View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13713_low_1 (Length: 757)

Name: NF13713_low_1
Description: NF13713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13713_low_1
NF13713_low_1
[»] chr6 (5 HSPs)
chr6 (1-719)||(14267172-14267890)
chr6 (88-268)||(2326165-2326345)
chr6 (546-604)||(22474559-22474617)
chr6 (546-604)||(16729760-16729818)
chr6 (566-604)||(33292483-33292521)
[»] chr5 (7 HSPs)
chr5 (88-269)||(25832072-25832253)
chr5 (88-268)||(31159004-31159187)
chr5 (88-262)||(31198372-31198549)
chr5 (88-269)||(41352130-41352319)
chr5 (546-605)||(14481694-14481753)
chr5 (566-604)||(17009979-17010017)
chr5 (517-594)||(8376257-8376334)
[»] chr3 (3 HSPs)
chr3 (88-269)||(25791943-25792127)
chr3 (562-604)||(20129444-20129486)
chr3 (546-604)||(15103134-15103192)
[»] chr4 (3 HSPs)
chr4 (88-268)||(17179225-17179405)
chr4 (517-604)||(45837656-45837743)
chr4 (511-604)||(3311905-3311998)
[»] scaffold0548 (1 HSPs)
scaffold0548 (546-604)||(9812-9870)
[»] chr8 (2 HSPs)
chr8 (546-604)||(16230249-16230307)
chr8 (546-604)||(6813849-6813907)
[»] chr2 (2 HSPs)
chr2 (546-604)||(33737108-33737166)
chr2 (566-604)||(22197919-22197957)
[»] chr7 (2 HSPs)
chr7 (566-604)||(23925833-23925871)
chr7 (566-604)||(24501741-24501779)
[»] chr1 (1 HSPs)
chr1 (546-604)||(17176040-17176098)


Alignment Details
Target: chr6 (Bit Score: 655; Significance: 0; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 655; E-Value: 0
Query Start/End: Original strand, 1 - 719
Target Start/End: Complemental strand, 14267890 - 14267172
Alignment:
Q  1 ttgtagcagaaattgatacacttaaaagtgaagtgagaaatatgcttgtcgcagaaacagatgagcctttcgcgaaagttaaactggttgattcaatatg 100  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14267890 ttgtaacacaaattgatacacttaaaagtgaagtgagaaatatgcttgtcgcaaaaacagatgagcctttcgcgaaagttaaactggttgattcaatatg 14267791  T
Q  101 tcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagttcacaagagctgtgttgaaaatggagaagtaattcttgaagac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14267790 tcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagttcacaagagctgtgttgaaaatggagaagtaattcttgaagac 14267691  T
Q  201 aacctttgcgctcttgctgtgctgtttagggtgttgaggcaacaaggattttacgtttcaccgagtataaatgcatataactcatacttatttacatttg 300  Q
    |||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14267690 aaccttttttctcttgctgtgctatttagggtgttgaggcaacaaggattttacgtttcaccgagtataaatgcatataactcatacttatttacatttg 14267591  T
Q  301 ttgatttcactttagtcaattgttaggaactcccttaactctatttaatgaggagaaatgtataaaacacttggtccacaaaaagtatgcatgactagta 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14267590 ttgatttcactttagtcaattgttaggaactcccttaactctatttaatgaggagaaatgtataaaacacttggtccagaaaaagtatgcatgactagta 14267491  T
Q  401 aaaataatagcgtttgtttaaaagcgccatctttgtgaatgtaaataataccgcttttataaaagtgctatattatctaatttataactagtttataata 500  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14267490 aaaataatagcgtttgtttaaaatcgccatctttgtgaacgtaaataataccgcttttataaaagtgctatattatctaatttataactagtttataata 14267391  T
Q  501 gcgcctgtgttaaatcgctataacaggtccatgggatgtctttacaatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattat 600  Q
    || ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14267390 gctcctgtgttaaatcgctataacaggtcagtgggatgtctttacaatagcttttatggagaaaagctattaaaattgtgctattaaaagccaaaattat 14267291  T
Q  601 ggtaacggctcaatttttatttttgtctcaaacacttagcgtcagaaaataaattgtggttagataaatgaattactcgataaatctttgcttatatttg 700  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14267290 ggtaacagctcaatttttatttttgtctcaaacacttagcgtcagaaaataaattgtggttagataaatgaattactcaataaatctttgcttatatttg 14267191  T
Q  701 acactagagagaatagtaa 719  Q
    |||||||||||||||||||    
