View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1371_low_37 (Length: 419)

Name: NF1371_low_37
Description: NF1371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1371_low_37
NF1371_low_37
[»] chr7 (31 HSPs)
chr7 (71-239)||(4903050-4903219)
chr7 (71-232)||(4906435-4906596)
chr7 (359-419)||(19590525-19590585)
chr7 (356-419)||(19591010-19591073)
chr7 (356-419)||(38859126-38859189)
chr7 (357-419)||(2658837-2658899)
chr7 (357-419)||(35289386-35289448)
chr7 (358-419)||(37786766-37786827)
chr7 (359-419)||(35288903-35288963)
chr7 (75-130)||(4929364-4929419)
chr7 (356-419)||(37787252-37787315)
chr7 (75-145)||(4924029-4924099)
chr7 (357-419)||(19830418-19830480)
chr7 (357-419)||(32004612-32004674)
chr7 (357-419)||(34533789-34533851)
chr7 (358-419)||(19830904-19830965)
chr7 (356-419)||(2659325-2659388)
chr7 (357-419)||(4478185-4478247)
chr7 (362-419)||(4641443-4641500)
chr7 (358-419)||(38858642-38858703)
chr7 (359-419)||(32005099-32005159)
chr7 (357-416)||(34534279-34534338)
chr7 (356-419)||(38160948-38161011)
chr7 (75-141)||(5823048-5823114)
chr7 (357-419)||(28583437-28583499)
chr7 (362-419)||(29100336-29100393)
chr7 (356-419)||(23952727-23952791)
chr7 (360-419)||(28584407-28584466)
chr7 (372-419)||(29099863-29099910)
chr7 (362-419)||(4641929-4641983)
chr7 (365-419)||(23953214-23953268)
[»] chr2 (36 HSPs)
chr2 (237-358)||(16194936-16195057)
chr2 (356-417)||(26538566-26538627)
chr2 (356-415)||(239350-239409)
chr2 (356-419)||(18451316-18451379)
chr2 (356-419)||(20440516-20440579)
chr2 (357-419)||(11091005-11091067)
chr2 (357-419)||(22374318-22374380)
chr2 (358-419)||(18450829-18450890)
chr2 (358-419)||(20444748-20444809)
chr2 (358-419)||(40027139-40027200)
chr2 (359-419)||(28616613-28616673)
chr2 (352-419)||(40815338-40815405)
chr2 (356-419)||(43058817-43058880)
chr2 (357-419)||(1978106-1978168)
chr2 (357-419)||(1978594-1978656)
chr2 (357-419)||(11090519-11090581)
chr2 (357-419)||(22374810-22374872)
chr2 (358-419)||(26538096-26538157)
chr2 (358-419)||(28617099-28617160)
chr2 (362-419)||(40027625-40027682)
chr2 (360-419)||(239837-239896)
chr2 (356-419)||(40815830-40815893)
chr2 (357-419)||(28847180-28847242)
chr2 (362-419)||(14432145-14432202)
chr2 (356-419)||(3025463-3025526)
chr2 (356-419)||(7446831-7446894)
chr2 (360-419)||(35781148-35781207)
chr2 (358-419)||(7446341-7446402)
chr2 (359-415)||(35779708-35779764)
chr2 (359-415)||(43058333-43058389)
chr2 (356-415)||(14432630-14432689)
chr2 (361-419)||(8972239-8972297)
chr2 (362-419)||(8425845-8425902)
chr2 (359-419)||(3025947-3026006)
chr2 (362-410)||(8425358-8425406)
chr2 (361-415)||(15551501-15551555)
[»] chr4 (43 HSPs)
chr4 (357-419)||(25447721-25447783)
chr4 (356-419)||(23494928-23494991)
chr4 (357-419)||(15523233-15523295)
chr4 (356-419)||(12234326-12234389)
chr4 (358-419)||(15523719-15523780)
chr4 (359-415)||(11153636-11153692)
chr4 (359-419)||(22434179-22434239)
chr4 (359-419)||(25447247-25447307)
chr4 (359-419)||(46193405-46193465)
chr4 (356-419)||(25937667-25937730)
chr4 (353-419)||(20470996-20471062)
chr4 (361-419)||(46193890-46193948)
chr4 (357-419)||(51021280-51021342)
chr4 (358-419)||(16318261-16318322)
chr4 (358-419)||(25938156-25938217)
chr4 (359-419)||(45082909-45082969)
chr4 (356-419)||(4220044-4220107)
chr4 (356-419)||(18764005-18764068)
chr4 (356-415)||(22434665-22434724)
chr4 (361-419)||(2118295-2118353)
chr4 (361-415)||(4219559-4219613)
chr4 (361-419)||(23494445-23494503)
