View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13714_high_10 (Length: 336)

Name: NF13714_high_10
Description: NF13714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13714_high_10
NF13714_high_10
[»] chr1 (26 HSPs)
chr1 (183-318)||(27136488-27136623)
chr1 (1-49)||(4349735-4349783)
chr1 (1-49)||(27474377-27474425)
chr1 (28-93)||(27136620-27136685)
chr1 (1-46)||(46247969-46248014)
chr1 (1-49)||(6925197-6925245)
chr1 (1-49)||(10668324-10668372)
chr1 (1-49)||(19414534-19414582)
chr1 (1-49)||(19701668-19701716)
chr1 (2-50)||(33594143-33594191)
chr1 (1-49)||(35005222-35005270)
chr1 (1-49)||(42304220-42304268)
chr1 (1-49)||(45402193-45402241)
chr1 (1-49)||(46991901-46991949)
chr1 (1-49)||(50606500-50606548)
chr1 (1-48)||(27201746-27201793)
chr1 (1-42)||(15505661-15505702)
chr1 (1-42)||(18944742-18944783)
chr1 (1-49)||(2435799-2435847)
chr1 (1-49)||(4587576-4587624)
chr1 (1-49)||(14617135-14617183)
chr1 (1-49)||(18741970-18742018)
chr1 (1-49)||(30395739-30395787)
chr1 (1-49)||(30555212-30555260)
chr1 (1-49)||(34725111-34725159)
chr1 (1-49)||(35253200-35253248)
[»] chr4 (34 HSPs)
chr4 (1-59)||(20908639-20908697)
chr4 (2-59)||(30690179-30690236)
chr4 (1-49)||(20639671-20639719)
chr4 (1-49)||(38755921-38755969)
chr4 (1-49)||(44363143-44363191)
chr4 (1-48)||(33836501-33836548)
chr4 (1-59)||(5648332-5648390)
chr4 (1-46)||(14983908-14983953)
chr4 (1-50)||(21489162-21489211)
chr4 (1-49)||(6430639-6430687)
chr4 (1-49)||(11394926-11394974)
chr4 (1-49)||(11404653-11404701)
chr4 (1-49)||(23501863-23501911)
chr4 (1-49)||(30352593-30352641)
chr4 (1-49)||(32484307-32484355)
chr4 (1-49)||(35567244-35567292)
chr4 (13-49)||(37038136-37038172)
chr4 (1-49)||(40553950-40553998)
chr4 (1-48)||(47482864-47482911)
chr4 (1-59)||(30639453-30639511)
chr4 (1-49)||(487139-487187)
chr4 (1-48)||(7909294-7909342)
chr4 (1-45)||(16911638-16911682)
chr4 (1-49)||(20225056-20225104)
chr4 (1-49)||(20225150-20225198)
chr4 (1-49)||(25388250-25388298)
chr4 (1-49)||(25629123-25629171)
chr4 (1-49)||(29207911-29207959)
chr4 (13-49)||(35532078-35532114)
chr4 (1-49)||(38786683-38786731)
chr4 (1-49)||(40915902-40915950)
chr4 (1-41)||(49796871-49796911)
chr4 (1-49)||(51865051-51865099)
chr4 (13-49)||(54730338-54730374)
[»] chr2 (22 HSPs)
chr2 (1-59)||(14444802-14444860)
chr2 (1-49)||(9671253-9671301)
chr2 (1-49)||(10543774-10543822)
chr2 (1-49)||(10546237-10546285)
chr2 (1-49)||(14530394-14530442)
chr2 (2-48)||(34766330-34766376)
chr2 (1-49)||(8455329-8455377)
chr2 (1-49)||(23488557-23488605)
chr2 (2-50)||(24890486-24890534)
chr2 (1-49)||(26684633-26684681)
chr2 (1-49)||(36871566-36871613)
chr2 (1-49)||(40579762-40579810)
chr2 (1-49)||(5841104-5841152)
chr2 (7-59)||(8575975-8576027)
chr2 (1-49)||(11514510-11514557)
chr2 (1-49)||(14544140-14544188)
chr2 (1-49)||(21779274-21779322)
chr2 (1-49)||(25079730-25079778)
chr2 (1-49)||(25249751-25249799)
chr2 (1-45)||(31158456-31158500)
chr2 (1-49)||(41409936-41409984)
chr2 (1-49)||(44643597-44643645)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-50)||(10884-10933)
[»] scaffold0057 (2 HSPs)
scaffold0057 (1-49)||(46905-46953)
scaffold0057 (1-48)||(24786-24833)
[»] chr6 (11 HSPs)
chr6 (1-49)||(29355868-29355916)
chr6 (1-49)||(6808469-6808517)
chr6 (1-59)||(9161198-9161256)
chr6 (1-42)||(12221935-12221976)
chr6 (1-46)||(24097651-24097696)
chr6 (1-49)||(1347036-1347084)
chr6 (1-49)||(1354770-1354818)
chr6 (1-49)||(12885987-12886035)
chr6 (1-49)||(12892083-12892131)
chr6 (1-49)||(13267799-13267847)
chr6 (1-49)||(23930140-23930188)
[»] chr5 (17 HSPs)
chr5 (1-49)||(16957388-16957436)
chr5 (1-49)||(25622534-25622582)
chr5 (1-49)||(38879657-38879705)
chr5 (1-49)||(7097773-7097821)
chr5 (1-49)||(24448964-24449012)
chr5 (1-49)||(43574680-43574728)
chr5 (2-49)||(3771414-3771461)
chr5 (1-40)||(21542489-21542528)
chr5 (1-48)||(27328828-27328875)
chr5 (1-43)||(10306493-10306535)
chr5 (1-50)||(19142955-19143004)
chr5 (1-49)||(12006341-12006389)
chr5 (1-49)||(12477133-12477181)
chr5 (1-49)||(16880660-16880708)
chr5 (1-49)||(21784345-21784393)
chr5 (1-49)||(32703496-32703544)
chr5 (1-49)||(43334279-43334326)
[»] chr3 (25 HSPs)
chr3 (1-49)||(13628803-13628851)
chr3 (1-49)||(40272825-40272873)
chr3 (1-49)||(54484787-54484835)
chr3 (1-59)||(29366723-29366781)
chr3 (1-49)||(829455-829503)
chr3 (2-49)||(45948851-45948898)
chr3 (1-59)||(10795426-10795484)
chr3 (1-59)||(16735536-16735594)
chr3 (1-43)||(46421054-46421096)
chr3 (2-59)||(14266375-14266431)
chr3 (2-59)||(26573224-26573281)
chr3 (1-58)||(54374349-54374406)
chr3 (1-49)||(353362-353410)
chr3 (1-49)||(516508-516556)
chr3 (1-49)||(5173732-5173780)
chr3 (1-49)||(13730615-13730663)
chr3 (1-49)||(22609861-22609909)
chr3 (1-49)||(24851314-24851362)
chr3 (1-49)||(25517183-25517231)
chr3 (1-49)||(34420656-34420704)
chr3 (1-49)||(34771377-34771425)
chr3 (1-49)||(39203610-39203658)
chr3 (1-49)||(45786227-45786275)
chr3 (1-49)||(52926232-52926280)
chr3 (1-49)||(53996578-53996626)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-48)||(59053-59100)
[»] chr8 (20 HSPs)
chr8 (2-49)||(27507985-27508032)
chr8 (1-48)||(28817640-28817687)
chr8 (1-59)||(29877168-29877226)
chr8 (1-49)||(12625964-12626012)
chr8 (1-49)||(20284082-20284130)
chr8 (1-49)||(21070710-21070758)
chr8 (1-49)||(35261753-35261801)
chr8 (1-49)||(36720870-36720918)
chr8 (1-49)||(39461007-39461055)
chr8 (1-49)||(44530223-44530271)
chr8 (1-47)||(13160775-13160821)
chr8 (1-49)||(7136540-7136588)
chr8 (1-49)||(8897777-8897825)
chr8 (1-49)||(12670263-12670311)
chr8 (1-49)||(26102591-26102639)
chr8 (13-49)||(27468105-27468141)
chr8 (1-49)||(28407477-28407525)
chr8 (1-49)||(30454110-30454158)
chr8 (1-49)||(35107324-35107372)
chr8 (1-49)||(45071338-45071386)
[»] chr7 (22 HSPs)
chr7 (1-59)||(18512456-18512514)
chr7 (1-51)||(21139759-21139809)
chr7 (2-59)||(45018926-45018983)
chr7 (1-49)||(2541032-2541080)
chr7 (1-49)||(7879712-7879760)
chr7 (1-49)||(35334829-35334877)
chr7 (5-49)||(38262209-38262253)
chr7 (2-49)||(18747562-18747609)
chr7 (1-59)||(10693076-10693134)
chr7 (1-42)||(27889336-27889377)
chr7 (1-42)||(43557548-43557589)
chr7 (1-49)||(21172022-21172070)
chr7 (1-49)||(21566510-21566558)
chr7 (5-49)||(23231635-23231679)
chr7 (1-49)||(32758333-32758381)
chr7 (1-45)||(34626225-34626269)
chr7 (1-49)||(39123969-39124017)
chr7 (1-49)||(40463950-40463998)
chr7 (1-49)||(42391113-42391161)
chr7 (13-49)||(42495875-42495911)
chr7 (1-49)||(42805600-42805648)
chr7 (1-49)||(48735135-48735183)
[»] scaffold1176 (1 HSPs)
scaffold1176 (5-58)||(1591-1644)
