View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13711_low_15 (Length: 380)

Name: NF13711_low_15
Description: NF13711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13711_low_15
NF13711_low_15
[»] chr3 (25 HSPs)
chr3 (1-116)||(17797429-17797544)
chr3 (1-116)||(19105869-19105984)
chr3 (128-229)||(17796265-17796366)
chr3 (128-229)||(17796374-17796475)
chr3 (128-229)||(19104705-19104806)
chr3 (128-229)||(19104814-19104915)
chr3 (128-229)||(17796483-17796584)
chr3 (128-229)||(19104923-19105024)
chr3 (128-228)||(28745768-28745868)
chr3 (128-227)||(29067283-29067382)
chr3 (131-228)||(24620234-24620334)
chr3 (131-227)||(27676355-27676451)
chr3 (131-226)||(20756039-20756134)
chr3 (132-211)||(22494816-22494895)
chr3 (131-225)||(28135723-28135817)
chr3 (134-227)||(15806543-15806635)
chr3 (128-221)||(17064326-17064419)
chr3 (132-217)||(21963438-21963523)
chr3 (132-217)||(21985874-21985959)
chr3 (163-225)||(3449357-3449419)
chr3 (133-227)||(8156167-8156261)
chr3 (132-226)||(24649724-24649818)
chr3 (163-229)||(25870442-25870508)
chr3 (134-226)||(13005927-13006019)
chr3 (178-222)||(42696870-42696914)
[»] chr5 (16 HSPs)
chr5 (201-315)||(25812725-25812841)
chr5 (131-226)||(43234868-43234963)
chr5 (132-227)||(19578941-19579036)
chr5 (128-226)||(38158285-38158383)
chr5 (128-225)||(23172463-23172560)
chr5 (131-231)||(18051564-18051664)
chr5 (128-225)||(18843716-18843813)
chr5 (173-229)||(24647936-24647992)
chr5 (153-224)||(19042445-19042516)
chr5 (131-218)||(27340220-27340307)
chr5 (163-224)||(20320926-20320987)
chr5 (131-226)||(20923718-20923813)
chr5 (269-313)||(25764810-25764854)
chr5 (153-227)||(21059211-21059285)
chr5 (163-227)||(22645785-22645849)
chr5 (164-231)||(13350127-13350194)
[»] chr4 (18 HSPs)
chr4 (201-315)||(12404788-12404904)
chr4 (133-230)||(24719513-24719610)
chr4 (134-227)||(13023566-13023660)
chr4 (132-225)||(7044728-7044821)
chr4 (133-226)||(8011252-8011345)
chr4 (132-225)||(17466080-17466173)
chr4 (128-224)||(5375666-5375762)
chr4 (131-227)||(18459742-18459838)
chr4 (131-227)||(5361997-5362093)
chr4 (132-226)||(4156763-4156857)
chr4 (146-228)||(6347113-6347195)
chr4 (128-226)||(9770112-9770210)
chr4 (142-226)||(9149780-9149864)
chr4 (148-228)||(13551673-13551753)
chr4 (128-228)||(10142897-10142997)
chr4 (163-227)||(36120823-36120887)
chr4 (131-227)||(8889227-8889323)
chr4 (163-226)||(46664423-46664486)
[»] chr8 (18 HSPs)
chr8 (131-226)||(17646993-17647088)
chr8 (131-222)||(3094287-3094378)
chr8 (131-230)||(11879596-11879695)
chr8 (131-230)||(11897012-11897111)
chr8 (132-227)||(27836499-27836594)
chr8 (141-224)||(19704499-19704583)
chr8 (128-227)||(5922048-5922147)
chr8 (131-229)||(15294667-15294765)
chr8 (131-229)||(15475036-15475134)
chr8 (149-227)||(17788358-17788436)
chr8 (131-227)||(15761473-15761569)
chr8 (131-206)||(29384350-29384425)
chr8 (131-188)||(8582008-8582065)
chr8 (128-208)||(24056599-24056679)
chr8 (132-222)||(6292377-6292467)
chr8 (140-226)||(45403029-45403115)
chr8 (163-227)||(477113-477177)
chr8 (131-187)||(6810861-6810917)
[»] chr2 (21 HSPs)
chr2 (131-231)||(31238011-31238111)
chr2 (132-226)||(16766710-16766804)
chr2 (131-228)||(36429846-36429943)
chr2 (131-227)||(5395682-5395778)
chr2 (135-230)||(1404779-1404874)
chr2 (131-225)||(35565988-35566082)
chr2 (131-188)||(31023261-31023318)
chr2 (131-227)||(1690796-1690892)
chr2 (131-227)||(8428141-8428237)
chr2 (128-227)||(15588881-15588979)
chr2 (148-225)||(15516610-15516687)
chr2 (163-224)||(31578007-31578068)
chr2 (131-230)||(17995051-17995150)
chr2 (141-198)||(34841584-34841641)
chr2 (128-228)||(30432417-30432517)
chr2 (139-226)||(19491855-19491944)
chr2 (166-227)||(15627654-15627715)
chr2 (174-230)||(19245149-19245205)
chr2 (131-227)||(20063713-20063809)
chr2 (131-227)||(23863355-23863451)
chr2 (132-224)||(25539261-25539353)
[»] chr1 (23 HSPs)
chr1 (131-226)||(23528656-23528751)
chr1 (128-227)||(25146799-25146898)
chr1 (163-228)||(9955101-9955166)
chr1 (128-227)||(18304841-18304941)
chr1 (128-227)||(9352094-9352193)
chr1 (134-227)||(24117006-24117099)
chr1 (130-230)||(21846301-21846401)
chr1 (131-228)||(41032704-41032801)
chr1 (131-227)||(13100190-13100286)
chr1 (131-226)||(13276300-13276395)
chr1 (140-223)||(27917495-27917578)
chr1 (128-229)||(9327246-9327347)
chr1 (153-226)||(12800637-12800710)
chr1 (131-228)||(18337556-18337652)
chr1 (132-224)||(12513283-12513375)
chr1 (132-224)||(19009981-19010073)
chr1 (141-225)||(42180109-42180193)
chr1 (131-226)||(14074404-14074499)
chr1 (128-226)||(9128871-9128969)
chr1 (153-226)||(30619075-30619148)
chr1 (163-227)||(34478836-34478900)
chr1 (145-227)||(18891736-18891818)
chr1 (148-229)||(39845630-39845711)
[»] chr6 (22 HSPs)
chr6 (131-227)||(30912446-30912542)
chr6 (128-226)||(15528141-15528239)
chr6 (132-226)||(26053331-26053425)
chr6 (132-226)||(26073384-26073478)
chr6 (128-228)||(6943491-6943591)
chr6 (132-229)||(17543775-17543872)
chr6 (167-227)||(7223518-7223578)
chr6 (128-227)||(27233308-27233407)
chr6 (153-227)||(5422804-5422878)
chr6 (136-226)||(7918420-7918510)
chr6 (134-187)||(18490998-18491051)
chr6 (134-227)||(18491074-18491167)
chr6 (163-226)||(7359849-7359911)
chr6 (139-188)||(4841961-4842010)
chr6 (178-230)||(17103198-17103250)
chr6 (132-223)||(2912283-2912373)
chr6 (131-226)||(17250057-17250152)
chr6 (141-227)||(10958231-10958317)
chr6 (131-208)||(23897829-23897906)
chr6 (141-225)||(4597195-4597278)
chr6 (163-219)||(8545031-8545087)
chr6 (131-227)||(11327605-11327701)
[»] chr7 (27 HSPs)
chr7 (131-226)||(11326386-11326481)
chr7 (132-227)||(26281344-26281439)
chr7 (131-226)||(22687698-22687793)
chr7 (131-226)||(24990105-24990200)
chr7 (131-229)||(24725511-24725609)
chr7 (130-219)||(8571250-8571339)
chr7 (132-226)||(5715290-5715383)
chr7 (133-227)||(27221417-27221511)
chr7 (131-224)||(8346567-8346660)
chr7 (148-228)||(9685295-9685375)
chr7 (131-227)||(14055250-14055346)
chr7 (131-227)||(14365278-14365374)
chr7 (131-226)||(4247356-4247451)
chr7 (131-230)||(8330079-8330178)
chr7 (134-228)||(21157811-21157905)
chr7 (131-226)||(44944879-44944978)
chr7 (140-227)||(26565671-26565758)
chr7 (131-225)||(5058530-5058624)
chr7 (165-226)||(30294175-30294236)
chr7 (132-188)||(8343835-8343891)
chr7 (134-226)||(21846463-21846554)
chr7 (131-227)||(39182259-39182354)
chr7 (131-217)||(11324988-11325074)
chr7 (128-230)||(17811347-17811445)
chr7 (131-227)||(7730377-7730472)
chr7 (134-230)||(8629995-8630091)
chr7 (163-227)||(26617542-26617606)
[»] scaffold0036 (1 HSPs)
scaffold0036 (131-227)||(37200-37296)
[»] scaffold0048 (1 HSPs)
scaffold0048 (134-227)||(48825-48918)
[»] scaffold0186 (1 HSPs)
scaffold0186 (163-231)||(8438-8506)
[»] scaffold0603 (1 HSPs)
scaffold0603 (131-230)||(9054-9153)
[»] scaffold1892 (1 HSPs)
scaffold1892 (131-188)||(886-943)
[»] scaffold0510 (1 HSPs)
scaffold0510 (131-208)||(135-212)
[»] scaffold0417 (1 HSPs)
scaffold0417 (131-227)||(7489-7585)


Alignment Details
Target: chr3 (Bit Score: 104; Significance: 9e-52; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17797544 - 17797429
Alignment:
Q  1 ctctatgcaagaactaacatatttgcaacatcaattcaagtaatctaaagacctgatttcgtgtttttctttatcaggattgtcacaatacacattttat 100  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17797544 ctctatgcaagaactaacatagttgcaacatcaatttaagtaatctaaagacctgattttgtgtttttctttatcaggattgtcacaatacacattttat 17797445  T
Q  101 aacaattcgatcattg 116  Q
    ||||||||||||||||    
T  17797444 aacaattcgatcattg 17797429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19105984 - 19105869
Alignment:
