View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13717_low_10 (Length: 452)
Name: NF13717_low_10
Description: NF13717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13717_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 1 - 440
Target Start/End: Original strand, 12571117 - 12571556
Alignment:
| Q |
1 |
tctcattggatgagaattcatactatggcgaagaatataaagctgacgataaggaagaggaggaccaaaaaactgaagaacaagattggattgaggaaag |
100 |
Q |
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| T |
12571117 |
tctcattggatgagaattcatactatggcgaagaatataaagacgacgataaggaagagaaggaccaaaaaaccgaagaacaagattggattgaggaaag |
12571216 |
T |
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| Q |
101 |
ggcaaagcaattactacatattgtcaaagcaacaagttcatcggtgcaaagttgcgacgacaatttagatatagttctgctggaatttttcaaggaagaa |
200 |
Q |
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| T |
12571217 |
ggcaaagcaattactacatattgtcaaagcaacaagttcatcggtgcaaaattgcgacgacaatttagatatagttctgctggaatttttcaaggaagaa |
12571316 |
T |
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| Q |
201 |
ctaagtggtaatagaaaccaaaagaggaataatgaggggcttgagttggagataatgaaaattgctgaggattggataaatgagtcatttgaaaaagctt |
300 |
Q |
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| T |
12571317 |
ctaagtggtaatagaaaccaaaagaggaataatgaggggcttgagttggagataatgaaaattgctgaggattggataaatgagtcatttgaaaaagctt |
12571416 |
T |
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| Q |
301 |
atgatattgtgcatgttaataaagatgcttatatcaaggagatggataggagaggtggatggagtaggtttgttgaggagcaagatgagttggttatgga |
400 |
Q |
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| T |
12571417 |
atgatattgtgcatgttaataaagatgcttatatcaaggagatggataggagaggtggatggagtaggtttgatgaggagcaagatgagttggttatgga |
12571516 |
T |
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| Q |
401 |
gattgaggcagctatattccatagtttgattgatgatatt |
440 |
Q |
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| T |
12571517 |
gattgaggcagctatattacaaagtttgattgatgatatt |
12571556 |
T |
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