[»] scaffold0954 (1 HSPs)
scaffold0954 (5-49)||(3622-3666)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-49)||(13037-13085)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-49)||(24146-24194)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-49)||(30651-30699)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-49)||(48647-48695)


Alignment Details
Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 318
Target Start/End: Complemental strand, 27136623 - 27136488
Alignment:
Q  183 ttcctaaatttgcaaggcaatgtccctatctatagttattaaatttagcaaaattatcacacaaacatcctcaggtgtgtctcctactagtaatttgatt 282  Q
    |||| |||| |||||||| ||||| ||||||||||| | |  ||||| ||||||||||||| |||||||||   |||| ||| ||||||||||||||||     
T  27136623 ttccaaaatatgcaaggcgatgtcactatctatagtcaatggatttatcaaaattatcacaaaaacatccttgagtgtatcttctactagtaatttgatg 27136524  T
Q  283 gaccaaattgatttatggaagaccaattcaagaacc 318  Q
    ||||||||||| |||||||||||||||||| |||||    
T  27136523 gaccaaattgacttatggaagaccaattcaggaacc 27136488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4349735 - 4349783
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  4349735 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 4349783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27474377 - 27474425
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  27474377 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 27474425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 27136685 - 27136620
Alignment:
Q  28 gtatgcgggagctttagtgcactagggtgcccaacaatggtgagattacatcactccaaattttcc 93  Q
    |||||||||||||  |||||||  |  | ||||||||||||||||||||||| |||||||||||||    
T  27136685 gtatgcgggagctccagtgcaccggacttcccaacaatggtgagattacatctctccaaattttcc 27136620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46248014 - 46247969
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtg 46  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||    
T  46248014 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 46247969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6925197 - 6925245
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| |||||||  | ||||||||||||||||||||||||||    
T  6925197 atggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcac 6925245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10668324 - 10668372
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| |||||||  | ||||||||||||||||||||||||||    
T  10668324 atggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcac 10668372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19414534 - 19414582
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| |||||||||| |||| |||||||||||| ||||||||    
T  19414534 atggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcac 19414582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19701668 - 19701716
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||||| || ||||||| || ||||||||||||||||||||||||||    
T  19701668 atggtggggccccttcccggaccctgcgtatgcgggagctttagtgcac 19701716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 33594191 - 33594143
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcact 50  Q
    |||||||||| ||||||  || |||||||||||||||||||||||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcact 33594143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35005222 - 35005270
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||| ||||||||||||    
T  35005222 atggtgggaccccttcccggaccctgcgtatgcgggcgctttagtgcac 35005270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42304268 - 42304220
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||| ||||||||||||||||    
T  42304268 atggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcac 42304220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45402193 - 45402241
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||  || ||||||||||||||||||||||||||    
T  45402193 atggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcac 45402241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46991901 - 46991949
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||| ||||||||||||||||    
T  46991901 atggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcac 46991949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50606500 - 50606548
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||||||||||||    
T  50606500 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcac 50606548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27201746 - 27201793
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgca 48  Q
    ||||||||||| ||||||| ||  ||||||||||||||||||||||||    
T  27201746 atggtgggaccccttcccggaccttgcgtatgcgggagctttagtgca 27201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15505661 - 15505702
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagcttt 42  Q
    ||||||||||| ||||||| || |||||||||||||||||||    
T  15505661 atggtgggaccccttcccgaaccctgcgtatgcgggagcttt 15505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18944742 - 18944783
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagcttt 42  Q
    ||||||||||| ||||||| || |||||||||||||||||||    
T  18944742 atggtgggaccccttcccggaccctgcgtatgcgggagcttt 18944783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2435847 - 2435799
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||| |||||| || || ||||||||||||||||||||    
T  2435847 atggtgggacccctttccgtaccctccgcatgcgggagctttagtgcac 2435799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4587624 - 4587576
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| ||||||||||||| |||||||    
T  4587624 atggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcac 4587576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14617135 - 14617183
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||| | ||||||| || |||| |||||||||||||||||||||    
T  14617135 atggtgggatcccttcccggaccctgcatatgcgggagctttagtgcac 14617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18742018 - 18741970
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||  || ||||||||||| ||||||||||||||    
T  18742018 atggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcac 18741970  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30395787 - 30395739
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || | || |||||||||||||||||||||    
T  30395787 atggtgggaccccttcccggaccccgcatatgcgggagctttagtgcac 30395739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30555212 - 30555260
