View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13706_low_14 (Length: 418)
Name: NF13706_low_14
Description: NF13706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13706_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 26 - 401
Target Start/End: Complemental strand, 27329049 - 27328675
Alignment:
| Q |
26 |
ggtttcatggtgtaccttaaaatgaacactactagttcccaattcttnnnnnnnntcaaactaatatgctcaagagctaactttaatttaatacatttat |
125 |
Q |
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| T |
27329049 |
ggtttcatggtgtaccttaaaatgaacactactagttcccaattctttaaaaaaatcaaactaatatgctcaagagctaactttaatataatacatttat |
27328950 |
T |
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| Q |
126 |
tttttcttagagcaacaaactccaaatgaatttgtggtgctattttagtggcatgcaaataatgtgatggtgtcatagtagaacaggtgacagctgatga |
225 |
Q |
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| T |
27328949 |
tttttcttagagcaaccaactccaaatgaatttgcggtgctattttagtggcatgcaaataatgtgatggtgtcatagtagaacaggtgacagctgatga |
27328850 |
T |
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| Q |
226 |
aacgtcacacaggccaggagatttatttgtttacgacctaattttgcatgtaagtatgttggatcggatcaagcttttatgtcacctgcgttttagcagg |
325 |
Q |
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| T |
27328849 |
aacgtcacacaggccaggagatttatttgtttacgacctaattttgcatgtaagtatgttggatcggatcaagcttttatgtcacctgcgttttagcagg |
27328750 |
T |
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| Q |
326 |
tggtccctcaatatcaaaccaccaaattcatgttcttttaannnnnnnggtacaacaccaaattcatgttctactt |
401 |
Q |
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| T |
27328749 |
tggtccctcaatatcaaaccaccaaattcatgttctttt-ttttttttggtacaacaccaaattcatgttctactt |
27328675 |
T |
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