgatcattctgaacccttacccc-ctttc 41114123  T
Q  446 acccacaaaccaccatgaatatgcaatcaata 477  Q
    | ||||||| ||||||  || |||||||||||    
T  41114122 atccacaaatcaccatagatgtgcaatcaata 41114091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 24348804 - 24348929
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  24348804 agttacacccaaatttatttaaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 24348903  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  24348904 acccc-ctttcatccacaaatcaccat 24348929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 337 - 439
Target Start/End: Original strand, 24405774 - 24405876
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 436  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||    
T  24405774 ttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 24405873  T
Q  437 ccc 439  Q
    |||    
T  24405874 ccc 24405876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 31655046 - 31655144
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| |||||||||||||||| |  ||||| || |||||||||||||||    
T  31655046 agttacacccaaatttatttaaaatttaacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccct 31655144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 44377783 - 44377908
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| ||||||||  ||||| || |||||||||||||||     
T  44377783 agttacacctaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 44377882  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  44377883 acccc-ctttcatccacaaatcaccat 44377908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 51167305 - 51167180
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| ||||||||     
T  51167305 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattatgaaccctt 51167206  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  51167205 acccc-ctttcatccacaaatcaccat 51167180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 10049243 - 10049118
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||| ||||||||    
T  10049243 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattatgaaccct 10049145  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     | |||| ||||| ||||||| ||||||    
T  10049144 ta-ccctctttcatccacaaatcaccat 10049118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 8828744 - 8828619
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||| |||||| |  ||||| || |||||||||||| ||     
T  8828744 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcgtcatgtaaatttttaaaaacccatcttttatgatcattctgaactctt 8828645  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  8828644 acccc-ctttcatccacaaatcaccat 8828619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 10659527 - 10659652
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||||  || || |  |||||||||||||||     
T  10659527 agttaaacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcgtttacgatcattctgaaccctt 10659626  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  10659627 acccc-ctttcatccacaaatcaccat 10659652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 13286931 - 13287056
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || || ||| ||||||||     
T  13286931 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgataattttgaaccctt 13287030  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  13287031 acccc-ctttcatccacaaatcaccat 13287056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 5273708 - 5273604
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||| ||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  5273708 agttacacccaaatttatttaaaattttacaataataccgaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 5273610  T
Q  434 cacccc 439  Q
     |||||    
T  5273609 tacccc 5273604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 2445962 - 2446066
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||| ||||| |||||| |  | ||| || |||||||||||||||     
T  2445962 agttacacctaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtgaatttttaaaaacccatattttatgatcattctgaaccctt 2446061  T
Q  435 acccc 439  Q
    |||||    
T  2446062 acccc 2446066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 38252520 - 38252624
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  38252520 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 38252619  T
Q  435 acccc 439  Q
    |||||    
T  38252620 acccc 38252624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 47697769 - 47697873
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| |||||| |  ||||| || |||| ||||||||||     
T  47697769 agttacacccaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaacccatcttttatgatcaatctgaaccctt 47697868  T
Q  435 acccc 439  Q
    |||||    
T  47697869 acccc 47697873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 8068650 - 8068525
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttc-taaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||| |||||||||| ||||| ||| | ||| || || ||||||||||||    
T  8068650 agttacacccaaatttatttaaaattttacaataataccaagattgccctcttcatgtaaatttcttaaaactca-tattttatgattattctgaaccct 8068552  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     ||||| |||||| ||||||| ||||||    
T  8068551 tacccc-ttttcatccacaaatcaccat 8068525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 338 - 461
Target Start/End: Complemental strand, 49804986 - 49804864
Alignment:
Q  338 tacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcacc 437  Q
    |||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||| |||    
T  49804986 tacatccaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaacccttacc 49804887  T
Q  438 cctttttcacccacaaaccaccat 461  Q
    ||  ||||| ||||||| ||||||    
T  49804886 cc-ctttcatccacaaatcaccat 49804864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 55274275 - 55274150
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| ||| ||||| || |||||| ||||| ||    
T  55274275 agttacatccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattatgaactct 55274177  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     |||||  ||||| ||||||| ||||||    
T  55274176 tacccc-ctttcatccacaaatcaccat 55274150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 26229373 - 26229443
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| | ||||||    
T  26229373 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatgtttaaaaa 26229443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 998446 - 998342
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||| | ||||| |||||||||||||||| |  | ||| || |||||||||||||||     
T  998446 agttacatccaaatttatttaaaattttacaataatactaaaattgccatcttcatgtaaatttctaaaaacccatgttttatgatcattctgaaccctt 998347  T
Q  435 acccc 439  Q