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| |||| || || ||||||||||| ||||||||||||||    
T  30555212 atggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcac 30555260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34725159 - 34725111
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  34725159 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 34725111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35253248 - 35253200
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  35253248 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 35253200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20908697 - 20908639
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||| ||| |||||    
T  20908697 atggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccc 20908639  T

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Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 30690236 - 30690179
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    |||||||||| ||||||| || |||||||||||||||||||||||||| ||| |||||    
T  30690236 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgccc 30690179  T

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Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20639719 - 20639671
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  20639719 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 20639671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38755969 - 38755921
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  38755969 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 38755921  T

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Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44363191 - 44363143
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  44363191 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 44363143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33836548 - 33836501
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgca 48  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||    
T  33836548 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 33836501  T

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Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5648332 - 5648390
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||||| || |||||||||||||||||| |||||||| || |||||    
T  5648332 atggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgccc 5648390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14983908 - 14983953
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtg 46  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||    
T  14983908 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtg 14983953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21489162 - 21489211
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcact 50  Q
    ||||||||||| ||||||| || ||||||||||||||||||| |||||||    
T  21489162 atggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcact 21489211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6430687 - 6430639
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  6430687 atggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcac 6430639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11394926 - 11394974
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||| ||| || ||||||||||||||||||||||||||    
T  11394926 atggtgggacccctttccggaccctgcgtatgcgggagctttagtgcac 11394974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11404653 - 11404701
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||| ||| || ||||||||||||||||||||||||||    
T  11404653 atggtgggacccctttccggaccctgcgtatgcgggagctttagtgcac 11404701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23501863 - 23501911
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||||||||||||    
T  23501863 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcac 23501911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30352641 - 30352593
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| |||| || || ||||||||||||||||||||||||||    
T  30352641 atggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcac 30352593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32484307 - 32484355
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||||||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcac 32484355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35567244 - 35567292
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||||| |||||||||||||||||||    
T  35567244 atggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcac 35567292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 37038172 - 37038136
Alignment:
Q  13 cttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||||||| ||||||||||||||||||||||||||    
T  37038172 cttcccgtaccctgcgtatgcgggagctttagtgcac 37038136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40553998 - 40553950
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||| |||| ||||||| || ||||||||||||||||||||||||||    
T  40553998 atggtgtgaccccttcccggaccctgcgtatgcgggagctttagtgcac 40553950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47482911 - 47482864
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgca 48  Q
    ||||||||||| ||||||| || ||||||||||||||||||| |||||    
T  47482911 atggtgggaccccttcccggaccctgcgtatgcgggagctttggtgca 47482864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30639453 - 30639511
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    |||||| |||| ||||||| || |||| |||||||||||||||||||||| || |||||    
T  30639453 atggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgccc 30639511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 487187 - 487139
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||| |||||| ||||||| | |||||| ||||||||||||||||||||    
T  487187 atggcgggaccccttcccggattctgcgaatgcgggagctttagtgcac 487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7909342 - 7909294
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgc-gggagctttagtgca 48  Q
    ||||||||||| ||||||| || |||||||||| |||||||||||||||    
T  7909342 atggtgggaccccttcccgaaccctgcgtatgcggggagctttagtgca 7909294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16911638 - 16911682
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagt 45  Q
    ||||||||||| ||||||| || ||||||| ||||||||||||||    
T  16911638 atggtgggaccccttcccggaccctgcgtacgcgggagctttagt 16911682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20225056 - 20225104
