View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13714_low_7 (Length: 528)

Name: NF13714_low_7
Description: NF13714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13714_low_7
NF13714_low_7
[»] chr1 (71 HSPs)
chr1 (116-512)||(40754597-40754995)
chr1 (14-110)||(40754451-40754547)
chr1 (14-74)||(2886181-2886241)
chr1 (10-74)||(31798428-31798492)
chr1 (14-74)||(46363449-46363509)
chr1 (9-74)||(33149283-33149348)
chr1 (5-73)||(12267660-12267728)
chr1 (14-74)||(24131438-24131498)
chr1 (14-74)||(29756180-29756240)
chr1 (14-74)||(37925284-37925344)
chr1 (14-74)||(52382424-52382484)
chr1 (17-74)||(51049518-51049575)
chr1 (20-73)||(52146396-52146449)
chr1 (14-74)||(2219486-2219546)
chr1 (18-74)||(19349036-19349092)
chr1 (14-66)||(26924158-26924210)
chr1 (14-74)||(27932871-27932931)
chr1 (20-74)||(52146699-52146753)
chr1 (18-74)||(10587623-10587679)
chr1 (18-74)||(29225763-29225819)
chr1 (14-74)||(50333945-50334005)
chr1 (18-73)||(2571374-2571429)
chr1 (31-74)||(16451641-16451684)
chr1 (31-74)||(16460794-16460837)
chr1 (18-71)||(34813930-34813983)
chr1 (17-74)||(39420594-39420651)
chr1 (14-74)||(705387-705447)
chr1 (18-74)||(3718891-3718947)
chr1 (14-74)||(4466192-4466252)
chr1 (14-74)||(11425907-11425967)
chr1 (18-74)||(17342838-17342894)
chr1 (14-74)||(27210005-27210065)
chr1 (18-74)||(32587775-32587831)
chr1 (18-74)||(40061819-40061875)
chr1 (19-74)||(5442350-5442405)
chr1 (19-74)||(8327727-8327782)
chr1 (19-74)||(21304394-21304449)
chr1 (14-69)||(27142961-27143015)
chr1 (19-74)||(28839349-28839404)
chr1 (17-72)||(29225449-29225504)
chr1 (14-69)||(37495844-37495899)
chr1 (17-74)||(18186247-18186304)
chr1 (17-66)||(37281038-37281087)
chr1 (14-74)||(5115863-5115923)
chr1 (14-66)||(5503438-5503490)
chr1 (14-74)||(14352576-14352636)
chr1 (14-74)||(26583738-26583798)
chr1 (18-74)||(27831856-27831912)
chr1 (14-74)||(36232827-36232887)
chr1 (14-70)||(37541151-37541207)
chr1 (18-54)||(45305883-45305919)
chr1 (14-74)||(50086019-50086079)
chr1 (18-74)||(51749225-51749281)
chr1 (18-73)||(2246319-2246374)
chr1 (19-74)||(7785317-7785372)
chr1 (19-74)||(13500772-13500827)
chr1 (23-74)||(35622826-35622877)
chr1 (19-74)||(36784324-36784379)
chr1 (14-72)||(16040089-16040147)
chr1 (18-72)||(27391359-27391413)
chr1 (14-63)||(21304844-21304893)
chr1 (19-56)||(43895875-43895912)
chr1 (17-74)||(44580526-44580583)
chr1 (22-74)||(17724760-17724812)
chr1 (18-74)||(25842609-25842665)
chr1 (18-50)||(26606179-26606211)
chr1 (18-74)||(34877132-34877188)
chr1 (18-74)||(45889290-45889346)
chr1 (18-74)||(46496028-46496084)
chr1 (18-74)||(50267480-50267536)
chr1 (22-66)||(52432330-52432374)
[»] chr2 (54 HSPs)
chr2 (14-74)||(7931533-7931593)
chr2 (11-69)||(36748163-36748221)
chr2 (17-74)||(3199908-3199965)
chr2 (14-74)||(2427370-2427430)
chr2 (14-74)||(6972577-6972637)
chr2 (14-74)||(7213485-7213545)
chr2 (14-74)||(13222078-13222138)
chr2 (19-74)||(5212000-5212055)
chr2 (19-74)||(23684969-23685024)
chr2 (19-74)||(28301444-28301499)
chr2 (17-74)||(2048302-2048359)
chr2 (14-71)||(28844072-28844129)
chr2 (14-74)||(9472432-9472492)
chr2 (18-74)||(19515891-19515947)
chr2 (14-74)||(24356121-24356181)
chr2 (18-74)||(26273769-26273825)
chr2 (14-74)||(43427123-43427183)
chr2 (19-74)||(28572218-28572273)
chr2 (14-74)||(928575-928633)
chr2 (5-74)||(18460498-18460567)
chr2 (18-74)||(4794583-4794639)
chr2 (18-74)||(6213891-6213947)
chr2 (18-74)||(8550683-8550739)
chr2 (18-74)||(10069626-10069682)
chr2 (18-74)||(14384319-14384375)
chr2 (18-74)||(44424304-44424360)
chr2 (19-74)||(435120-435175)
chr2 (19-74)||(3100410-3100465)
chr2 (15-70)||(4283057-4283112)
chr2 (19-74)||(11726764-11726819)
chr2 (19-74)||(37247926-37247981)
chr2 (19-74)||(41436089-41436144)
chr2 (14-52)||(314459-314497)
chr2 (18-56)||(11842563-11842601)
chr2 (25-74)||(3487404-3487453)
chr2 (14-74)||(9724890-9724948)
chr2 (17-74)||(31348521-31348578)
chr2 (17-66)||(39166736-39166785)
chr2 (14-74)||(1908531-1908591)
chr2 (19-71)||(2881998-2882050)
chr2 (38-74)||(5711003-5711039)
chr2 (18-74)||(8031751-8031807)
chr2 (18-74)||(13026577-13026633)
chr2 (18-54)||(29937955-29937991)
chr2 (18-74)||(31592560-31592616)
chr2 (14-74)||(37529108-37529168)
chr2 (19-74)||(18181255-18181310)
chr2 (19-74)||(44534525-44534580)
chr2 (20-74)||(6685706-6685760)
chr2 (21-74)||(36396502-36396555)
chr2 (20-56)||(13718852-13718888)
chr2 (15-70)||(38872960-38873013)
chr2 (18-74)||(39095641-39095697)
chr2 (18-74)||(44024728-44024784)
[»] chr4 (57 HSPs)
chr4 (5-74)||(35998145-35998214)
chr4 (13-74)||(29550763-29550824)
chr4 (14-74)||(36047137-36047197)
chr4 (14-74)||(38319921-38319981)
chr4 (14-74)||(39052938-39052998)
chr4 (14-74)||(8759789-8759849)
chr4 (14-74)||(10099762-10099822)
chr4 (14-74)||(37315959-37316019)
chr4 (14-74)||(47277719-47277779)
chr4 (14-74)||(48400668-48400728)
chr4 (15-74)||(49218820-49218879)
chr4 (10-69)||(53848661-53848720)
chr4 (12-74)||(4354458-4354520)
chr4 (10-74)||(11583904-11583968)
chr4 (18-74)||(22020551-22020607)
chr4 (14-74)||(32949886-32949946)
chr4 (14-74)||(42132823-42132883)
chr4 (18-74)||(49448851-49448907)
chr4 (14-74)||(54217352-54217412)
chr4 (14-74)||(55360385-55360445)
chr4 (19-74)||(18849801-18849856)
chr4 (19-74)||(37309708-37309763)
chr4 (17-74)||(25149461-25149518)
chr4 (14-74)||(20964325-20964385)
chr4 (18-74)||(22872429-22872485)
chr4 (14-74)||(28330804-28330864)
chr4 (18-74)||(46958732-46958788)
chr4 (19-70)||(1796284-1796335)
chr4 (19-74)||(29644365-29644420)
chr4 (19-74)||(30568669-30568724)
chr4 (19-74)||(42185838-42185893)
chr4 (19-74)||(47846909-47846964)
chr4 (17-66)||(3505740-3505789)
chr4 (14-63)||(33093496-33093545)
chr4 (25-74)||(39976438-39976487)
chr4 (18-71)||(52677072-52677125)
chr4 (18-74)||(28974316-28974372)
chr4 (18-74)||(38160193-38160249)
chr4 (14-74)||(44633167-44633226)
chr4 (23-74)||(3686021-3686072)
chr4 (19-54)||(10309297-10309332)
chr4 (19-74)||(17237053-17237108)
chr4 (19-74)||(26799258-26799313)
chr4 (19-74)||(41436491-41436546)
chr4 (19-74)||(41710186-41710241)
chr4 (19-66)||(43421318-43421365)
chr4 (19-74)||(49306597-49306652)
chr4 (19-54)||(50328113-50328148)
chr4 (19-74)||(54729526-54729580)
chr4 (10-48)||(13719811-13719849)
chr4 (18-56)||(38615004-38615042)
chr4 (19-56)||(34021065-34021102)
chr4 (22-74)||(4360453-4360505)
chr4 (18-74)||(12619698-12619754)
chr4 (18-74)||(21954471-21954527)
chr4 (18-74)||(25250634-25250690)
chr4 (14-74)||(49401666-49401726)
[»] chr8 (58 HSPs)
chr8 (10-74)||(11637150-11637214)
chr8 (10-74)||(32679045-32679109)
chr8 (10-69)||(8394288-8394347)
chr8 (14-74)||(14748743-14748803)
chr8 (14-74)||(39998173-39998233)
chr8 (17-74)||(14689970-14690027)
chr8 (10-74)||(8418335-8418399)
chr8 (10-74)||(25174618-25174682)
chr8 (14-74)||(28791318-28791378)
chr8 (14-74)||(41726531-41726591)
chr8 (14-74)||(41759667-41759727)
chr8 (18-74)||(2195478-2195534)
chr8 (14-74)||(14117472-14117532)
chr8 (18-74)||(27868366-27868422)
chr8 (18-74)||(29567215-29567271)
chr8 (10-74)||(29638311-29638375)
chr8 (14-74)||(40077787-40077847)
chr8 (19-74)||(4274341-4274396)
chr8 (18-69)||(5878267-5878318)
chr8 (23-74)||(33925130-33925181)
chr8 (14-56)||(23764994-23765036)
chr8 (25-74)||(32231768-32231817)
chr8 (14-74)||(45420976-45421037)
chr8 (18-74)||(2797050-2797106)
chr8 (18-74)||(2875127-2875183)
chr8 (18-74)||(7258408-7258464)
chr8 (18-74)||(27987668-27987724)
chr8 (18-74)||(28044970-28045026)
chr8 (14-70)||(37459364-37459420)
chr8 (18-74)||(42412424-42412480)
chr8 (19-74)||(5392059-5392114)
chr8 (15-66)||(17005963-17006014)
chr8 (15-66)||(17571234-17571285)
chr8 (19-74)||(31410650-31410705)
chr8 (19-74)||(42558623-42558678)
chr8 (18-56)||(1230403-1230441)
chr8 (14-54)||(886485-886525)
chr8 (22-74)||(7755104-7755156)
chr8 (10-74)||(8618138-8618202)
chr8 (14-50)||(9734204-9734240)
chr8 (18-74)||(10728963-10729019)
chr8 (18-74)||(15559171-15559227)
chr8 (18-74)||(29451359-29451415)
chr8 (14-74)||(33743786-33743846)
chr8 (14-74)||(43844920-43844979)
chr8 (18-74)||(45537413-45537469)
chr8 (19-78)||(3384540-3384599)
chr8 (19-74)||(28802777-28802832)
chr8 (19-74)||(31132740-31132795)
chr8 (19-74)||(32241466-32241521)
chr8 (19-74)||(33190951-33191006)
chr8 (18-73)||(37219805-37219860)
chr8 (19-74)||(39171553-39171608)
chr8 (23-74)||(44615411-44615462)
chr8 (19-74)||(44790464-44790519)
chr8 (18-71)||(33826244-33826297)
chr8 (17-74)||(38201431-38201488)
chr8 (22-74)||(38586015-38586067)
[»] scaffold0155 (1 HSPs)
scaffold0155 (15-74)||(7992-8051)
[»] chr6 (22 HSPs)
chr6 (19-74)||(34803749-34803804)
chr6 (14-74)||(15371900-15371960)
chr6 (14-74)||(15321262-15321322)
chr6 (14-74)||(15351420-15351480)
chr6 (14-74)||(33017981-33018041)
chr6 (14-74)||(33921506-33921566)
chr6 (14-74)||(2310325-2310385)
chr6 (14-74)||(8232348-8232407)
chr6 (14-74)||(15325157-15325217)
chr6 (14-74)||(4552919-4552979)
chr6 (14-69)||(15355590-15355645)
chr6 (20-74)||(117089-117143)
chr6 (10-72)||(3874083-3874145)
chr6 (25-74)||(8569787-8569836)
chr6 (14-74)||(3166145-3166205)
chr6 (19-74)||(4238432-4238486)
chr6 (19-74)||(31265789-31265844)
chr6 (24-74)||(3604647-3604697)
chr6 (20-74)||(26356279-26356333)
chr6 (18-72)||(31075965-31076019)
chr6 (14-74)||(9354477-9354540)
chr6 (18-51)||(16126244-16126277)
[»] chr3 (41 HSPs)
chr3 (15-74)||(46194244-46194303)
chr3 (14-74)||(1923100-1923160)
chr3 (10-74)||(41287272-41287336)
chr3 (17-74)||(53051036-53051093)
chr3 (14-74)||(1334818-1334878)
chr3 (14-74)||(32977827-32977887)
chr3 (18-74)||(39329791-39329847)
chr3 (19-74)||(21296545-21296600)
chr3 (19-74)||(43639558-43639613)
chr3 (5-74)||(29858893-29858962)
chr3 (9-74)||(48409594-48409659)
chr3 (18-74)||(9218155-9218211)
chr3 (19-71)||(54122266-54122318)
chr3 (18-74)||(3862213-3862269)
chr3 (18-74)||(27668368-27668424)
chr3 (14-74)||(53754101-53754161)
chr3 (14-74)||(54021495-54021555)
chr3 (19-74)||(26134745-26134800)
chr3 (18-69)||(35300652-35300703)
chr3 (14-69)||(51164967-51165022)
chr3 (19-73)||(46786023-46786077)
chr3 (17-74)||(47496179-47496236)
chr3 (24-72)||(8498266-8498314)
chr3 (14-74)||(38600843-38600903)
chr3 (18-74)||(42547147-42547203)
chr3 (18-74)||(46627966-46628022)
chr3 (19-74)||(5245422-5245477)
chr3 (19-74)||(15280615-15280670)
chr3 (23-74)||(32023147-32023198)
chr3 (19-74)||(39866595-39866650)
chr3 (17-68)||(49122174-49122225)
chr3 (19-74)||(52325187-52325242)
chr3 (19-66)||(53876478-53876525)
chr3 (24-74)||(7885753-7885803)
chr3 (22-52)||(29361641-29361671)
chr3 (25-74)||(36097703-36097752)
chr3 (14-74)||(21585447-21585507)
chr3 (22-74)||(26832081-26832133)
chr3 (18-74)||(44219074-44219130)
chr3 (18-74)||(44234100-44234156)
chr3 (22-74)||(45746376-45746428)
[»] scaffold0685 (1 HSPs)
scaffold0685 (14-74)||(6437-6497)
[»] scaffold0221 (1 HSPs)
scaffold0221 (14-74)||(10828-10888)
[»] chr7 (49 HSPs)
chr7 (14-74)||(2849265-2849325)
chr7 (15-74)||(37264323-37264382)
chr7 (14-72)||(45218195-45218253)
chr7 (17-74)||(9602871-9602928)
chr7 (17-74)||(9830442-9830499)
chr7 (14-74)||(29997066-29997126)
chr7 (14-74)||(38589744-38589804)
chr7 (14-72)||(32775995-32776053)
chr7 (13-74)||(5068334-5068395)
chr7 (17-74)||(21412076-21412132)
chr7 (18-74)||(25778754-25778810)
chr7 (10-74)||(27337906-27337970)
chr7 (10-74)||(36070115-36070179)
chr7 (18-74)||(37496438-37496494)
chr7 (19-74)||(2842094-2842149)
chr7 (15-74)||(10355773-10355832)
chr7 (19-74)||(38181916-38181971)
chr7 (19-74)||(46095462-46095517)
chr7 (19-73)||(7425920-7425974)
chr7 (14-63)||(6838083-6838132)
chr7 (21-74)||(32972062-32972115)
chr7 (18-74)||(3667918-3667974)
chr7 (18-74)||(14648960-14649016)
chr7 (14-74)||(24288433-24288493)
chr7 (10-74)||(30462670-30462734)
chr7 (18-74)||(34001900-34001956)
chr7 (18-74)||(34064225-34064281)
chr7 (14-74)||(39343708-39343768)
chr7 (14-74)||(47238227-47238287)
chr7 (19-74)||(46288473-46288528)
chr7 (20-74)||(1643381-1643435)
chr7 (18-74)||(6591582-6591638)
chr7 (14-66)||(18731457-18731509)
chr7 (18-74)||(25940790-25940846)
chr7 (18-74)||(28333181-28333237)
chr7 (14-74)||(30659517-30659577)
chr7 (14-74)||(43007904-43007964)
chr7 (23-54)||(2211711-2211742)
chr7 (19-74)||(29257557-29257612)
chr7 (19-74)||(33584573-33584628)
chr7 (19-74)||(33774085-33774140)
chr7 (18-68)||(19687975-19688025)
chr7 (20-74)||(35013965-35014019)
chr7 (21-74)||(29434624-29434677)
chr7 (22-54)||(27242775-27242807)
chr7 (10-54)||(30459092-30459136)
chr7 (18-50)||(32346552-32346584)
chr7 (18-74)||(39498684-39498740)
chr7 (22-50)||(40023772-40023800)
[»] chr5 (55 HSPs)
chr5 (14-74)||(15898201-15898261)
chr5 (15-74)||(13087780-13087839)
chr5 (15-74)||(38978914-38978973)
chr5 (19-74)||(8369739-8369794)
chr5 (15-74)||(13016402-13016461)
chr5 (17-74)||(10044678-10044735)
chr5 (18-74)||(6173022-6173078)
chr5 (14-74)||(25108583-25108643)
chr5 (14-74)||(25111186-25111246)
chr5 (14-74)||(25167675-25167735)
chr5 (14-74)||(25170277-25170337)
chr5 (14-74)||(31090314-31090374)
chr5 (14-74)||(39060992-39061052)
chr5 (19-74)||(17242997-17243052)
chr5 (19-74)||(36446730-36446785)
chr5 (19-74)||(42211343-42211398)
chr5 (19-74)||(42575681-42575736)
chr5 (17-74)||(15564929-15564986)
chr5 (17-74)||(19889574-19889631)
chr5 (18-74)||(858345-858401)
chr5 (14-74)||(7871324-7871383)
chr5 (18-74)||(16883973-16884029)
chr5 (18-74)||(25344780-25344836)
chr5 (18-74)||(39212593-39212649)
chr5 (14-74)||(42818914-42818973)
chr5 (15-74)||(791986-792045)
chr5 (14-65)||(16926129-16926180)
chr5 (19-74)||(17699343-17699398)
chr5 (14-69)||(31196334-31196389)
chr5 (19-74)||(35334569-35334624)
chr5 (19-74)||(35646132-35646187)
chr5 (19-74)||(36469137-36469192)
chr5 (19-74)||(39183670-39183725)
chr5 (24-73)||(146748-146797)
chr5 (17-74)||(43525488-43525545)
chr5 (18-74)||(72147-72203)
chr5 (14-74)||(4044515-4044575)
chr5 (18-74)||(5072960-5073016)
chr5 (14-50)||(5147534-5147570)
chr5 (14-74)||(5357855-5357915)
chr5 (18-66)||(7311222-7311270)
chr5 (19-67)||(16283630-16283678)
chr5 (18-74)||(35988644-35988700)
chr5 (18-54)||(42158688-42158724)
chr5 (19-74)||(8692861-8692916)
chr5 (19-74)||(11099520-11099575)
chr5 (19-74)||(22582915-22582969)
chr5 (19-74)||(39008139-39008193)
chr5 (15-74)||(39035894-39035953)
chr5 (18-74)||(22982957-22983010)
chr5 (18-71)||(32659829-32659882)
chr5 (14-67)||(39060460-39060513)
chr5 (18-74)||(20189902-20189958)
chr5 (19-71)||(35585659-35585711)
chr5 (14-74)||(36006930-36006990)
[»] scaffold0086 (1 HSPs)
scaffold0086 (15-74)||(5828-5887)
[»] scaffold0009 (1 HSPs)
scaffold0009 (14-66)||(220011-220063)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-73)||(352498-352557)
[»] scaffold0262 (1 HSPs)
scaffold0262 (14-74)||(12473-12533)
[»] scaffold0006 (1 HSPs)
scaffold0006 (18-74)||(229833-229889)
[»] scaffold0576 (1 HSPs)
scaffold0576 (14-69)||(580-635)
[»] scaffold0028 (1 HSPs)
scaffold0028 (19-74)||(26623-26678)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-74)||(230266-230322)
[»] scaffold0001 (1 HSPs)
scaffold0001 (14-74)||(394788-394848)
[»] scaffold0020 (1 HSPs)
scaffold0020 (18-75)||(171235-171292)


Alignment Details
