View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13714_high_17 (Length: 205)

Name: NF13714_high_17
Description: NF13714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13714_high_17
NF13714_high_17
[»] chr6 (31 HSPs)
chr6 (1-192)||(10584768-10584959)
chr6 (1-186)||(13533771-13533956)
chr6 (1-192)||(17202430-17202621)
chr6 (1-187)||(15044725-15044911)
chr6 (1-192)||(3592891-3593082)
chr6 (1-192)||(12597305-12597496)
chr6 (1-192)||(19997663-19997854)
chr6 (1-192)||(2005426-2005617)
chr6 (1-192)||(33645940-33646131)
chr6 (1-192)||(28099637-28099828)
chr6 (1-192)||(2266766-2266965)
chr6 (31-192)||(17594814-17594976)
chr6 (64-192)||(8539598-8539726)
chr6 (63-192)||(25448747-25448876)
chr6 (1-86)||(1405603-1405688)
chr6 (1-96)||(33035527-33035622)
chr6 (143-187)||(2266684-2266728)
chr6 (143-187)||(10584995-10585039)
chr6 (143-187)||(12597534-12597578)
chr6 (143-187)||(15044639-15044683)
chr6 (143-187)||(17202348-17202392)
chr6 (143-187)||(17594733-17594777)
chr6 (143-187)||(19997580-19997624)
chr6 (143-187)||(28099867-28099911)
chr6 (143-187)||(33645858-33645902)
chr6 (143-187)||(2005348-2005392)
chr6 (143-187)||(3589064-3589108)
chr6 (143-187)||(3592087-3592131)
chr6 (143-187)||(3592812-3592856)
chr6 (143-187)||(25448665-25448709)
chr6 (143-180)||(8539523-8539560)
[»] chr3 (43 HSPs)
chr3 (1-192)||(20671247-20671438)
chr3 (1-192)||(26948796-26948987)
chr3 (1-192)||(39146438-39146629)
chr3 (1-192)||(4584474-4584665)
chr3 (1-192)||(31488409-31488600)
chr3 (1-192)||(36076494-36076685)
chr3 (1-192)||(45557924-45558115)
chr3 (3-192)||(24119205-24119394)
chr3 (1-192)||(12264198-12264389)
chr3 (1-192)||(38653967-38654158)
chr3 (1-192)||(43363651-43363842)
chr3 (1-192)||(49478206-49478397)
chr3 (1-192)||(49672560-49672751)
chr3 (1-192)||(54073025-54073216)
chr3 (1-192)||(1941760-1941951)
chr3 (1-192)||(21098302-21098493)
chr3 (1-192)||(34121353-34121544)
chr3 (1-192)||(49506389-49506580)
chr3 (1-192)||(55041623-55041820)
chr3 (1-192)||(3898420-3898611)
chr3 (1-142)||(40014693-40014834)
chr3 (1-127)||(26051342-26051469)
chr3 (119-192)||(26052236-26052309)
chr3 (143-187)||(1941989-1942033)
chr3 (143-187)||(3898338-3898382)
chr3 (143-187)||(12264115-12264159)
chr3 (143-187)||(20671166-20671210)
chr3 (143-187)||(26052348-26052392)
chr3 (143-187)||(26948689-26948733)
chr3 (143-187)||(31488329-31488373)
chr3 (143-187)||(34121271-34121315)
chr3 (143-187)||(38654197-38654241)
chr3 (143-187)||(43363880-43363924)
chr3 (143-187)||(49478124-49478168)
chr3 (143-187)||(49672478-49672522)
chr3 (143-187)||(55041857-55041901)
chr3 (144-187)||(21098219-21098262)
chr3 (146-187)||(36076723-36076764)
chr3 (143-187)||(24119126-24119170)
chr3 (143-187)||(39146363-39146407)
chr3 (143-187)||(45558152-45558196)
chr3 (1-67)||(6460208-6460273)
chr3 (143-175)||(4584703-4584735)
[»] chr2 (32 HSPs)
chr2 (1-192)||(36279494-36279685)
chr2 (1-192)||(31424007-31424198)
chr2 (1-192)||(8700259-8700450)
chr2 (1-192)||(19596403-19596594)
chr2 (1-192)||(26231299-26231490)
chr2 (1-187)||(34007749-34007935)
chr2 (1-192)||(999271-999462)
chr2 (1-192)||(18351549-18351740)
chr2 (1-192)||(41663235-41663426)
chr2 (1-192)||(41664508-41664699)
chr2 (2-192)||(16214822-16215012)
chr2 (1-192)||(42055197-42055386)
chr2 (1-192)||(6120550-6120741)
chr2 (1-187)||(20544828-20545014)
chr2 (1-192)||(44902080-44902270)
chr2 (1-192)||(42441958-42442153)
chr2 (1-127)||(692242-692368)
chr2 (1-114)||(27944836-27944949)
chr2 (142-187)||(19596632-19596677)
chr2 (143-187)||(6120467-6120511)
chr2 (143-187)||(16214741-16214785)
chr2 (143-187)||(18351467-18351511)
chr2 (143-187)||(26231526-26231570)
chr2 (143-187)||(31423924-31423968)
chr2 (143-187)||(34007979-34008023)
chr2 (143-187)||(41663152-41663196)
chr2 (143-187)||(42441876-42441920)
chr2 (143-187)||(999499-999543)
chr2 (143-187)||(36279722-36279766)
chr2 (143-187)||(41664426-41664470)
chr2 (143-187)||(44901998-44902042)
chr2 (143-187)||(8700180-8700224)
[»] chr5 (45 HSPs)
chr5 (3-192)||(6940545-6940734)
chr5 (1-192)||(27647928-27648119)
chr5 (1-192)||(5479194-5479385)
chr5 (5-192)||(1395987-1396174)
chr5 (1-192)||(20655089-20655280)
chr5 (1-192)||(29275622-29275813)
chr5 (1-192)||(10729482-10729673)
chr5 (1-192)||(17373204-17373395)
chr5 (1-192)||(20874686-20874877)
chr5 (1-192)||(34107378-34107569)
chr5 (1-192)||(34110650-34110841)
chr5 (1-192)||(38246905-38247096)
chr5 (1-192)||(33375760-33375953)
chr5 (3-192)||(24223206-24223395)
chr5 (16-192)||(1394541-1394717)
chr5 (1-192)||(16526346-16526537)
chr5 (1-192)||(25099276-25099467)
chr5 (1-192)||(25158366-25158557)
chr5 (1-192)||(33570347-33570538)
chr5 (1-192)||(2398982-2399171)
chr5 (10-192)||(14141156-14141338)
chr5 (20-187)||(17913744-17913911)
chr5 (1-96)||(40177135-40177230)
chr5 (143-187)||(1395907-1395951)
chr5 (143-187)||(2399209-2399253)
chr5 (143-187)||(5479115-5479159)
chr5 (143-187)||(6940767-6940811)
chr5 (143-187)||(10729711-10729755)
chr5 (143-187)||(14141376-14141420)
chr5 (143-187)||(16526576-16526620)
chr5 (143-187)||(17373433-17373477)
chr5 (143-187)||(20874604-20874648)
chr5 (143-187)||(24223433-24223477)
chr5 (143-187)||(27647845-27647889)
chr5 (143-187)||(33570577-33570621)
chr5 (143-187)||(34107607-34107651)
chr5 (143-187)||(34110566-34110610)
chr5 (143-187)||(38247134-38247178)
chr5 (143-187)||(40177033-40177077)
chr5 (143-187)||(1394749-1394793)
chr5 (143-187)||(25158593-25158637)
chr5 (143-187)||(33375680-33375724)
chr5 (143-187)||(17913658-17913702)
chr5 (143-187)||(20655313-20655357)
chr5 (147-187)||(29275540-29275580)
[»] chr8 (54 HSPs)
chr8 (1-192)||(11725188-11725379)
chr8 (1-192)||(18841902-18842093)
chr8 (1-192)||(24408874-24409065)
chr8 (1-192)||(28274254-28274445)
chr8 (1-192)||(39257441-39257632)
chr8 (1-186)||(28582859-28583044)
chr8 (1-192)||(40026798-40026989)
chr8 (1-192)||(18568863-18569054)
chr8 (1-192)||(19412829-19413021)
chr8 (9-192)||(19240661-19240844)
chr8 (9-192)||(19313845-19314028)
chr8 (1-182)||(35122362-35122543)
chr8 (1-192)||(15961130-15961321)
chr8 (1-192)||(18997698-18997889)
chr8 (1-192)||(30473924-30474115)
chr8 (1-192)||(44832226-44832417)
chr8 (1-187)||(18210664-18210850)
chr8 (1-192)||(995855-996046)
chr8 (1-192)||(6299060-6299251)
chr8 (1-192)||(10477935-10478126)
chr8 (1-192)||(18175379-18175570)
chr8 (1-192)||(32110901-32111092)
chr8 (1-192)||(44836907-44837098)
chr8 (1-192)||(11142459-11142656)
chr8 (13-192)||(24004779-24004958)
chr8 (1-155)||(39997726-39997880)
chr8 (72-192)||(23353688-23353808)
chr8 (103-192)||(25875441-25875530)
chr8 (130-192)||(18481929-18481991)
chr8 (143-192)||(39997660-39997709)
chr8 (143-187)||(6299289-6299333)
chr8 (143-187)||(10477853-10477897)
chr8 (143-187)||(11142381-11142425)
chr8 (143-187)||(11725106-11725150)
chr8 (143-187)||(18175297-18175341)
chr8 (143-187)||(18997616-18997660)
chr8 (143-187)||(19240580-19240624)
chr8 (143-187)||(19313764-19313808)
chr8 (143-187)||(19412752-19412796)
chr8 (143-187)||(23353845-23353889)
chr8 (143-187)||(24408795-24408839)
chr8 (143-187)||(30474152-30474196)
chr8 (143-187)||(32111130-32111174)
chr8 (143-187)||(35122584-35122628)
chr8 (143-187)||(39997580-39997624)
chr8 (143-187)||(44832456-44832500)
chr8 (143-187)||(44836824-44836868)
chr8 (143-186)||(18210892-18210935)
chr8 (143-187)||(996084-996128)
chr8 (143-187)||(18841829-18841873)
chr8 (143-187)||(25875566-25875610)
chr8 (143-187)||(28582777-28582821)
chr8 (143-183)||(39257362-39257402)
chr8 (141-187)||(18568817-18568863)
[»] chr7 (38 HSPs)
chr7 (1-192)||(21669979-21670170)
chr7 (1-192)||(43933584-43933775)
chr7 (2-192)||(21656626-21656816)
chr7 (1-192)||(15109705-15109896)
chr7 (1-192)||(16376585-16376776)
chr7 (1-192)||(24924077-24924268)
chr7 (1-192)||(27903457-27903648)
chr7 (1-192)||(40968889-40969080)
chr7 (1-192)||(13786168-13786359)
chr7 (1-192)||(21753532-21753723)
chr7 (1-192)||(21804612-21804803)
chr7 (1-192)||(38163379-38163570)
chr7 (1-192)||(42242194-42242385)
chr7 (1-187)||(3840681-3840867)
chr7 (4-192)||(27138571-27138759)
chr7 (1-192)||(33916987-33917178)
chr7 (1-192)||(21341821-21342012)
chr7 (1-192)||(17178277-17178469)
chr7 (1-192)||(31373454-31373645)
chr7 (1-155)||(39030292-39030446)
chr7 (144-192)||(31096698-31096746)
chr7 (143-187)||(3840911-3840955)
chr7 (143-187)||(16376811-16376855)
chr7 (143-187)||(21341737-21341781)
chr7 (143-187)||(21656547-21656591)
chr7 (143-187)||(21669895-21669939)
chr7 (143-187)||(21804841-21804885)
chr7 (143-187)||(27138797-27138841)
chr7 (143-187)||(31373370-31373414)
chr7 (143-187)||(33917216-33917260)
chr7 (143-187)||(42242423-42242467)
chr7 (144-187)||(17178508-17178551)
chr7 (143-184)||(24924001-24924042)
chr7 (146-187)||(43933815-43933856)
chr7 (143-187)||(15109929-15109973)
chr7 (143-187)||(21753759-21753803)
chr7 (143-187)||(27903685-27903729)
chr7 (143-187)||(31096615-31096659)
[»] chr4 (44 HSPs)
chr4 (1-186)||(16904992-16905177)
chr4 (1-186)||(35760585-35760770)
chr4 (1-192)||(31628527-31628718)
chr4 (1-192)||(46256032-46256223)
chr4 (1-192)||(39058397-39058588)
chr4 (3-192)||(45977032-45977221)
chr4 (12-192)||(48118582-48118762)
chr4 (1-192)||(44376119-44376310)
chr4 (10-192)||(45782478-45782660)
chr4 (1-192)||(16917928-16918119)
chr4 (1-192)||(33139511-33139702)
chr4 (1-192)||(52434622-52434813)
chr4 (1-192)||(30824962-30825153)
chr4 (1-192)||(37590844-37591035)
chr4 (10-192)||(52098239-52098422)
chr4 (1-192)||(53143302-53143493)
chr4 (1-192)||(54624955-54625139)
chr4 (1-192)||(31966009-31966200)
chr4 (1-192)||(37651664-37651855)
chr4 (1-192)||(41387124-41387315)
chr4 (1-192)||(47142840-47143031)
chr4 (1-192)||(12090499-12090691)
chr4 (26-187)||(50229771-50229933)
chr4 (143-187)||(12090729-12090773)
chr4 (143-187)||(16905217-16905261)
chr4 (143-187)||(16918157-16918201)
chr4 (143-187)||(30825191-30825235)
chr4 (143-187)||(31966238-31966282)
chr4 (143-187)||(39058621-39058665)
chr4 (143-187)||(45977263-45977307)
chr4 (143-187)||(47143069-47143113)
chr4 (143-187)||(48118801-48118845)
chr4 (143-187)||(52098459-52098503)
chr4 (143-187)||(52434540-52434584)
chr4 (143-187)||(53143533-53143577)
chr4 (143-187)||(54624879-54624923)
chr4 (1-55)||(50229712-50229766)
chr4 (143-187)||(41387042-41387086)
chr4 (143-187)||(44376346-44376390)
chr4 (147-187)||(50229979-50230019)
chr4 (141-187)||(31628718-31628764)
chr4 (143-181)||(45782696-45782734)
chr4 (143-187)||(37591069-37591113)
chr4 (143-187)||(46255954-46255998)
[»] chr1 (38 HSPs)
chr1 (1-192)||(18706549-18706739)
chr1 (1-192)||(23482747-23482938)
chr1 (1-192)||(39727978-39728169)
chr1 (3-192)||(7333942-7334131)
chr1 (1-192)||(4266379-4266570)
chr1 (1-192)||(34888726-34888917)
chr1 (1-192)||(35614065-35614256)
chr1 (1-192)||(38444629-38444820)
chr1 (1-192)||(38913787-38913978)
chr1 (1-192)||(50151058-50151249)
chr1 (1-187)||(35614819-35615004)
chr1 (1-192)||(9216029-9216220)
chr1 (1-187)||(52687154-52687339)
chr1 (16-192)||(2951421-2951597)
chr1 (4-182)||(19764593-19764771)
chr1 (1-173)||(1231813-1231985)
chr1 (1-192)||(18855273-18855463)
chr1 (52-192)||(19768462-19768602)
chr1 (56-192)||(2590333-2590468)
chr1 (1-115)||(31018240-31018354)
chr1 (1-115)||(50326076-50326190)
chr1 (1-75)||(5061338-5061412)
chr1 (143-187)||(1231725-1231769)
chr1 (143-187)||(2951635-2951679)
chr1 (143-187)||(4266297-4266341)
chr1 (143-187)||(18706772-18706816)
chr1 (143-187)||(19764813-19764857)
chr1 (143-187)||(19768382-19768426)
chr1 (143-187)||(23482971-23483015)
chr1 (143-187)||(35614734-35614778)
chr1 (143-187)||(38914016-38914060)
chr1 (143-187)||(52036309-52036353)
chr1 (147-187)||(7333863-7333903)
chr1 (143-187)||(35613984-35614028)
chr1 (143-187)||(38444549-38444593)
chr1 (143-187)||(52687380-52687424)
chr1 (1-55)||(29942153-29942207)
chr1 (143-187)||(39727896-39727940)
[»] scaffold0173 (1 HSPs)
scaffold0173 (1-192)||(19345-19536)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-192)||(149090-149281)
scaffold0022 (143-187)||(149317-149361)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-192)||(46272-46463)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-132)||(6101-6232)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-132)||(6111-6242)
[»] scaffold0836 (1 HSPs)
scaffold0836 (1-113)||(5318-5430)


Alignment Details
Target: chr6 (Bit Score: 136; Significance: 4e-71; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 10584768 - 10584959
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  10584768 ttgtagatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 10584867  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    | ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10584868 ctacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 10584959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 13533956 - 13533771
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||| ||||| | |||| ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  13533956 ttgtagatgtagtagataaaaacaaatctcaatgtatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 13533857  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatat 186  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13533856 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatat 13533771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 17202621 - 17202430
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||| | | |||  |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  17202621 ttgtagatgtagtagacaaatacaaatcacaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 17202522  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17202521 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 17202430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 15044911 - 15044725
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||||| || | |||| |||||||||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  15044911 ttgtagatgtagtagacaaaaataaatttcaatgcatatcaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 15044812  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  15044811 ccacacttattcaccttaaaaatattaatttttatcaatcgtgttttacttcattcttttgttaaaattatatgtcaatgttatatt 15044725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 3593082 - 3592891
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| ||||| |||||| ||||||||||| ||||||||| || || ||||| |||||||||||||| | |    
T  3593082 ttgtagatgtagtagacaaaaacaaatctcaatgcatatccaagagaatgaaatatgtgatcccaaatatattcagatgttggaattcgaacctcagaca 3592983  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  3592982 ccacacttattcaccttaaaaatattaatttttatgaatcgtgtgttacttcattcttttgttaaaattatatctcaatgttatattattgg 3592891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 12597305 - 12597496
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  12597305 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 12597404  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12597405 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 12597496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 19997854 - 19997663
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  19997854 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 19997755  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  19997754 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 19997663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 2005617 - 2005426
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||||||| |||||||||||| | |||| |||| |||||||||||| | ||| ||||||||  ||||| ||||| ||||| |||||||||||||| | |    