Q  1 ctctatgcaagaactaacatatttgcaacatcaattcaagtaatctaaagacctgatttcgtgtttttctttatcaggattgtcacaatacacattttat 100  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19105984 ctctatgcaagaactaacatagttgcaacatcaatttaagtaatctaaagacctgattttgtgtttttctttatcaggattgtcacaatacacattttat 19105885  T
Q  101 aacaattcgatcattg 116  Q
    ||||||||||||||||    
T  19105884 aacaattcgatcattg 19105869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 17796366 - 17796265
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||    
T  17796366 tgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatg 17796267  T
Q  228 at 229  Q
    ||    
T  17796266 at 17796265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 17796475 - 17796374
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||    
T  17796475 tgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatg 17796376  T
Q  228 at 229  Q
    ||    
T  17796375 at 17796374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 19104806 - 19104705
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||||    
T  19104806 tgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatg 19104707  T
Q  228 at 229  Q
    ||    
T  19104706 at 19104705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 19104915 - 19104814
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||    
T  19104915 tgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatg 19104816  T
Q  228 at 229  Q
    ||    
T  19104815 at 19104814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 17796584 - 17796483
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||| || |||||||||||||| | | ||||||||||||||||    
T  17796584 tgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatg 17796485  T
Q  228 at 229  Q
    ||    
T  17796484 at 17796483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 19105024 - 19104923
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||| || |||||||||||||| | | ||||||||||||||||    
T  19105024 tgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatg 19104925  T
Q  228 at 229  Q
    ||    
T  19104924 at 19104923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 28745868 - 28745768
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||  |||||| ||||||||||||||  ||||||||||| |||||||||||||| ||||||||| ||||||| | || |||||||||||||||    
T  28745868 tgtctattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaatg 28745769  T
Q  228 a 228  Q
    |    
T  28745768 a 28745768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 29067382 - 29067283
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||| ||||||| ||||| ||||||||  ||||||||||| |||||||||||||| | |||||||  |||||||| || |||||||||||||||    
T  29067382 tgtctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaatg 29067283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 24620234 - 24620334
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcg---caaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||  |||||| || |||||||||||  ||||||||||| |||||||   ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  24620234 ctattttgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaatg 24620333  T
Q  228 a 228  Q
    |    
T  24620334 a 24620334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 27676451 - 27676355
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| ||||||||||||| ||||||||  | |||||||||||||||||||||||| |  |||||| |||||||||  | |||||||||||||||    
T  27676451 ctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgacaacaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 20756134 - 20756039
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||| |||||| ||||| ||||||||  ||||||||||| ||| |||||||||| | |||||||| |||||||| || ||||||||||||||    
T  20756134 ctattttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 22494816 - 22494895
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttgg 211  Q
    |||||||||||||| |||||||||| |||  ||||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  22494816 tattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagattttaggatttaagttgg 22494895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 28135817 - 28135723
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    |||||| || ||| ||||||| ||||||||   |||| |||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||||    
T  28135817 ctatttgagaattttgctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 15806543 - 15806635
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||| ||||||||||||| ||||||||  |||||||||||||||||||||||||  |  ||| || ||||||||| || |||||||||||||||    
T  15806543 ttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtcgg-attttgacaacaatg 15806635  T

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Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 17064419 - 17064326
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgaca 221  Q
    |||||||||||| ||||| ||||||||| ||||  ||||||||||| | | |||||||||| | ||||||| ||||||||| || |||||||||    
T  17064419 tgtctattttagaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

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Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 21963523 - 21963438
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaatttt 217  Q
    |||||||||||| | ||||| ||||||||  || |||||||| ||||||| |||||||| ||||||| ||||||||| || |||||    
T  21963523 tattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21963438  T

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Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 21985959 - 21985874
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaatttt 217  Q
    |||||||||||| | ||||| ||||||||  || |||||||| ||||||| |||||||| ||||||| ||||||||| || |||||    
T  21985959 tattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 3449357 - 3449419
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    |||||||| || |||||||||||||| | ||||||| ||||||||| || |||||||||||||    
T  3449357 ttgaaggtaaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

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Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 8156167 - 8156261
Alignment:
Q  133 attttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||| ||||| | ||||| ||||||||  ||||||||||| ||| ||| |||||  | |||||||  ||||||||||| |||||||||||||||    
T  8156167 attttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaatg 8156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 24649724 - 24649818
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||| | ||||| ||||| ||||||||  |||||||||||  |||||  |||||| || |||||| ||||||||| || ||||||||||||||    
T  24649724 tattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatcctagattttacgatttaagtcgggattttgacaacaat 24649818  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 25870442 - 25870508
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgat 229  Q
    |||||| |||| |||||| |||||||||  |||||| ||||||||| |  |||||||||||||||||    
T  25870442 ttgaagatgaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaatgat 25870508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 13006019 - 13005927
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||| ||||| ||||||| ||||||  | || ||||||||||||||||||||||  | ||||||   |||||||| |  ||||||||||||||    
T  13006019 ttttgggattttgctatggatttgaaatgttaaaggtgaataaagtcgcaaaattatgaattttgaaatttaagtcgagattttgacaacaat 13005927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 42696914 - 42696870
Alignment:
Q  178 gtcgcaaaatcttaaattttatgatttaagttggaattttgacaa 222  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||    
T  42696914 gtcgcaaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

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Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 315