Target: chr1 (Bit Score: 340; Significance: 0; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 116 - 512
Target Start/End: Original strand, 40754597 - 40754995
Alignment:
Q  116 taatactaaaactcagaaacttctacagagatagtactagttgataatcaatgcttagatttacaagaacccttgcaacactaatctttcacattttcta 215  Q
    ||||| |||| || ||||||||| | ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40754597 taataataaagcttagaaacttcaagagagatagta---gttgataatcaatgcttagatttacaagaacccttgcaacactaatctttcacattttcta 40754693  T
Q  216 agttgaatgtgcaatctcaaggttcaaagaacaaattccaagaccttggcctcattttccgtacattataattattgtgatcttgactatattctatggt 315  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40754694 agttgaatgtgcagtctcaaggttcaaagaacaaattccaagaccttggcctcattttccgtacattataattattgtgatcttgactatattctatggt 40754793  T
Q  316 tgatgaaaagaatattcatttttcaatatatttatcttggcctatgtagagaacgtcaagtatatatcttctagctaagtttcactctctttgccggcca 415  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40754794 tgatgaaaagaatattcatttttcaatttatttatcttggcctatgtagagaacgtcaagtatatatcttctagctaagtttcactctctttgccggcca 40754893  T
Q  416 caaaaatacaactgtcttactaaccttaacctcaatacttatacaac-----tgacatagttaacaatgttagtcctagtactttacgaaaaatatacta 510  Q
    |||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40754894 caaaaatacaactgtcttactaaccttaacctcaatacttatacaactgacatgacatagttaacaatgttagtcctagtactttacgaaaaatatacta 40754993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 40754451 - 40754547
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaataattctnnnnnnntaattaatattgtattaaaaagt 110  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |       ||||||||||| |||||||||||    
T  40754451 ttctttatcataaatgcaaagtagaatatattaaattgagagttgtgaaagtagtattaataattgtaaaaaaataattaatattatattaaaaagt 40754547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 2886241 - 2886181
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  2886241 ttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaat 2886181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 31798492 - 31798428
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  31798492 attattctttatcataaatgcaaagtagaatatattgaattgagagtagtgaaagtaatattaat 31798428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 46363449 - 46363509
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  46363449 ttctttatcataaatgcaaagtaaaatatattgaattgagagtggtggaagtagtattaat 46363509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33149348 - 33149283
Alignment:
Q  9 gattattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  33149348 gattcttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaat 33149283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 12267660 - 12267728
Alignment:
Q  5 ggtagattattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    |||| ||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  12267660 ggtacattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtattaa 12267728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 24131438 - 24131498
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  24131438 ttctttatcataaatgcaaagtataatatattgaattgggagtggtgaaagtagtattaat 24131498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 29756180 - 29756240
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  29756180 ttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaat 29756240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 37925284 - 37925344
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  37925284 ttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 37925344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 52382424 - 52382484
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  52382424 ttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtaatattaat 52382484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 51049575 - 51049518
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  51049575 tttatcataaatgtaaagtataatatattgaattgggagttgtgaaagtagtattaat 51049518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 52146396 - 52146449
Alignment:
Q  20 atcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  52146396 atcataaatgcaaagtaaaatatgtcgaattgagagttgtgaaagtagtattaa 52146449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 2219486 - 2219546
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||    
T  2219486 ttctttatcataaatgtaaagtaaaatatattgaattggaagttgtgaacgtagtattaat 2219546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 19349036 - 19349092
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  19349036 ttatcataaatgcaaaatagaatatattgaattgagagttttgaaagtagtattaat 19349092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 26924158 - 26924210
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  26924158 ttctttatcataaatgcaaagtataatatattgaattgagagtggtgaaagta 26924210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 27932871 - 27932931
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||    
T  27932871 ttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaggttgtattaat 27932931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 52146699 - 52146753
Alignment:
Q  20 atcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||    
T  52146699 atcataaatgcaaagtagaatatgtcgaattgagagttgtgaaagtagtattaat 52146753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 10587623 - 10587679
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| || |||||||||||||||||||  ||||||||||||||||    
T  10587623 ttatcataaatgcaaaatagaatatattgaattgagagtgatgaaagtagtattaat 10587679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 29225819 - 29225763
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  29225819 ttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaat 29225763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 50334005 - 50333945
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| | ||||||||||||||||| ||||||||| |||||||    
T  50334005 ttctttatcataaatgtaaagtagagtatattgaattgagagtggtgaaagtattattaat 50333945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 2571429 - 2571374
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    ||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  2571429 ttatcctaaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaa 2571374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 16451684 - 16451641
Alignment:
Q  31 aaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  16451684 aaagttaaatatattgaattgagagttgtgaaagtagtattaat 16451641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 16460837 - 16460794
Alignment:
Q  31 aaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  16460837 aaagttaaatatattgaattgagagttgtgaaagtagtattaat 16460794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 34813983 - 34813930
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatt 71  Q
    ||||||||||||||||||| ||||||||||||||||| |  |||||||||||||    
T  34813983 ttatcataaatgcaaagtagaatatattgaattgagaatgatgaaagtagtatt 34813930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 39420651 - 39420594
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||| ||||||||||||||||| || ||||||||||| || ||||||||||||||||    
T  39420651 tttattataaatgcaaagtaaaacatgttgaattgagaattatgaaagtagtattaat 39420594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 705387 - 705447
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| ||| |||||| ||||||||||||||||||| || |||||| |||||||    
T  705387 ttctttatcatagatgtaaagtataatatattgaattgagagtggtaaaagtaatattaat 705447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 3718891 - 3718947
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||| |||||||||||||||||||  |||| |||||||||||    
T  3718891 ttatcataaatgtaaagtataatatattgaattgagagtgatgaaggtagtattaat 3718947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 4466192 - 4466252
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||| ||||  ||| |||||||||||||||||    
T  4466192 ttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtagtattaat 4466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 11425907 - 11425967
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||| ||||  ||| |||||||||||||||||    
T  11425907 ttctttatcataaatgtaaagtagaatatattgtattggaagtagtgaaagtagtattaat 11425967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 17342894 - 17342838
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| |||||| ||||||||||||||||||||  | ||||||||||||||    
T  17342894 ttatcataaatacaaagtgaaatatattgaattgagagtgataaaagtagtattaat 17342838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 27210005 - 27210065
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||| | ||||||||||||||||||| ||||||  |||||||||    
T  27210005 ttctttatcataaatgtaaaggagaatatattgaattgagagtggtgaaaagagtattaat 27210065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 32587831 - 32587775
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||| || |||||||    
T  32587831 ttatcataaatgcaaagtgaaatatattgaattgagagtgatgaaattattattaat 32587775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 40061875 - 40061819
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| || |||||||||||||||||||  |||||||| |||||||    
T  40061875 ttatcataaatgcaaattagaatatattgaattgagagtgatgaaagtaatattaat 40061819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 5442405 - 5442350
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||||  ||||||||||||| |||||||    
T  5442405 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtaatattaat 5442350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 8327782 - 8327727
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| |  |||||||||||||||||||  ||||||||||||||||    
T  8327782 tatcataaatgcaaaatggaatatattgaattgagagtgatgaaagtagtattaat 8327727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 21304449 - 21304394
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| |||||||||||||| |||||  |||||||| |||||||    
T  21304449 tatcataaatgcaaagtgaaatatattgaattaagagtgatgaaagtaatattaat 21304394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 27142961 - 27143015
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    |||||||| ||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  27142961 ttctttatgataaatgtaaagtaaaatatattgaa-tgagagtggtgaaagtagta 27143015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 28839404 - 28839349
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||| ||||  ||||||||||||||||    
T  28839404 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaat 28839349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 29225449 - 29225504
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatta 72  Q
    ||||||||||||| |||||| ||||||||||||||  ||| |||||||||||||||    
T  29225449 tttatcataaatggaaagtagaatatattgaattggaagtggtgaaagtagtatta 29225504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 37495899 - 37495844
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    |||||||| ||||||| |||||| |||||||||||||| |||| ||||||||||||    
T  37495899 ttctttattataaatgtaaagtagaatatattgaattgggagtagtgaaagtagta 37495844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 18186247 - 18186304
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||  || |||||||||| ||||||| |||| |||||||||||||||||    
T  18186247 tttatcataaatataatgtaaaatatactgaattgggagtggtgaaagtagtattaat 18186304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 37281038 - 37281087
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    ||||||||||||| |||||| |||||||||||||| |||| |||||||||    
T  37281038 tttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagta 37281087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 5115863 - 5115923
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||  || ||||||||||||||||||  ||||||||| |||||||    
T  5115863 ttctttatcataaatgtaatatagaatatattgaattgagagaggtgaaagtaatattaat 5115923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 5503490 - 5503438
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||  ||||||||    
T  5503490 ttctttatcattaattcaaagtataatatattgaattgagagtgatgaaagta 5503438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 14352636 - 14352576
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||| |||||  |||||| |||||||||||||| |||| ||||||||| |||||||    
T  14352636 ttctttatcgtaaatataaagtagaatatattgaattgggagtggtgaaagtaatattaat 14352576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 26583798 - 26583738
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| || |||||||||||||| ||||  ||||| || |||||||    
T  26583798 ttctttatcataaatgcaaaatagaatatattgaattgggagtgatgaaaatattattaat 26583738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 27831912 - 27831856
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  || ||||||||||| ||||  ||||||||||||||||    
T  27831912 ttatcataaatgcaaagtggaagatattgaattgggagtgatgaaagtagtattaat 27831856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 36232827 - 36232887
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||  |||||| ||||||||||||||  | | |||||||||||||||||    
T  36232827 ttctttatcataaatataaagtagaatatattgaattggaaatggtgaaagtagtattaat 36232887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 37541151 - 37541207
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtat 70  Q
    |||||||| ||||||| |||||| ||||||||||||||  ||| |||||||||||||    
T  37541151 ttctttattataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtat 37541207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 45305919 - 45305883
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgaga 54  Q
    ||||||||||||||||||| |||||||||||||||||    
T  45305919 ttatcataaatgcaaagtagaatatattgaattgaga 45305883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 50086079 - 50086019
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||  | || |||||| ||||||||||    
T  50086079 ttctttatcataaatgtaaagtagaatatattgaatttggtgtggtgaaaatagtattaat 50086019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 51749225 - 51749281
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||| ||||  |||||||| |||||||    
T  51749225 ttatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaat 51749281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 2246319 - 2246374
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    |||||||||||| |||||| || || |||||||||||||  |||||||||||||||    
T  2246319 ttatcataaatgtaaagtagaagatgttgaattgagagtgatgaaagtagtattaa 2246374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 7785317 - 7785372
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||| |||||||||||||||||||   | ||||||||||||||    
T  7785317 tatcataaatgtaaagtgaaatatattgaattgagagcgataaaagtagtattaat 7785372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 13500772 - 13500827
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  || ||||||||||| ||||  ||||||||||||||||    
T  13500772 tatcataaatgcaaagtggaaaatattgaattgggagtgctgaaagtagtattaat 13500827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 35622826 - 35622877
Alignment:
