View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1370_low_65 (Length: 307)
Name: NF1370_low_65
Description: NF1370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1370_low_65 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 29 - 296
Target Start/End: Complemental strand, 44370488 - 44370221
Alignment:
| Q |
29 |
acgatgcatctgaatttggaaaagctctgaacatagattccaattgggctgcaagagattcctcgaaaagacgtgattttgacaagacattgttggaagt |
128 |
Q |
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| T |
44370488 |
acgatgcatctgaatttggaaaagctctgaacatagattccaattgggctgcaagagattcctcgaaaagacgtgattttgacaagacattgttggaagt |
44370389 |
T |
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| Q |
129 |
ggttgctgtgttggaagttgaagtttcttgtttttgtttgggttgtaaataagataattttcgggtttgtttaaatgcaacattactatcaaatgagaga |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44370388 |
ggttgctgtgttggaagttgaagtttcttgtttttgtttgggttgtaaataagataattttcgggtttgtttaaatgcaacattactatcaaatgagaga |
44370289 |
T |
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| Q |
229 |
acgtgtttgacttgatttgtagttgtatatattttgtggaaattagttcctagtttgtagttgttcat |
296 |
Q |
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| T |
44370288 |
acgtgtttgacttgatttgtagttgtatatattttgtggaaattagttcccagtttgtagttgttcat |
44370221 |
T |
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