View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13712_high_6 (Length: 312)
Name: NF13712_high_6
Description: NF13712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13712_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 7367615 - 7367913
Alignment:
| Q |
1 |
atggttagttttttcctgcaaatatgtaaagaaatgaataattgagaatttgaagtgtataaataatagggtgcataatgtcaggcgaagatgatggtat |
100 |
Q |
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| T |
7367615 |
atggttagttttttcctgcaaatatgtaaagaaatgaataattgagaatttgaagtgtataaaaaatacggtgcataatgtcaggcaaagatgatggtat |
7367714 |
T |
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| Q |
101 |
acttctacatcagtagttttaaattcaaagcagtttgtttcattaatagtttcattcacataaatatagtgacgcaaattatatacgtgaccagccaaat |
200 |
Q |
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| T |
7367715 |
acttctacatcagtagttttaaattcaaagcagtttgtttcattaatagtttcattcacataaatatagtgacgcaaattatatacgtgaccagccaaat |
7367814 |
T |
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| Q |
201 |
gaaagagggaaaggtaaaacatactttaatattttgcaataaacactatacaagctcttgtgccgcccagaaatgacatgataagaaatgccttcatct |
299 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7367815 |
gaaagagggaaaggtaaaacgtactttaatattttgcaataaacactatacaagctcttgtgccgcccagaaatgacatgataagaaatgccttcatct |
7367913 |
T |
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