Target Start/End: Complemental strand, 25812841 - 25812725
Alignment:
Q  201 atttaagttggaattttgacaacaatgattgatacaatgttgaactattgaataataagttattttgt--agaagaagataaaagaggaactgaatctta 298  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  25812841 atttaagtcgggattttgacaacaatgatcgatacaatgttgaactattgaattataagttattttgtagagaagaagataaaagaggaactgaatctta 25812742  T
Q  299 ttccaatctattatcaa 315  Q
    |||||||||||||||||    
T  25812741 ttccaatctattatcaa 25812725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 43234963 - 43234868
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||||||| ||||| |||| |||  ||||||||||| |||||||||||||| | ||||||| |||||||||||| ||||||||||||||    
T  43234963 ctattttaggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 19579036 - 19578941
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||| ||||||| ||||| |||| |||  ||||||||||| ||| |||||||||| |  |||||||||||||||||||||||||||||||||||    
T  19579036 tattttgggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaatg 19578941  T

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Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 38158285 - 38158383
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||||| ||||||| || || ||||||||| ||||| || || |||||||||||||| || |||||| ||||||||| |||||||||||||||||    
T  38158285 tgtctattttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 23172463 - 23172560
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    |||||||||| ||||||| ||||| |||| |||  |||||| |||| |||||||||||||| ||||||||| ||||||||| || |||||||||||||    
T  23172463 tgtctattttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 18051564 - 18051664
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||||||| ||||| ||||  ||||||||  |||||| |||| |||||||||||||| || |||||| ||||||||| || ||||||||||||||||||    
T  18051564 ctattttagaattctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaatgatt 18051663  T
Q  231 g 231  Q
    |    
T  18051664 g 18051664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 18843813 - 18843716
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    |||||||||| ||||||| | ||| ||||||||  ||||||||||| |||||||||||||| | |||| || ||||||||| |||||||| |||||||    
T  18843813 tgtctattttgggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 24647992 - 24647936
Alignment:
Q  173 ataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgat 229  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  24647992 ataaagtcgcaatatcttaaattttaagatttaagtcggaattttgacaacaatgat 24647936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 19042445 - 19042516
Alignment:
Q  153 atttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    ||||||||  ||||||||||| |||||| |||||||||||||||||  ||||||||||| ||||||||||||    
T  19042445 atttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 27340220 - 27340307
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttg 218  Q
    |||||||| |||||| ||||  ||||||||  |||||| |||| |||||||||||||| ||||||||||||||||||| || ||||||    
T  27340220 ctattttaagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 20320987 - 20320926
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    ||||||||||| ||||| |||||||||||||||||| |||||| ||||| ||||||||||||    
T  20320987 ttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 20923813 - 20923718
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||||||| ||||| ||||  ||  ||||||||||| |||||||||||||  |  |||||| ||||||||| || ||||||||||||||    
T  20923813 ctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttaggatttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 313
Target Start/End: Original strand, 25764810 - 25764854
Alignment:
Q  269 agaagaagataaaagaggaactgaatcttattccaatctattatc 313  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  25764810 agaagaagataaaagatgaactgaatcttattcccatctattatc 25764854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 21059211 - 21059285
Alignment:
Q  153 atttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||  ||||| ||||| |||||||||||||| || |||||| ||||||| | || |||||||||||||||    
T  21059211 atttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaatg 21059285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 22645785 - 22645849
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||| |||||||||||||  |  |||||| ||||||||| || |||||||||||||||    
T  22645785 ttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaatg 22645849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 13350127 - 13350194
Alignment:
Q  164 tgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgattg 231  Q
    ||||||||| |||||| ||||||||||  |||||  |||||||||||  ||||||||||||| |||||    
T  13350127 tgaaggtgagtaaagttgcaaaatcttggattttgggatttaagttgtgattttgacaacaaagattg 13350194  T

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Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 315
Target Start/End: Complemental strand, 12404904 - 12404788
Alignment:
Q  201 atttaagttggaattttgacaacaatgattgatacaatgttgaactattgaataataagttattttgt--agaagaagataaaagaggaactgaatctta 298  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  12404904 atttaagtcgggattttgacaacaatgatcgatacaatgttgaactattgaattataagttattttgtagagaagaagataaaagaggaactgaatctta 12404805  T
Q  299 ttccaatctattatcaa 315  Q
    |||||||||||||||||    
T  12404804 ttccaatctattatcaa 12404788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 24719610 - 24719513
Alignment:
Q  133 attttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||  | |||||| |  ||||||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatgatt 24719513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 13023660 - 13023566
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaa-ttttatgatttaagttggaattttgacaacaatg 227  Q
    |||| ||||||| ||||| ||||||||  ||||||||||| |||||||||||||| |||| ||||| |||||||||||| |||||||||||||||    
T  13023660 ttttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 7044821 - 7044728
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    |||||| ||||||||||||| ||||||||  ||||||||||||||||| |||||||| |  |||||| ||||||||| || |||||||||||||    
T  7044821 tattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgacaacaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 8011252 - 8011345
Alignment:
Q  133 attttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||| ||||||| ||||| ||||||||  ||||||||||| |||||||||||||| | ||||||| ||||| |||||| ||||||||||||||    
T  8011252 attttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttgagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 17466173 - 17466080
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    ||||||||||||||  |||| ||||||||  || ||| |||| ||| |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  17466173 tattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 5375762 - 5375666
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    |||||||||||  |||||  ||||||||| |||  ||||||||||| ||||||||||||||||||||||||  ||||| ||||| ||||||||||||    
T  5375762 tgtctattttaaaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 18459742 - 18459838
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||||||||||| ||||||||  ||||| ||||||| ||||||||||||||  |||||| ||||| ||| || ||||| |||||||||    
T  18459742 ctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttacaacaatg 18459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 5361997 - 5362093
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| | ||||| ||||| ||||||||  |||||| |||| |||||||||||||| | ||||||| ||||||||| || |||||||||||||||    