chr4 (357-419)||(33109949-33110011)
chr4 (361-419)||(38962304-38962362)
chr4 (357-419)||(54995552-54995614)
chr4 (358-419)||(10258372-10258433)
chr4 (359-419)||(12234814-12234874)
chr4 (359-419)||(35363086-35363146)
chr4 (360-419)||(20958344-20958403)
chr4 (356-419)||(51020794-51020857)
chr4 (362-412)||(2118787-2118837)
chr4 (361-419)||(33109686-33109744)
chr4 (357-419)||(54995067-54995129)
chr4 (358-419)||(11153145-11153206)
chr4 (362-419)||(18751602-18751659)
chr4 (362-419)||(48526666-48526723)
chr4 (357-413)||(48293592-48293648)
chr4 (360-419)||(44890518-44890577)
chr4 (357-419)||(48708293-48708355)
chr4 (358-419)||(48526195-48526256)
chr4 (358-404)||(22170436-22170482)
chr4 (359-415)||(16691560-16691616)
chr4 (359-415)||(48295032-48295088)
[»] chr6 (32 HSPs)
chr6 (356-419)||(12935154-12935217)
chr6 (356-419)||(22219838-22219901)
chr6 (357-419)||(20741098-20741160)
chr6 (358-419)||(23073998-23074059)
chr6 (356-415)||(11445476-11445535)
chr6 (357-419)||(1149463-1149525)
chr6 (357-419)||(18257135-18257197)
chr6 (357-419)||(23075613-23075675)
chr6 (362-419)||(10899942-10899999)
chr6 (359-419)||(11277067-11277127)
chr6 (356-416)||(11444984-11445044)
chr6 (356-419)||(2319669-2319732)
chr6 (357-415)||(12935646-12935704)
chr6 (358-419)||(15828126-15828187)
chr6 (362-415)||(18504922-18504975)
chr6 (358-419)||(20741589-20741650)
chr6 (359-419)||(10900415-10900475)
chr6 (359-419)||(18257622-18257682)
chr6 (356-415)||(28472634-28472693)
chr6 (356-415)||(29859823-29859882)
chr6 (358-419)||(31470314-31470375)
chr6 (359-419)||(1149917-1149977)
chr6 (360-419)||(15827639-15827698)
chr6 (360-419)||(18505404-18505463)
chr6 (360-419)||(31470801-31470860)
chr6 (361-419)||(29033436-29033494)
chr6 (362-415)||(2322707-2322760)
chr6 (359-419)||(4811372-4811432)
chr6 (359-415)||(22534214-22534270)
chr6 (361-419)||(29035122-29035180)
chr6 (362-415)||(3835215-3835268)
chr6 (359-407)||(4811753-4811801)
[»] chr5 (31 HSPs)
chr5 (356-419)||(18183454-18183517)
chr5 (357-419)||(2865240-2865302)
chr5 (357-419)||(19359621-19359683)
chr5 (359-419)||(5819414-5819474)
chr5 (356-419)||(8647923-8647986)
chr5 (356-419)||(15372358-15372421)
chr5 (357-419)||(5818927-5818989)
chr5 (357-419)||(24362321-24362383)
chr5 (358-419)||(16018588-16018649)
chr5 (359-419)||(164191-164251)
chr5 (359-415)||(8647438-8647494)
chr5 (359-419)||(19359136-19359196)
chr5 (356-419)||(24331556-24331619)
chr5 (357-419)||(8460928-8460990)
chr5 (357-419)||(18182968-18183030)
chr5 (358-419)||(8461416-8461477)
chr5 (358-419)||(29455227-29455288)
chr5 (355-419)||(14215728-14215792)
chr5 (356-419)||(15708968-15709031)
chr5 (359-419)||(7349502-7349562)
chr5 (358-410)||(25000583-25000635)
chr5 (357-406)||(14464018-14464067)
chr5 (358-419)||(29454739-29454800)
chr5 (359-415)||(4623148-4623204)
chr5 (361-409)||(14215243-14215291)
chr5 (359-419)||(15709453-15709513)
chr5 (360-419)||(4222207-4222266)
chr5 (361-419)||(2864756-2864814)
chr5 (357-419)||(16019072-16019134)
chr5 (359-415)||(4219663-4219719)
chr5 (359-419)||(7348559-7348619)
[»] scaffold0951 (2 HSPs)
scaffold0951 (353-419)||(2152-2218)
scaffold0951 (357-419)||(1665-1727)
[»] scaffold0273 (1 HSPs)
scaffold0273 (357-419)||(4692-4754)
[»] chr8 (26 HSPs)
chr8 (357-419)||(41681132-41681194)
chr8 (356-419)||(11656452-11656515)
chr8 (356-419)||(19176287-19176350)
chr8 (356-419)||(19176775-19176838)
chr8 (356-419)||(34541033-34541096)
chr8 (358-419)||(9930142-9930203)