T  2005617 ttgtagatgcagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcttaaatatatgcagatgttggaattcgaacctcagaca 2005518  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  2005517 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 2005426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 33646131 - 33645940
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||||||||||| | |    
T  33646131 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttccaaatatatgcagatgttggaattcgaacctcagaca 33646032  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  33646031 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 33645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 28099637 - 28099828
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| || |||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||  ||||| |||||||||||||| | |    
T  28099637 ttgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgctgatgttggaattcgaacctcagaca 28099736  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  28099737 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 28099828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 2266965 - 2266766
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  2266965 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 2266866  T
Q  101 ccaca--------ctaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||         || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2266865 ccacgacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 2266766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 17594976 - 17594814
Alignment:
Q  31 aatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaattcaccttaaaaatattat-t 129  Q
    |||| |||||||||| | ||||||||||||||||||||| ||| | |||||  ||||| ||| ||| | |||||||| |||||||||||||||||||  |    
T  17594976 aatgcatatcaaagaaaatgaaatatgtggtcccaaatatatggagatgttgaaattcaaacttcagacaccacacttattcaccttaaaaatattaaat 17594877  T
Q  130 ttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17594876 ttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 17594814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 8539726 - 8539598
Alignment:
Q  64 caaatacatgcacatgttagaattcgaacctcatataccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgtt 163  Q
    |||||| ||||| ||||| |||||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  8539726 caaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgtt 8539627  T
Q  164 aaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||||||||||||||| ||||    
T  8539626 aaaattatatgtcaatgttatattattgg 8539598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 25448876 - 25448747
Alignment:
Q  63 ccaaatacatgcacatgttagaattcgaacctcatataccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgt 162  Q
    ||||||| ||| | ||||| ||||||||| |||| | ||||| || |||||||  ||| |||||| |||||||||||||| |||||||||||| ||||||    
T  25448876 ccaaatatatgtagatgttggaattcgaaactcagacaccacgcttattcaccaaaaatatattaatttttatcaatcgtgtgttacttcatttttttgt 25448777  T
Q  163 taaaattatatgtcaatgttatattcttgg 192  Q
    ||||||||||||||||| ||||||| ||||    
T  25448776 taaaattatatgtcaatattatattattgg 25448747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1405603 - 1405688
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaat 86  Q
    |||||||||||||||| ||||| | |||| ||||||||| ||||||| ||||||||||| ||||||||| ||||| ||||| ||||    
T  1405603 ttgtagatgtagtagataaaaacaaatctcaatgtatattaaagagaatgaaatatgtgatcccaaatatatgcagatgttggaat 1405688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33035622 - 33035527
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctca 96  Q
    |||||||||||||||||||||| | |||| |||| || ||||||||| | ||| |||||||| |||||| ||||| ||| | ||||||||| ||||    
T  33035622 ttgtagatgtagtagacaaaaacaaatctcaatgcatgtcaaagagaataaaacatgtggtctcaaatatatgcagatgctggaattcgaatctca 33035527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 2266728 - 2266684
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  2266728 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 2266684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 10584995 - 10585039
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  10584995 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 10585039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 12597534 - 12597578
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  12597534 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 12597578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 15044683 - 15044639
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  15044683 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 15044639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 17202392 - 17202348
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  17202392 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 17202348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 17594777 - 17594733
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  17594777 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 17594733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 19997624 - 19997580
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  19997624 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 19997580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 28099867 - 28099911
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  28099867 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 28099911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 33645902 - 33645858
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  33645902 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 33645858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 2005392 - 2005348
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  2005392 atgttacttcattattttgtaaaaattatatgttaatgttatatt 2005348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 3589108 - 3589064
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||    
T  3589108 atgttacttcactcttttgtaaaaattatatgttaatgttatatt 3589064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 3592131 - 3592087
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  3592131 atgttatttcattcttttgtaaaaattatatgttaatgttatatt 3592087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 3592856 - 3592812
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||    
T  3592856 atgttacttcattcttttgtaaaaattatatgttaatgttgtatt 3592812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 25448709 - 25448665
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||| |||||||||| |||||||||||| |||||||||||    
T  25448709 atgttactttattcttttgtaaaaattatatgttaatgttatatt 25448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 8539560 - 8539523
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatg 180  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  8539560 atgttacttcattcttttgtaaaaattatatgttaatg 8539523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 20671438 - 20671247
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  20671438 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 20671339  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20671338 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 20671247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 26948987 - 26948796
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  26948987 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 26948888  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26948887 ccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 26948796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 39146629 - 39146438
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  39146629 ttgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 39146530  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  39146529 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 39146438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 4584474 - 4584665
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| ||||| |||||||| | |    
T  4584474 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaatttgaacctcagaca 4584573  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  4584574 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 4584665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 31488600 - 31488409
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| |||||||||| |||||||||| ||||| ||||| |||||||||||||| | |    
T  31488600 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgttgtcccaaatatatgcagatgttggaattcgaacctcagaca 31488501  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  31488500 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactttattcttttgttaaaattatatgtcaatgttatattattgg 31488409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 36076494 - 36076685
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||| ||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| ||| | |    
T  36076494 ttgtagatgtagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacttcagaca 36076593  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36076594 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 36076685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 45557924 - 45558115
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| |||||||||||||||||| || ||||| |||||  ||||||||||||| | |    
T  45557924 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaagtatatgcagatgttgaaattcgaacctcagaca 45558023  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  45558024 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtattacttcattcttttgttaaaattatatgtcaatattatattattgg 45558115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 24119394 - 24119205
Alignment:
Q  3 gtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatacc 102  Q
    |||||||||||||||||||| | |||| |||| |||| ||||| | |||||||| |||||||||||| ||||| ||||| |||||| ||||||| | |||    
T  24119394 gtagatgtagtagacaaaaacaaatctcaatgcatattaaagataatgaaatatatggtcccaaatatatgcagatgttggaattcaaacctcagacacc 24119295  T
Q  103 acactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24119294 acacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 24119205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 12264389 - 12264198
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  12264389 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 12264290  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12264289 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 12264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 38653967 - 38654158
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  38653967 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 38654066  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38654067 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 38654158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 43363651 - 43363842
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  43363651 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 43363750  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  43363751 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 43363842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 49478397 - 49478206
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||||| |||||||| ||||| | |||| |||  |||||||||| | ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  49478397 ttgtagacgtagtagataaaaacaaatctcaatacatatcaaagataatgaaatatgtggtcccaaatatatgcaaatgttggaattcgaacctcagaca 49478298  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  49478297 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttattaaaattatatgtcaatgttatattattgg 49478206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 49672751 - 49672560
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  49672751 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 49672652  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  49672651 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 49672560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 54073216 - 54073025
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  54073216 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 54073117  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  54073116 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 54073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 1941760 - 1941951
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  1941760 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 1941859  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
     ||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1941860 tcacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 1941951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 21098493 - 21098302
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| || |||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  21098493 ttgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 21098394  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  21098393 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 21098302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 34121544 - 34121353
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||| ||||||||||||| ||||| ||||| |||||||||||||| | |    
T  34121544 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatacgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 34121445  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  34121444 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 34121353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 49506389 - 49506580
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  49506389 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 49506488  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  49506489 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtacttcattcttttgttaaaattatatgtcaatattatattattgg 49506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 55041623 - 55041820
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||||||||||| | |    
T  55041623 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttccaaatatatgcagatgtttgaattcgaacctcagaca 55041722  T
Q  101 ccacactaattcaccttaaaaatatta------ttttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||||||||||||||       |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  55041723 ccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtgttacttcactcttttgttaaaattatatgtcaatgttatattattgg 55041820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 3898611 - 3898420
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||| ||||||| ||||||||||||||||||||| ||||| ||||| ||||| |||||||| | |    
T  3898611 ttgtagatatagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaatttgaacctcagaca 3898512  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  3898511 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 3898420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 40014693 - 40014834
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| || || ||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  40014693 ttgtagatataataaacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 40014792  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgt 142  Q
    |||| || |||||||  |||||||||| ||||||||||||||    
T  40014793 ccacgcttattcaccaaaaaaatattaatttttatcaatcgt 40014834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26051342 - 26051469