T  5361997 ctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatg 5362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 4156857 - 4156763
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||||||||| |||   ||||||||  || |||||||||||||||  |||||| ||||||||| ||||||||| || ||||||||||||||    
T  4156857 tattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaacaat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 6347113 - 6347195
Alignment:
Q  146 gctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatga 228  Q
    |||||| ||||||||  |||||||| |||||||| |||||||| |  |||||| ||||||||||||||||||||||| |||||    
T  6347113 gctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaataatga 6347195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 9770210 - 9770112
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||||||||||||| ||||| ||||||||  ||||||||||| |||||| ||||||| || ||||||  |||||||| |  ||||| ||||||||    
T  9770210 tgtctattttaggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 9149780 - 9149864
Alignment:
Q  142 ttctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||| ||| ||||||| | |||||||||  |||||||||||||||| ||||||||| ||||||||| || |||||||| |||||    
T  9149780 ttctgatataaatttgattctttgaaggtagataaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 13551673 - 13551753
Alignment:
Q  148 tatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatga 228  Q
    |||| ||||||||  ||||||||||| |||||||||||||| ||||||||| ||| ||||| |  ||||||||||||||||    
T  13551673 tatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatga 13551753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 10142997 - 10142897
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||| | ||| | ||||| | ||||||  ||||||||| | ||||||||||||| ||||||||||  |||||||| || ||||| |||||||||    
T  10142997 tgtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaatg 10142898  T
Q  228 a 228  Q
    |    
T  10142897 a 10142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 36120887 - 36120823
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||| ||| |||||||||| |||||||||  |||||| | ||||||||||||||||||    
T  36120887 ttgaaggtgaagaaaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 8889323 - 8889227
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| |||||||  |||||||||||||  |||| |||||| ||| || ||||||| |  |||||| ||||||||| || ||||||||| |||||    
T  8889323 ctattttgggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaatg 8889227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 46664423 - 46664486
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||| |||| |||||||||||||  | ||||||| ||||||||||| |||||||||| ||||    
T  46664423 ttgaagatgaacaaagtcgcaaaattctgaattttaagatttaagttgaaattttgacagcaat 46664486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 17647088 - 17646993
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||| ||||||| ||||||||||||||  ||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  17647088 ctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 3094287 - 3094378
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaa 222  Q
    ||||||||||||||| ||||| ||||||||  ||||||||||| ||||| |||||||| | ||||||| ||||||||| | |||||||||||    
T  3094287 ctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 11879695 - 11879596
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||||||||||||| ||||  ||||||||  ||||| ||||| ||||| |||||||| | ||||||| |||||||||  ||||||||||||||||||||    
T  11879695 ctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatgatt 11879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 11897111 - 11897012
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||||||||||||| ||||  ||||||||  ||||| ||||| ||||| |||||||| | ||||||| |||||||||  ||||||||||||||||||||    
T  11897111 ctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatgatt 11897012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 27836499 - 27836594
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||| ||||| ||||| |||| |||| |||||||||||||||  ||||||||| | ||||||| ||| |||||| |||||||||||||||||    
T  27836499 tattttagaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttaggatctaagtttgaattttgacaacaatg 27836594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 19704499 - 19704583
Alignment:
Q  141 attctgctatgaatttgagtttttgaaggtgaataaagtcgc-aaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    ||||| ||||| ||||||||  ||||||||||| |||||||| |||| ||| ||||||| |||||||||||| ||||||||||||    
T  19704499 attctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 5922147 - 5922048
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||| ||||||| ||||| || | |||  ||||||||||| |||||| ||||||| |  |||||| ||||||||| || |||||||||||||||    
T  5922147 tgtctattttgggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 5922048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 15294765 - 15294667
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgat 229  Q
    ||||||| | ||||| ||||  ||||||||  ||||||||||| |||||||||||||| | ||||||| ||||||||| || ||||| |||||| ||||    
T  15294765 ctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaacattgat 15294667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 15475134 - 15475036
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgat 229  Q
    ||||||| | ||||| ||||  ||||||||  ||||||||||| |||||||||||||| | ||||||| ||||||||| || ||||| |||||| ||||    
T  15475134 ctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaacattgat 15475036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 17788358 - 17788436
Alignment:
Q  149 atgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||| | ||||||||||| ||||||| ||||||| || ||||||  ||||||||||  |||||||||||||||    
T  17788358 atgaatttgaatatttgaaggtgagtaaagtctcaaaatcctagattttaaaatttaagttgcgattttgacaacaatg 17788436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 15761473 - 15761569
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| ||||| ||||||||||||||||  |||||||| |||||| || ||||||| |  | |||| ||||||||| |  |||||||||||||||    
T  15761473 ctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaacaatg 15761569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 29384350 - 29384425
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaa 206  Q
    ||||||| ||||| | ||||| ||||||||  ||||||||||| ||||||||||||||| | |||||| |||||||    
T  29384350 ctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaagattttaggatttaa 29384425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 8582065 - 8582008
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatc 188  Q
    |||||||||||||||| |||||||||||||  || |||||||| |||| |||||||||    
T  8582065 ctattttaggattctgttatgaatttgagtcattaaaggtgaacaaagacgcaaaatc 8582008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 24056599 - 24056679
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagt 208  Q
    |||||||||| |||||  |||||| ||||||||  || || |||||||||||||||||||| |  |||||| |||||||||    
T  24056599 tgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagt 24056679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 6292377 - 6292467
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaa 222  Q
    |||||||| ||| | |||||  |||||||  || ||| |||| |||||| ||||||||||||||||| ||||||||| || ||||| ||||    
T  6292377 tattttagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 45403115 - 45403029
Alignment:
Q  140 gattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||| ||||| |||| |||  |||||||| || ||||||||||||||||  ||||||  |||||||| |  ||||||||||||||    
T  45403115 gattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaat 45403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 477113 - 477177