Q  23 ataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||| ||||||||||||||  | || ||||||||||||||||    
T  35622826 ataaatgcaaagtagaatatattgaattggcaattatgaaagtagtattaat 35622877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 36784379 - 36784324
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||   |||||||||| || |||||||    
T  36784379 tatcataaatgcaaagtgaaatatattgaatttgaagttgtgaaaataatattaat 36784324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 16040147 - 16040089
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatta 72  Q
    |||||||||||||||| |||||| ||||||||| ||||  ||| ||||||||| |||||    
T  16040147 ttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtaatatta 16040089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 27391413 - 27391359
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatta 72  Q
    ||||||||||||||||||  ||||||||||||||| | | ||||||||| |||||    
T  27391413 ttatcataaatgcaaagtggaatatattgaattgaaaatggtgaaagtaatatta 27391359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 21304844 - 21304893
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaa 63  Q
    |||||||||||||||  |||||| ||||||||||||| ||||| ||||||    
T  21304844 ttctttatcataaatataaagtataatatattgaattaagagtggtgaaa 21304893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 43895912 - 43895875
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagt 56  Q
    |||||||||||||||||  |||||||||||||||||||    
T  43895912 tatcataaatgcaaagttgaatatattgaattgagagt 43895875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 44580583 - 44580526
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||||| ||||  |||| ||||| ||| |||||||    
T  44580583 tttatcataaatgcaaagtagaatatattaaattaggagtggtgaatgtaatattaat 44580526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 17724760 - 17724812
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| ||| |||||||||| ||||  ||||| ||||||||||    
T  17724760 cataaatgcaaagtagaatttattgaattgggagtgatgaaaatagtattaat 17724812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 25842665 - 25842609
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||| ||||||||| ||||||| |  |||||||||| |||||    
T  25842665 ttatcataaatgtaaagtagaatatattgcattgagaatgatgaaagtagtgttaat 25842609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 26606179 - 26606211
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaatt 50  Q
    |||||||||||||||| ||||||||||||||||    
T  26606179 ttatcataaatgcaaattaaaatatattgaatt 26606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 34877132 - 34877188
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||| ||||  ||||| || |||||||    
T  34877132 ttatcataaatgcaaagttgaatatattgaattgtgagtgatgaaaataatattaat 34877188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 45889290 - 45889346
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||  || |  ||||||||||||||||    
T  45889290 ttatcataaatgcaaagtggaatatattgaattatgaatgatgaaagtagtattaat 45889346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 46496084 - 46496028
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||  | ||  ||||||||||||||||    
T  46496084 ttatcataaatgcaaagtggaatatattgaattaggcgtgatgaaagtagtattaat 46496028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 50267480 - 50267536
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| ||||| ||||||||||||||| || |  |||||||| |||||||    
T  50267480 ttatcataaatgtaaagtgaaatatattgaattgggaatgatgaaagtaatattaat 50267536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 52432374 - 52432330
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    |||||||| ||||| |||||||||||||||  |||||||||||||    
T  52432374 cataaatgtaaagtgaaatatattgaattgtaagttgtgaaagta 52432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 7931533 - 7931593
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7931533 ttctttatcataaatgtaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 7931593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 36748221 - 36748163
Alignment:
Q  11 ttattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  36748221 ttattctttatcataaatttaaagtaaaatatattgaattgagaattgtgaaagtagta 36748163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 3199965 - 3199908
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  3199965 tttatcataaatgcaaagtataatatattgaattgggagtggtgaaagtagtattaat 3199908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 2427430 - 2427370
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||| |||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  2427430 ttctttgtcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaat 2427370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 6972577 - 6972637
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||||| |||||||    
T  6972577 ttctttatcataaatgcaaagtagaatatattgaattgagagtggtaaaagtaatattaat 6972637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 7213545 - 7213485
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||| ||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  7213545 ttctttattataaatgtaaagtggaatatattgaattgagagttgtgaaagtagtattaat 7213485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 13222138 - 13222078
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||    
T  13222138 ttctttatcataaatgcaaagtaaaatatattgaattggaagtggtgaaagtaatattaat 13222078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 5212000 - 5212055
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  5212000 tatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaat 5212055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 23685024 - 23684969
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  23685024 tatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaat 23684969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 28301499 - 28301444
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  28301499 tatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaat 28301444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 2048359 - 2048302
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| || |||||||    
T  2048359 tttatcataaatgcaaagtagaatatattgaattgagagtagtgaaaataatattaat 2048302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 28844129 - 28844072
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatt 71  Q
    |||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  28844129 ttctttatcataaatgtaaagtataatatattgaattgagagtggtgaaagtattatt 28844072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 9472492 - 9472432
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| | |||| ||||||||||||||| ||| |||||||||||||||||    
T  9472492 ttctttatcataaatgtatagtagaatatattgaattgatagtggtgaaagtagtattaat 9472432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 19515947 - 19515891
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||    
T  19515947 ttatcataaatgcaaagtaaaatatattgaattgtaagtaatgaaagtagtattaat 19515891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 24356181 - 24356121
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||| |||||||| |||| |||||||||||||||||    
T  24356181 ttctttatcataaatgtaaagtagaatatgttgaattgggagtcgtgaaagtagtattaat 24356121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 26273825 - 26273769
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  26273825 ttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaat 26273769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 43427123 - 43427183
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| || |||||||||||||| ||||  ||||||||||||||||    
T  43427123 ttctttatcataaatgcaaaatagaatatattgaattgggagtgatgaaagtagtattaat 43427183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 28572273 - 28572218
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| | |||||||||||||||  |||||||||||||||||||||    
T  28572273 tatcataaatgcaaaatgaaatatattgaattggaagttgtgaaagtagtattaat 28572218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 928575 - 928633
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| || ||||||||  ||||||||| |||||||||||||||||    
T  928575 ttctttatcataaatgcaaaatagaatatatt--attgagagtggtgaaagtagtattaat 928633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 18460567 - 18460498
Alignment:
Q  5 ggtagattattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||| ||| |||||| ||||||||| |||||| ||||||||||||||||||||||  ||||| |||||||    
T  18460567 ggtacattcttctttgtcataaatgtaaagtagaatatattgaattgagagttgtagaagtaatattaat 18460498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4794639 - 4794583
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  ||||||||||||||| |||  ||||||||||||||||    
T  4794639 ttatcataaatgcaaagtggaatatattgaattgaaagtgatgaaagtagtattaat 4794583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 6213891 - 6213947
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||| |||| |||||  ||||||||||||||||    
T  6213891 ttatcataaatgcaaagtagaatatattcaattaagagtgatgaaagtagtattaat 6213947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 8550683 - 8550739
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  ||||||||||||| |||||  ||||||||||||||||    
T  8550683 ttatcataaatgcaaagtctaatatattgaattaagagtgatgaaagtagtattaat 8550739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 10069626 - 10069682
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||||||||  |||||||| |||||||    
T  10069626 ttatcataaatgcaaagtcgaatatattgaattgagagtgatgaaagtattattaat 10069682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 14384319 - 14384375
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||| |||||||||||||||||||   |||||||||||||||    
T  14384319 ttatcataaatgtaaagtataatatattgaattgagagtgaagaaagtagtattaat 14384375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 44424304 - 44424360
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  ||||||||||||||||| |  ||||||||||||||||    
T  44424304 ttatcataaatgcaaagttgaatatattgaattgagaatgatgaaagtagtattaat 44424360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 435120 - 435175
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||| |||||||||||||||||| |  ||||||||||||||||    
T  435120 tatcataaatgtaaagtgaaatatattgaattgagaatgatgaaagtagtattaat 435175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 3100465 - 3100410
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||| |||||  |||||||||||||||||||||    
T  3100465 tatcataaatgcaaagtggaatatattaaattggaagttgtgaaagtagtattaat 3100410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 4283057 - 4283112
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtat 70  Q
    ||||||||||||||| ||| || ||||||||||||||||||| || ||||||||||    
T  4283057 tctttatcataaatgtaaaatagaatatattgaattgagagtggtaaaagtagtat 4283112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 11726764 - 11726819
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||| ||||||||| ||||||||||||| |||||  ||||||||||||||||    
T  11726764 tatcataattgcaaagtagaatatattgaattaagagtgatgaaagtagtattaat 11726819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 37247926 - 37247981
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||||| ||  |||||||| |||||||    
T  37247926 tatcataaatgcaaagtgaaatatattgaattgagtgtgatgaaagtaatattaat 37247981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 41436144 - 41436089
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||||||| |  ||||||||||||||||    
T  41436144 tatcataaatgcaaagtggaatatattgaattgagaatgatgaaagtagtattaat 41436089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 314497 - 314459
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattga 52  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  314497 ttctttatcataaatgcaaagtagaatatattgaattga 314459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 11842601 - 11842563
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagt 56  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  11842601 ttatcataaatgcaaaataaaatatattgaattgagagt 11842563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 3487453 - 3487404
Alignment:
Q  25 aaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||||||||||||||||  |||||||| |||||||    
T  3487453 aaatgcaaagtagaatatattgaattgagagtgatgaaagtaatattaat 3487404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 9724948 - 9724890
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||| | |  |||||||||||||||||    
T  9724948 ttctttatcataaatgtaaagtagaatatattgaattggggg--gtgaaagtagtattaat 9724890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 31348578 - 31348521
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| |||| |||||||||||||  || | |||||||||||||||||    
T  31348578 tttatcataaatgcatagtagaatatattgaattaggaatggtgaaagtagtattaat 31348521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 39166736 - 39166785
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    ||||||||||||| |||||| |||||||||||||| |||| |||||||||    
T  39166736 tttatcataaatgtaaagtataatatattgaattgggagtagtgaaagta 39166785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 1908531 - 1908591
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||  ||| |||||| || |||||||    
T  1908531 ttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaaataatattaat 1908591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 2882050 - 2881998
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatt 71  Q
    ||||||||||||||||| |||||||||| ||||||||  |||||| |||||||    
T  2882050 tatcataaatgcaaagtgaaatatattgtattgagaggagtgaaaatagtatt 2881998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 5711039 - 5711003
Alignment:
Q  38 aatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5711039 aatatattgaattgagagtggtgaaagtagtattaat 5711003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 8031807 - 8031751
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| ||||||||||||||| || |  | ||||||||||||||    
T  8031807 ttatcataaatgcaaagttaaatatattgaattgtgaatgataaaagtagtattaat 8031751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 13026633 - 13026577
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||| | ||||||||||||||| ||||||  |||||||| |||||||    
T  13026633 ttatcataaatgcataataaaatatattgaatcgagagtgatgaaagtaatattaat 13026577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 29937955 - 29937991
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgaga 54  Q
    ||||||||||| |||||||||||||||||||||||||    
T  29937955 ttatcataaatacaaagtaaaatatattgaattgaga 29937991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 31592616 - 31592560
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||||| |||||||||||||||||||  ||||| || |||||||    
T  31592616 ttatcataaatacaaagtagaatatattgaattgagagtgatgaaaataatattaat 31592560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 37529108 - 37529168
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||| |||||||||  ||| ||||||||| |||||||    
T  37529108 ttctttatcataaatgtaaagtagaataaattgaattggaagtggtgaaagtaatattaat 37529168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 18181255 - 18181310