    |||||    
T  998346 acccc 998342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 3019203 - 3019310
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||| | ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  3019203 agttacatctaaatttatttaaaattttacaataatattaaaattgtcatcttcatgtaaatttttaaaaactca-tcttttataatcattctgaaccct 3019301  T
Q  434 caccccttt 442  Q
     | ||||||    
T  3019302 tatcccttt 3019310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 337 - 433
Target Start/End: Original strand, 23150742 - 23150838
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||| ||||||||||||| ||| ||||||| |||||||| ||||||| ||||||||| ||||||||  ||||| || |||||||| ||||||    
T  23150742 ttacacccatatttatttaaaattttataataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctaaaccct 23150838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 454
Target Start/End: Complemental strand, 12227879 - 12227760
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||  ||||||||||||||| ||||||||||| |||||||| |||||||  |||||||| |||||| |  ||||| || || ||||||||||||     
T  12227879 agttacacttaaatttatttaaaattttacaataataccaaaattgccctcttcacgtaaatttttaaaaacccatcttttatgattattctgaaccctt 12227780  T
Q  435 acccctttttcacccacaaa 454  Q
    |||||  ||||| |||||||    
T  12227779 acccccctttcatccacaaa 12227760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 398
Target Start/End: Complemental strand, 9126450 - 9126357
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaattt 398  Q
    |||| |||||||||||||  |||||||||||||||||||| ||||||| ||||||| ||||||||||| | |||||  ||||||| |||||||||    
T  9126450 gactttttctagtctcacatcatataattctagttacacctaaatttacttaaaattttacaataataccgaaatt-acctcttcatgtaaattt 9126357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 398
Target Start/End: Complemental strand, 9134557 - 9134464
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaattt 398  Q
    |||| |||||||||||||  |||||||||||||||||||| ||||||| ||||||| ||||||||||| | |||||  ||||||| |||||||||    
T  9134557 gactttttctagtctcacatcatataattctagttacacctaaatttacttaaaattttacaataataccgaaatt-acctcttcatgtaaattt 9134464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 9745945 - 9746069
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||||| |||||||||||| | |||||||||||  ||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  9745945 agttacacccgaatttatttaaatt-ttacaataatactaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 9746043  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    ||||| |||| | ||||||| ||||||    
T  9746044 accccctttt-atccacaaatcaccat 9746069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 27449492 - 27449590
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||    
T  27449492 agttacatctaaatttatttaaaattttacaataataccaaaatttccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 27449590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 9116559 - 9116497
Alignment:
Q  309 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataata 371  Q
    |||||||||||||  |||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  9116559 tttctagtctcacatcatataattctaattacacccaaatttacttaaaattttacaataata 9116497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 381
Target Start/End: Complemental strand, 26975594 - 26975548
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgt 381  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  26975594 agttacacctaaatttatttaaaattttactataatatcaaaattgt 26975548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 400
Target Start/End: Complemental strand, 50744476 - 50744389
Alignment:
Q  313 tagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttct 400  Q
    |||| |||| ||||||| |||||||||||||||| ||| |  ||||| ||||||||||||| ||| || ||||| | |||||| ||||    
T  50744476 tagtgtcaccccatatagttctagttacacccaattttttaaaaaattttacaataatatcgaaaatgccctctccatgtaaacttct 50744389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 438
Target Start/End: Original strand, 33591124 - 33591194
Alignment:
Q  368 aatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcaccc 438  Q
    |||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||||    
T  33591124 aataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttaccc 33591194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 7027177 - 7027128
Alignment:
Q  306 ctctttctagtctcactccatataattctagttacacccaaatttattta 355  Q
    |||||||||| ||||  ||||| |||||||||||||| ||||||||||||    
T  7027177 ctctttctagcctcatcccatacaattctagttacacacaaatttattta 7027128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 309 - 482
Target Start/End: Complemental strand, 41476794 - 41476622
Alignment:
Q  309 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatca 408  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||| ||||||  ||  ||||||||||||||   ||||||||||| |||| |     
T  41476794 tttctagtctcactccatataattctaattgcacccaaatttacttaaaattttacaacgatgccaaaattgtcctctctatgtaaatttcttaaaacct 41476695  T
Q  409 ttctttcattatcattctgaaccctcacccctttttcacccacaaaccaccatgaatatgcaatcaatacctac 482  Q
    || ||||||||||| | |||||| |||| || ||||||||||||||||||||||||| ||||| ||||||||||    
T  41476694 ttttttcattatcactttgaaccttcactcc-ttttcacccacaaaccaccatgaatgtgcaaccaatacctac 41476622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 333 - 461
Target Start/End: Complemental strand, 49332220 - 49332093
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  49332220 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 49332121  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  49332120 ttacccc-ctttcatccacaaatcaccat 49332093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 54202330 - 54202457
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  54202330 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 54202429  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  54202430 ttacccc-ctttcatccacaaatcaccat 54202457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 17445746 - 17445621
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  17445746 agttacacccaaatttatttaaaattttacaataataccaaaattatcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 17445647  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  17445646 acccc-ctttcatccacaaatcaccat 17445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 304 - 461
Target Start/End: Original strand, 11308738 - 11308893
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||||| || ||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||| ||| ||| ||||||||||||||    
T  11308738 gactcttgctggtctcac-ccatataattctagttacactcaaatttatttaaaattttacaattataccaaaattgccctgttcatgtaaatttctaaa 11308836  T
Q  404 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccat 461  Q