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  20225056 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 20225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20225150 - 20225198
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || | || |||||||||||||||||||||    
T  20225150 atggtgggaccccttcccggaccccgcatatgcgggagctttagtgcac 20225198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25388250 - 25388298
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||  ||||||||||||||    
T  25388250 atggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcac 25388298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25629123 - 25629171
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || || | |||||||||||||||||||||    
T  25629123 atggtgggaccccttcccggaccctacatatgcgggagctttagtgcac 25629171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29207959 - 29207911
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  29207959 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 29207911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 35532078 - 35532114
Alignment:
Q  13 cttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||| || ||||||||||||||||||||||||||    
T  35532078 cttcccggaccctgcgtatgcgggagctttagtgcac 35532114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38786683 - 38786731
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  38786683 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 38786731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40915902 - 40915950
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||| | ||||||| || |||||||||||||||||| |||||||    
T  40915902 atggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcac 40915950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49796871 - 49796911
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctt 41  Q
    ||||||||||| ||||||| || ||||||||||||||||||    
T  49796871 atggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 51865099 - 51865051
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||||| || ||||||| || |||||||||||||||||||| |||||    
T  51865099 atggtggggccccttcccggaccctgcgtatgcgggagctttattgcac 51865051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 54730338 - 54730374
Alignment:
Q  13 cttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||| || ||||||||||||||||||||||||||    
T  54730338 cttcccggaccctgcgtatgcgggagctttagtgcac 54730374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14444802 - 14444860
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||| ||| |||||    
T  14444802 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccc 14444860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9671253 - 9671301
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  9671253 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 9671301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10543774 - 10543822
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  10543774 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 10543822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10546237 - 10546285
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  10546237 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 10546285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14530394 - 14530442
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  14530394 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 14530442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 34766330 - 34766376
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgca 48  Q
    |||||||||| ||||||| || |||||||||||||||||||||||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 34766376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8455377 - 8455329
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||||||||| |||||||||||||||    
T  8455377 atggtgggaccccttcccggaccctgcgtatgccggagctttagtgcac 8455329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23488557 - 23488605
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||| ||||||||||||||    
T  23488557 atggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcac 23488605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 24890486 - 24890534
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcact 50  Q
    |||||||||| ||||||| || |||||||||| ||||||||||||||||    
T  24890486 tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcact 24890534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26684681 - 26684633
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||||||||||||||||||| |||||    
T  26684681 atggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcac 26684633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36871566 - 36871613
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  36871566 atggtgggaccccttcccggac-ctgcgtatgcgggagctttagtgcac 36871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40579810 - 40579762
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||| ||||||||||||||||||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtgcac 40579762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5841104 - 5841152
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || | || |||||||||||||||||||||    
T  5841104 atggtgggaccccttcccggaccccgcatatgcgggagctttagtgcac 5841152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 8575975 - 8576027
Alignment:
Q  7 ggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||| ||||||| || ||||||||| |||||||||||||||| ||| |||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcaccaggttgccc 8576027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11514510 - 11514557
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||  || ||||||||||||||||||||||||||    
T  11514510 atggtgggacc-cttcccagaccctgcgtatgcgggagctttagtgcac 11514557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14544140 - 14544188
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||| ||||| ||||| | || ||||||||||||||||||||||||||    
T  14544140 atggtcggaccccttccgggaccctgcgtatgcgggagctttagtgcac 14544188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21779322 - 21779274
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  21779322 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 21779274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25079778 - 25079730
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||  ||||||||||||||    
T  25079778 atggtgggaccccttcccggaccctgcgtatgcaagagctttagtgcac 25079730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25249799 - 25249751