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| ||||| |||||||| || |  ||||||||||||||||    
T  18181255 tatcataaatgcaaagtagaatattttgaattgggaataatgaaagtagtattaat 18181310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 44534525 - 44534580
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||||  || ||||||| ||||||||||    
T  44534525 tatcataaatgcaaagtggaatatattgaattggaagctgtgaaattagtattaat 44534580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 6685706 - 6685760
Alignment:
Q  20 atcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||| |||||| ||||||||||||||  ||| |||||||| ||||||||    
T  6685706 atcataaatgtaaagtagaatatattgaattggaagtggtgaaagttgtattaat 6685760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 36396502 - 36396555
Alignment:
Q  21 tcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||||| |||| | ||||||||||  |||||||||    
T  36396502 tcataaatgcaaagtataatatattaaattaaaagttgtgaaataagtattaat 36396555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 13718852 - 13718888
Alignment:
Q  20 atcataaatgcaaagtaaaatatattgaattgagagt 56  Q
    |||||||||||||||||||| |||||||||| |||||    
T  13718852 atcataaatgcaaagtaaaaaatattgaattaagagt 13718888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 38872960 - 38873013
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtat 70  Q
    ||||||||||||||  |||||||  |||||||||||| |||| |||||||||||||    
T  38872960 tctttatcataaatataaagtaa--tatattgaattgggagtggtgaaagtagtat 38873013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 39095697 - 39095641
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  ||||||||||||||  |||  |||||||| |||||||    
T  39095697 ttatcataaatgcaaagtggaatatattgaattgtcagtgatgaaagtaatattaat 39095641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 44024784 - 44024728
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||| || ||| |  ||||| ||||||||||    
T  44024784 ttatcataaatgcaaagtagaatatattgagttaagaatgatgaaaatagtattaat 44024728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 9e-22; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 35998145 - 35998214
Alignment:
Q  5 ggtagattattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  35998145 ggtacattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtagtattaat 35998214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 29550763 - 29550824
Alignment:
Q  13 attctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  29550763 attctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtattaat 29550824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 36047137 - 36047197
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  36047137 ttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 36047197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 38319981 - 38319921
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  38319981 ttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaat 38319921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 39052938 - 39052998
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  39052938 ttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaat 39052998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 8759849 - 8759789
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||||    
T  8759849 ttctttatcataaatgcaaagtagaatatattgaattgggagttgtgaaattattattaat 8759789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 10099762 - 10099822
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||    
T  10099762 ttctttatcataaatttaaagtagaatatattgaattgggagttgtgaaagtagtattaat 10099822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 37315959 - 37316019
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||| |||||||| |||| |||||||||||||||||    
T  37315959 ttctttatcataaatgcaaagtagaatatgttgaattgggagtggtgaaagtagtattaat 37316019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 47277719 - 47277779
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||||||||||||||||||||||||||  | ||||||||||||||    
T  47277719 ttctttatcataaatgtaaagtaaaatatattgaattgagagtgattaaagtagtattaat 47277779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 48400668 - 48400728
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||||    
T  48400668 ttctttatcataaatgtaaagtagaatatattgaattgagagttgtgaaagtgatattaat 48400728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 49218820 - 49218879
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  49218820 tctttatcataaattcaaagtataatatattgaattgagagtggtgaaagtaatattaat 49218879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 53848720 - 53848661
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  53848720 attattatttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagta 53848661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 4354520 - 4354458
Alignment:
Q  12 tattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| ||  || |||||||| ||||||||||||||||||||||||||||    
T  4354520 tattctttatcataaatgtaatttagaatatattaaattgagagttgtgaaagtagtattaat 4354458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 11583904 - 11583968
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||||  |||||||| |||||||    
T  11583904 attattctttattataaatgtaaagtaaaatatattaaattgagagtgatgaaagtaatattaat 11583968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 22020551 - 22020607
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||||||| ||||    
T  22020551 ttatcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtaataat 22020607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 32949886 - 32949946
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||| || |||||||    
T  32949886 ttctttatcataaatgtaaagtagaatatattgaattgagagtagtgaaaataatattaat 32949946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 42132883 - 42132823
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||  ||| ||||||||| |||||||    
T  42132883 ttctttatcataaatgcaaagtagaatatattgaattggaagtggtgaaagtaatattaat 42132823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 49448907 - 49448851
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||    
T  49448907 ttatcataaatgcaaagtataatatattgaattgagaatgatgaaagtagtattaat 49448851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 54217412 - 54217352
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| ||||||||| |||||||||||||| |||| |||||||| ||||||||    
T  54217412 ttctttatcataactgcaaagtataatatattgaattgggagtggtgaaagtggtattaat 54217352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 55360385 - 55360445
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||||||||  |||||||| |||||||    
T  55360385 ttctttatcataaatgtaaagtacaatatattgaattgagagtgatgaaagtaatattaat 55360445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 18849801 - 18849856
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  18849801 tatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtaatattaat 18849856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 37309763 - 37309708
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  37309763 tatcataaatgcaaagttaaatatattgaattgagagtgatgaaagtaatattaat 37309708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 25149518 - 25149461
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||||  ||||||||||||||  |||||||||||||||||||||    
T  25149518 tttatcataaatgtaaagtggaatatattgaattggaagttgtgaaagtagtattaat 25149461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 20964325 - 20964385
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||| ||||||||||||| ||||||| ||||||  ||| |||||||||||||||||    
T  20964325 ttctttatcgtaaatgcaaagtagaatatatcgaattggaagtggtgaaagtagtattaat 20964385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 22872429 - 22872485
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||||||||  |||||||| |||||||    
T  22872429 ttatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaat 22872485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 28330864 - 28330804
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||| | | |||||||||||| |||| ||||||||| |||||||    
T  28330864 ttctttatcataaatgcaaagcagattatattgaattgggagtggtgaaagtaatattaat 28330804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 46958788 - 46958732
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||| |||||||| |||||||||||||||||||  | ||||||||||||||    
T  46958788 ttatcataaacgcaaagtagaatatattgaattgagagtgattaaagtagtattaat 46958732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 1796284 - 1796335
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtat 70  Q
    |||||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  1796284 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtat 1796335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 29644420 - 29644365
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| |||||| ||||||||||||||||| |  ||||||||||||||||    
T  29644420 tatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaat 29644365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 30568724 - 30568669
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||| || |||||||    
T  30568724 tatcataaatgcaaagtgaaatatattgaattgagagtgatgaaaataatattaat 30568669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 42185838 - 42185893
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||| ||| || ||||||||||||||||||||  ||||||||||||||||    
T  42185838 tatcataaatacaaggtgaaatatattgaattgagagtgatgaaagtagtattaat 42185893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 47846964 - 47846909
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||  ||||  ||||||||||||||||    
T  47846964 tatcataaatgcaaagtgaaatatattgaattaggagtgatgaaagtagtattaat 47846909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 3505789 - 3505740
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    ||||||||||||| |||||| ||||||||||||||||| | |||||||||    
T  3505789 tttatcataaatgtaaagtagaatatattgaattgagattagtgaaagta 3505740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 33093496 - 33093545
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaa 63  Q
    |||||||||||||||| ||||||  |||||||||||||||||| ||||||    
T  33093496 ttctttatcataaatgtaaagtaggatatattgaattgagagtggtgaaa 33093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 39976438 - 39976487
Alignment:
Q  25 aaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||  |||||||||||||||||||  ||||||||||||||||    
T  39976438 aaatgcaaagtggaatatattgaattgagagtgatgaaagtagtattaat 39976487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 52677072 - 52677125
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatt 71  Q
    |||||||||||| ||||||||||||||| ||||||||||  |||||||| ||||    
T  52677072 ttatcataaatgtaaagtaaaatatattaaattgagagtgatgaaagtactatt 52677125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 28974372 - 28974316
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||   ||||||||||| |||||||  ||||||||||||||||    
T  28974372 ttatcataaatgcaaaggggaatatattgaaatgagagtgatgaaagtagtattaat 28974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 38160193 - 38160249
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| |||||| ||||||||||||||||||||  | |||||| |||||||    
T  38160193 ttatcataaatacaaagtgaaatatattgaattgagagtgataaaagtaatattaat 38160249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 44633226 - 44633167
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||| ||||||| |||||| || |||||||||||| ||| |||||||||||||||||    
T  44633226 ttctttatgataaatgtaaagtagaa-atattgaattgaaagtggtgaaagtagtattaat 44633167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 3686072 - 3686021
Alignment:
Q  23 ataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||  |||||||||||||||||||  |||||||| |||||||    
T  3686072 ataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaat 3686021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 10309297 - 10309332
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgaga 54  Q
    ||||||||||||||| ||||||||||||||||||||    
T  10309297 tatcataaatgcaaaataaaatatattgaattgaga 10309332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 17237108 - 17237053
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||||| ||   ||||||||||||||||    
T  17237108 tatcataaatgcaaagtggaatatattgaattgaaagcgatgaaagtagtattaat 17237053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 26799258 - 26799313
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| || ||||||||||||||||| |  |||||||| |||||||    
T  26799258 tatcataaatgcaaaatagaatatattgaattgagaatgatgaaagtactattaat 26799313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 41436546 - 41436491
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| ||||| |||||||| || |  ||||||||||||||||    
T  41436546 tatcataaatgcaaagtagaatattttgaattgcgaatgatgaaagtagtattaat 41436491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 41710186 - 41710241
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||| ||||  |||||||| |||||||    
T  41710186 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaat 41710241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 43421365 - 43421318
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    ||||||||||||||| | |||||||||||||||  |||||||||||||    
T  43421365 tatcataaatgcaaaatgaaatatattgaattggaagttgtgaaagta 43421318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 49306652 - 49306597
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||  ||||  ||||||||||||||||    
T  49306652 tatcataaatgcaaagtggaatatattgaattaggagtgatgaaagtagtattaat 49306597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 50328113 - 50328148
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgaga 54  Q
    ||||||||||||||||| ||||||||||||||||||    
T  50328113 tatcataaatgcaaagtgaaatatattgaattgaga 50328148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 54729526 - 54729580
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||||| ||  ||||||||||||||||    
T  54729526 tatcataaatgcaaagtggaatatattgaattgag-gtgatgaaagtagtattaat 54729580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 13719849 - 13719811
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaa 48  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  13719849 attattctttatcataaatgtaaagtataatatattgaa 13719811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 38615004 - 38615042
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagt 56  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  38615004 ttatcataaatgcaaaataaaatatattgaattgggagt 38615042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 34021102 - 34021065
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagt 56  Q
    |||||||||||||||||  |||||||||||||||||||    
T  34021102 tatcataaatgcaaagtctaatatattgaattgagagt 34021065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 4360453 - 4360505
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||  |||||||||||||| || |  ||||||||||||||||    
T  4360453 cataaatgcaaagtggaatatattgaattgtgaatgatgaaagtagtattaat 4360505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 12619754 - 12619698