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||| |||||| ||||||| |  |||||| |||||||||  | |||||||||||||||    
T  477113 ttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 6810917 - 6810861
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaat 187  Q
    ||||||||  ||||| ||||| ||||||||  ||||||||||| |||||||||||||    
T  6810917 ctattttaaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 31238011 - 31238111
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    |||||||| |||||| ||||||||||||||  ||||||||||| ||||| |||||||| || |||||| ||||||||| || ||||||||||||||||||    
T  31238011 ctattttaagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaatgatt 31238110  T
Q  231 g 231  Q
    |    
T  31238111 g 31238111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 16766804 - 16766710
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||||||||||||||| |||||| |  ||||||||||||||| ||| |||||| ||||||||| |||||||||   |||||||||||||||    
T  16766804 tattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 36429943 - 36429846
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatga 228  Q
    |||||||  |||||| ||||||| ||||||  ||||||||||| |||||||||||||| || ||| || |||||||||||| ||||||||||||||||    
T  36429943 ctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaatga 36429846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 5395682 - 5395778
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||  |||||||||||| ||||||||  || ||| ||||||||||||||||||| || ||||||||||||| ||   ||||||||||||||||    
T  5395682 ctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaacaatg 5395778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 1404874 - 1404779
Alignment:
Q  135 tttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||||||||| | ||| |||| |||  ||||||||||| |||||| ||||||| |||||||||  |||||||| || ||||||||||||||||||    
T  1404874 tttaggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaatgatt 1404779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 35565988 - 35566082
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    ||||||| ||||||| | ||| ||||||||  |||||  |||| |||||||||||||| | |||||| ||||||||||||| |||||||||||||    
T  35565988 ctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 31023318 - 31023261
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatc 188  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||    
T  31023318 ctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatc 31023261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 1690796 - 1690892
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| ||||| | ||||| || |||||  | ||||||||| |||||| ||||||| ||||||||| ||||||||| ||| ||||||||||||||    
T  1690796 ctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttgacaacaatg 1690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 8428237 - 8428141
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||| |||||| ||||||||||||||  || ||||| | |||| ||||||||| |||||||||| |||| || |  |||||||||||||||||    
T  8428237 ctattttaagattctcctatgaatttgagtcattaaaggtaagtaaaatcgcaaaattttaaattttaagattgaattctgaattttgacaacaatg 8428141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 15588881 - 15588979
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||  |||||| ||||| ||||||||| ||||||||||| |||| ||||||||| | ||||||| || |||||| || ||||||||| |||||    
T  15588881 tgtctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaatg 15588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 15516610 - 15516687
Alignment:
Q  148 tatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    ||||||||||| || |||||||||||||||||||||||||  | ||| ||| |||||||||||  ||||| |||||||    
T  15516610 tatgaatttgaattgttgaaggtgaataaagtcgcaaaatgctgaatattaagatttaagttgcgattttaacaacaa 15516687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 31578068 - 31578007
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    ||||||||||| ||| ||||||||||||||||||||  |||||||| || ||||||||||||    
T  31578068 ttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 17995150 - 17995051
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||||| | ||| ||||| ||||||||||  |||| |||||||||| |||||||||  |  |||||| | ||||||| |||||||| ||||||||||||    
T  17995150 ctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaacaatgatt 17995051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 34841641 - 34841584
Alignment:
Q  141 attctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaatttta 198  Q
    ||||| ||||| ||||||||  ||||||||||||||||||||| |||| |||||||||    
T  34841641 attctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaatttta 34841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 30432517 - 30432417
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||  |||||| ||||| ||||||||  ||||||| ||| ||||||| |||||| || ||||||  |||||| |  | |||||||||||||||    
T  30432517 tgtctattttgagattctactatggatttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaatg 30432418  T
Q  228 a 228  Q
    |    
T  30432417 a 30432417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 19491944 - 19491855
Alignment:
Q  139 ggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttat--gatttaagttggaattttgacaacaat 226  Q
    ||||||||||||| ||||||||  || ||| |||| |||||||||||||| || |||||||  ||||||| | |  ||||||||||||||    
T  19491944 ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttataggatttaattcgagattttgacaacaat 19491855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 15627715 - 15627654
Alignment:
Q  166 aaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||  | ||||||| ||||||||| ||||||||| || |||||||||| ||||    
T  15627715 aaggtgaataaaaccacaaaatcataaattttaggatttaagtcgggattttgacaataatg 15627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 19245205 - 19245149
Alignment:
Q  174 taaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    |||||||| |||||| | |||||||  |||||||| || ||||||||||||||||||    
T  19245205 taaagtcgtaaaatcctgaattttaaaatttaagtcgggattttgacaacaatgatt 19245149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 20063809 - 20063713
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| ||||||| ||||| |||| |||  |||||| |||| |||  ||||||| |||  |||||| | ||||||| || |||||||||||||||    
T  20063809 ctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 23863355 - 23863451
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||  |||||| ||||| |||| |||  ||||| ||||| |||||||||||||  |  ||||||  |||||||| || |||||||||||||||    
T  23863355 ctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattttagaatttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 25539261 - 25539353
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    |||||| ||||||| ||||| |||| |||  ||||||||||| ||| | ||||| |||| ||||||| ||||||| | || ||||| ||||||    
T  25539261 tattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttgaattttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 23528751 - 23528656
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||||||| ||||| ||||||||  |||||| |||| |||||||||||||| | ||||||| |||||||||||| ||||||||||||||    
T  23528751 ctattttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 25146799 - 25146898
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||| ||||||| ||||||||||||||  ||||||||||| |||||||||||||  | ||||||| |||||||||  | |||||||||||||||    
T  25146799 tgtctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 9955101 - 9955166
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatga 228  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  9955101 ttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatga 9955166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 18304841 - 18304941
