View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13708_high_15 (Length: 216)
Name: NF13708_high_15
Description: NF13708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13708_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 8892971 - 8893147
Alignment:
| Q |
24 |
ttcgtgttcctacttagatacaaaatattaaacttgatcataatcgaatgatccaaattattcgatggcatattttccaattacatgaaccaaaattcat |
123 |
Q |
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| T |
8892971 |
ttcgtgttcctacttagatacaaaatattaaatttgatcataatcgaatgatccaaattattcgattgcatattttccaattacatgaaccaaaattcat |
8893070 |
T |
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| Q |
124 |
actctattttgcatgtttgaaattaagaatttgagttcaaaatgtttgcattcaatgcaacatttcatacggttcat |
200 |
Q |
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| T |
8893071 |
actctattttgcatgtttgaaattaagaatttgagttcaaaatgtttgcattcaatgcaacatttcatacggttcat |
8893147 |
T |
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