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggt-cccaaatacatgcacatgttagaattcgaacctcatat 99  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||| |||||||| ||||  | ||| |||||||||||||| |     
T  26051342 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccccaaatatatgctgaggttggaattcgaacctcagac 26051441  T
Q  100 accacactaattcaccttaaaaatatta 127  Q
    ||||| || |||||||||||||||||||    
T  26051442 accacgcttattcaccttaaaaatatta 26051469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 26052236 - 26052309
Alignment:
Q  119 aaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26052236 aaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 26052309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 1941989 - 1942033
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  1941989 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 1942033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 3898382 - 3898338
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  3898382 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 3898338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 12264159 - 12264115
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  12264159 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 12264115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 20671210 - 20671166
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  20671210 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 20671166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 26052348 - 26052392
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  26052348 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 26052392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 26948733 - 26948689
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  26948733 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 26948689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 31488373 - 31488329
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  31488373 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 31488329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 34121315 - 34121271
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  34121315 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 34121271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 38654197 - 38654241
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  38654197 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 38654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 43363880 - 43363924
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  43363880 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 43363924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 49478168 - 49478124
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  49478168 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 49478124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 49672522 - 49672478
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  49672522 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 49672478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 55041857 - 55041901
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  55041857 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 55041901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 21098262 - 21098219
Alignment:
Q  144 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  21098262 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 21098219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 36076723 - 36076764
Alignment:
Q  146 ttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  36076723 ttacttcattcttttgtaaaaattatatgttaatgttatatt 36076764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 24119170 - 24119126
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| || ||||||||    
T  24119170 atgttacttcattcttttgtaaaaattatatgttaaagttatatt 24119126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 39146407 - 39146363
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  39146407 atgttacttcattattttgtaaaaattatatgttaatgttatatt 39146363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 45558152 - 45558196
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  45558152 atgttacttcatttttttgtaaaaattatatgttaatgttatatt 45558196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6460208 - 6460273
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaa 67  Q
    |||||||||||||||||||||| | |||| |||  |||||||| ||| | |||||||||||||||||    
T  6460208 ttgtagatgtagtagacaaaaacaaatctcaatacatatcaaa-agaataaaatatgtggtcccaaa 6460273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 4584703 - 4584735
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgt 175  Q
    |||||||||||||||||||| ||||||||||||    
T  4584703 atgttacttcattcttttgtaaaaattatatgt 4584735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 36279494 - 36279685
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | || | ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||| |||| |||    
T  36279494 ttgtagatgtagtagacaaaaacaaatatcaatgtatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaatctcagata 36279593  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36279594 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 36279685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 31424198 - 31424007
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||| | ||||| |||||||||||||||| |    
T  31424198 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgtagatgttggaattcgaacctcataca 31424099  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31424098 ccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 31424007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 8700450 - 8700259
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | || | |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||| |    
T  8700450 ttgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcataca 8700351  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| |  |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8700350 ccacattttttcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 8700259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 19596403 - 19596594
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||| ||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  19596403 ttgtagatgtagtagacaaaaacaaatctcaatgcatattaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 19596502  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19596503 ccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgttaaaattatatgtcaatgttaaattattgg 19596594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 26231299 - 26231490
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | || | |||| |||||||||||| |||||||||||||| |||||| || || ||||| |||||||||||||| | |    
T  26231299 ttgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaatgaaatatgtggtctcaaatatattcagatgttggaattcgaacctcagaca 26231398  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26231399 ccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 26231490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 34007749 - 34007935
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| |||||||||| |||||||||| ||||  ||||| |||||||||||||| | |    
T  34007749 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtagtcccaaatatatgccgatgttggaattcgaacctcagaca 34007848  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||| || |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34007849 ccacacttatccaccttaaaaatattaatttttataaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 34007935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 999271 - 999462
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||| ||||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||| | ||||| |||||||||||||| | |    
T  999271 ttgtagatgtagtagataaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgtagatgttggaattcgaacctcagaca 999370  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  999371 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 999462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 18351740 - 18351549
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  18351740 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaaca 18351641  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18351640 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 18351549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 41663426 - 41663235
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  41663426 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 41663327  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  41663326 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 41663235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 41664699 - 41664508
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  41664699 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 41664600  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  41664599 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 41664508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 2 - 192
Target Start/End: Complemental strand, 16215012 - 16214822
Alignment:
Q  2 tgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatac 101  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||||||| ||||| ||||| ||||  |||||||||||||  | ||    
T  16215012 tgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtccaaaatatatgcaaatgtaggaattcgaacctctaacac 16214913  T
Q  102 cacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  16214912 cacacttattcaccttaaaaatattaatttttattaatcgtgtgttacttcattcttttgttaaaattatatgtcagtgttacattattgg 16214822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 42055386 - 42055197
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||| ||| ||||||||| ||||| ||||| |||||||||||||| | |    
T  42055386 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaataggtgatcccaaatatatgcagatgttggaattcgaacctcagaca 42055287  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||| ||||    
T  42055286 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaagat--tatgtcaatgttatattattgg 42055197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 6120741 - 6120550
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  6120741 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 6120642  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  6120641 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaactatatgtcaatattatattattgg 6120550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 20545014 - 20544828
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| | ||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| | | |    
T  20545014 ttgtagatatggtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttagaattcgaacctaaaaca 20544915  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||| || |||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  20544914 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtacttcattcttttgttaaaattatatgtcaatattatatt 20544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 44902270 - 44902080
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  44902270 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 44902171  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || ||||||   ||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44902170 ccacgcttattcacaaaaaaaata-taatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 44902080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 42442153 - 42441958
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaa------cct 94  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||      |||    
T  42442153 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaattcgaacct 42442054  T
Q  95 catataccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    || | ||||| || |||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  42442053 cagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgt--gttacttcattcttttgttaaaattatatgtcaatattatattattgg 42441958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 692242 - 692368
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||| |||||||||||||||| | |||| |||| |||||||||||| |||||||| |||||||||||| ||||| ||||| |||||||||||||| | |    
T  692242 ttgtaaatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatatggtcccaaatatatgcagatgttggaattcgaacctcagaca 692341  T
Q  101 ccacactaattcaccttaaaaatatta 127  Q
    ||||||| |||||||||||||||||||    
T  692342 ccacacttattcaccttaaaaatatta 692368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 27944836 - 27944949
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  27944836 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 27944935  T
Q  101 ccacactaattcac 114  Q
    |||| || ||||||    
T  27944936 ccacgcttattcac 27944949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 19596632 - 19596677
Alignment:
Q  142 tatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  19596632 tatgttacttcattcttttgttaaaattatatgttaatgttatatt 19596677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 6120511 - 6120467
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  6120511 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 6120467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 16214785 - 16214741
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  16214785 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 16214741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 18351511 - 18351467
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  18351511 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 18351467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 26231526 - 26231570
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  26231526 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 26231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 31423968 - 31423924
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  31423968 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 31423924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 34007979 - 34008023
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  34007979 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 34008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 41663196 - 41663152
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  41663196 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 41663152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 42441920 - 42441876
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  42441920 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 42441876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 999499 - 999543
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  999499 atgttacttcattattttgtaaaaattatatgttaatgttatatt 999543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 36279722 - 36279766
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  36279722 atgttatttcattcttttgtaaaaattatatgttaatgttatatt 36279766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 41664470 - 41664426
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||| | |||||||||||| |||||||||||    
T  41664470 atgttacttcattcttttataaaaattatatgttaatgttatatt 41664426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 44902042 - 44901998
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  44902042 atgttaattcattcttttgtaaaaattatatgttaatgttatatt 44901998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 8700224 - 8700180