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtt-tttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||  |||||| ||||||||||||||  |||||||||||| |||||||||||||  |  |||||| |||||||||||| ||||||||||||||    
T  18304841 tgtctattttgagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaat 18304940  T
Q  227 g 227  Q
    |    
T  18304941 g 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 9352094 - 9352193
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||| ||| ||||||||  |||||||| |||||||||||| |||||||||||| | |  |||||| ||||||||| || |||||||||||||||    
T  9352094 tgtctattttgggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaatg 9352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 24117099 - 24117006
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||| |||||||  ||| ||||||| |  ||||||||||||||||| | ||||||||||||||||  |||||| ||||||||||||||||||||    
T  24117099 ttttgggattctaatataaatttgaatcgttgaaggtgaataaagttgtaaaatcttaaattttagaatttaaattggaattttgacaacaatg 24117006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 21846301 - 21846401
Alignment:
Q  130 tctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgat 229  Q
    ||||||||  |||||| ||||| ||||||||  ||||||||||| |||||||||||||| |  |||||| ||||||| | || |||||||||||||||||    
T  21846301 tctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcgggattttgacaacaatgat 21846400  T
Q  230 t 230  Q
    |    
T  21846401 t 21846401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 41032704 - 41032801
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatga 228  Q
    ||||||||| ||||| ||||| ||||||||  ||||||||||| ||| |||||||||| | |||| || ||||||||| |  ||||||||||||||||    
T  41032704 ctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctgaattctacgatttaagtcgagattttgacaacaatga 41032801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 13100286 - 13100190
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||||| ||||| ||||||||  ||||| ||||| ||||||| |||||| |  ||||||  ||||||||||| |||||||||| ||||    
T  13100286 ctattttaggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaataatg 13100190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 13276300 - 13276395
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||||||| ||||| ||||  ||  |||||| |||| |||||||||||||| || |||||| ||||||| | || ||||||||||||||    
T  13276300 ctattttaggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 27917495 - 27917578
Alignment:
Q  140 gattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaac 223  Q
    |||||||||||||||||| ||| |||||||| |||||| |||||||||| || |||| |  |||||||| || |||||||||||    
T  27917495 gattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgacaac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 9327246 - 9327347
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||| ||||| | ||||  ||||||||  ||||||||| | |||||||||||| | ||||||||| |||||||||  | ||||| |||||||||    
T  9327246 tgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagtcaggattttaacaacaatg 9327345  T
Q  228 at 229  Q
    ||    
T  9327346 at 9327347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 12800637 - 12800710
Alignment:
Q  153 atttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||  ||||| ||||| ||||||| |||||| ||||||||| |||||||||||| ||||| ||||||||    
T  12800637 atttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 18337556 - 18337652
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatga 228  Q
    ||||||| || |||||||||| ||||||||  ||||||||||||||||| |||||||| |  |||||| | | ||||| || ||||||||||||||||    
T  18337556 ctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggatttta-ggtataagtcgggattttgacaacaatga 18337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 12513375 - 12513283
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    ||||||| |||| | ||||| ||||||||  |||||| |||| |||||||||||||| || ||| || ||||||||| || ||||||||||||    
T  12513375 tattttatgattttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 19009981 - 19010073
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    |||||||| ||| | ||||| |||| |||  ||||||||||| |||||||||||||| | ||||||| |||||||||  | ||||||||||||    
T  19009981 tattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 42180109 - 42180193
Alignment:
Q  141 attctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    ||||| ||||| |||||| |  ||||||| ||| |||||||||||||| | |||||||  ||||||||||| |||||||||||||    
T  42180109 attctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 14074404 - 14074499
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||| |||||| || || ||||||||  |||||  |||| |||||||||||||| || |||||| ||||||||  || ||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 9128871 - 9128969
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||| |||||| |||| |||||||||  || || ||||| |||||||||| ||| ||| ||||| ||||||||| |  ||||| ||||||||    
T  9128871 tgtctattttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 30619148 - 30619075
Alignment:
Q  153 atttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||  ||||||||||| ||| |||||||||| |  |||||| ||||||||| || ||||||||||||||    
T  30619148 atttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 34478836 - 34478900
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||| |||||| |||||||  |||||||| ||||||||| || ||||| |||||||||    
T  34478836 ttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaatg 34478900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 18891736 - 18891818
Alignment:
Q  145 tgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||| ||||||| |  |||||| |||||||||||  ||||   ||||||||| ||||||||||| ||||||||| ||||||    
T  18891736 tgctatcaatttgaatcgttgaagatgaataaagtcaaaaaaatctaaattttaagatttaagttgaaattttgactacaatg 18891818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 39845630 - 39845711
Alignment:
Q  148 tatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgat 229  Q
    ||||||||||| || || ||||||| |||||||| |||||||| ||||||  ||||||| | |  || ||||||||||||||    
T  39845630 tatgaatttgaattgttaaaggtgagtaaagtcgtaaaatcttgaattttgagatttaaatcgtgatcttgacaacaatgat 39845711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 30912446 - 30912542
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||  ||||||  |||| ||||||||  ||||||||||| |||||||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  30912446 ctattttgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 15528141 - 15528239
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||| |||||| |||||||||| |||  || |||||||| |||||||||||||| | ||||||| ||||||||| || ||||||||||||||    
T  15528141 tgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 26053331 - 26053425
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||| |||||||  |||||||||||||  ||||||||||| |||||||||||||| || |||||| ||||||||| || ||||||||||||||    
T  26053331 tattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 26073384 - 26073478
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||| |||||||  |||||||||||||  ||||||||||| |||||||||||||| || |||||| ||||||||| || ||||||||||||||    
T  26073384 tattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 6943491 - 6943591
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||  |||||| ||||  ||||||||  ||||||||||| |||||||||||||| | ||||||| ||||||||| || |||||||||||||||    
T  6943491 tgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatg 6943590  T
Q  228 a 228  Q
    |    
T  6943591 a 6943591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 17543775 - 17543872
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgat 229  Q
    ||||||| |||||| ||||| ||||||||  ||||| ||||| |||||||||||||| | ||||||| ||||||||| |  |||||||||||||||||    