T  14267190 acactagagagaatagtaa 14267172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 88 - 268
Target Start/End: Original strand, 2326165 - 2326345
Alignment:
Q  88 ttgattcaatatgtcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagttcacaagagctgtgttgaaaatggagaagt 187  Q
    ||||||| |||||||||||||||||||| ||||| |  ||||| || |||||||| ||| ||||| |  |||||||||||| |||||||||||||||| |    
T  2326165 ttgattcgatatgtcgtttgggtgtgagctatcattacgaaaatgagattgatgaagttatgcaatacattcacaagagctatgttgaaaatggagaaat 2326264  T
Q  188 aattcttgaagacaacctttgcgctcttgctgtgctgtttagggtgttgaggcaacaaggattttacgtttcaccgagtat 268  Q
    ||  |||||||||||||||||| ||||| |||| || || ||| |||||||||||||||||||| | || ||||| |||||    
T  2326265 aacgcttgaagacaacctttgcactctttctgttctattcaggctgttgaggcaacaaggatttcatgtgtcacccagtat 2326345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 546 - 604
Target Start/End: Original strand, 22474559 - 22474617
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||||||||| |||||    
T  22474559 aatagcttttatgcagaaacgctattaaaattgtgctattaaaagccaaaattgtggta 22474617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Original strand, 16729760 - 16729818
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    ||||||||||||  | ||| |||||||||||||||||||| |||||||||||| |||||    
T  16729760 aatagcttttatccaaaaacgctattaaaattgtgctattaaaagccaaaattgtggta 16729818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 604
Target Start/End: Original strand, 33292483 - 33292521
Alignment:
Q  566 gctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  33292483 gctattaaaattgtgctattaaaagccaaaattgtggta 33292521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 7e-48; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 88 - 269
Target Start/End: Original strand, 25832072 - 25832253
Alignment:
Q  88 ttgattcaatatgtcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagttcacaagagctgtgttgaaaatggagaagt 187  Q
    ||||||||||||||||| | ||||| |||||||| |||||||| || ||||| || |||||||||||  ||||||| ||||||||||||||||||||| |    
T  25832072 ttgattcaatatgtcgtctcggtgttagttatcattttgaaaacgagattgacgaagttttgcaacatattcacaacagctgtgttgaaaatggagaaat 25832171  T
Q  188 aattcttgaagacaacctttgcgctcttgctgtgctgtttagggtgttgaggcaacaaggattttacgtttcaccgagtata 269  Q
    ||||||| |||||| ||||| | |||| |||||||| |||||||| |||||||||||||||||||| |||||||| ||||||    
T  25832172 aattcttaaagacagcctttactctctcgctgtgctatttagggttttgaggcaacaaggattttatgtttcaccaagtata 25832253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 88 - 268
Target Start/End: Original strand, 31159004 - 31159187
Alignment:
Q  88 ttgattcaatatgtcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagttcacaagagctgtgttgaaaatggagaagt 187  Q
    |||||||||||||||||||||||||||| ||||| |||||||| || ||||| || |||||||||||  |||| ||||  | |||| ||||||||||| |    
T  31159004 ttgattcaatatgtcgtttgggtgtgagctatcattttgaaaatgagattgaagaggttttgcaacatattcataagaattatgttcaaaatggagaaat 31159103  T
Q  188 a---attcttgaagacaacctttgcgctcttgctgtgctgtttagggtgttgaggcaacaaggattttacgtttcaccgagtat 268  Q
    |   ||| ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| || | |||||||| |||||    
T  31159104 aattatttttgaagacaacctttgctctcttgctgtgctatttaggttgttgaggcaacaaggacttcatgtttcaccaagtat 31159187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 88 - 262
Target Start/End: Original strand, 31198372 - 31198549
Alignment:
Q  88 ttgattcaatatgtcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagttcacaagagctgtgttgaaaatggagaagt 187  Q
    ||||||||||||| || |||||||||||||||||||||||||| || ||||| || |||||||||||  |||| ||||  | |||| ||||||||||| |    