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| ||||||| |||| |||||||||||    
T  8700224 atgttacttcattattttgtaaaaattacatgttaatgttatatt 8700180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 6e-70; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 6940545 - 6940734
Alignment:
Q  3 gtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatacc 102  Q
    |||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||    
T  6940545 gtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacacc 6940644  T
Q  103 acactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  6940645 acacttattcacctgaaaaatattaatttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaacgttatattattgg 6940734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 27648119 - 27647928
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| || || ||||| |||||||||||||| | |    
T  27648119 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatacagatgttggaattcgaacctcagaca 27648020  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27648019 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattgttgg 27647928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 5479385 - 5479194
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||| ||||||||| ||| | ||||| |||||||||||||| | |    
T  5479385 ttgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtgatcccaaatatatgtagatgttggaattcgaacctcagaca 5479286  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    | ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5479285 ctacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 5479194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 1396174 - 1395987
Alignment:
Q  5 agatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccac 104  Q
    |||||||| ||||||||| | |||| |||| |||||||||||| |||||||||||||||||||||  |||| ||||| |||||||||||||| | |||||    
T  1396174 agatgtagcagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatctgcagatgttggaattcgaacctcagacaccac 1396075  T
Q  105 actaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1396074 acttattcaccttaaaaatattaatttttatcagtcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 1395987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 20655089 - 20655280
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  20655089 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 20655188  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  20655189 ccacacttattcaccttaaaaatattaatttttatcaattgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 20655280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 29275813 - 29275622
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||||||||| |||||||||| | || | |||| |||||||||||| ||||| ||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  29275813 ttgtagatgtaatagacaaaaacaaatttcaatgcatatcaaagagaatgaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 29275714  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29275713 ccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 29275622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 10729482 - 10729673
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| ||||| |||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  10729482 ttgtagatatagtagacaaaaacaaatctcaatgcatatccaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 10729581  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  10729582 ccacgcttattcaccaaaaaaatattattttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 10729673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 17373204 - 17373395
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  17373204 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 17373303  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  17373304 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 17373395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 20874877 - 20874686
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  20874877 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 20874778  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  20874777 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 20874686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 34107378 - 34107569
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  34107378 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 34107477  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  34107478 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 34107569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 34110841 - 34110650
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  34110841 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 34110742  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  34110741 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 34110650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 38246905 - 38247096
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  38246905 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 38247004  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38247005 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 38247096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 33375953 - 33375760
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggt--cccaaatacatgcacatgttagaattcgaacctcata 98  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| |||||||  |||||||| ||||| ||||| |||||||||||||| |    
T  33375953 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtgtcccaaatatatgcagatgttggaattcgaacctcaga 33375854  T
Q  99 taccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
     |||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  33375853 caccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 33375760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 24223206 - 24223395
Alignment:
Q  3 gtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatacc 102  Q
    |||||||||||||||||||| | |||| |||| |||| ||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |||    
T  24223206 gtagatgtagtagacaaaaacaaatctcaatgcatatgaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacacc 24223305  T
Q  103 acactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| ||||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  24223306 acacttattcaccttaaaaatattactctttaccaatcgtgtgttacttcattcttttgttaaaagtatatgtcaatgtgatattattgg 24223395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 1394541 - 1394717
Alignment:
Q  16 acaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaattcacc 115  Q
    ||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | ||||||||  ||||||    
T  1394541 acaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacttgttcacc 1394640  T
Q  116 ttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  1394641 ttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaatttatatgtcaatgttatattattgg 1394717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 16526346 - 16526537
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  16526346 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 16526445  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  16526446 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcgttcttttgttaaaattatatgtcaatattatattattgg 16526537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 25099276 - 25099467
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| |||||||| |||||| ||||| ||||| ||||||||||||||   |    
T  25099276 ttgtagatgtagtagacaaaaacaaatctgaatgcatatcaaagagaataaaacatgtggtcacaaatatatgcagatgttggaattcgaacctcaggca 25099375  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||| |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  25099376 ccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 25099467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 25158366 - 25158557
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| |||||||| |||||| ||||| ||||| ||||||||||||||   |    
T  25158366 ttgtagatgtagtagacaaaaacaaatctgaatgcatatcaaagagaataaaacatgtggtcacaaatatatgcagatgttggaattcgaacctcaggca 25158465  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||| |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  25158466 ccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 25158557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 33570347 - 33570538
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| ||| |||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  33570347 ttgtagatatagtagacaaaaacaaatctcaatgcataccaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 33570446  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  33570447 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 33570538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 2398982 - 2399171
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  2398982 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 2399081  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2399082 ccacgcttattcaccaaaaaaatattaatttttatcaatcg--tgttacttcattcttttgttaaaattatatgtcaatattatattattgg 2399171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 14141156 - 14141338
Alignment:
Q  10 tagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaa 109  Q
    ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | ||||| || |    
T  14141156 tagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgctta 14141255  T
Q  110 ttcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  14141256 ttcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgccaatattatattattgg 14141338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 17913911 - 17913744
Alignment:
Q  20 aaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaattcaccttaa 119  Q
    ||||| |||| |||| |||||||||||| | ||| ||||||||||||||| ||| | ||||| |||||||||||||| |||||||||| |||||||||||    
T  17913911 aaataaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgtagatgttggaattcgaacctcaaataccacacttattcaccttaa 17913812  T
Q  120 aaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  17913811 aaatattaatctttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatatt 17913744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40177230 - 40177135
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctca 96  Q
    |||||||| ||||||||||||| | |||| |||| |||| ||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  40177230 ttgtagatatagtagacaaaaacaaatctcaatgcatataaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctca 40177135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 1395951 - 1395907
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  1395951 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 1395907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 2399209 - 2399253
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  2399209 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 2399253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 5479159 - 5479115
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  5479159 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 5479115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 6940767 - 6940811
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  6940767 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 6940811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 10729711 - 10729755
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  10729711 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 10729755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 14141376 - 14141420
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  14141376 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 14141420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 16526576 - 16526620
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  16526576 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 16526620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 17373433 - 17373477
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  17373433 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 17373477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 20874648 - 20874604
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  20874648 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 20874604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 24223433 - 24223477
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  24223433 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 24223477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 27647889 - 27647845
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  27647889 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 27647845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 33570577 - 33570621
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  33570577 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 33570621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 34107607 - 34107651
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  34107607 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 34107651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 34110610 - 34110566
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  34110610 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 34110566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 38247134 - 38247178
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  38247134 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 38247178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 40177077 - 40177033
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  40177077 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 40177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 1394749 - 1394793
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||  |||||||||||    
T  1394749 atgttacttcattcttttgtaaaaattatatggtaatgttatatt 1394793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 25158593 - 25158637
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  25158593 atgttacttcattattttgtaaaaattatatgttaatgttatatt 25158637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 33375724 - 33375680
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  33375724 atgttacttcattattttgtaaaaattatatgttaatgttatatt 33375680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 17913702 - 17913658
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| ||||||||| || |||||||||||    
T  17913702 atgttacttcattattttgtaaaaattatacgttaatgttatatt 17913658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 20655313 - 20655357
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||  |||||||||||| |||||||||||    
T  20655313 atgttacttcattattttggaaaaattatatgttaatgttatatt 20655357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 29275580 - 29275540
Alignment:
Q  147 tacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  29275580 tacttcattcttttgtaaaaaatatatgttaatgttatatt 29275540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 9e-69; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 11725379 - 11725188
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| | |    
T  11725379 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcagaca 11725280  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11725279 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 11725188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 18842093 - 18841902
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||||||| ||||| ||||| ||||| ||||||||| |||| | |    