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| |||| | |||||||||||||| | |||  ||||||||||||||||    
T  12619754 ttatcataaatacaaaatgaaatatattgaatttaaagtgatgaaagtagtattaat 12619698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 21954471 - 21954527
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| ||||||||||||| ||||||| || |  ||||||| ||||||||    
T  21954471 ttatcataaatgtaaagtaaaatatactgaattgtgaatgatgaaagttgtattaat 21954527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 25250634 - 25250690
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||| |||| |||||||| |||| |||||  ||||| ||||||||||    
T  25250634 ttatcataaatgcatagtagaatatattaaattaagagtgatgaaactagtattaat 25250690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 49401726 - 49401666
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||| ||||||| |||||| ||||||||||||||  | || ||||||| ||||||||    
T  49401726 ttctttattataaatgtaaagtagaatatattgaattggaaattatgaaagtggtattaat 49401666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 11637214 - 11637150
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  11637214 attattctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaat 11637150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 32679109 - 32679045
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  32679109 attattctttatcataaatgtaaagtaaaatatattaaattgagagttgtaaaagtagtattaat 32679045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 8394288 - 8394347
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  8394288 attattctttatcataaatacaaagtaaaatatattgaattgagagtggtgaaagtagta 8394347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 14748743 - 14748803
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  14748743 ttctttatcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtattaat 14748803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 39998233 - 39998173
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  39998233 ttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaat 39998173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 14690027 - 14689970
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  14690027 tttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaat 14689970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 8418335 - 8418399
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||  ||||||||||||||||    
T  8418335 attattctttatcataaatgtaaagtagaatatactgaattgagagtgatgaaagtagtattaat 8418399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 25174618 - 25174682
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||| | ||||||| |||||||    
T  25174618 attattctttattataaatgcaaagtagaatatattgaattgagagtagggaaagtaatattaat 25174682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 28791378 - 28791318
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||    
T  28791378 ttctttatcataaatgtaaactagaatatattgaattgggagttgtgaaagtagtattaat 28791318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 41726591 - 41726531
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||    
T  41726591 ttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaattagtattaat 41726531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 41759667 - 41759727
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||    
T  41759667 ttctttatcataaatacaaagtaaaatatattgaattgggagtagtgaaagtaatattaat 41759727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 2195534 - 2195478
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  2195534 ttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaat 2195478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 14117532 - 14117472
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||  ||||||||||||||| ||||||||||||| |||||||    
T  14117532 ttctttatcataaatgtaaagttgaatatattgaattgaaagttgtgaaagtaatattaat 14117472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 27868366 - 27868422
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||    
T  27868366 ttatcataaatgcaaagtagaatatattgaattgagaatgatgaaagtagtattaat 27868422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 29567271 - 29567215
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||    
T  29567271 ttatcataaatacaaagtaaaatatattgcattaagagttatgaaagtagtattaat 29567215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 29638375 - 29638311
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||| |||||||||||||  |||| ||||||||| |||||||    
T  29638375 attattctttatcataaatgtaaagtataatatattgaattaggagtggtgaaagtaatattaat 29638311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 40077787 - 40077847
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||  |||||||||||||| |||||||    
T  40077787 ttctttatcataaatgtaaagtagaatatattgaatttggagttgtgaaagtaatattaat 40077847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 4274341 - 4274396
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| || |||||||    
T  4274341 tatcataaatgcaaagtgaaatatattgaattgagagtggtgaaaataatattaat 4274396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 5878267 - 5878318
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  5878267 ttatcataaatgtaaagtagaatatattgaattgagagttgtgaaattagta 5878318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 33925130 - 33925181
Alignment:
Q  23 ataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  33925130 ataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaat 33925181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 23765036 - 23764994
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagt 56  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  23765036 ttctttatcataaatgtaaagtaaaatatattgaattgagagt 23764994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 32231768 - 32231817
Alignment:
Q  25 aaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  32231768 aaatgcaaagtaaaatatattgaattgggagtggtgaaagtattattaat 32231817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 45420976 - 45421037
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtg-aaagtagtattaat 74  Q
    ||||||||||||||||||||||||||||||||||||   |||| ||| ||||||||||||||    
T  45420976 ttctttatcataaatgcaaagtaaaatatattgaatcaggagtggtgaaaagtagtattaat 45421037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 2797106 - 2797050
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||| ||||  |||||||| |||||||    
T  2797106 ttatcataaatgcaaagtagaatatattgaattgggagtaatgaaagtaatattaat 2797050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 2875127 - 2875183
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| ||||||||||||| ||||   ||||||||||||||||    
T  2875127 ttatcataaatgcaaagtagaatatattgaatttagaggaatgaaagtagtattaat 2875183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 7258408 - 7258464
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| || |||||||||||||| ||||  ||||||||||||||||    
T  7258408 ttatcataaatgcaaactagaatatattgaattgggagtgatgaaagtagtattaat 7258464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 27987724 - 27987668
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| | ||||||||||||||| ||||  ||||||||||||||||    
T  27987724 ttatcataaatgcaaaatgaaatatattgaattgtgagtgatgaaagtagtattaat 27987668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 28045026 - 28044970
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| | ||||||||||||||| ||||  ||||||||||||||||    
T  28045026 ttatcataaatgcaaaatgaaatatattgaattgtgagtgatgaaagtagtattaat 28044970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 37459420 - 37459364
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtat 70  Q
    ||||||||||||||||||||||  |||||||| ||||| |||| |||||||||||||    
T  37459420 ttctttatcataaatgcaaagttgaatatattaaattgggagtggtgaaagtagtat 37459364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 42412424 - 42412480
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||| ||||  ||||||||||||||||    
T  42412424 ttatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaat 42412480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 5392114 - 5392059
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||| ||||  ||||||||||||||||    
T  5392114 tatcataaatgcaaagtggaatatattgaattgggagtgttgaaagtagtattaat 5392059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 17006014 - 17005963
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    |||||||||||||||||||||| |||||||||||||| ||||  ||||||||    
T  17006014 tctttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagta 17005963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 17571234 - 17571285
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    |||||||||||||||||||||| |||||||||||||| ||||  ||||||||    
T  17571234 tctttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagta 17571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 31410650 - 31410705
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||| |||||  ||||||||||||||||    
T  31410650 tatcataaatgcaaagtggaatatattgaattaagagtaatgaaagtagtattaat 31410705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 42558623 - 42558678
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||| |||||  ||||||||||||||||    
T  42558623 tatcataaatgcaaagtggaatatattgaattaagagtgatgaaagtagtattaat 42558678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 1230403 - 1230441
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagt 56  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1230403 ttatcataaatgcaaagtagaatatattgaattgagagt 1230441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 886485 - 886525
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgaga 54  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  886485 ttctttatcataaatgcaaagtagaatatatcgaattgaga 886525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 7755104 - 7755156
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| ||||| |||| ||||||||  ||||||||||||||||    
T  7755104 cataaatgcaaagtataatattttgagttgagagtgatgaaagtagtattaat 7755156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 8618202 - 8618138
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| ||| || ||||||||||||||  ||| || ||| ||||||||||    
T  8618202 attattctttatcataaatgtaaaatataatatattgaattggaagtggtaaaaatagtattaat 8618138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 9734204 - 9734240
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaatt 50  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9734204 ttctttatcataaatgcaaagtaaaatatattaaatt 9734240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 10728963 - 10729019
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||| ||||  | ||||||||||||||    
T  10728963 ttatcataaatgcaaagtggaatatattgaattgggagtgattaaagtagtattaat 10729019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 15559171 - 15559227
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||  ||||  ||||||| ||||||||    
T  15559171 ttatcataaatgcaaagtagaatatattgaattaggagtgatgaaagtggtattaat 15559227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 29451415 - 29451359
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||||| |||||||||||||||| ||  ||||||||||| ||||    
T  29451415 ttatcataaatccaaagtataatatattgaattgagggtgatgaaagtagtactaat 29451359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 33743846 - 33743786
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| ||||||| |||||||| ||||| ||||  |||||||| |||||||    
T  33743846 ttctttatcataaatacaaagtagaatatattaaattgtgagtgatgaaagtaatattaat 33743786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 43844920 - 43844979
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||||||||||||| | ||||| ||||||| ||||||| ||||||    
T  43844920 ttctttatcataaatgtaaagtaaaatataattaattg-gagttgttaaagtagaattaat 43844979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 45537413 - 45537469
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||| ||||||||||| |||||||||||||| |||  ||||| ||||||||||    
T  45537413 ttatcatatatgcaaagtaacatatattgaattgatagtgatgaaaatagtattaat 45537469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 3384599 - 3384540
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaataatt 78  Q
    |||||||||||||||||  ||||||||||||||| |||  |||||||| ||||| |||||    
T  3384599 tatcataaatgcaaagttgaatatattgaattgaaagtgatgaaagtaatattattaatt 3384540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 28802832 - 28802777
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||||||||  ||||| || |||||||    
T  28802832 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaaatattattaat 28802777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 31132795 - 31132740
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| |  |||||| | |||||| |||||||||||||||||||||    
T  31132795 tatcataaatgcaaaatggaatataatcaattgaaagttgtgaaagtagtattaat 31132740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 32241466 - 32241521
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||| |||||||  ||||||||||||| |||||||    
T  32241466 tatcataaatgcaaagtggaatataatgaattggaagttgtgaaagtaatattaat 32241521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 33190951 - 33191006
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||  ||||||||||||||  |||||||||||||||| ||||    
T  33190951 tatcataaatgcatagtggaatatattgaattggaagttgtgaaagtagtactaat 33191006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 37219805 - 37219860
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    |||||||||||  ||||| ||||||||| |||||| ||||||||||||| ||||||    
T  37219805 ttatcataaatataaagtgaaatatattaaattgaaagttgtgaaagtattattaa 37219860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 39171608 - 39171553
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||| ||||  ||||| ||||||||||    
T  39171608 tatcataaatgcaaagtggaatatattgaattgtgagtgatgaaaatagtattaat 39171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 44615411 - 44615462
Alignment:
Q  23 ataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||| |||||||||||||||||||  ||||| || |||||||    
T  44615411 ataaatgcaaagtagaatatattgaattgagagtgatgaaaataatattaat 44615462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 44790464 - 44790519
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| |||||  |||||||||||||| || | |||||||||||||||||    
T  44790464 tatcataaatgtaaagtggaatatattgaattgggaatggtgaaagtagtattaat 44790519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 33826297 - 33826244
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatt 71  Q
    |||||||||||| |||| | ||||||||||||||||| |  |||||||||||||    
T  33826297 ttatcataaatgtaaagcagaatatattgaattgagaatgatgaaagtagtatt 33826244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 38201431 - 38201488
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| || | |||||||||||| ||||  |||||||| |||||||    
T  38201431 tttatcataaatgcaaattagagtatattgaattgggagtaatgaaagtaatattaat 38201488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 38586015 - 38586067
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| |||||||| ||||||||||  |||||  |||||||||    