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||| | ||||||| || ||||||||||| ||||||||||||||    
T  25249799 atggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcac 25249751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31158500 - 31158456
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagt 45  Q
    ||||||||||| ||||||  || ||||||||||||||||||||||    
T  31158500 atggtgggaccccttcccagaccctgcgtatgcgggagctttagt 31158456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41409936 - 41409984
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| ||||||||||||| |||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcac 41409984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44643597 - 44643645
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||  || |||||||||||||||| |||||||||    
T  44643597 atggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcac 44643645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10884 - 10933
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcact 50  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||    
T  10884 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcact 10933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46905 - 46953
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  46905 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 46953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24833 - 24786
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgca 48  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||    
T  24833 atggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgca 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29355916 - 29355868
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  29355916 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 29355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6808469 - 6808517
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||| ||||||||||||||||||||||    
T  6808469 atggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcac 6808517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9161198 - 9161256
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| |||| || || |||||||||||| ||||||||||||| ||| |||||    
T  9161198 atggtgggaccccttctcggaccctgcgtatgcggaagctttagtgcaccaggttgccc 9161256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12221976 - 12221935
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagcttt 42  Q
    ||||||||||| ||||||| || |||||||||||||||||||    
T  12221976 atggtgggaccccttcccggaccctgcgtatgcgggagcttt 12221935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24097651 - 24097696
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtg 46  Q
    ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  24097651 atggtgggaccccttcccggaccctgcgtatgcggaagctttagtg 24097696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1347036 - 1347084
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  1347036 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 1347084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1354818 - 1354770
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  1354818 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 1354770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12885987 - 12886035
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||  || ||||||||| ||||||||||||||||    
T  12885987 atggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcac 12886035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12892083 - 12892131
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || | || |||||||||||||||||||||    
T  12892083 atggtgggaccccttcccggaccccgcatatgcgggagctttagtgcac 12892131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13267799 - 13267847
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||| | || |||||||||||||||||| |||||||    
T  13267799 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcac 13267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23930188 - 23930140
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| |||| || || |||| |||||||||||||||||||||    
T  23930188 atggtgggaccccttcacggaccctgcttatgcgggagctttagtgcac 23930140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16957388 - 16957436
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  16957388 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 16957436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25622534 - 25622582
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  25622534 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 25622582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38879657 - 38879705
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  38879657 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 38879705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7097821 - 7097773
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||| |||| ||||||| || ||||||||||||||||||||||||||    
T  7097821 atggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcac 7097773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24448964 - 24449012
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||||||||| |||||||||||||||    
T  24448964 atggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24449012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43574680 - 43574728
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  43574680 atggtgggaccccttcccggaccctgcgtatgcgggagctttagagcac 43574728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 3771414 - 3771461
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  3771414 tggtgggaccccttcccggactctgtgtatgtgggagctttagtgcac 3771461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21542528 - 21542489
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagct 40  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  21542528 atggtgggaccccttcccggactctgcgtatgcgggagct 21542489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27328828 - 27328875
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgca 48  Q
    ||||||||||| ||||||| || |||||||||||||||||||| ||||    
T  27328828 atggtgggaccccttcccgaaccctgcgtatgcgggagctttaatgca 27328875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10306535 - 10306493
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagcttta 43  Q
    ||||||||||| ||||||| || ||||||||||||||||||||    
T  10306535 atggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19143004 - 19142955
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcact 50  Q