    || |  ||||| || |||||||||||  ||||||||  ||||| ||||||| ||||||    
T  11308837 aacccatcttttatgatcattctgaattctcacccc-ctttcatccacaaatcaccat 11308893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 2491831 - 2491958
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  2491831 ctagttacacccaaatttatttaaaatttaacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 2491930  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  2491931 ttacccc-ctttcatccacaaatcaccat 2491958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 345 - 461
Target Start/End: Original strand, 45884570 - 45884685
Alignment:
Q  345 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcaccccttttt 444  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||| |||||  |||    
T  45884570 aaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaacccttacccc-cttt 45884668  T
Q  445 cacccacaaaccaccat 461  Q
    || ||||||| ||||||    
T  45884669 catccacaaatcaccat 45884685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 50621666 - 50621789
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 436  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||    
T  50621666 ttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 50621765  T
Q  437 ccctttttcacccacaaaccaccat 461  Q
    |||  ||||| ||||||| ||||||    
T  50621766 ccc-ctttcatccacaaatcaccat 50621789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 336 - 439
Target Start/End: Complemental strand, 35949587 - 35949484
Alignment:
Q  336 gttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctca 435  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| ||||||||  ||||| || ||||||||||||||| |    
T  35949587 gttacacccaaatttatttaaaattttacaataataccaaaattgtcctctttatgtaaatttttaaaaatccatcttttatgatcattctgaaccctta 35949488  T
Q  436 cccc 439  Q
    ||||    
T  35949487 cccc 35949484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 27767723 - 27767614
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  27767723 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 27767624  T
Q  433 tcaccccttt 442  Q
    | ||||||||    
T  27767623 ttaccccttt 27767614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 333 - 461
Target Start/End: Complemental strand, 11005740 - 11005613
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  11005740 ctagttacacccaaatttatttaaaatttaacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 11005641  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  11005640 ttacccc-ctttcatccacaaatcaccat 11005613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 36309087 - 36308964
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 436  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||    
T  36309087 ttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 36308988  T
Q  437 ccctttttcacccacaaaccaccat 461  Q
     || |||||| ||||||| ||||||    
T  36308987 tcc-ttttcatccacaaatcaccat 36308964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 56162473 - 56162600
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  56162473 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 56162572  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  56162573 ttacccc-ctttcatccacaaatcaccat 56162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 3875751 - 3875653
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  | ||| || |||||||||||||||    
T  3875751 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatattttatgatcattctgaaccct 3875653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 22169111 - 22169209
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||||  ||||| || |||||||||||||||    
T  22169111 agttacacccgaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccct 22169209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 24745076 - 24744951
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||| | ||||||| ||||||||  ||||| || |||||||||||||||     
T  24745076 agttacacccaaatttatttacaattttacaataataccaaaattgccctcttcatataaatttttaaaaatccatcttttataatcattctgaaccctt 24744977  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  24744976 acccc-ctttcatccacaaatcaccat 24744951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 335 - 460
Target Start/End: Complemental strand, 3874656 - 3874532
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| |||||||||||||||||  ||| |||||| |||||||||||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  3874656 agttacatccaaatttatttaaaattgtactataataccaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 3874557  T
Q  435 acccctttttcacccacaaaccacca 460  Q
    |||||  ||||| ||||||| |||||    
T  3874556 acccc-ctttcatccacaaatcacca 3874532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 3932075 - 3931949
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa--tcattctttcattatcattctgaaccc 432  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||  ||| ||||| || ||||||||||||||    
T  3932075 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacctca-tcttttatgatcattctgaaccc 3931977  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | ||||| |||| | ||||||| ||||||    
T  3931976 ttaccccctttt-atccacaaatcaccat 3931949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 304 - 442
Target Start/End: Complemental strand, 11382037 - 11381898
Alignment:
Q  304 gactcttt-ctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaa 402  Q
    |||||||| |||||||||| | ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||  || |||  ||||||||||||    
T  11382037 gactctttgctagtctcaccctatataattctagttatatccaaatttatttaaaattttacaataatatcaaaattgctctgttcaagtaaatttctaa 11381938  T
Q  403 aaa-tcattctttcattatcattctgaaccctcaccccttt 442  Q
    ||| ||| ||||| || |||||||| ||  |||||||||||    
T  11381937 aaactca-tcttttatgatcattctaaattctcaccccttt 11381898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 36225219 - 36225124
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaac 430  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||    
T  36225219 agttacatccaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaac 36225124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 26488351 - 26488456
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  26488351 ctagttacacccaaatttatttcaaat-ttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 26488449  T
Q  433 tcacccc 439  Q
    | |||||    
T  26488450 ttacccc 26488456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 39677791 - 39677666
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  39677791 agttacacctaaatttatttaaaattttacaataataccaaaattaccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 39677692  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  39677691 acccc-ctttcatccacaaatcaccat 39677666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 429
