View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13716_low_13 (Length: 270)
Name: NF13716_low_13
Description: NF13716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13716_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 33263088 - 33263344
Alignment:
| Q |
1 |
ccaaaatacatgtagttagataatgggaaaaataaattttgaaaggnnnnnnnggcattatatcttttggaacaacccagcaggcacttcacctttacac |
100 |
Q |
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| T |
33263088 |
ccaaaatacatgtagttagataatgggaaaaataaattttgaaaggaaaaaaaggcattatatcttttggaacaacccagcaggcacttcacctttacac |
33263187 |
T |
|
| Q |
101 |
atgatgtttgcctaccaaaccctttccaagtttatgctaccaaacccgctcttacaccgttcgttttgtattgagaaatgtcacactttattacatgtat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
33263188 |
atgatgtttgcctaccaaaccctttccaagtttatgctaccaaaccctctcttacaccgttcgttttgtattgagaaatgtcacactttattacatggat |
33263287 |
T |
|
| Q |
201 |
ttaatttatatatattgatagtgttcataattacatggatttaatttggattatatg |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33263288 |
ttaatttatatatattgatagtgttcataattacatggatttaatttggattatatg |
33263344 |
T |
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