T  17543775 tattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaatgat 17543872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 7223578 - 7223518
Alignment:
Q  167 aggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| |||||||||||||| ||||||||| ||||||||| || |||||||||||||||    
T  7223578 aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 27233308 - 27233407
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||| ||||||| ||||| |||| |||  ||||||||||| |||||| ||||||| |  |||||| ||||||||| || | |||||||||||||    
T  27233308 tgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcggtagtttgacaacaatg 27233407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 5422804 - 5422878
Alignment:
Q  153 atttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||  ||||||||||||||||| |||||||| | |||||||  |||||||| || |||||||||||||||    
T  5422804 atttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatg 5422878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 7918420 - 7918510
Alignment:
Q  136 ttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||| | ||||| |||| |||  ||||||||||| |||||||||||||| | |||||||  |||||||| || ||||||||||||||    
T  7918420 ttaggattttactatggatttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 18490998 - 18491051
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaat 187  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||| |||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaat 18491051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 18491074 - 18491167
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||| ||||||||||||| ||||||||  ||||||||||||||||  |||||||  |  |||||| ||||||||| || ||||||||| |||||    
T  18491074 ttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacagcaatg 18491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 7359911 - 7359849
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||||||||||||||| ||||||||||||||| || |||| | | |||||||||||||||    
T  7359911 ttgaaggtgaataaagtcgctaaatcttaaattttagga-ttaaatcgaaattttgacaacaat 7359849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 4841961 - 4842010
Alignment:
Q  139 ggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatc 188  Q
    ||||||||||| | ||||||||  ||||||||||||||||||||||||||    
T  4841961 ggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatc 4842010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 17103250 - 17103198
Alignment:
Q  178 gtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||||||||| | ||||||| ||||||||| || ||||||||||||||||||    
T  17103250 gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaatgatt 17103198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 2912283 - 2912373
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaac 223  Q
    ||||||| |||||| |||||| ||||| |  |||||| || | ||||| |||||||| ||||||||| ||||||||| || |||||||||||    
T  2912283 tattttaagattctactatga-tttgaatcgttgaagatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 17250152 - 17250057
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||| |||||||  |||| |||| |||  ||||||||||| ||||| |||||||| |  |||||| ||||||||| || ||||| ||||||||    
T  17250152 ctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctggattttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 10958231 - 10958317
Alignment:
Q  141 attctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| ||| |||||| |  |||||||||| | ||||||||||||| | ||||||  ||||||||| |  |||||||||||||||    
T  10958231 attctgcaatggatttgaatccttgaaggtgagtcaagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaatg 10958317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 23897906 - 23897829
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagt 208  Q
    ||||||||| ||| | ||||| ||||||||  ||||| ||||| |||||||||||||| |  |||||| |||||||||    
T  23897906 ctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagt 23897829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 4597195 - 4597278
Alignment:
Q  141 attctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    ||||||| |||||||||| |  || ||| ||||||||||| ||||||| |||| |||| ||||||| |||  |||||||||||||    
T  4597195 attctgcaatgaatttgaatcgttaaagatgaataaagtcacaaaatcctaaa-tttaggatttaaattgtgattttgacaacaa 4597278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 8545031 - 8545087
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttga 219  Q
    ||||| |||| ||||||||||||||| ||||||||| ||||||| | || |||||||    
T  8545031 ttgaaagtgagtaaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 11327605 - 11327701
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| ||||||| ||||| |||| |||  |||||| |||| |||  ||||||| |||  |||||| | ||||||| || |||||||||||||||    
T  11327605 ctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 11326481 - 11326386
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||||| |||||| ||||| |||| |||   |||||||||| |||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  11326481 ctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 26281344 - 26281439
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||| | ||||| | ||| ||||||||  ||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  26281344 tattttggaattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaatg 26281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 22687698 - 22687793
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||| ||||||||| ||| ||||||||| |||||| |||| ||||||||||| || | ||||||| ||||||||| || ||||||||||||||    
T  22687698 ctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcgcaaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 24990105 - 24990200
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||||||| ||||| ||||||||  ||| |||| || |||||| ||||||| ||||||||  ||||||||| |||||||||||||||||    
T  24990105 ctattttaggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaat 24990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 24725511 - 24725609
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgat 229  Q
    |||||||  |||||| ||||| ||||||||| ||||||||||| ||||||| ||||||||  |||||| |||||||||  | |||||||||||||||||    
T  24725511 ctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttgacaacaatgat 24725609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 8571339 - 8571250
Alignment:
Q  130 tctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttga 219  Q
    |||||||||||||||| ||||| ||||||||  || |||||||| |||||||||||||| |  |||||||||||||||| || |||||||    
T  8571339 tctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatgatttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 5715383 - 5715290
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||| | ||||| |||||||||| |||| ||||||||| | |||||||||||||| | ||||||| ||||||||| || ||||||||||||||    
T  5715383 tattttggaattctactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 27221511 - 27221417
Alignment:
Q  133 attttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||| |||||| ||||| ||||||||  |||||| |||| |||||||||||||| | |||||||  ||||||||||| ||||| |||||||||    
T  27221511 attttaagattctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 8346567 - 8346660
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaaca 224  Q
    ||||||| ||||||| ||||| ||||||||  ||||||||||| |||||||||||||| |||||||||  ||||| ||  | ||||||||||||    
T  8346567 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 9685295 - 9685375
Alignment:
Q  148 tatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatga 228  Q
    |||| ||||||||  ||||||||||| |||||||||||||| ||||||||| ||| ||||| |  ||||||||||||||||    