Target Start/End: Complemental strand, 7327782 - 7327688
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaa 429  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| ||| ||||| || |||||||||||    
T  7327782 agttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaa 7327688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 439
Target Start/End: Complemental strand, 43957968 - 43957841
Alignment:
Q  312 ctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattc 411  Q
    |||||| ||||||| | ||  |||||||| |||||||||||||||||| ||||||||||| |||||||| ||| ||| |||||| || |||||| |  ||    
T  43957968 ctagtcacactccaaaaaaaactagttacccccaaatttatttaaaattttacaataataccaaaattgcccttttcatgtaaaattttaaaaacccatc 43957869  T
Q  412 tttcattatcattctgaaccctcacccc 439  Q
    ||| || ||||||||||||||| |||||    
T  43957868 ttttatgatcattctgaacccttacccc 43957841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 313 - 439
Target Start/End: Original strand, 44878022 - 44878148
Alignment:
Q  313 tagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttcta-aaaatcattc 411  Q
    ||||||||| ||||| |||| ||||||||  |||||||||||||||  |||||||||||  ||||||||||||||| |||||||||||| ||| ||| ||    
T  44878022 tagtctcaccccatacaattttagttacattcaaatttatttaaaaatttacaataatactaaaattgtcctcttcatgtaaatttctagaaactca-tc 44878120  T
Q  412 tttcattatcattctgaaccctcacccc 439  Q
    ||| || ||| ||||||||| |||||||    
T  44878121 ttttatgatcgttctgaaccttcacccc 44878148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 28573854 - 28573784
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||| ||||||    
T  28573854 agttacacccaaatttatttaaaattttacagtaatatcaaaattgccctcttcatgtaaatttttaaaaa 28573784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 36432572 - 36432475
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||| ||||||||||||||| |||||||||  ||||||||| ||||||| ||||||||| |||||| || ||||| || |||||||||||||||    
T  36432572 agttacacctaaatttatttaaaattttacaataacgtcaaaattgccctcttcatgtaaatttttaaaaacca-tcttttatgatcattctgaaccct 36432475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 438
Target Start/End: Complemental strand, 29933621 - 29933516
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || || |||||||||||    
T  29933621 ctagttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgattattctgaaccc 29933522  T
Q  433 tcaccc 438  Q
    | ||||    
T  29933521 ttaccc 29933516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 316 - 461
Target Start/End: Complemental strand, 7326544 - 7326399
Alignment:
Q  316 tctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa--tcattctt 413  Q
    |||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||   |||||| ||||| | |||||| |||||||||   |||| ||    
T  7326544 tctcaccccatataattttagttacacccaaatttatttaaaattttagaataatactgaaattgccctctccatgtaaaattctaaaaaccccatt-tt 7326446  T
Q  414 tcattatcattctgaaccctcacccctttttcacccacaaaccaccat 461  Q
    |||| |||||| |||||| | |  ||| ||||||||||||||||||||    
T  7326445 tcatgatcattttgaaccttta-acctctttcacccacaaaccaccat 7326399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 7554526 - 7554422
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||| | ||||| ||||||||| |||||| |  ||||| || |||||| ||||||||     
T  7554526 agttacacccaaatttatttcaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 7554427  T
Q  435 acccc 439  Q
    |||||    
T  7554426 acccc 7554422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 29923605 - 29923728
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 436  Q
    ||||||| ||||||||||||||| |||||||||||  ||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| |||||||| ||    
T  29923605 ttacacctaaatttatttaaaattttacaataatactaaaattgccctcttcatgtaaatttttaaaaacctatcttttatgatcattttgaacccttac 29923704  T
Q  437 ccctttttcacccacaaaccaccat 461  Q
    |||  ||||| ||||||| ||||||    
T  29923705 ccc-ctttcatccacaaatcaccat 29923728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 28867801 - 28867676
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||  ||||||||||||||| ||||||||||| ||||||||  |||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  28867801 agttacacttaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 28867703  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     |||||  ||||| ||||||| ||||||    
T  28867702 tacccc-ctttcatccacaaatcaccat 28867676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 33961887 - 33961789
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| | ||||| ||||||||| |||||| ||| |||||  | |||||||||||||||    
T  33961887 agttacacctaaatttatttaaaattttacaataatatcaaaattgccatcttcatgtaaatttttaaaaactca-tcttttctgatcattctgaaccct 33961789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 20492505 - 20492575
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||    
T  20492505 agttacatcgaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaa 20492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 439
Target Start/End: Original strand, 55541828 - 55541930
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 436  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||  |||||| |||||| || |||||| |  ||||| || ||||||||||||||| ||    
T  55541828 ttacactcaaatttatttaaaattttacaataataccaaaattgctctcttcatgtaaaattttaaaaacccatcttttatgatcattctgaacccttac 55541927  T
Q  437 ccc 439  Q
    |||    
T  55541928 ccc 55541930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 335 - 442
Target Start/End: Complemental strand, 55282558 - 55282451
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| ||||| ||| |||||| |  | ||| || |||||||||||||||     
T  55282558 agttacatctaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaattttttaaaaacccatattttatgatcattctgaaccctt 55282459  T
Q  435 accccttt 442  Q
    ||| ||||    
T  55282458 acctcttt 55282451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 430
Target Start/End: Complemental strand, 41764765 - 41764681
Alignment:
Q  345 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaac 430  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||    ||||| || ||||||||||||    
T  41764765 aaatttatttaaaattttacaataatatcaaaattgt-ctcttcatgtaaatttttaaaaacttatcttttatgatcattctgaac 41764681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 23115327 - 23115277
Alignment:
Q  309 tttctagtctcactccatataattctagttacacccaaatttatttaaaat 359  Q
    ||||||||||||  | |||||||||||||||||  ||||||||||||||||    
T  23115327 tttctagtctcatcctatataattctagttacattcaaatttatttaaaat 23115277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 7818532 - 7818464
Alignment:
Q  309 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaa 377  Q