T  38586015 cataaatgcaaagtagaatatattaaattgagagtaatgaaatcagtattaat 38586067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 7992 - 8051
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  7992 tctttatcataaatgtaaagtaaaatatattgaattgagaattgtgaaagtagtattaat 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 34803749 - 34803804
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34803749 tatcataaatgcaaaataaaatatattgaattgagagttgtgaaagtagtattaat 34803804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 15371900 - 15371960
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  15371900 ttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaat 15371960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 15321262 - 15321322
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||    
T  15321262 ttctttatcataaatgcaaagtagaatatattgaattgagaatgttgaaagtagtattaat 15321322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 15351420 - 15351480
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||    
T  15351420 ttctttatcataaatgcaaggtagaatatattgaattgagagcggtgaaagtagtattaat 15351480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 33017981 - 33018041
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||||    
T  33017981 ttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaat 33018041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 33921506 - 33921566
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||    
T  33921506 ttctttatcataaatgtaaagtagaatatattgaattgggagttgtaaaagtagtattaat 33921566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 2310325 - 2310385
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||  ||||||||||||||||    
T  2310325 ttctttatcataaatgcaaggtataatatattgaattgggagtgatgaaagtagtattaat 2310385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 8232348 - 8232407
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||    
T  8232348 ttctttatcataaatgtaaagtaaa-tatattgaattgagacttgtgaaagtactattaat 8232407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 15325217 - 15325157
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||| |||||| ||||||||||    
T  15325217 ttctttatcgtaaatgcaaagtagaatatattggattgagagtggtgaaactagtattaat 15325157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 4552979 - 4552919
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| || |||||||| ||||| |||| ||||||||| |||||||    
T  4552979 ttctttatcataaatgcaaattagaatatattaaattgggagtggtgaaagtaatattaat 4552919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 15355645 - 15355590
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||  |||||||||||    
T  15355645 ttctttatcataaatccaaagtagaatataatgaattgagagtgttgaaagtagta 15355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 117143 - 117089
Alignment:
Q  20 atcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||| ||||||  |||||||||||||||||||  ||||||||||||||||    
T  117143 atcataaatacaaagtggaatatattgaattgagagtgatgaaagtagtattaat 117089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 3874083 - 3874145
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatta 72  Q
    |||||||||||||||||||| |||||  |||||||||||||  |||| ||||||||| |||||    
T  3874083 attattctttatcataaatgtaaagttgaatatattgaattaggagtagtgaaagtaatatta 3874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 8569787 - 8569836
Alignment:
Q  25 aaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||||||| |||||||||| ||||||||| |||||||    
T  8569787 aaatgcaaagtgaaatatattaaattgagagtggtgaaagtaatattaat 8569836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 3166145 - 3166205
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||   || | |||||||||||||||||    
T  3166145 ttctttatcataaatgtaaagtagaatatattgaatgaggattggtgaaagtagtattaat 3166205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 4238486 - 4238432
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||    
T  4238486 tatcataaatgtaaagtgaaatctattgaattgaaagttgtg-aagtagtattaat 4238432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 31265844 - 31265789
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| |||||  ||||||||||||||  ||||||||||||| |||||||    
T  31265844 tatcataaatgtaaagtggaatatattgaattggaagttgtgaaagtaatattaat 31265789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 3604647 - 3604697
Alignment:
Q  24 taaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||  ||||||||||||||  ||||||||||||| |||||||    
T  3604647 taaatgcaaagtggaatatattgaattggaagttgtgaaagtaatattaat 3604697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 26356333 - 26356279
Alignment:
Q  20 atcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||||||||||||||   |||  ||||||||||||||||    
T  26356333 atcataaatgcaaagtgaaatatattgaattagaagtgatgaaagtagtattaat 26356279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 31075965 - 31076019
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatta 72  Q
    ||||||||||| |||| || |||||||||||||| ||||  ||||||||||||||    
T  31075965 ttatcataaatacaaaatataatatattgaattgggagtgatgaaagtagtatta 31076019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 9354477 - 9354540
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatata---ttgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| | |||| ||||||   |||||||  ||||||||||||||||||||||    
T  9354477 ttctttatcataaatgtagagtagaatatactattgaattaggagttgtgaaagtagtattaat 9354540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 16126277 - 16126244
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattg 51  Q
    ||||||||||||||||||| ||||||||||||||    
T  16126277 ttatcataaatgcaaagtataatatattgaattg 16126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 46194244 - 46194303
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  46194244 tctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaat 46194303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 1923160 - 1923100
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  1923160 ttctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaat 1923100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 41287336 - 41287272
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |||||||    
T  41287336 attattctttatcataaatgtaaagtagaatatattgaattgagagttgtgaaattaatattaat 41287272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 53051093 - 53051036
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  53051093 tttatcataaatgtaaagtataatatattgaattgggagttgtgaaagtagtattaat 53051036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 1334818 - 1334878
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||||    
T  1334818 ttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaat 1334878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 32977827 - 32977887
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||    
T  32977827 ttctttatcataaatgtaatttagaatatattgaattgagagttgtgaaagtagtattaat 32977887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 39329791 - 39329847
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  39329791 ttatcataaatgcaaagtagaatatattgaattgagagtgatgaaagtagtattaat 39329847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 21296545 - 21296600
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  21296545 tatcataaatgcaaagtagaatatattgaattggaagttgtgaaagtagtattaat 21296600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 43639558 - 43639613
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  43639558 tatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtattaat 43639613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 29858893 - 29858962
Alignment:
Q  5 ggtagattattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||| ||| |||||||||||||||| |||||| |||||||||||||  |||| |||||||||||||||||    
T  29858893 ggtacattcttctttatcataaatgtaaagtagaatatattgaattatgagtggtgaaagtagtattaat 29858962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 48409659 - 48409594
Alignment:
Q  9 gattattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||| |||||||||||||||| |||||| ||||| |||||||| |||| |||||||||||||||||    
T  48409659 gattcttctttatcataaatgtaaagtagaatatgttgaattgggagtggtgaaagtagtattaat 48409594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 9218211 - 9218155
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||||    
T  9218211 ttatcataaatgcaaagtagaatataatgaattgagagtgatgaaagtagtattaat 9218155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 54122266 - 54122318
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatt 71  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  54122266 tatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtatt 54122318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 3862213 - 3862269
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||||||||| ||||||||||||  |||||||| |||||||    
T  3862213 ttatcataaatgcaaattaaaatatactgaattgagagtgatgaaagtaatattaat 3862269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 27668368 - 27668424
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| |||||||||||||| |||||  | ||||||||||||||    
T  27668368 ttatcataaatgcaaagtgaaatatattgaattaagagtgataaaagtagtattaat 27668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 53754101 - 53754161
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||| ||| | || ||||||||||||||    
T  53754101 ttctttatcataaatgtaaagtagaatatattgaattaagaatagtaaaagtagtattaat 53754161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 54021495 - 54021555
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||| ||||||| |||||| |||||||||||||  |||| |||||||||||||||||    
T  54021495 ttctttattataaatgtaaagtagaatatattgaattcggagtggtgaaagtagtattaat 54021555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 26134745 - 26134800
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||    
T  26134745 tatcataaatgcaaagtgaaatatattgaattgggagtgatgaaagtagtactaat 26134800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 35300703 - 35300652
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||||||||    
T  35300703 ttatcataaatgtaaagtaaaatatattgaatagagagtgatgaaagtagta 35300652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 51165022 - 51164967
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    |||||||||||||||| |||||| |||||||||||||  |||| ||||||||||||    
T  51165022 ttctttatcataaatgtaaagtagaatatattgaatttggagtagtgaaagtagta 51164967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 46786023 - 46786077
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    ||||||||||||||||| ||||||||||||||| |||   |||||||||||||||    
T  46786023 tatcataaatgcaaagtgaaatatattgaattgggagcgatgaaagtagtattaa 46786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 47496236 - 47496179
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||||  ||||||||||||| |||||  ||||||||||||||||    
T  47496236 tttatcataaatgtaaagtctaatatattgaattaagagtgatgaaagtagtattaat 47496179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 8498314 - 8498266
Alignment:
Q  24 taaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatta 72  Q
    |||||||| |||||||||||||||||||||||| || ||||||| ||||    
T  8498314 taaatgcagagtaaaatatattgaattgagagtggtaaaagtagaatta 8498266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 38600843 - 38600903
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||| |||||||| |||||| ||||||||||| || ||||  ||||||||||||||||    
T  38600843 ttctttaccataaatgtaaagtataatatattgaactgggagtgatgaaagtagtattaat 38600903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 42547147 - 42547203
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||  | |||||||||||||| ||||  ||||||||||||||||    
T  42547147 ttatcataaatgcaaaagagaatatattgaattgggagtgatgaaagtagtattaat 42547203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 46627966 - 46628022
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||| |||| |  | ||||||||||||||    
T  46627966 ttatcataaatgcaaagtataatatattgaatagagaatgataaaagtagtattaat 46628022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 5245477 - 5245422
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||| ||||||  |||||||||||||||||||  ||||||| ||||||||    
T  5245477 tatcataaatacaaagtggaatatattgaattgagagtgatgaaagtggtattaat 5245422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 15280670 - 15280615
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| |||||  |||||||||||||| ||||  ||||||||||||||||    
T  15280670 tatcataaatggaaagtggaatatattgaattgggagtgatgaaagtagtattaat 15280615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 32023147 - 32023198
Alignment:
Q  23 ataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||  |||||||||||||||||||  |||||||| |||||||    
T  32023147 ataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaat 32023198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 39866595 - 39866650
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||| ||||||||| ||||  ||||||| ||||||||    
T  39866595 tatcataaatgcaaagtgaaatacattgaattgtgagtgatgaaagtggtattaat 39866650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 49122174 - 49122225
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagt 68  Q
    |||||||||||||||||||| |||||||||||||  ||||  ||||||||||    
T  49122174 tttatcataaatgcaaagtagaatatattgaattatgagtgatgaaagtagt 49122225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 52325242 - 52325187
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||||||| |   |||||||||||||||    
T  52325242 tatcataaatgcaaagtggaatatattgaattgagaatgacgaaagtagtattaat 52325187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 53876478 - 53876525
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    ||||||||||| ||||| ||||||||||||||||||||  ||||||||    
T  53876478 tatcataaatgtaaagtgaaatatattgaattgagagtgatgaaagta 53876525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 7885803 - 7885753
Alignment:
Q  24 taaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||| ||||||||||||||  ||||||| ||||||||    
T  7885803 taaatgcaaagtataatacattgaattgagagtgatgaaagttgtattaat 7885753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 29361671 - 29361641
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattga 52  Q
    |||||||||||||||||||||||||||||||    
T  29361671 cataaatgcaaagtaaaatatattgaattga 29361641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 36097703 - 36097752
Alignment:
Q  25 aaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||  |||||||||||||||||||  |||||||| |||||||    
T  36097703 aaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaat 36097752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 21585447 - 21585507
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| ||| || ||||||||| ||||  ||| ||||||||| |||||||    
T  21585447 ttctttatcataaatgtaaaatagaatatattgtattggaagtggtgaaagtaatattaat 21585507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 26832133 - 26832081
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||| ||||||||| |||||  |||  ||||||||||||||||    