T  18842093 ttgtagatgtagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtccaaaatatatgcagatgttggaattcgaatctcagaca 18841994  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18841993 ccacacttattcaccttaaaaatattaatttttatcaattgtatgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 18841902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 24409065 - 24408874
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||| ||||| | ||||||||| |||||||||| | ||||||||||||||||||||| ||||| ||||| |||||||||| ||||| |    
T  24409065 ttgtagatgtagtagataaaaacaaatcttaatgcatatcaaagataatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacatcataca 24408966  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24408965 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 24408874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 28274254 - 28274445
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||| ||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| | ||| ||||| |||||||||||||||| |    
T  28274254 ttgtagatgtagcagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatacgcagatgttggaattcgaacctcataca 28274353  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28274354 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 28274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 39257632 - 39257441
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| ||||| |||||||| | |    
T  39257632 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaatttgaacctcagaca 39257533  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39257532 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 39257441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 28583044 - 28582859
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||| ||||| | |||| ||||||||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| | |    
T  28583044 ttgtagatgtagtagataaaaacaaatctcaatgtatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcagaca 28582945  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatat 186  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28582944 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatat 28582859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 40026989 - 40026798
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||| | ||||||||||||||||||||| ||||| ||||| ||||| |||||||| | |    
T  40026989 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagataatgaaatatgtggtcccaaatatatgcagatgttggaatttgaacctcagaca 40026890  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40026889 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 40026798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 18569054 - 18568863
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||| ||||||||||| | |||| |||| |||||||||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  18569054 ttgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaaca 18568955  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18568954 ccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 18568863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 19413021 - 19412829
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  19413021 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 19412922  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattc-ttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| | ||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  19412921 ccacagttattcaccttaaaaatattaatttttatccatcgtgtgttacttcattctttttgttaaaattatatgtcaatgttatattattgg 19412829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 19240844 - 19240661
Alignment:
Q  9 gtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacacta 108  Q
    |||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | ||||||||     
T  19240844 gtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacactt 19240745  T
Q  109 attcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19240744 attcacgttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 19240661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 19314028 - 19313845
Alignment:
Q  9 gtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacacta 108  Q
    |||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | ||||||||     
T  19314028 gtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacactt 19313929  T
Q  109 attcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19313928 attcacgttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 19313845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 35122362 - 35122543
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||| ||||| ||||| ||||| ||||||||| |||| | |    
T  35122362 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtccaaaatatatgcagatgttggaattcgaatctcagaca 35122461  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgtt 182  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  35122462 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttattaaaattatatgtcaatgtt 35122543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 15961321 - 15961130
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  15961321 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 15961222  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  15961221 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 15961130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 18997889 - 18997698
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  18997889 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 18997790  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18997789 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 18997698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 30473924 - 30474115
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  30473924 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 30474023  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  30474024 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 30474115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 44832226 - 44832417
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  44832226 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 44832325  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44832326 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 44832417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18210664 - 18210850
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||||| |||| |||| |||||||||||| |||||||||||||| |||||| ||||| ||||| ||||| |||||||| | |    
T  18210664 ttgtagatatagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaatttgaacctcagaca 18210763  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  18210764 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttatttccttcttttgttaaagttatatgtcaatgttatatt 18210850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 995855 - 996046
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  995855 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcatatgttggaattcgaacctcagaca 995954  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  ||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  995955 ccacgcttattcaccaaaaaaatattaacttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 996046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 6299060 - 6299251
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  6299060 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 6299159  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  6299160 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcctttgttaaaattatatgtcaatattatattattgg 6299251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 10478126 - 10477935
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| | |    
T  10478126 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcacaaatatatgcagatgttggaattcgaacctcagaca 10478027  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  10478026 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 10477935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 18175570 - 18175379
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  18175570 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 18175471  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||  |||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18175470 ccacacttattcaccaaaaaaatattaattattatcaaacgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 18175379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 32110901 - 32111092
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||||||||||| | |    
T  32110901 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttccaaatatatgcagatgttggaattcgaacctcagaca 32111000  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  32111001 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 32111092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 44837098 - 44836907
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||||| |||| |||  |||||||||||| | ||||||||||||| ||||| ||||| ||||| |||||||||||||| | |    
T  44837098 ttgtagatgtagtagacaaaaataaatctcaatacatatcaaagagaataaaatatgtggtcctaaatatatgcagatgttggaattcgaacctcagaca 44836999  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  44836998 ccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgttaaaattatatctcaatgttaaattattgg 44836907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 11142656 - 11142459
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||| ||||||||| ||||| ||||| |||||||||||||| | |    
T  11142656 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtgctcccaaatatatgcagatgttggaattcgaacctcagaca 11142557  T
Q  101 ccacactaattcaccttaaaaatatta------ttttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  11142556 ccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcagtgttatattattgg 11142459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 24004779 - 24004958
Alignment:
Q  13 tagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaattc 112  Q
    |||||||||  | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| |||||  ||||||||||||| | |||||||| ||||    
T  24004779 tagacaaaatcaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttgaaattcgaacctcagacaccacacttattc 24004878  T
Q  113 accttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||||||||||| |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  24004879 accttaaaaatattaatttttatcaatcatgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 24004958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 39997880 - 39997726
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||||||||||| | |    
T  39997880 ttgtagatgtagtagacaaaaacaaatctcaatgtatatcaaagagaatgaaatatgtggttccaaatatatgcagatgttggaattcgaacctcagaca 39997781  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcatt 155  Q
    ||||||| ||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  39997780 ccacacttattcacctttaaaatattaatttttatcaatcgtgtgttacttcatt 39997726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 23353688 - 23353808
Alignment:
Q  72 tgcacatgttagaattcgaacctcatataccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattat 171  Q
    |||| ||||| |||||||||||||| | ||| |||| ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||    
T  23353688 tgcagatgttggaattcgaacctcagacaccccacttattcaccttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattat 23353787  T
Q  172 atgtcaatgttatattcttgg 192  Q
    |||||||||||||||| ||||    
T  23353788 atgtcaatgttatattattgg 23353808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 25875441 - 25875530
Alignment:
Q  103 acactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  25875441 acacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 25875530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 18481929 - 18481991
Alignment:
Q  130 ttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  18481929 ttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 18481991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 39997709 - 39997660
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  39997709 atgttacttcattcttttgtaaaaattatatgtcaatgttatattattgg 39997660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 6299289 - 6299333
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  6299289 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 6299333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 10477897 - 10477853
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  10477897 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 10477853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 11142425 - 11142381
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  11142425 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 11142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 11725150 - 11725106
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  11725150 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 11725106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 18175341 - 18175297
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  18175341 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 18175297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 18997660 - 18997616
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  18997660 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 18997616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 19240624 - 19240580
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  19240624 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 19240580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 19313808 - 19313764
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  19313808 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 19313764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 19412796 - 19412752
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  19412796 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 19412752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 23353845 - 23353889
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  23353845 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 23353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 24408839 - 24408795
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  24408839 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 24408795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 30474152 - 30474196
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  30474152 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 30474196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 32111130 - 32111174
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  32111130 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 32111174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 35122584 - 35122628
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  35122584 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 35122628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 39997624 - 39997580
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  39997624 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 39997580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 44832456 - 44832500
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  44832456 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 44832500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 44836868 - 44836824
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  44836868 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 44836824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 18210892 - 18210935