T  31198372 ttgattcaatatgccgcttgggtgtgagttatcactttgaaaaggagattgaagaggttttgcaacatattcataagaattatgttcaaaatggagaaat 31198471  T
Q  188 aattctt---gaagacaacctttgcgctcttgctgtgctgtttagggtgttgaggcaacaaggattttacgtttcacc 262  Q
    |||| ||   ||| ||||||||||| ||||||||||||| |||||| || |||||||||||||| || ||||||||||    
T  31198472 aattattttcgaaaacaacctttgctctcttgctgtgctatttaggttgctgaggcaacaaggacttcacgtttcacc 31198549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 88 - 269
Target Start/End: Complemental strand, 41352319 - 41352130
Alignment:
Q  88 ttgattcaatatgtcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagt--tcacaagagctgtgttgaaaatggagaa 185  Q
    ||||||||||||||||||||||  | || ||||| |||||| | || ||||| || ||||||| |||  |  |||||| |  | ||||||||||||||||    
T  41352319 ttgattcaatatgtcgtttgggaataagctatcattttgaacatgagattgaagaggttttgctacatatattcacaataattatgttgaaaatggagaa 41352220  T
Q  186 gtaat------tcttgaagacaacctttgcgctcttgctgtgctgtttagggtgttgaggcaacaaggattttacgtttcaccgagtata 269  Q
     ||||      | ||||||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||| |||||||||| ||||||    
T  41352219 ataataattacttttgaagacaacatttgctctcttgctgtgctatttaggttgttgaggcaacaaggatttcacgtttcaccaagtata 41352130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 605
Target Start/End: Complemental strand, 14481753 - 14481694
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggtaa 605  Q
    ||||||||||||| | ||| |||||||||||||||||||| || ||||||||| ||||||    
T  14481753 aatagcttttatgtacaaacgctattaaaattgtgctattaaaggccaaaattgtggtaa 14481694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 604
Target Start/End: Original strand, 17009979 - 17010017
Alignment:
Q  566 gctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  17009979 gctattaaaattgtgctattaaaagccaaaattgtggta 17010017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 594
Target Start/End: Original strand, 8376257 - 8376334
Alignment:
Q  517 gctataacaggtccatgggatgtctttacaatagcttttatggagaaaagctattaaaattgtgctattgaaagccaa 594  Q
    ||||||||||||| ||||| ||  ||| ||||||| |||||  ||||  ||||||||| |||||||||| ||||||||    
T  8376257 gctataacaggtctatgggttgcattttcaatagcatttatctagaagcgctattaaacttgtgctattaaaagccaa 8376334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 88 - 269
Target Start/End: Original strand, 25791943 - 25792127
Alignment:
Q  88 ttgattcaatatgtcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagttcacaagagctgtgttgaaaatggagaagt 187  Q
    ||||||| ||||| ||||||||| |||  ||||| |||||| | || ||||||||  |||||||| |  |||||||||  | |||| ||||||||||| |    
T  25791943 ttgattcgatatgccgtttgggtttgaactatcattttgaagatgagattgatgagattttgcaagatattcacaagaattatgttcaaaatggagaaat 25792042  T
Q  188 aattc---ttgaagacaacctttgcgctcttgctgtgctgtttagggtgttgaggcaacaaggattttacgtttcaccgagtata 269  Q
    ||||    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| || |||||||||| ||||||    
T  25792043 aattacttttgaagacaacctttgctctcttgctgtgctatttaggttgttgaggcaacaaggacttcacgtttcaccaagtata 25792127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 604
Target Start/End: Complemental strand, 20129486 - 20129444
Alignment:
Q  562 aaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  20129486 aaaagctattaaaattgtgctattaaaagccaaaattatggta 20129444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Original strand, 15103134 - 15103192
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||| |||||  ||||| |||||||||||||||||||| |||||||||||| |||||    
T  15103134 aatagcatttatccagaaacgctattaaaattgtgctattaaaagccaaaattgtggta 15103192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 88 - 268
Target Start/End: Original strand, 17179225 - 17179405
Alignment:
Q  88 ttgattcaatatgtcgtttgggtgtgagttatcactttgaaaaagaaattgatgatgttttgcaacaagttcacaagagctgtgttgaaaatggagaagt 187  Q
