View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13717_low_22 (Length: 219)
Name: NF13717_low_22
Description: NF13717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13717_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 17104529 - 17104746
Alignment:
| Q |
1 |
tcaccgactatggttcacctgaagagttcctatccaaggttttaaaaatctcaacttttgtcttcatttgtgcttatactaaaattttgataaaatcatt |
100 |
Q |
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| T |
17104529 |
tcaccgactatggttcacctgaagagttcctatccaaggttttaaaaatctcaacttttttcttcatttgtgtttacactaaaattttgataaaatcatt |
17104628 |
T |
|
| Q |
101 |
aatatatattttacaaccgttttcgatggaattcaaactcttcccttaatgttacaggaacannnnnnnaccactgagctcacaccttatgaacatatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
17104629 |
aatatatattttacaaccgttttcgatggaattcaaactcttcccttaatgttacaggaacaattttttaccactgagctcacaccttatgaacatatat |
17104728 |
T |
|
| Q |
201 |
tttattacatattatctg |
218 |
Q |
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|||||||||||||||||| |
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| T |
17104729 |
tttattacatattatctg |
17104746 |
T |
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