View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13715_high_8 (Length: 519)
Name: NF13715_high_8
Description: NF13715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13715_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 19 - 511
Target Start/End: Original strand, 982685 - 983181
Alignment:
| Q |
19 |
tacaatgcatcatgcatgaatagaaacaac----tatatagaataaacagtaatgaatttagtagggttaatacatgtttacctgtcatcattattctct |
114 |
Q |
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| T |
982685 |
tacaatgcatcatgcatgaatagaaacaaccaagtatatagaacaaataataatgaatttagtagggttaatacatgtttacatgtcatcattattctct |
982784 |
T |
|
| Q |
115 |
tatcaatcaaatcaaaccataattaaaagaaaaagatcaagtctactgattcacccttcaactctcaaacaattcttcaacccagagttaactcagtcaa |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
982785 |
tatcaatcaaatcaaaccataattaaaagaaaaagatcatgtctattgattcacccttcaactctcaaacaattcttcaacccagagttaactcagtcag |
982884 |
T |
|
| Q |
215 |
gctttcaaaaatcgttcgatgcaacaagtctctcaaccgacctccatgtgattatgttataatgttgtatgttgtgttcactgattgagattgttctata |
314 |
Q |
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||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
982885 |
gctttcagaaatcattcgatgcaacaagtctctcaaccgacctccacgtgattatgttataatgttgtatgttgtgttcactgattgagattgttctata |
982984 |
T |
|
| Q |
315 |
ttgtacattaatgagtttatacatgtgtgaactgaattggtatggtaaattaatgagtttatgcgtgcgtgaactgaactgctatggtaaattaattata |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |
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| T |
982985 |
ttgtacattaatgagtttatacatgtgtgaactgaattggtatggtaaattaatgagtttatgcgtgcatgaactgaactgctatggtaaattaataata |
983084 |
T |
|
| Q |
415 |
tagtacaagtttgtacaagaaaaaatatagtacaatttaaacatttgctacaaaataaagtatataggtattttatgtggcaaacagttgatgatgt |
511 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
983085 |
tagtacaagtttgtacaagaaaaaatatagtacagtttaaacatttgctacaaaataaagtatataggtattttatgtggcaaacagttgatgatgt |
983181 |
T |
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