    |||||||||||||||||||||||||||  ||||| ||| || | ||||||||||| | |||||  ||  ||||  ||| ||||||||||||||||||  |    
T  17179225 ttgattcaatatgtcgtttgggtgtgaactatcattttcaacatgaaattgatgaagctttgctgcactttcatgagaactgtgttgaaaatggagatct 17179324  T
Q  188 aattcttgaagacaacctttgcgctcttgctgtgctgtttagggtgttgaggcaacaaggattttacgtttcaccgagtat 268  Q
     ||| ||||||||||||||  | |  |  | ||||| |||||| | |||||||||||||||||||  |||||||| |||||    
T  17179325 tattattgaagacaaccttcacaccatctcagtgctatttaggttattgaggcaacaaggattttgtgtttcaccaagtat 17179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 604
Target Start/End: Complemental strand, 45837743 - 45837656
Alignment:
Q  517 gctataacaggtccatgggatgtctttacaatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    ||||||||| ||| ||||| ||  |||  |||||| |||||  ||||  |||||||||||||||||||| |||||||||||| |||||    
T  45837743 gctataacacgtctatgggttgcatttttaatagcatttatccagaagggctattaaaattgtgctattaaaagccaaaattgtggta 45837656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 604
Target Start/End: Complemental strand, 3311998 - 3311905
Alignment:
Q  511 taaatcgctataacaggtccatgggatgtctttacaatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||| |||||||||||||| ||||| ||  |||  |||||| |||||  |||   |||||| ||||||||||||| |||||||||||| |||||    
T  3311998 taaagcgctataacaggtctatgggttgcatttttaatagcgtttatccagatgcgctattgaaattgtgctattaaaagccaaaattgtggta 3311905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 9870 - 9812
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||| |||||  ||||| |||||||||||||||||||| |||||||||||| |||||    
T  9870 aatagcatttatccagaaacgctattaaaattgtgctattaaaagccaaaattgtggta 9812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 16230307 - 16230249
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||| |||||  ||||| |||||||||||||||||||| |||||||||||| |||||    
T  16230307 aatagcatttatctagaaacgctattaaaattgtgctattaaaagccaaaattgtggta 16230249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 6813907 - 6813849
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    ||||||||||||  | ||| ||||||||||||| |||||| |||||||||||| |||||    
T  6813907 aatagcttttatccataaacgctattaaaattgcgctattaaaagccaaaattgtggta 6813849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Original strand, 33737108 - 33737166
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||| |||||| ||||| |||||||||||||||||||| || ||||||||| |||||    
T  33737108 aatagcatttatgtagaaacgctattaaaattgtgctattaaaggccaaaattgtggta 33737166  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 604
Target Start/End: Complemental strand, 22197957 - 22197919
Alignment:
Q  566 gctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  22197957 gctattaaaattgtgctatttaaagccaaaattgtggta 22197919  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 604
Target Start/End: Original strand, 23925833 - 23925871
Alignment:
Q  566 gctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  23925833 gctattaaaattgtgctattaaaagccaaaattgtggta 23925871  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 566 - 604
Target Start/End: Original strand, 24501741 - 24501779
Alignment:
Q  566 gctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  24501741 gctattaaaattgtgctattaaaagccaaaattgtggta 24501779  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 17176098 - 17176040
Alignment:
Q  546 aatagcttttatggagaaaagctattaaaattgtgctattgaaagccaaaattatggta 604  Q
    |||||| |||||  ||||| |||||||||||| ||||||| |||||||||||| |||||    
T  17176098 aatagcatttatccagaaacgctattaaaattatgctattaaaagccaaaattgtggta 17176040  T

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