T  26832133 cataaatgcaaagtgaaatatattaaattggtagtgatgaaagtagtattaat 26832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 44219074 - 44219130
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||||| ||||||||||||||  |||  ||||| ||||||||||    
T  44219074 ttatcataaatacaaagtagaatatattgaattggaagtaatgaaaatagtattaat 44219130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 44234156 - 44234100
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||| |||||||||||| |||||||||||||||| | |  |||||||||| |||||    
T  44234156 ttatcgtaaatgcaaagtgaaatatattgaattgaaattgatgaaagtagtcttaat 44234100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 45746428 - 45746376
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| ||||||| || || |||||  ||||||||||||||||    
T  45746428 cataaatgcaaagtagaatatatggagttaagagtgatgaaagtagtattaat 45746376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 6437 - 6497
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  6437 ttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtaatattaat 6497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 10828 - 10888
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  10828 ttctttatcataaatgcaaagtaaaatatattgaattaggagtggtgaaagtagtattaat 10888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 9e-19; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 2849325 - 2849265
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  2849325 ttctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaat 2849265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 37264382 - 37264323
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  37264382 tctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaat 37264323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 45218195 - 45218253
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatta 72  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||    
T  45218195 ttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtatta 45218253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 9602928 - 9602871
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  9602928 tttatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaat 9602871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 9830499 - 9830442
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  9830499 tttatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaat 9830442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 29997066 - 29997126
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| |||||||||| ||| || |||||||||||||||||||    
T  29997066 ttctttatcataaatgcaaagtataatatattgagttgggaattgtgaaagtagtattaat 29997126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 38589804 - 38589744
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||||    
T  38589804 ttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaat 38589744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 32776053 - 32775995
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatta 72  Q
    |||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||    
T  32776053 ttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtatta 32775995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 5068334 - 5068395
Alignment:
Q  13 attctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||| |||||||    
T  5068334 attctttatcataaatgtaaagtagaatatattgaattaagagtggtgaaagtaatattaat 5068395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 21412076 - 21412132
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  21412076 tttatcataaatgtaaagtaaaatatattgaattgaga-tggtgaaagtagtattaat 21412132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 25778810 - 25778754
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||    
T  25778810 ttatcataaatgcaaagtaaaatatattgaattggaagtgatgaaagtagtattaat 25778754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 27337906 - 27337970
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||| || |||||| |||||||    
T  27337906 attattctttatcataaatgtaaagtataatatattgaattgggagtggtaaaagtaatattaat 27337970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 36070179 - 36070115
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| | |||||| |||||| ||||||||||||  ||||||||||||||||    
T  36070179 attattctttatcataaacgtaaagtagaatatactgaattgagagtgatgaaagtagtattaat 36070115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 37496438 - 37496494
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||    
T  37496438 ttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtagtattaat 37496494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 2842094 - 2842149
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||    
T  2842094 tatcataaatgcaaagtgaaatatattgaatttagagtgatgaaagtagtattaat 2842149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 10355773 - 10355832
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||||| ||||||||||||||||| | || |||||| |||||||    
T  10355773 tctttatcataaatgcaaagtagaatatattgaattgagaatggtaaaagtaatattaat 10355832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 38181916 - 38181971
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| || ||||||||||||||  |||||||||||||||||||||    
T  38181916 tatcataaatgcaaaatagaatatattgaattggaagttgtgaaagtagtattaat 38181971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 46095462 - 46095517
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||    
T  46095462 tatcataaatgcaaagtgaaatatattgaattgagagtgataaaagtagtattaat 46095517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 7425920 - 7425974
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    |||||||||||||||||  ||||||||||||||  ||||||||||||||||||||    
T  7425920 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtattaa 7425974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 6838132 - 6838083
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaa 63  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  6838132 ttctttatcataaatataaagtaaaatatattgaattgagagtggtgaaa 6838083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 32972062 - 32972115
Alignment:
Q  21 tcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||| |||||||    
T  32972062 tcataaatgcaaagtagaatatattgaattgtgagtggtgaaagtattattaat 32972115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 3667918 - 3667974
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||| |||||||||||||||||||  |||||||| |||||||    
T  3667918 ttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtaatattaat 3667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 14648960 - 14649016
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| ||| |||||||||||||||||||  |||||||| |||||||    
T  14648960 ttatcataaatgcaaggtagaatatattgaattgagagtgatgaaagtaatattaat 14649016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 24288493 - 24288433
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||| || |||||| ||| |||||||    
T  24288493 ttctttatcataaatgtaaagtagaatatattgaattgaaagctgtgaatgtaatattaat 24288433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 30462734 - 30462670
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||| ||||||||||||| ||| || |||||||||||||||||||  ||||| ||||||||||    
T  30462734 attattttttatcataaatgtaaaatataatatattgaattgagagtgatgaaattagtattaat 30462670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 34001900 - 34001956
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||||| ||  ||||||||||||||||    
T  34001900 ttatcataaatgcaaagtggaatatattgaattgagggtgatgaaagtagtattaat 34001956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 34064281 - 34064225
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||| |||||||||||||||||||  |||||||| |||||||    
T  34064281 ttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtaatattaat 34064225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 39343708 - 39343768
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||  |||| |||||| ||||||||||    
T  39343708 ttctttatcataaatgtaaagtagaatatattgaatttggagtggtgaaaatagtattaat 39343768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 47238287 - 47238227
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| || || ||||  ||||||| |||||||||||||||||    
T  47238287 ttctttatcataaatgcaaagtacaaaatgttgagatgagagtggtgaaagtagtattaat 47238227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 46288473 - 46288528
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||| ||||||||||  ||||||||||||||| |||| ||||||||||||||||    
T  46288473 tatcattaatgcaaagtggaatatattgaattgaaagttatgaaagtagtattaat 46288528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 1643381 - 1643435
Alignment:
Q  20 atcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||  |||||||| |||||| ||||| |||||||||||||||    
T  1643381 atcataaatgcaaagtggaatatattaaattgaaagttgggaaagtagtattaat 1643435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 6591582 - 6591638
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| ||||||||||||| |||||  |||| ||| |||||||    
T  6591582 ttatcataaatgcaaagtagaatatattgaattaagagtaatgaacgtaatattaat 6591638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 18731509 - 18731457
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    |||||||||||||||| |||||| ||||||||||||||  ||| |||||||||    
T  18731509 ttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagta 18731457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 25940790 - 25940846
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| || |||||||| |||| |||||  ||||||||||||||||    
T  25940790 ttatcataaatgcaaactagaatatattaaatttagagtgatgaaagtagtattaat 25940846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 28333237 - 28333181
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||| |||||||||||||| ||||  |||||||| |||||||    
T  28333237 ttatcataaatgtaaagtagaatatattgaattgggagtgatgaaagtaatattaat 28333181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 30659517 - 30659577
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||  |||||| |||||||||||||   ||| |||||||||||||||||    
T  30659517 ttctttatcataaatataaagtagaatatattgaatttgaagtggtgaaagtagtattaat 30659577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 43007964 - 43007904
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||  ||| || ||||||||||||||||||| |||||| || |||||||    
T  43007964 ttctttatcataaatttaaattagaatatattgaattgagagtggtgaaaataatattaat 43007904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 2211742 - 2211711
Alignment:
Q  23 ataaatgcaaagtaaaatatattgaattgaga 54  Q
    ||||||||||||||||||||||||||||||||    
T  2211742 ataaatgcaaagtaaaatatattgaattgaga 2211711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 29257612 - 29257557
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||| ||||  |||||||| |||||||    
T  29257612 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaat 29257557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 33584628 - 33584573
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| |  |||||||||||||| ||||  ||||||||||||||||    
T  33584628 tatcataaatgcaaaatggaatatattgaattgggagtgatgaaagtagtattaat 33584573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 33774085 - 33774140
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||| |||||||||  |||||| |||||||  |||||||||||||||||||||    
T  33774085 tatcatagatgcaaagtggaatatactgaattgtaagttgtgaaagtagtattaat 33774140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 19688025 - 19687975
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagt 68  Q
    ||||||||||||||||||| |||||||||||||| || |  ||||||||||    
T  19688025 ttatcataaatgcaaagtataatatattgaattgtgaatcatgaaagtagt 19687975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 35013965 - 35014019
Alignment:
Q  20 atcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||| ||||||| ||| ||||||||||||||||  ||||| ||||||||||    
T  35013965 atcataaaagcaaagtgaaaaatattgaattgagagtgatgaaattagtattaat 35014019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 29434624 - 29434677
Alignment:
Q  21 tcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||  |||||||||||||| || |  ||||||||||||||||    
T  29434624 tcataaatgcaaagtggaatatattgaattgtgaatgatgaaagtagtattaat 29434677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 27242775 - 27242807
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaattgaga 54  Q
    |||||||||||| ||||||||||||||||||||    
T  27242775 cataaatgcaaaataaaatatattgaattgaga 27242807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 30459136 - 30459092
Alignment:
Q  10 attattctttatcataaatgcaaagtaaaatatattgaattgaga 54  Q
    |||||||||||| ||||||| ||| || |||||||||||||||||    
T  30459136 attattctttataataaatgtaaaatagaatatattgaattgaga 30459092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 32346584 - 32346552
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaatt 50  Q
    |||||||||||||||||||||||||||| ||||    
T  32346584 ttatcataaatgcaaagtaaaatatattaaatt 32346552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 39498740 - 39498684
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| |||| || |||||||||||||| ||||  |||||||| |||||||    
T  39498740 ttatcataaattcaaaatataatatattgaattgggagtgatgaaagtaatattaat 39498684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 40023772 - 40023800
Alignment:
Q  22 cataaatgcaaagtaaaatatattgaatt 50  Q
    |||||||||||||||||||||||||||||    
T  40023772 cataaatgcaaagtaaaatatattgaatt 40023800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 9e-19; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 15898261 - 15898201
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  15898261 ttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 15898201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 13087780 - 13087839
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  13087780 tctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 13087839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 38978973 - 38978914
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  38978973 tctttatcataaatgcaaagtagaatatattaaattgagagttgtgatagtagtattaat 38978914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 8369739 - 8369794
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  8369739 tatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaat 8369794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 13016402 - 13016461
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||    
T  13016402 tctttatcataaatgcaaagtagaatatattgaattgggagtggtgaaagtaatattaat 13016461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 10044735 - 10044678
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||||| |||||||    
T  10044735 tttatcataaatgtaaagtaaagtatattgatttgagagttgtgaaagtaatattaat 10044678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 6173022 - 6173078
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  6173022 ttatcataaatgcaaagtataatatattgaattgtgagtgatgaaagtagtattaat 6173078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 25108643 - 25108583
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||  ||| |||||||||||||||||    