    ||||||||||| ||||||| ||  |||||||||||||| |||||||||||    
T  19143004 atggtgggaccccttcccggaccatgcgtatgcgggagatttagtgcact 19142955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12006389 - 12006341
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||  || |||| |||||||||||||||||||||    
T  12006389 atggtgggaccccttcccagaccctgcctatgcgggagctttagtgcac 12006341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12477181 - 12477133
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| | |||||||||||  ||||||||||||||    
T  12477181 atggtgggaccccttcccggattctgcgtatgcaagagctttagtgcac 12477133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16880708 - 16880660
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||| |||| ||||||| ||  |||||||||||||||||||||||||    
T  16880708 atggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcac 16880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21784393 - 21784345
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||| ||| || ||||||||||||||| ||||||||||    
T  21784393 atggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcac 21784345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32703496 - 32703544
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  32703496 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 32703544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43334279 - 43334326
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||||||||    
T  43334279 atggtgggaccccttcccggaccctgcg-atgcgggagctttagtgcac 43334326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13628851 - 13628803
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  13628851 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 13628803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40272873 - 40272825
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  40272873 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 40272825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54484787 - 54484835
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  54484787 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 54484835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29366781 - 29366723
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||||| || ||||||||| ||||||||||||||||| || |||||    
T  29366781 atggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgccc 29366723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 829503 - 829455
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||||||||| |||||||||||||||    
T  829503 atggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcac 829455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 45948898 - 45948851
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||||||| |||| || || ||||||||||||||||||||||||||    
T  45948898 tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcac 45948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10795484 - 10795426
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||||| ||| |||||    
T  10795484 atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgccc 10795426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16735536 - 16735594
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||||| || |||||||||||| ||||| |||||||| || |||||    
T  16735536 atggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccc 16735594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46421096 - 46421054
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagcttta 43  Q
    ||||||||||| ||||||| || ||||||||||||||||||||    
T  46421096 atggtgggaccccttcccggaccctgcgtatgcgggagcttta 46421054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 14266431 - 14266375
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    |||||||||| ||||| | || ||||||||||||||||||||||||||| || |||||    
T  14266431 tggtgggacc-cttcctgaaccctgcgtatgcgggagctttagtgcactgggttgccc 14266375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 26573224 - 26573281
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    |||||||||| | ||||| || ||||||||||| |||||||||||||| ||| |||||    
T  26573224 tggtgggaccccatcccggaccctgcgtatgcgtgagctttagtgcaccaggctgccc 26573281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 54374406 - 54374349
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgcc 58  Q
    ||||||||||| ||||||| || |||| ||||||||||||||||| ||| ||| ||||    
T  54374406 atggtgggaccccttcccggaccctgcatatgcgggagctttagttcaccaggctgcc 54374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 353410 - 353362
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || | || |||||||||||||||||||||    
T  353410 atggtgggaccccttcccggaccccgcatatgcgggagctttagtgcac 353362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 516508 - 516556
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||| |||||| ||||||  || ||||||||||||||||||||||||||    
T  516508 atggcgggaccccttccccgaccctgcgtatgcgggagctttagtgcac 516556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5173780 - 5173732
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||||| || ||||||| ||  |||||||||||||||||||||||||    
T  5173780 atggtggggccccttcccggaccttgcgtatgcgggagctttagtgcac 5173732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13730663 - 13730615
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || | || |||||||||||||||||||||    
T  13730663 atggtgggaccccttcccggaccccgcatatgcgggagctttagtgcac 13730615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22609861 - 22609909
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| ||  ||||||||||||||||| |||||||    
T  22609861 atggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcac 22609909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24851362 - 24851314
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| |  |||| |||||||||||||||||||||    
T  24851362 atggtgggaccccttcccggatcctgcatatgcgggagctttagtgcac 24851314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25517231 - 25517183
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| |  |||||||||| |||||||||||||||    
T  25517231 atggtgggaccccttcccggatcctgcgtatgctggagctttagtgcac 25517183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34420704 - 34420656
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| ||  |||||||| ||||||||||||||||    
T  34420704 atggtgggaccccttcccggaccttgcgtatgtgggagctttagtgcac 34420656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34771425 - 34771377