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatat 186  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  18210892 atgttacttcattcttttgtaaaaattatatgttaatgttatat 18210935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 996084 - 996128
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||    
T  996084 atgttacttcattcttttgtaaaaattatatgttaatgttgtatt 996128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 18841873 - 18841829
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| ||||||||| || |||||||||||    
T  18841873 atgttacttcattcttttgtaaaaattatacgttaatgttatatt 18841829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 25875566 - 25875610
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  25875566 atgttacttcattattttgtaaaaattatatgttaatgttatatt 25875610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 28582821 - 28582777
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||    
T  28582821 atgttacttcattcttttgtaaaaattgtatgttaatgttatatt 28582777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 39257402 - 39257362
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgtta 183  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  39257402 atgttacttcattcttttgtaaaaattatatgttaatgtta 39257362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 18568863 - 18568817
Alignment:
Q  141 gtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||| |||||||||| |||||||||||| |||| ||||||    
T  18568863 gtatgttacttaattcttttgtaaaaattatatgttaatgctatatt 18568817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 9e-69; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 21670170 - 21669979
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  21670170 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 21670071  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21670070 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 21669979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 43933584 - 43933775
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||| ||||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  43933584 ttgtagatgtagtagacaaaaaaaaatctcaatgcatataaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 43933683  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43933684 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 43933775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 2 - 192
Target Start/End: Complemental strand, 21656816 - 21656626
Alignment:
Q  2 tgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatac 101  Q
    |||||||| |||||||||||| | |||| |||| |||||||||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| | ||    
T  21656816 tgtagatgaagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacac 21656717  T
Q  102 cacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21656716 cacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 21656626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 15109705 - 15109896
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  15109705 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 15109804  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||| ||||||| ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15109805 ccacacttattcatcttaaaagtattaatttttatcaattgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 15109896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 16376585 - 16376776
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  16376585 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 16376684  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16376685 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 16376776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 24924268 - 24924077
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||| | ||||| ||||| |||||||| | |    
T  24924268 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgtagatgttggaatttgaacctcagaca 24924169  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24924168 ccacacttattcaccttaaaaatattaaattttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 24924077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 27903457 - 27903648
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||||||||||| |    
T  27903457 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcataca 27903556  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  27903557 ccacacttattcaccttaaaaatattaatttttaccaatcgtgtcttacttcattcttttgttaaaattctatgtcaatgttatattattgg 27903648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 40969080 - 40968889
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||| ||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  40969080 ttgtagatgtagtagacacaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 40968981  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  40968980 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 40968889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 13786359 - 13786168
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  13786359 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 13786260  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  13786259 ccacacttattcaccttaaaaatattaatttttatcaatcgcgtcttacttcatttttttgttaaaattatatgtcaatgttatattattgg 13786168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 21753532 - 21753723
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| |||||||| |||||| ||||| |||||| ||||||||||| | | |    
T  21753532 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtctcaaatatatgcagatgttaaaattcgaaccttagaca 21753631  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  21753632 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 21753723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 21804612 - 21804803
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  21804612 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 21804711  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  21804712 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 21804803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 38163379 - 38163570
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  38163379 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 38163478  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38163479 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 38163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 42242194 - 42242385
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  42242194 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 42242293  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  42242294 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 42242385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 3840681 - 3840867
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  3840681 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 3840780  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  3840781 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatatt 3840867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 27138571 - 27138759
Alignment:
Q  4 tagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatacca 103  Q
    ||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | ||||    
T  27138571 tagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacacca 27138670  T
Q  104 cactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    | || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  27138671 cgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 27138759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 33916987 - 33917178
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  33916987 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 33917086  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  33917087 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttatttcattcttttgttaaaattatatgtcaatattatattattgg 33917178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 21342012 - 21341821
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| || |||||||||||| |||| |||| |||||||||||| |||||||||| ||| |||||| ||||| ||||| |||||||||||||| | |    
T  21342012 ttgtagatataatagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtagtctcaaatatatgcagatgttggaattcgaacctcagaca 21341913  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  21341912 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 21341821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 17178277 - 17178469
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||  |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  17178277 ttgtagatatagtagacaaaaacaaatctcaattcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 17178376  T
Q  101 ccacactaattcacc-ttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||   |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  17178377 ccacacttattcaccaaaaaaaatattaatttttatcaatcgggtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 17178469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 31373645 - 31373454
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| || |||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| |||||  ||||||||||||| | |    
T  31373645 ttgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgaaattcgaacctcagaca 31373546  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  31373545 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtattacttcattcttttgttaaaattatatgtcaatattatattattgg 31373454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 39030292 - 39030446
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | || | |||| |||||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  39030292 ttgtagatgtagtagacaaaaacaaatttcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 39030391  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcatt 155  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||    
T  39030392 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcatt 39030446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 31096746 - 31096698
Alignment:
Q  144 tgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  31096746 tgttacttcattcttttgttaaaattatatgtcaatattatattattgg 31096698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 3840911 - 3840955
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  3840911 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 3840955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 16376811 - 16376855
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  16376811 atgttacttcattattttgtaaaaattatatgtcaatgttatatt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 21341781 - 21341737
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  21341781 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 21341737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 21656591 - 21656547
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  21656591 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 21656547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 21669939 - 21669895
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  21669939 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 21669895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 21804841 - 21804885
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  21804841 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 21804885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 27138797 - 27138841
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  27138797 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 27138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 31373414 - 31373370
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  31373414 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 31373370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 33917216 - 33917260
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  33917216 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 33917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 42242423 - 42242467
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  42242423 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 42242467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 17178508 - 17178551
Alignment:
Q  144 tgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  17178508 tgttacttcattcttttgtaaaaattatatgttaatgttatatt 17178551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 24924042 - 24924001
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttat 184  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  24924042 atgttacttcattcttttgtaaaaattatatgttaatgttat 24924001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 43933815 - 43933856
Alignment:
Q  146 ttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  43933815 ttacttcattcttttgtaaaaattatatgttaatgttatatt 43933856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 15109929 - 15109973
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||    
T  15109929 atgttacttcattcttttgtaaaaattatatgttaatattatatt 15109973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 21753759 - 21753803
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  21753759 atgttacttcattattttgtaaaaattatatgttaatgttatatt 21753803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 27903685 - 27903729
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  27903685 atgttacttcattattttgtaaaaattatatgttaatgttatatt 27903729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 31096659 - 31096615
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| | |||||||||| |||||||||||    
T  31096659 atgttacttcattcttttgtaagaattatatgttaatgttatatt 31096615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 1e-67; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 16904992 - 16905177
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  16904992 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 16905091  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatat 186  Q
    ||||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  16905092 ccacacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgttaaaattatatgtcaatgttatat 16905177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 35760770 - 35760585
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||| ||||||| |||| ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  35760770 ttgtagatatagtagataaaaataaatctcaatgtatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaaca 35760671  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatat 186  Q
    ||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35760670 ccacaattattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatat 35760585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 31628527 - 31628718
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||| ||||||||||| | |||| |||| |||||||||||| | |||||||||||| |||||| ||||| ||||| |||||||||||||||| |    
T  31628527 ttgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaattaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcataca 31628626  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31628627 ccacacttattcatcttaaaaatattattttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 31628718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 46256223 - 46256032
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||||||||||||||||||| ||||| ||||| ||||| |||||||| | |    