    |||||| || ||| || |||| ||||||||||||||||||||| ||||||  ||| ||||||| |||||    
T  7818532 tttctattcgcaccccgtatatttctagttacacccaaatttacttaaaaatttataataataccaaaa 7818464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 5e-33; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 333 - 461
Target Start/End: Complemental strand, 2380418 - 2380291
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||| || ||||||||||||||    
T  2380418 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatcaatcttttatgatcattctgaaccc 2380319  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  2380318 ttacccc-ctttcatccacaaatcaccat 2380291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 335 - 477
Target Start/End: Complemental strand, 33965570 - 33965429
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  33965570 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct- 33965472  T
Q  435 acccctttttcacccacaaaccaccatgaatatgcaatcaata 477  Q
      |||| ||||| ||||||| |||||| ||| ||||| |||||    
T  33965471 tgccctctttcatccacaaatcaccataaatgtgcaaccaata 33965429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 26479977 - 26479852
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| || ||||| || |||||||||||||||     
T  26479977 agttacaccccaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaaccaatcttttatgatcattctgaaccctt 26479878  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  26479877 acccc-ctttcatccacaaatcaccat 26479852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 333 - 461
Target Start/End: Complemental strand, 19390698 - 19390571
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||| ||||||||||    
T  19390698 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcgttctgaaccc 19390599  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | ||||| |||||| ||||||| ||||||    
T  19390598 ttacccc-ttttcatccacaaatcaccat 19390571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 438 - 574
Target Start/End: Original strand, 18375744 - 18375884
Alignment:
Q  438 cctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgataagtactcgattcatac- 536  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||  ||||||||||||||||| ||| || |||  |||||| ||||||||     
T  18375744 cctttttcacccacaaaccaccaaggatatgtaatcaatacctactaaaatcgccaattgaatcaacatcttttctatcgatccgtactctattcataca 18375843  T
Q  537 ---gagtgaatttcgtaaatttcttcgagtttctatttatc 574  Q
        ||| |||||| ||||||||||||||||||||||||||    
T  18375844 agtaagtaaatttcataaatttcttcgagtttctatttatc 18375884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 12242742 - 12242848
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  12242742 ctagttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 12242841  T
Q  433 tcacccc 439  Q
    | |||||    
T  12242842 ttacccc 12242848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 21867108 - 21866983
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  21867108 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 21867009  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  21867008 acccc-ctttcatccacaaatcaccat 21866983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 25336526 - 25336651
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||  ||||| || || |||||||||| |     
T  25336526 agttacacccaaatttatttaaaattttacaataatatcaaaattgtccttttcatgtaaatttttaaaaatctatcttttatgattattctgaaccttt 25336625  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  25336626 acccc-ctttcatccacaaatcaccat 25336651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 39430382 - 39430259
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccctca 435  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||| ||| | ||| || ||||||||||||||| |    
T  39430382 ttacacccaaatttatttaaaattttacaataataccaaaattgttctcttcatgtaaatttctaaaaactca-tattttatgatcattctgaaccctta 39430284  T
Q  436 cccctttttcacccacaaaccaccat 461  Q
    |||| |||||| ||||||| ||||||    
T  39430283 cccc-ttttcatccacaaatcaccat 39430259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 4049461 - 4049564
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| || ||||| || || ||||||||||||     
T  4049461 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcttcttcatgtaaatttttaaaaacca-tcttttatgattattctgaaccctt 4049559  T
Q  435 acccc 439  Q
    |||||    
T  4049560 acccc 4049564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 41568831 - 41568706
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||| ||| ||||| || |||||| ||||||||    
T  41568831 agttacacctaaatttatttaaaattttacaataataccaaaattatcctcttcatgtaaatttctaaaaactca-tcttttatgatcattttgaaccct 41568733  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     ||||| |||||| ||||||| ||||||    
T  41568732 tacccc-ttttcatccacaaatcaccat 41568706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 8113689 - 8113787
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||| |||||| |  ||||| || |||||||||||||||    
T  8113689 agttacacccaaatttatttaaaattttactataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccct 8113787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 11124458 - 11124333
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||| ||||||||     
T  11124458 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattttgaaccctt 11124359  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  11124358 acccc-ctttcatccacaaatcaccat 11124333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 14287576 - 14287451
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||| |     
T  14287576 agttacacctaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccttt 14287477  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  14287476 acccc-ctttcatccacaaatcaccat 14287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 30787268 - 30787143
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  30787268 agttacacccaaatttatttaaaattttacaataataccaaaattgccctattcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 30787169  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  30787168 acccc-ctttcatccacaaatcaccat 30787143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 2357341 - 2357464
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctcac 436  Q
    |||||| |||||||||||||||| |||||||||||  ||||||||||||||| ||||||||| |||||| |  ||||| || ||||||||||||||| ||    
T  2357341 ttacactcaaatttatttaaaattttacaataatactaaaattgtcctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaacccttac 2357440  T
Q  437 ccctttttcacccacaaaccaccat 461  Q
    |||  ||||| ||||||| ||||||    
T  2357441 ccc-ctttcatccacaaatcaccat 2357464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 438 - 575
Target Start/End: Original strand, 18924990 - 18925130