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  34771425 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 34771377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39203610 - 39203658
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| ||  ||| |||||||||||||||||||||    
T  39203610 atggtgggaccccttcccggaccttgcatatgcgggagctttagtgcac 39203658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 45786275 - 45786227
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||| |||| |||||||||||||||    
T  45786275 atggtgggaccccttcccggaccctgcgaatgctggagctttagtgcac 45786227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52926280 - 52926232
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||  ||||||| || ||||||||||||||||||||| ||||    
T  52926280 atggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcac 52926232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 53996626 - 53996578
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||  || ||||||||| ||||||||||||||||    
T  53996626 atggtgggaccccttccctgacactgcgtatgtgggagctttagtgcac 53996578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 59053 - 59100
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgca 48  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  59053 atggtgggaccccttcccagactctgcgtatgcgggagctttagtgca 59100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 27507985 - 27508032
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||||||| ||||||| || ||||||||||||||||||||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcac 27508032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28817687 - 28817640
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgca 48  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||    
T  28817687 atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 28817640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29877168 - 29877226
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||||| || |||||||||||||||| ||||||||| ||| |||||    
T  29877168 atggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcaccaggctgccc 29877226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12625964 - 12626012
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  12625964 atggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcac 12626012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20284130 - 20284082
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||| ||||||||||    
T  20284130 atggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcac 20284082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21070758 - 21070710
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||||||||| ||||||||||    
T  21070758 atggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcac 21070710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35261753 - 35261801
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||| | || ||||||||||||||||||||||||||    
T  35261753 atggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcac 35261801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36720870 - 36720918
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||||||||||| |||||||||||||    
T  36720870 atggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcac 36720918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39461055 - 39461007
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||| |||| ||||||| || ||||||||||||||||||||||||||    
T  39461055 atggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcac 39461007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44530223 - 44530271
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||| | || ||||||||||||||||||||||||||    
T  44530223 atggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcac 44530271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13160775 - 13160821
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgc 47  Q
    ||||||||||| ||||||| || |||||||||||||||||| |||||    
T  13160775 atggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgc 13160821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7136588 - 7136540
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || | || |||||||||||||||||||||    
T  7136588 atggtgggaccccttcccggaccccgcatatgcgggagctttagtgcac 7136540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8897825 - 8897777
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| ||||||||||||||| |||||    
T  8897825 atggtgggaccccttcccggaccctgcatatgcgggagctttactgcac 8897777  T

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Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12670311 - 12670263
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  12670311 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 12670263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26102591 - 26102639
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  26102591 atggtgggaccccttcccggaccctgcttatgcgggagctctagtgcac 26102639  T

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Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 27468141 - 27468105
Alignment:
Q  13 cttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||| || ||||||||||||||||||||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcac 27468105  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28407477 - 28407525
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || || ||||||||||||||||| |||||    
T  28407477 atggtgggaccccttcccggaccctacgtatgcgggagctttactgcac 28407525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30454158 - 30454110
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  30454158 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 30454110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35107372 - 35107324
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||| |||||||| |||||||||||||    
T  35107372 atggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcac 35107324  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45071338 - 45071386
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| ||  ||||||||||||||||| |||||||    
T  45071338 atggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcac 45071386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18512514 - 18512456
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||||| || ||||||||||||||||||| ||||||| || |||||    
T  18512514 atggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcactgggttgccc 18512456  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21139809 - 21139759
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcacta 51  Q