T  9685295 tatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatga 9685375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 14055346 - 14055250
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||| ||||| ||||  ||||||||  ||||||||||| ||||||||||||||||  |||||| ||| ||||| || ||||| |||||||||    
T  14055346 ctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 14365374 - 14365278
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||| ||||| ||||  ||||||||  ||||||||||| ||||||||||||||||  |||||| ||| ||||| || ||||| |||||||||    
T  14365374 ctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 4247451 - 4247356
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||| ||||||| ||||| |||| |||| ||||| ||||| |||||  ||||||| | ||||||| ||||||| |||| ||||||||||||||    
T  4247451 ctattttgggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaat 4247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 8330079 - 8330178
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||||| ||||||| ||||| |||||| |  ||||||||||| |||||||||||||| | |||||||  ||||| ||  | ||||||||||||||||||    
T  8330079 ctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaatgatt 8330178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 21157811 - 21157905
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatga 228  Q
    |||||||||| ||||||| ||||||||  ||| | |||| ||||||||||||| | | ||||||| |||||||||  |||||| |||||||||||    
T  21157811 ttttaggattttgctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaatttcgacaacaatga 21157905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 44944879 - 44944978
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaat----aaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||||||| ||||| |||||| |  |||||||||| |    |||||||||||||| | ||||||| ||||||||| || ||||||||||||||    
T  44944879 ctattttaggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 227
Target Start/End: Original strand, 26565671 - 26565758
Alignment:
Q  140 gattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||||||||| |  || || |||||||||||  ||||||  | ||||||||||||||||   |||||||||||||||||    
T  26565671 gattctgctatgaatttgaatcgttaaaagtgaataaagttacaaaattctgaattttatgatttaaggcagaattttgacaacaatg 26565758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 5058624 - 5058530
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaa 225  Q
    |||||||| |||||| ||||| ||||  ||  ||||||||||| ||| |||||||||  | ||||||| ||||||||| || |||||||||||||    
T  5058624 ctattttaagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 30294236 - 30294175
Alignment:
Q  165 gaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    ||||||||||||| || ||||||| |  |||||| |||||||||||| ||||||||||||||    
T  30294236 gaaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaacaat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 8343835 - 8343891
Alignment:
Q  132 tattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatc 188  Q
    |||||| ||||||| ||||| ||||||||  ||||||||||| ||||||||||||||    
T  8343835 tattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatc 8343891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 21846463 - 21846554
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaat 226  Q
    |||||| ||||| ||||| || |||||  ||||| ||||| |||||||||||||| | |||||||  |||||||| || ||||||||||||||    
T  21846463 ttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 39182354 - 39182259
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| ||||||| ||||| |||| |||  ||||||||||| || ||||||||||| || |||||| |||||||||  | |||||| ||||||||    
T  39182354 ctattttgggattctactatggatttcagtcgttgaaggtgaagaa-gtcgcaaaatcctagattttaggatttaagtcaggattttgtcaacaatg 39182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 11325074 - 11324988
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaatttt 217  Q
    ||||||||| |||||  |||| ||||||||  ||||||||||| ||| || ||||||| | ||||||| ||||||||| || |||||    
T  11325074 ctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 17811445 - 17811347
Alignment:
Q  128 tgtctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||||||  ||||| ||||| ||||||||  ||||||||||| |||||| |||||||   |||||||     ||||| ||||||||||||| ||||    
T  17811445 tgtctattttaaaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcaagaatttta----ataagtcggaattttgacaaaaatg 17811350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 7730377 - 7730472
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||| | ||||| || || ||||||||| || |||||||| |||||||||||| | |  |||||| |||||||||  | |||||||||||||||    
T  7730377 ctattttggaattctactgtggatttgagttgttaaaggtgaagaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 8629995 - 8630091
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    ||||| |||||| ||||| ||||||||  |||||| | | |||||| |||||||| || |||||  || |||||| |  ||||||||||||||||||    
T  8629995 ttttaagattctactatggatttgagtcgttgaagttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaacaatgatt 8630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 26617542 - 26617606
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||| |||||||||||||| | ||||||| |||| ||||  ||||||| | |||||||    
T  26617542 ttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaacaatg 26617606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 37200 - 37296
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||| | |||||||  | |||||||  |||||||| || |||||||||||||||    
T  37200 ctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgacaacaatg 37296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 48825 - 48918
Alignment:
Q  134 ttttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    |||| |||||||  |||| ||||||||  ||||||||||||||||| |||||||  || |||||| ||||||||| |||||||| |||||||||    
T  48825 ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaatg 48918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 8506 - 8438
Alignment:
Q  163 ttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgattg 231  Q
    ||||||||||| |||||||||||||| |  |||||| ||||||||| || |||||||||||||||||||    
T  8506 ttgaaggtgaagaaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaacaatgattg 8438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 9054 - 9153
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatgatt 230  Q
    |||||| |||||| ||||||| ||||||||  ||||||||||||||| || ||||||| || ||||||  |||||| |  | ||||||||||||||||||    
T  9054 ctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaatgatt 9153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1892 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1892
Description:

Target: scaffold1892; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 943 - 886
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatc 188  Q
    ||||||| ||||||||||||  ||||||||| |||||| | | |||||||||||||||    
T  943 ctattttgggattctgctatcgatttgagttgttgaagataagtaaagtcgcaaaatc 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 135 - 212
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagt 208  Q
    ||||||||| ||| | ||||| ||||||||  ||||| ||||| |||||||||||||| |  |||||| |||||||||    
T  135 ctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagt 212  T

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Target: scaffold0417 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 7489 - 7585
Alignment:
Q  131 ctattttaggattctgctatgaatttgagtttttgaaggtgaataaagtcgcaaaatcttaaattttatgatttaagttggaattttgacaacaatg 227  Q
    ||||||||||||||| ||||| ||||   |  |||||||| || |||||||||||||| | |||||||  |||||||| || ||| | |||||||||    
T  7489 ctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattctaacaacaatg 7585  T

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