Alignment:
Q  438 cctttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgataagtactcgattcatac- 536  Q
    ||||||||||||| ||||||| ||  |||||||||||||| |||| ||||||  ||||||||| ||||| | ||||||||||| |||||| ||||||||     
T  18924990 cctttttcacccagaaaccactatagatatgcaatcaatatctactaaaatcgccaattgaat-aacatattttccattgatatgtactctattcataca 18925088  T
Q  537 ---gagtgaatttcgtaaatttcttcgagtttctatttatcg 575  Q
        |||||||||| ||||||||||||||||| |||||||||    
T  18925089 aataagtgaatttcataaatttcttcgagtttttatttatcg 18925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 477
Target Start/End: Complemental strand, 2372217 - 2372076
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| | ||||||||||||| | |||||||||||  ||||||| ||||||| ||||||||| ||||||||  ||||| || |||||||||||||||     
T  2372217 agttacatctaaatttatttaaacttttacaataatactaaaattgccctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 2372118  T
Q  435 acccctttttcacccacaaaccaccatgaatatgcaatcaata 477  Q
    |||||  ||||| ||||||| ||||||  || |||||||||||    
T  2372117 acccc-ctttcatccacaaatcaccatagatgtgcaatcaata 2372076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 20115063 - 20115188
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||| | |||| |  ||||| || ||||||||||||| |     
T  20115063 agttacacccaaatttatttaaaattttacaataataccaaaattttcctcttcatgtaaattttttaaaacccatcttttatgatcattctgaaccttt 20115162  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    | |||| ||||| ||||||| ||||||    
T  20115163 a-ccctctttcatccacaaatcaccat 20115188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 31547399 - 31547301
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  31547399 agttagacccaaatttatttaaaattttacaataataccaaaattgtcatcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 31547301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 17977872 - 17977767
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  17977872 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 17977773  T
Q  434 cacccc 439  Q
     |||||    
T  17977772 tacccc 17977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 477
Target Start/End: Original strand, 11978764 - 11978905
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||  ||||||||| |||||| |  | ||| || |||||||||||| ||     
T  11978764 agttacacctaaatttatttaaaattttacaataataccaaaattgtcatctttctgtaaatttttaaaaacccattttttatgatcattctgaactctt 11978863  T
Q  435 acccctttttcacccacaaaccaccatgaatatgcaatcaata 477  Q
    | |||  ||||| ||||||| ||||||  || |||||||||||    
T  11978864 atccc-ctttcatccacaaatcaccatagatgtgcaatcaata 11978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 6034413 - 6034512
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||| |||||||  ||||||| ||||||| ||||||||| ||||||  |  ||||| || |||||||||||||||    
T  6034413 agttacacccaaatttatttaaaattttataataatactaaaattgccctcttcatgtaaatttttaaaaaccccatcttttatgatcattctgaaccct 6034512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 433
Target Start/End: Complemental strand, 1222746 - 1222650
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||| ||| |||||||||||  |||||||  |||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  1222746 ttacacccaaatttatttagaattttacaataatactaaaattgctctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 1222650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 43652906 - 43652968
Alignment:
Q  309 tttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataata 371  Q
    ||||||||| ||| ||||||| |||| |||| ||||||||||||||||||| |||||||||||    
T  43652906 tttctagtcacaccccatatatttctggttatacccaaatttatttaaaattttacaataata 43652968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 17435356 - 17435400
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaatt 379  Q
    ||||||||  ||||||||||||||| |||||||||||||||||||    
T  17435356 agttacacttaaatttatttaaaattttacaataatatcaaaatt 17435400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 932072 - 932125
Alignment:
Q  331 ttctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcct 384  Q
    ||||||||||||||| ||||| || |||| ||| ||||||| ||||||||||||    
T  932072 ttctagttacacccatatttactttaaattttataataataccaaaattgtcct 932125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 534
Target Start/End: Complemental strand, 9729511 - 9729418
Alignment:
Q  441 ttttcacccacaaaccaccatgaatatgcaatcaatacctacaaaaatcatcaattgaatcaacatctattccattgataagtactcgattcat 534  Q
    |||| ||||||||||||||||| || ||||||||||| |||| ||||| |   |||||||  |||||| || |||||||  |||||| ||||||    
T  9729511 tttttacccacaaaccaccatggatgtgcaatcaataactaccaaaattaaagattgaattcacatctttttcattgatccgtactctattcat 9729418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 383
Target Start/End: Original strand, 9141715 - 9141767
Alignment:
Q  331 ttctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcc 383  Q
    ||||||||||||||||||| | ||||||| || || ||||| |||||||||||    
T  9141715 ttctagttacacccaaattaacttaaaattttgcattaataccaaaattgtcc 9141767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 35006508 - 35006464
Alignment:
Q  336 gttacacccaaatttatttaaaatcttacaataatatcaaaattg 380  Q
    |||||||| ||||||| ||||||  ||||||||||||||||||||    
T  35006508 gttacacctaaatttacttaaaagtttacaataatatcaaaattg 35006464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 304 - 435
Target Start/End: Original strand, 11081 - 11212
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||| ||||||| |||| ||| |||||    
T  11081 gactcttgctagtctcaccccatataattctagttacatctaaatttatttaaaattttacaataataacaaaattgccctcttcatgtatattactaaa 11180  T
Q  404 aatcattctttcattatcattctgaaccctca 435  Q
    || |  ||||| || |||||||||||||||||    
T  11181 aacccatcttttatgatcattctgaaccctca 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 333 - 461
Target Start/End: Complemental strand, 40431407 - 40431280
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || ||||||||||||||    
T  40431407 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccc 40431308  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  40431307 ttacccc-ctttcatccacaaatcaccat 40431280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 335 - 457
Target Start/End: Complemental strand, 47020599 - 47020478
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||| || |||||||||||||||    
T  47020599 agttacacccaaatttatttaaaattttacaataatatcaaaattgtcctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaaccct 47020501  T
Q  434 cacccctttttcacccacaaacca 457  Q
     |||||  ||||| ||||||||||    
T  47020500 tacccc-ctttcatccacaaacca 47020478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 333 - 461
Target Start/End: Original strand, 42076334 - 42076461
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||| || |||||||||||||     