    ||||||||||| ||||||| |||||| |||||||| |||||||||||||||    
T  21139809 atggtgggaccccttcccgaactctgtgtatgcggaagctttagtgcacta 21139759  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 45018983 - 45018926
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    |||||| ||| ||||||| || |||||||||||||||||||||||||| ||| |||||    
T  45018983 tggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccc 45018926  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2541080 - 2541032
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| |||||||  | ||||||||||||||||||||||||||    
T  2541080 atggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcac 2541032  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7879712 - 7879760
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||||||||||||||||| |||||||    
T  7879712 atggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcac 7879760  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35334877 - 35334829
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||||||||| |||||||||||||||    
T  35334877 atggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 35334829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 38262253 - 38262209
Alignment:
Q  5 tgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||| ||||||| || ||||||||||||||||||||||||||    
T  38262253 tgggaccccttcccgaacactgcgtatgcgggagctttagtgcac 38262209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 18747562 - 18747609
Alignment:
Q  2 tggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    |||||||||| ||||| | || ||||||||||||||||||||||||||    
T  18747562 tggtgggaccccttcctgaaccctgcgtatgcgggagctttagtgcac 18747609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10693134 - 10693076
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgccc 59  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||| || |||||    
T  10693134 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggttgccc 10693076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27889377 - 27889336
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagcttt 42  Q
    ||||||||||| ||||||| || |||||||||||||||||||    
T  27889377 atggtgggaccccttcccggaccctgcgtatgcgggagcttt 27889336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43557548 - 43557589
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagcttt 42  Q
    ||||||||||| | ||||| ||||||||||||||||||||||    
T  43557548 atggtgggaccccctcccggactctgcgtatgcgggagcttt 43557589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21172070 - 21172022
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  21172070 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 21172022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21566510 - 21566558
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||| ||||| ||||||| || |||| |||||||||||||||||||||    
T  21566510 atggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcac 21566558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 23231635 - 23231679
Alignment:
Q  5 tgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||| ||||||| || |||||||||||| |||||||||||||    
T  23231635 tgggaccccttcccgaaccctgcgtatgcggcagctttagtgcac 23231679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32758333 - 32758381
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  32758333 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 32758381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34626269 - 34626225
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagt 45  Q
    ||||||||| | ||||||| || ||||||||||||||||||||||    
T  34626269 atggtgggatcccttcccggaccctgcgtatgcgggagctttagt 34626225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39123969 - 39124017
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || ||||||||| ||||||||| ||||||    
T  39123969 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 39124017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40463950 - 40463998
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| |||| || || |||||||||||||||||| |||||||    
T  40463950 atggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcac 40463998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42391161 - 42391113
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  42391161 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 42391113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 42495911 - 42495875
Alignment:
Q  13 cttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||| || ||||||||||||||||||||||||||    
T  42495911 cttcccggaccctgcgtatgcgggagctttagtgcac 42495875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42805600 - 42805648
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || | || |||||||||||||||||||||    
T  42805600 atggtgggaccccttcccggaccccgcatatgcgggagctttagtgcac 42805648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48735183 - 48735135
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  48735183 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 48735135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 1644 - 1591
Alignment:
Q  5 tgggaccgcttcccgtactctgcgtatgcgggagctttagtgcactagggtgcc 58  Q
    ||||||| ||||||| || | |||||||||||||||||||||||| ||| ||||    
T  1644 tgggaccccttcccggacccggcgtatgcgggagctttagtgcaccaggttgcc 1591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 3622 - 3666
Alignment:
Q  5 tgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||| ||||||| || |||||||||||| |||||||||||||    
T  3622 tgggaccccttcccgaaccctgcgtatgcggcagctttagtgcac 3666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13085 - 13037
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||  || ||||||||||||| ||||||||||||    
T  13085 atggtgggaccccttcccagaccctgcgtatgcgggggctttagtgcac 13037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24194 - 24146
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  24194 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 24146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30651 - 30699
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  30651 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 30699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48695 - 48647
Alignment:
Q  1 atggtgggaccgcttcccgtactctgcgtatgcgggagctttagtgcac 49  Q
    ||||||||||| ||||||| || |||| |||||||||||| ||||||||    
T  48695 atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcac 48647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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