T  46256223 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattggaacctcagaca 46256124  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  46256123 ccacacttattcaccttaaaaatattaatttttatcaatcgtatcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 46256032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 39058397 - 39058588
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | || ||||| ||||||||||||| ||||||||||||||||||||| ||  | ||||| |||||||||||||| |||    
T  39058397 ttgtagatatagtagacaaaaacaaattttaatatatatcaaagagaatgaaatatgtggtcccaaatatatcaagatgttggaattcgaacctcagata 39058496  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39058497 ccacacttattcaccttaaaaatattaatttttatcaatcatgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 39058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 45977032 - 45977221
Alignment:
Q  3 gtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatacc 102  Q
    |||||||||||||| ||||||| || | |||| |||||||||||| ||||||||||||||| ||||| ||||| ||||| |||||||||||||| | |||    
T  45977032 gtagatgtagtagataaaaataaatatcaatgcatatcaaagagaatgaaatatgtggtcctaaatatatgcagatgttggaattcgaacctcagacacc 45977131  T
Q  103 acactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45977132 acacttattcaccttaaaaatattaatttttatcaattgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 45977221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 48118582 - 48118762
Alignment:
Q  12 gtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaatt 111  Q
    ||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |||||||  |||    
T  48118582 gtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacgtatt 48118681  T
Q  112 caccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48118682 caccttaaaaatattaatttttaccaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 48118762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 44376119 - 44376310
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| |||||||| |||||| ||||| ||||| |||||||||||||| | |    
T  44376119 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcacaaatatatgcagatgttggaattcgaacctcagaca 44376218  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  44376219 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 44376310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 45782478 - 45782660
Alignment:
Q  10 tagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaa 109  Q
    ||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||| ||||| ||| | ||||| ||||| |||||||| | |||||||| |    
T  45782478 tagtagacaaaaataaatctcaatatatatcaaagagaatgaaatatgtggtcctaaatatatgaagatgttggaatttgaacctcagacaccacactta 45782577  T
Q  110 ttcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45782578 ttcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 45782660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 16917928 - 16918119
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  16917928 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 16918027  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  16918028 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 16918119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 33139511 - 33139702
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| | |||||||| |||||||||| ||||| ||||| |||||||||||||| | |    
T  33139511 ttgtagatttagtagacaaaaacaaatctcaatgcatatcaaagagaattaaatatgttgtcccaaatatatgcagatgttggaattcgaacctcagaca 33139610  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| | ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  33139611 ccacatttattcaccttaaaaatattaatttttatcaatcgtgtattacttcattcttttgttaaaattatatgtcaatgttatattattgg 33139702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 52434813 - 52434622
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  52434813 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 52434714  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  52434713 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 52434622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 30824962 - 30825153
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||||||||||| | |    
T  30824962 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggttccaaatatatgcagatgttggaattcgaacctcagaca 30825061  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  30825062 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 30825153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 37590844 - 37591035
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||  | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| |||||  ||||||||||||| | |    
T  37590844 ttgtagatgtagtagacaaaatcaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttgaaattcgaacctcagaca 37590943  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  37590944 ccacacttattcaccttaaaaatattaatttttatcaatcatgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 37591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 52098239 - 52098422
Alignment:
Q  10 tagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaa 109  Q
    ||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||| ||| ||| | || ||||| |    
T  52098239 tagtagacaaaaataaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcaaacttcagacacaacactta 52098338  T
Q  110 ttcaccttaaaaatatt-attttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52098339 ttcaccttaaaaatattaaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 52098422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 53143302 - 53143493
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| || |||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  53143302 ttgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 53143401  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  53143402 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 53143493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 54625139 - 54624955
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||||| |||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  54625139 ttgtagacgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 54625040  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| ||||||||      |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  54625039 ccacacttattcaccttaaaaatattaatttttatc------atgttacttcattc-tttgttaaaattatatgtcaatgttatattattgg 54624955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 31966009 - 31966200
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| || || ||| ||||| |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  31966009 ttgtagatttattatacataaataaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 31966108  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  31966109 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 31966200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 37651855 - 37651664
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||| ||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| | |    
T  37651855 ttgtagatatagtagacaaaaacaaatctcaatgcatatgaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcaaaca 37651756  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  37651755 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 37651664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 41387315 - 41387124
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| ||| |  ||||||||||||| | |    
T  41387315 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgctgaaattcgaacctcagaca 41387216  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  41387215 ccacacttattcaccttaaaaatattaatttttatcgatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 41387124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 47142840 - 47143031
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||| |||||||||| |||||| ||||| |||||||||||||||||||| | |    
T  47142840 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgacatatgtggtctcaaatatatgcagatgttagaattcgaacctcagaca 47142939  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||  || ||||||||||||||||||| |||||||| || || |||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  47142940 ccatgcttattcaccttaaaaatattaatttttatcgattgtgtgttacttcattcttttgttaaaattatatctcaatgttaaattattgg 47143031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 12090499 - 12090691
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||| | ||||| |||||||||||||| | |    
T  12090499 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgtagatgttggaattcgaacctcagaca 12090598  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttca-ttcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || ||||| |  |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  12090599 ccacgcttattcaaccaaaaaatattaatttttatcaatcgtgtgttacttcatttcttttgttaaaattatatgtcaatattatattattgg 12090691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 187
Target Start/End: Original strand, 50229771 - 50229933
Alignment:
Q  26 atcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaattcaccttaaaaatat 125  Q
    |||| |||| |||||||||||| ||||| ||||||||| ||||| ||||| ||||| |||||||||||||| | |||| ||| |||||||||||||||||    
T  50229771 atctcaatgcatatcaaagagaatgaaacatgtggtccaaaatatatgcagatgttggaattcgaacctcagacaccatacttattcaccttaaaaatat 50229870  T
Q  126 t-attttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    | ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  50229871 taattttttatcaatagtgtgttacttcattcttttgttaaaattatatgtcaatgttatatt 50229933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 12090729 - 12090773
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  12090729 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 12090773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 16905217 - 16905261
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  16905217 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 16905261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 16918157 - 16918201
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  16918157 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 16918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 30825191 - 30825235
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  30825191 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 30825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 31966238 - 31966282
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  31966238 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 31966282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 39058621 - 39058665
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  39058621 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 39058665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 45977263 - 45977307
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  45977263 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 45977307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 47143069 - 47143113
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  47143069 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 47143113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 48118801 - 48118845
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  48118801 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 48118845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 52098459 - 52098503
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  52098459 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 52098503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 52434584 - 52434540
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  52434584 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 52434540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 53143533 - 53143577
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  53143533 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 53143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 54624923 - 54624879
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  54624923 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 54624879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 50229712 - 50229766
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaata 55  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| |||||||    
T  50229712 ttgtagatgtagtagacaaaaaaaaatctcaatgcatatcaaagagaatgaaata 50229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 41387086 - 41387042
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  41387086 atgttacttcattattttgtaaaaattatatgttaatgttatatt 41387042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 44376346 - 44376390
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||    
T  44376346 atgttacttcattattttgtaaaaattatatgttaatgttatatt 44376390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 50229979 - 50230019
Alignment:
Q  147 tacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  50229979 tacttcattcttttgtaaaaattatatgttaatgttatatt 50230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 31628718 - 31628764
Alignment:
Q  141 gtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||| |||||||||| |||||||||||| |||| ||||||    
T  31628718 gtatgttacttaattcttttgtaaaaattatatgttaatgctatatt 31628764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 45782696 - 45782734
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgt 181  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  45782696 atgttacttcattcttttgtaaaaattatatgttaatgt 45782734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 37591069 - 37591113
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| ||||||| |||| |||||||||||    
T  37591069 atgttacttcattattttgtaaaaattacatgttaatgttatatt 37591113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 46255998 - 46255954
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| ||||| |||||    
T  46255998 atgttacttcattattttgtaaaaattatatgttaatgtcatatt 46255954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 18706549 - 18706739
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||||||| ||||| ||||| ||||| |||||||||||||||| |    
T  18706549 ttgtagatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtcc-aaatatatgcagatgttggaattcgaacctcataca 18706647  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  18706648 ccacacttattcacctgaaaaatattaatttttatcaatcgtgtgtaacttcattcttttgttaaaattatatgtcaacgttatattattgg 18706739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 23482747 - 23482938
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||| | | |||| |||| |||||||||||  ||||||||||||||||||||| ||||| ||||| |||||||||||||||| |    
T  23482747 ttgtagatgtagtagacaaatacaaatctcaatgcatatcaaagagcatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcataca 23482846  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  23482847 ccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaacgttatattattgg 23482938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 39728169 - 39727978
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  39728169 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 39728070  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  39728069 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 39727978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 7334131 - 7333942
Alignment:
Q  3 gtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatacc 102  Q
    |||||||||||||||||||| | |||| |||| |||||||||||| | ||||||||||||||||||| ||||| ||||| |||||| ||||||| | |||    
T  7334131 gtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaataaaatatgtggtcccaaatatatgcagatgttggaattcaaacctcagacacc 7334032  T