T  42076334 ctagttacacccaaatttatttaaatttttacaataataccaaaattgtcctcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccg 42076433  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | |||||  ||||| ||||||| ||||||    
T  42076434 ttacccc-atttcatccacaaatcaccat 42076461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 304 - 439
Target Start/End: Complemental strand, 3112236 - 3112101
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    |||||||  ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||  | ||||| |||||||| |||||    
T  3112236 gactcttgttagtctcatcccatataattctagttacacccaaatttatttaaaattttacaataataccaaaattaccatcttcatgtaaattactaaa 3112137  T
Q  404 aatcattctttcattatcattctgaaccctcacccc 439  Q
    || |  ||||| || |||||| |||||| |||||||    
T  3112136 aacctatcttttatgatcattatgaaccttcacccc 3112101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 3887672 - 3887797
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  3887672 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 3887771  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  3887772 acccc-ctttcatccacaaatcaccat 3887797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 5544434 - 5544309
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  5544434 agttacacccaaatttatttaaaattttacaataatattaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 5544335  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  5544334 acccc-ctttcatccacaaatcaccat 5544309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 9741356 - 9741231
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  9741356 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 9741257  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  9741256 acccc-ctttcatccacaaatcaccat 9741231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 18676886 - 18676761
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||||| ||||||||  ||||| || |||||||||||||||     
T  18676886 agttacacccaaatttatttaaaattttacaataataccaaaattgccatcttcatgtaaatttttaaaaatccatcttttatgatcattctgaaccctt 18676787  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  18676786 acccc-ctttcatccacaaatcaccat 18676761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 31588048 - 31587923
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  31588048 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 31587949  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  31587948 acccc-ctttcatccacaaatcaccat 31587923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 42697406 - 42697512
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||| |||||||   ||||| || ||||||||||||||    
T  42697406 ctagttacacccaaatttatttaaaattttacaataataccaaaattgtcctctttatgtaaatttttaaaaattcatcttttatgatcattctgaaccc 42697505  T
Q  433 tcacccc 439  Q
    | |||||    
T  42697506 ttacccc 42697512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 47455052 - 47455156
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  47455052 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 47455151  T
Q  435 acccc 439  Q
    |||||    
T  47455152 acccc 47455156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 30888522 - 30888418
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||| |  | ||| || |||||||||||||||     
T  30888522 agttacatccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacccatattttatgatcattctgaaccctt 30888423  T
Q  435 acccc 439  Q
    |||||    
T  30888422 acccc 30888418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 337 - 433
Target Start/End: Original strand, 31621940 - 31622036
Alignment:
Q  337 ttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||   ||||| || |||||||||||||||    
T  31621940 ttacatccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaattcatcttttatgatcattctgaaccct 31622036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 44508505 - 44508631
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaa-tttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||| ||| |||||| |  ||||| || |||||||||||||||    
T  44508505 agttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaattttttaaaaacccatcttttatgatcattctgaaccct 44508604  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     |||||  ||||| ||||||| ||||||    
T  44508605 tacccc-ctttcatccacaaatcaccat 44508631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 12726348 - 12726223
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||  ||||||| ||||||||| |||||| |  ||||| || |||||||||||||||     
T  12726348 agttacacccgaatttatttaaaattttacaataataccaaaattaccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccctt 12726249  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  12726248 acccc-ctttcatccacaaatcaccat 12726223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 44291054 - 44291158
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| |  ||||| || |||||| ||||| ||     
T  44291054 agttacacctaaatttatttaaaattttacaataatatcaaaattgtcatcttcatgtaaatttttaaaaacccatcttttatgatcattatgaactctt 44291153  T
Q  435 acccc 439  Q
    |||||    
T  44291154 acccc 44291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 9870532 - 9870437
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaac 430  Q
    ||||||| ||||||| ||| ||||  ||||||||||| |||||||||||||||| |||||||||||||||| |  ||||| |||||||||||||||    
T  9870532 agttacatccaaattaattaaaaagtttacaataataacaaaattgtcctcttcatgtaaatttctaaaaacccatcttttattatcattctgaac 9870437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 44061818 - 44061935
Alignment:
Q  343 ccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccctcacccctt 441  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||| |||||| ||| ||||| || ||||||||||||||| |||||      
T  44061818 ccaaatttatttaaaattttacaataatatcaaaattgctctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaacccttacccc-c 44061915  T
Q  442 tttcacccacaaaccaccat 461  Q
    ||||| ||||||| ||||||    
T  44061916 tttcatccacaaatcaccat 44061935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 461
Target Start/End: Original strand, 12848442 - 12848567
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||  ||||||| | ||||||| |||||| |  ||||| || |||||||||||||||     
T  12848442 agttacacctaaatttatttaaaattttacaataataccaaaattaccctcttcatataaatttttaaaaacccatcttttatgatcattctgaaccctt 12848541  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  12848542 acccc-ctttcatccacaaatcaccat 12848567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 41118907 - 41118782
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| | ||||||||| |||||||| | ||||| ||||||||| ||||||||  ||||| || || ||||||||||||     