T  25108643 ttctttatcataaatgtaaagtataatatattgaattggaagtggtgaaagtagtattaat 25108583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 25111186 - 25111246
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||  ||| |||||||||||||||||    
T  25111186 ttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtattaat 25111246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 25167735 - 25167675
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||  ||| |||||||||||||||||    
T  25167735 ttctttatcataaatgtaaagtataatatattgaattggaagtggtgaaagtagtattaat 25167675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 25170277 - 25170337
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||||||  ||| |||||||||||||||||    
T  25170277 ttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtattaat 25170337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 31090374 - 31090314
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||| |||||||| ||||||| |||||||||||  ||||||||||||||||    
T  31090374 ttctttatcataaacgcaaagtagaatatatggaattgagagtgttgaaagtagtattaat 31090314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 39060992 - 39061052
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||| |||||||||||||  |||| ||||||||| |||||||    
T  39060992 ttctttatcataaatgcaaagtagaatatattgaattaggagtggtgaaagtaatattaat 39061052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 17242997 - 17243052
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||||||||  ||||||||||||||||    
T  17242997 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtagtattaat 17243052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 36446730 - 36446785
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| ||||||||||||||| |||  ||||||||||||||||    
T  36446730 tatcataaatgcaaagtataatatattgaattgaaagtgatgaaagtagtattaat 36446785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 42211398 - 42211343
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||    
T  42211398 tatcataaatgcaaagtgaaatatattgaattgtgagtgatgaaagtagtattaat 42211343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 42575681 - 42575736
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  ||||||||||||||  |||||||||||||||||||||    
T  42575681 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtattaat 42575736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 15564929 - 15564986
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||||| |||||||| ||||||||||  |||||||| |||||||    
T  15564929 tttatcataaatgcaaagtagaatatattaaattgagagtgatgaaagtaatattaat 15564986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 19889574 - 19889631
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||||| ||||||||||||||| ||| ||||||||| |||||||    
T  19889574 tttatcataaatgtaaagtagaatatattgaattgaaagtggtgaaagtaatattaat 19889631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 858401 - 858345
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| | ||||||||| ||||||||||  ||||||||||||||||    
T  858401 ttatcataaatgcaaaatgaaatatatttaattgagagtgatgaaagtagtattaat 858345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 7871383 - 7871324
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||| ||||| |||| |||||||||||||||||    
T  7871383 ttctttatcataaatgtaaagtagaatatattaaattg-gagtggtgaaagtagtattaat 7871324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 16883973 - 16884029
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| ||||||||||||||||||||  | || |||||||||||||||||    
T  16883973 ttatcataaatgtaaagtaaaatatattgaattaggggtggtgaaagtagtattaat 16884029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 25344780 - 25344836
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||| ||||||||||||||||| |  ||||||||||||||||    
T  25344780 ttatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaat 25344836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 39212593 - 39212649
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||||||||| |||   ||||||||||||||||    
T  39212593 ttatcataaatgcaaagtagaatatattgaattgggagcgatgaaagtagtattaat 39212649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 42818973 - 42818914
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||||| ||||||| |||||| ||||||||||    
T  42818973 ttctttatcataaatgtaaagtagaatatattgaa-tgagagtggtgaaaatagtattaat 42818914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 792045 - 791986
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||| ||||||||||| || |||||||||||||  |||| |||||||||||||||||    
T  792045 tctttattataaatgcaaaatagaatatattgaattatgagtggtgaaagtagtattaat 791986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 16926129 - 16926180
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagt 65  Q
    |||||||||||||||| |||||| ||||||||||||||  ||||||||||||    
T  16926129 ttctttatcataaatggaaagtagaatatattgaattggaagttgtgaaagt 16926180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 17699398 - 17699343
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| || ||| |||||||||||||||||||  ||||||||||||||||    
T  17699398 tatcataaatgtaaggtataatatattgaattgagagtaatgaaagtagtattaat 17699343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 31196389 - 31196334
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    |||||||| ||| |||||||||| ||||||||| ||||||||| ||||||||||||    
T  31196389 ttctttattatacatgcaaagtagaatatattggattgagagtggtgaaagtagta 31196334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 35334569 - 35334624
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||| ||||  ||||||||||||||||    
T  35334569 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaat 35334624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 35646132 - 35646187
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||   |||||||||||||||||||||    
T  35646132 tatcataaatgcaaagtggaatatattgaattagaagttgtgaaagtagtattaat 35646187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 36469137 - 36469192
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||| ||||||||||||| | |||  ||||||||||||||||    
T  36469137 tatcataaatgcaaagtataatatattgaattaaaagtgatgaaagtagtattaat 36469192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 39183670 - 39183725
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||||||||  |||||||| |||||||    
T  39183670 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaat 39183725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 146748 - 146797
Alignment:
Q  24 taaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    ||||||||||||| |||||||||||||||||||  | |||||||||||||    
T  146748 taaatgcaaagtagaatatattgaattgagagtgataaaagtagtattaa 146797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 43525545 - 43525488
Alignment:
Q  17 tttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||| |||||| ||||| ||||||||  ||| |||||||||||||||||    
T  43525545 tttatcataaatgtaaagtataatatgttgaattggaagtggtgaaagtagtattaat 43525488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 72147 - 72203
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||| |||||||| ||||  ||||  ||||||||||||||||    
T  72147 ttatcataaatgcaaagtagaatatattaaattaggagtgatgaaagtagtattaat 72203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 4044515 - 4044575
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||||||||||| | || |||||| || |||||||    
T  4044515 ttctttatcataaatgtaaagtagaatatattgaattgggtgtggtgaaaatattattaat 4044575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 5073016 - 5072960
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| ||||||||||||||||||||| |||   || |||||||||||||    
T  5073016 ttatcataaatgtaaagtaaaatatattgaattgggagcaatggaagtagtattaat 5072960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 5147534 - 5147570
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaatt 50  Q
    ||||||||||||||||||||||| |||||||||||||    
T  5147534 ttctttatcataaatgcaaagtagaatatattgaatt 5147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 5357855 - 5357915
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| ||||||||| ||||  ||| ||||||||| |||||||    
T  5357855 ttctttatcataaatgtaaagtagaatatattgtattggaagtggtgaaagtaatattaat 5357915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 7311222 - 7311270
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    ||||||||||||||||||| ||||||||||||| |||||  ||||||||    
T  7311222 ttatcataaatgcaaagtagaatatattgaattaagagtgatgaaagta 7311270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 16283630 - 16283678
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtag 67  Q
    |||||||||||||||||  |||||||||||||||||||  |||||||||    
T  16283630 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtag 16283678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 35988700 - 35988644
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||  |||||||||||||| |||| ||||||||  |||||||    
T  35988700 ttatcataaatgcaaagttgaatatattgaattgggagtggtgaaagtgatattaat 35988644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 42158688 - 42158724
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgaga 54  Q
    ||||||||||||||||||||||||| |||||||||||    
T  42158688 ttatcataaatgcaaagtaaaatatgttgaattgaga 42158724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 8692861 - 8692916
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| | ||||||||| |||||  ||||||||||||| |||||||    
T  8692861 tatcataaatgcaaaatgaaatatattaaattggaagttgtgaaagtaatattaat 8692916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 11099520 - 11099575
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||| ||||||  |||||||||||||| ||||  ||||||||||||||||    
T  11099520 tatcataaatacaaagtggaatatattgaattgggagtgatgaaagtagtattaat 11099575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 22582915 - 22582969
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  || |||||||||||  |||||||||||||||||||||    
T  22582915 tatcataaatgcaaagtggaa-atattgaattggaagttgtgaaagtagtattaat 22582969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 39008193 - 39008139
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||| ||||| |||||||||||||||  |||| ||||||||||||||||    
T  39008193 tatcataaatgtaaagtgaaatatattgaattggaagtt-tgaaagtagtattaat 39008139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 39035894 - 39035953
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| | |||||| ||||||||| |||||||||| || |||||||| |||||    
T  39035894 tctttatcataactacaaagtgaaatatattaaattgagagtggtaaaagtagttttaat 39035953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 22983010 - 22982957
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||||||||   | ||||||||||  ||||||||||||||||    
T  22983010 ttatcataaatgcaaagtaaaata---ttaattgagagtgatgaaagtagtattaat 22982957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 32659882 - 32659829
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatt 71  Q
    |||| |||||||||||||| ||||||||||||||||| | || |||||| ||||    
T  32659882 ttattataaatgcaaagtataatatattgaattgagactggtaaaagtaatatt 32659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 39060460 - 39060513
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtag 67  Q
    ||||||||||||||||||||||| | ||||||| ||||  ||| ||||||||||    
T  39060460 ttctttatcataaatgcaaagtagactatattgtattggaagtggtgaaagtag 39060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 20189958 - 20189902
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||| |||||  ||||||||||||||||| |  |||||||| |||||||    
T  20189958 ttatcataaatgtaaagtggaatatattgaattgagaatgatgaaagtaatattaat 20189902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 35585659 - 35585711
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtatt 71  Q
    |||||||||  |||||| ||||||||||||||||||||  |||||||| ||||    
T  35585659 tatcataaagacaaagtgaaatatattgaattgagagtgatgaaagtaatatt 35585711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 36006930 - 36006990
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |||||| |||||| |||||||  ||| |||||| || |||||||    
T  36006930 ttctttatcataaatgtaaagtagaatatactgaattggaagtggtgaaaataatattaat 36006990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 5887 - 5828
Alignment:
Q  15 tctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  5887 tctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaat 5828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 220063 - 220011
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagta 66  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  220063 ttctttatcataaatgcaaaatagaatatattgaattgagagtggtgaaagta 220011  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 352498 - 352557
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaa 73  Q
    |||||||||||||||| |||||| |||||||||||||| |||| ||||||||| ||||||    
T  352498 ttctttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagtaatattaa 352557  T

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Target: scaffold0262 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 12473 - 12533
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||| ||||||| |||||| ||||||||||||| ||| | |||||||||||||||||    
T  12473 ttctttattataaatgtaaagtagaatatattgaattaagaatggtgaaagtagtattaat 12533  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 229889 - 229833
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    ||||||||||||||||||   |||||||||||||  |||||||||||||||||||||    
T  229889 ttatcataaatgcaaagtggtatatattgaattggaagttgtgaaagtagtattaat 229833  T

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Target: scaffold0576 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 635 - 580
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagta 69  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||  |||||||||||    
T  635 ttctttatcataaatccaaagtagaatataatgaattgagagtgttgaaagtagta 580  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 26678 - 26623
Alignment:
Q  19 tatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||||  |||||||||||||| ||||  ||||||||||||||||    
T  26678 tatcataaatgcaaagtggaatatattgaattgcgagtgatgaaagtagtattaat 26623  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 230322 - 230266
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||||||||||||||| |  ||||||||||||||  ||||||||||||| |||||||    
T  230322 ttatcataaatgcaaaatggaatatattgaattggaagttgtgaaagtaatattaat 230266  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 394848 - 394788
Alignment:
Q  14 ttctttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaat 74  Q
    |||| |||||||||| ||||||  |||||| ||||||||||||  ||||||||||||||||    
T  394848 ttctctatcataaatacaaagtggaatatagtgaattgagagtgatgaaagtagtattaat 394788  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 171292 - 171235
Alignment:
Q  18 ttatcataaatgcaaagtaaaatatattgaattgagagttgtgaaagtagtattaata 75  Q
    |||||||||||| |||||| |||||||||||||  ||||  |||||||| ||||||||    
T  171292 ttatcataaatgtaaagtagaatatattgaattaggagtgatgaaagtaatattaata 171235  T

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