View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1370_high_63 (Length: 258)
Name: NF1370_high_63
Description: NF1370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1370_high_63 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 30 - 258
Target Start/End: Complemental strand, 27298220 - 27297991
Alignment:
| Q |
30 |
ggttcaactaccatagtttatggtaaaataatatgtcattaggagcataaataatttgttatctttctctcttattatgtttggaatgtagctctagtgt |
129 |
Q |
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| T |
27298220 |
ggttcaactaccatagtttatggtaaaataatatgtcattaggagcataaataatttgttatctttctctcttattatgtttggaatgtagctctagtgt |
27298121 |
T |
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| Q |
130 |
tggtaatatatgccgtcaaataaagttcacaaggacattgattgaaagctaagtagtgagaaatacaataactgaag-gnnnnnnnnnnntactataaca |
228 |
Q |
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| T |
27298120 |
tggtaatatatgccgtcaaataaagttcacaaggacattgattgaaagctaagtagtgagaaatacaataactgaagaagaaaaaaaaaatactagaaca |
27298021 |
T |
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| Q |
229 |
aaccaaagatgtgggacctacttgataaat |
258 |
Q |
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| T |
27298020 |
aaccaaagatgtgggacctacttgataaat |
27297991 |
T |
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