T  41118907 agttacacctaaatttatttaaaatttaacaataataccaaaattgccttcttcatgtaaatttttaaaaatccatcttttatgataattctgaaccctt 41118808  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  41118807 acccc-ctttcatccacaaatcaccat 41118782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 38168207 - 38168128
Alignment:
Q  305 actctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcct 384  Q
    ||||||||||||||||| || |||||||||||||||| ||||| ||| ||||||| |||||| |||| ||||||||||||    
T  38168207 actctttctagtctcaccccgtataattctagttacatccaaaattacttaaaattttacaaaaataccaaaattgtcct 38168128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 40186836 - 40186711
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa-tcattctttcattatcattctgaaccct 433  Q
    ||||||| ||||||||||||||||| ||| ||||||| ||||| || ||||||| ||||||||| |||||| ||| ||||| || |||||||||||| ||    
T  40186836 agttacatccaaatttatttaaaattttataataataccaaaagtgccctcttcatgtaaatttttaaaaactca-tcttttatgatcattctgaactct 40186738  T
Q  434 cacccctttttcacccacaaaccaccat 461  Q
     |||||  ||||| ||||||| ||||||    
T  40186737 tacccc-ctttcatccacaaatcaccat 40186711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 40190188 - 40190129
Alignment:
Q  345 aaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa 405  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| | ||||||||||||||    
T  40190188 aaatttatttaaaat-ttacaataatatcaaaattgccctcttcatataaatttctaaaaa 40190129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 38743353 - 38743302
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctct 386  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| |||||    
T  38743353 agttacactcaaatttatttaaaattttacaataatatcaaaattgccctct 38743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 39494855 - 39494922
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataata 371  Q
    |||||||| |||||||||   |||||||| |||||||||| ||||||||||||||| |||||||||||    
T  39494855 gactctttttagtctcaccttatataattttagttacacctaaatttatttaaaattttacaataata 39494922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 439
Target Start/End: Complemental strand, 27419174 - 27419059
Alignment:
Q  324 catataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcat 423  Q
    ||||||| |||| ||||||| ||||||| ||||||| ||| ||||||| ||||||||  |||| |  ||| | ||||||||| |  | |||||| |||||    
T  27419174 catataactctaattacacctaaatttacttaaaattttataataataccaaaattgctctctccacgtagaattctaaaaacctctttttcataatcat 27419075  T
Q  424 tctgaaccctcacccc 439  Q
    |||||||| |||||||    
T  27419074 tctgaaccatcacccc 27419059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 37545041 - 37544993
Alignment:
Q  336 gttacacccaaatttatttaaaatcttacaataatatcaaaattgtcct 384  Q
    ||||||||||| |||| ||||||| | ||||||||||||||||||||||    
T  37545041 gttacacccaattttacttaaaatttaacaataatatcaaaattgtcct 37544993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 304 - 461
Target Start/End: Original strand, 5228 - 5383
Alignment:
Q  304 gactctttctagtctcactccatataattctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaa 403  Q
    ||||||| || ||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||| ||| ||| ||||||||||||||    
T  5228 gactcttgctggtctcac-ccatataattctagttacactcaaatttatttaaaattttacaattataccaaaattgccctgttcatgtaaatttctaaa 5326  T
Q  404 aatcattctttcattatcattctgaaccctcacccctttttcacccacaaaccaccat 461  Q
    || |  ||||| || |||||||||||  ||||||||  ||||| ||||||| ||||||    
T  5327 aacccatcttttatgatcattctgaattctcacccc-ctttcatccacaaatcaccat 5383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 333 - 439
Target Start/End: Complemental strand, 27939 - 27833
Alignment:
Q  333 ctagttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccc 432  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| |  ||||| || ||||||||||||||    
T  27939 ctagttacacccaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttttaaaaacccatcttttatgatcattctgaaccc 27840  T
Q  433 tcacccc 439  Q
    | |||||    
T  27839 ttacccc 27833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 335 - 433
Target Start/End: Complemental strand, 6570 - 6472
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccct 433  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||| |  | ||| || |||||||||||||||    
T  6570 agttacacccaaatttatttaaaattttacaataataccaaaattgtcctcttcatgtaaatttttaaaaacccatattttatgatcattctgaaccct 6472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 335 - 460
Target Start/End: Complemental strand, 5475 - 5351
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||| |||||||||||||||||  ||| |||||| |||||||||||||||| |||||||||||||||| |  ||||| || |||||||||||||||     
T  5475 agttacatccaaatttatttaaaattgtactataataccaaaattgtcctcttcatgtaaatttctaaaaacccatcttttatgatcattctgaaccctt 5376  T
Q  435 acccctttttcacccacaaaccacca 460  Q
    |||||  ||||| ||||||| |||||    
T  5375 acccc-ctttcatccacaaatcacca 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 1070 - 944
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaa--tcattctttcattatcattctgaaccc 432  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||  ||| ||||| || ||||||||||||||    
T  1070 agttacaccaaaatttatttaaaattttacaataataccaaaattgccctcttcatgtaaatttctaaaaacctca-tcttttatgatcattctgaaccc 972  T
Q  433 tcacccctttttcacccacaaaccaccat 461  Q
    | ||||| |||| | ||||||| ||||||    
T  971 ttaccccctttt-atccacaaatcaccat 944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 20466 - 20394
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatc 407  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  20466 agttacacccaaatttatttaaaattttacaataatatcaaaattgccctcttaatgtaaatttttaaaaatc 20394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 105831 - 105706
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    ||||||||| ||||||||||||||| | ||||||||| |||||||| | ||||| ||||||||| ||||||||  ||||| || || ||||||||||||     
T  105831 agttacacctaaatttatttaaaatttaacaataataccaaaattgccttcttcatgtaaatttttaaaaatccatcttttatgataattctgaaccctt 105732  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  105731 acccc-ctttcatccacaaatcaccat 105706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 461
Target Start/End: Complemental strand, 42804 - 42682
Alignment:
Q  335 agttacacccaaatttatttaaaatcttacaataatatcaaaattgtcctcttcttgtaaatttctaaaaatcattctttcattatcattctgaaccctc 434  Q
    |||||||| |||||||||||||||| ||||   |||| |||||||| ||||||| |||||||||  |||| ||  ||||| || |||||| ||||||||     
T  42804 agttacactcaaatttatttaaaattttac---aataccaaaattgccctcttcatgtaaattttaaaaactccatcttttatgatcattttgaaccctt 42708  T
Q  435 acccctttttcacccacaaaccaccat 461  Q
    |||||  ||||| ||||||| ||||||    
T  42707 acccc-atttcatccacaaatcaccat 42682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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