Q  103 acactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||| ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7334031 acacttattcaccataaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgttatattattgg 7333942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 4266570 - 4266379
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  4266570 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 4266471  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  4266470 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 4266379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 34888726 - 34888917
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  34888726 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 34888825  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  34888826 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 34888917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 35614256 - 35614065
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||| |||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| | | | |    
T  35614256 ttgtaaatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacttaagaca 35614157  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  35614156 ccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtcatattattgg 35614065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 38444820 - 38444629
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| |||||  ||||||||| ||| | |    
T  38444820 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttgaaattcgaacttcagaca 38444721  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  38444720 ccacacttattcaccttaaaaatattaatttttatcaataatgtgttacttcattcttttgataaaattatatgtcaatgttatattattgg 38444629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 38913787 - 38913978
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  38913787 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 38913886  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38913887 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 38913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 50151249 - 50151058
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  50151249 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 50151150  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  50151149 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 50151058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 35615004 - 35614819
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||| |||||||||||||||| | ||||||||| |||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| | |    
T  35615004 ttgtaaatgtagtagacaaaaacaaatcttaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcagaca 35614905  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||| ||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  35614904 ccacacttatttacctt-aaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatgtcatatt 35614819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 9216220 - 9216029
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||| ||||| | |||| |||| |||||||||||| | ||| ||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  9216220 ttgtagatatagtagataaaaacaaatctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 9216121  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||| ||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9216120 ccacacttatttaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 9216029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 52687154 - 52687339
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||| ||||||| | |||| ||||  ||| ||||||| ||||||||||||||||||||| ||||| ||||| |||| ||||||||| | |    
T  52687154 ttgtagatgtagtatacaaaaacaaatctcaatgcctatgaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaatccgaacctca-aca 52687252  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||    
T  52687253 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcatttttttattaaaattatatgtcaatgttatatt 52687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 2951421 - 2951597
Alignment:
Q  16 acaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaattcacc 115  Q
    ||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | ||||| || |||||||    
T  2951421 acaaaaaaaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 2951520  T
Q  116 ttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
      |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2951521 aaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 2951597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 19764593 - 19764771
Alignment:
Q  4 tagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatatacca 103  Q
    ||||||||||| ||||||| | |||| |||| |||| ||| ||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | ||||    
T  19764593 tagatgtagtatacaaaaacaaatctcaatgcatattaaaaagaatgaaatatgtggtcccaaatatatgcaaatgtttgaattcgaacctcagacacca 19764692  T
Q  104 cactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgtt 182  Q
    |||| ||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||||||| |||||||||||    
T  19764693 cacttattcaccttaaaaatattaatttttatgaatcgtgtgttacttcattattttgttaaaattacatgtcaatgtt 19764771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1231985 - 1231813
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||| || ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  1231985 ttgtaaatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 1231886  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatat 173  Q
    |||| || |||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  1231885 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatat 1231813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 18855273 - 18855463
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    ||||||||| ||||||||||   | |||| |||| |||||||||||| | ||| ||||||||||||||| ||| | |||||  ||||||||||||| | |    
T  18855273 ttgtagatgcagtagacaaatcaa-atctcaatgcatatcaaagagaataaaacatgtggtcccaaatatatgtagatgttgaaattcgaacctcagaca 18855371  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  18855372 ccacacttattcaccttaaaaatattaatttttatcaatcatgtattacttcattcttttgttaaaattatatgtcaatgttatattattgg 18855463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 192
Target Start/End: Complemental strand, 19768602 - 19768462
Alignment:
Q  52 aatatgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaattcaccttaaaaatattattttttatcaatcgtatgttactt 151  Q
    |||||||||| ||||||||||| | |||||  | ||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  19768602 aatatgtggttccaaatacatgtagatgttgaatttcgaacctcagacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttactt 19768503  T
Q  152 cattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  19768502 cattcttttgttaaaattatatgtcaatgttatattattgg 19768462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 2590468 - 2590333
Alignment:
Q  56 tgtggtcccaaatacatgcacatgttagaattcgaacctcatataccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcatt 155  Q
    |||||| ||||||| ||||| ||||| |||||| ||||||| | |||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||    
T  2590468 tgtggttccaaatatatgcagatgttcgaattc-aacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcatt 2590370  T
Q  156 cttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2590369 cttttgttaaaattatatgtcaatgttatattattgg 2590333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 31018240 - 31018354
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  31018240 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 31018339  T
Q  101 ccacactaattcacc 115  Q
    |||| || |||||||    
T  31018340 ccacgcttattcacc 31018354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 50326190 - 50326076
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  50326190 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 50326091  T
Q  101 ccacactaattcacc 115  Q
    |||| || |||||||    
T  50326090 ccacgcttattcacc 50326076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 5061412 - 5061338
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgca 75  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| |||||    
T  5061412 ttgtagatgtagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgca 5061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 1231769 - 1231725
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  1231769 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 1231725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 2951635 - 2951679
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  2951635 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 2951679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 4266341 - 4266297
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  4266341 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 4266297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 18706772 - 18706816
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  18706772 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 18706816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 19764813 - 19764857
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  19764813 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 19764857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 19768426 - 19768382
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  19768426 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 19768382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 23482971 - 23483015
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  23482971 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 23483015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 35614778 - 35614734
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  35614778 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 35614734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 38914016 - 38914060
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  38914016 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 38914060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 52036309 - 52036353
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  52036309 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 52036353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 7333903 - 7333863
Alignment:
Q  147 tacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  7333903 tacttcattcttttgtaaaaattatatgttaatgttatatt 7333863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 35614028 - 35613984
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||    
T  35614028 atgttacttcattcttttgtaaaaattatatgttaattttatatt 35613984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 38444593 - 38444549
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  38444593 atgttaattcattcttttgtaaaaattatatgttaatgttatatt 38444549  T

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Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 52687380 - 52687424
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||    
T  52687380 atgttgcttcattcttttgtaaaaattatatgttaatgttatatt 52687424  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29942207 - 29942153
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaata 55  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| |||||||    
T  29942207 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaata 29942153  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 39727940 - 39727896
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    ||||||||||||| |||||| |||||||||||| ||||| |||||    
T  39727940 atgttacttcattattttgtaaaaattatatgttaatgtaatatt 39727896  T

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Target: scaffold0173 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 19536 - 19345
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||||||||||||||| | |||| |||| |||| ||||| | | ||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  19536 ttgtagatgtagtagacaaaaacaaatctcaatgcatattaaagataattaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 19437  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    ||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  19436 ccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaatgttatattattgg 19345  T

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Target: scaffold0022 (Bit Score: 120; Significance: 1e-61; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 149090 - 149281
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| ||| | |    
T  149090 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacatcaaaca 149189  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    | ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  149190 caacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaacgttatattattgg 149281  T

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Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 149317 - 149361
Alignment:
Q  143 atgttacttcattcttttgttaaaattatatgtcaatgttatatt 187  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  149317 atgttacttcattcttttgtaaaaattatatgttaatgttatatt 149361  T

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Target: scaffold0031 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 46463 - 46272
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| ||||||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  46463 ttgtagatatagtagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 46364  T
Q  101 ccacactaattcaccttaaaaatattattttttatcaatcgtatgttacttcattcttttgttaaaattatatgtcaatgttatattcttgg 192  Q
    |||| || |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  46363 ccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaatattatattattgg 46272  T

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Target: scaffold0515 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 6101 - 6232
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||| ||||||||||| | |||| |||| |||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| | |    
T  6101 ttgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcaaaca 6200  T
Q  101 ccacactaattcaccttaaaaatattattttt 132  Q
    ||||||| ||||| ||||||||||||| ||||    
T  6201 ccacacttattcatcttaaaaatattaatttt 6232  T

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Target: scaffold0306 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 6111 - 6242
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||||| ||||||||||| | |||| |||| |||||||||||| |||||||||||||| |||||| ||||| ||||| |||||||||||||| | |    
T  6111 ttgtagatgttgtagacaaaaacatatctcaatgcatatcaaagagaatgaaatatgtggtctcaaatatatgcagatgttggaattcgaacctcaaaca 6210  T
Q  101 ccacactaattcaccttaaaaatattattttt 132  Q
    ||||||| ||||| ||||||||||||| ||||    
T  6211 ccacacttattcatcttaaaaatattaatttt 6242  T

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Target: scaffold0836 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 5318 - 5430
Alignment:
Q  1 ttgtagatgtagtagacaaaaatacatcttaatgtatatcaaagagattgaaatatgtggtcccaaatacatgcacatgttagaattcgaacctcatata 100  Q
    |||||||| || |||||||||| | |||| |||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| | |    
T  5318 ttgtagatataatagacaaaaacaaatctcaatgcatatcaaagagaatgaaatatgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 5417  T
Q  101 ccacactaattca 113  Q
    |||| || |||||    
T  5418 ccacgcttattca 5430  T

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