View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1371-INSERTION-2 (Length: 374)
Name: NF1371-INSERTION-2
Description: NF1371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1371-INSERTION-2 |
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Alignment Details
Target: chr5 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 8 - 373
Target Start/End: Original strand, 4946617 - 4946982
Alignment:
| Q |
8 |
aaatcgaatcgaatttttaggaaagaaactgaagatgatgcaaattatgtcccctatctatgtgcctgaacttgtaagcatactactgtcaaagatcacc |
107 |
Q |
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| T |
4946617 |
aaatcgaatcgaatttttaggaaagaaactgaagatgatgcaaattatgtcccctatctatgtgcctgaacttgtaagcatactactgtcaaagatcgcc |
4946716 |
T |
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| Q |
108 |
tatcttaaaattcttaaactcttaagtaatcataactatagctgaacttgaaatattaaagtgattcatcttagaatcctagttctcgaataatttttgg |
207 |
Q |
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| T |
4946717 |
tatcttaaaattcttaaactcttaagtaatcataactatagctgaacttgaaatattaaagtgattcatcttagaatcctagctctcgaataatttttgg |
4946816 |
T |
|
| Q |
208 |
ccaaacattattttctggtcgaactttggattatgatgtttactccgataaaatgaatttgcatatgtatagaagaagaaagcttactctttaactaatt |
307 |
Q |
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| T |
4946817 |
ccaaacattattttctggtcgaactttggattatgatgtttactcggataaaatgaatttgcatatgtatagaagaagaaagcttactctttaaataatt |
4946916 |
T |
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| Q |
308 |
ttgaacagggaatggaggatctcaatttctttaaccaatacacgatggattctcttgcatctccaa |
373 |
Q |
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| T |
4946917 |
ttgaacagggaatggaggatctcaatttctttaaccaatacacgatggattctcttgcatctccaa |
4946982 |
T |
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