chr8 (358-419)||(13225124-13225185)
chr8 (351-419)||(12571855-12571923)
chr8 (359-419)||(41681619-41681679)
chr8 (352-419)||(31133213-31133280)
chr8 (360-419)||(31133705-31133764)
chr8 (356-419)||(33742919-33742982)
chr8 (357-419)||(11337007-11337069)
chr8 (358-411)||(11656950-11657003)
chr8 (358-419)||(44831246-44831307)
chr8 (350-419)||(44831730-44831799)
chr8 (363-419)||(13224645-13224700)
chr8 (359-417)||(9178122-9178180)
chr8 (362-419)||(9928912-9928969)
chr8 (362-419)||(33328161-33328218)
chr8 (357-419)||(4629795-4629857)
chr8 (358-404)||(8074051-8074097)
chr8 (362-419)||(12572336-12572393)
chr8 (362-414)||(4630276-4630328)
chr8 (357-392)||(9177665-9177700)
chr8 (356-404)||(43958206-43958254)
[»] chr3 (47 HSPs)
chr3 (357-419)||(31779137-31779199)
chr3 (355-415)||(20840556-20840616)
chr3 (359-419)||(32535448-32535508)
chr3 (359-419)||(39556062-39556122)
chr3 (356-419)||(17464488-17464551)
chr3 (356-419)||(43973925-43973988)
chr3 (358-415)||(39555577-39555634)
chr3 (356-419)||(5137466-5137529)
chr3 (356-415)||(24301045-24301104)
chr3 (356-419)||(26837840-26837903)
chr3 (356-419)||(29801901-29801964)
chr3 (356-419)||(30104479-30104542)
chr3 (356-415)||(48452986-48453045)
chr3 (360-419)||(51473429-51473488)
chr3 (357-419)||(4275849-4275911)
chr3 (358-415)||(20841050-20841107)
chr3 (358-419)||(31778652-31778713)
chr3 (359-419)||(25853234-25853294)
chr3 (359-419)||(29801356-29801416)
chr3 (359-419)||(37727415-37727475)
chr3 (358-415)||(23644461-23644518)
chr3 (362-419)||(25612462-25612519)
chr3 (358-415)||(27393660-27393717)
chr3 (358-415)||(27394066-27394123)
chr3 (358-419)||(30098248-30098309)
chr3 (362-419)||(41046703-41046760)
chr3 (359-419)||(23644950-23645010)
chr3 (357-419)||(5136978-5137040)
chr3 (357-415)||(37222060-37222118)
chr3 (362-419)||(24300560-24300616)
chr3 (362-415)||(32534962-32535015)
chr3 (358-419)||(37726928-37726989)
chr3 (359-419)||(23228492-23228552)
chr3 (363-418)||(22425299-22425354)
chr3 (356-419)||(51474819-51474882)
chr3 (357-419)||(26837358-26837420)
chr3 (357-403)||(45965936-45965982)
chr3 (359-404)||(43973441-43973486)
chr3 (358-410)||(17464986-17465038)
chr3 (359-419)||(50116894-50116954)
chr3 (356-419)||(22424811-22424874)
chr3 (357-400)||(37220555-37220598)
chr3 (361-410)||(25853721-25853770)
chr3 (362-419)||(26274570-26274627)
chr3 (362-419)||(41047183-41047239)
chr3 (356-412)||(52375824-52375880)
chr3 (356-412)||(55390090-55390146)
[»] scaffold0295 (2 HSPs)
scaffold0295 (356-419)||(4790-4853)
scaffold0295 (361-419)||(5276-5334)
[»] chr1 (35 HSPs)
chr1 (360-419)||(8678542-8678601)
chr1 (357-419)||(18984117-18984179)
chr1 (361-419)||(33144404-33144462)
chr1 (357-419)||(50970276-50970338)
chr1 (358-419)||(5540303-5540364)
chr1 (358-419)||(39154505-39154566)
chr1 (358-419)||(50970763-50970824)
chr1 (359-419)||(8679026-8679086)
chr1 (360-419)||(4636456-4636515)
chr1 (360-419)||(5539817-5539876)
chr1 (356-419)||(9018970-9019033)
chr1 (357-415)||(15173582-15173640)
chr1 (357-419)||(15646190-15646252)
chr1 (362-419)||(15173099-15173156)
chr1 (358-419)||(15646680-15646741)
chr1 (358-419)||(18984604-18984665)
chr1 (358-419)||(29869619-29869680)
chr1 (359-419)||(29307427-29307487)
chr1 (359-415)||(29870108-29870164)
chr1 (367-419)||(33143925-33143977)
chr1 (356-419)||(2733442-2733505)
chr1 (356-419)||(21856039-21856102)
chr1 (361-419)||(17433700-17433758)
chr1 (362-419)||(5963063-5963120)
chr1 (358-419)||(52268289-52268350)
chr1 (359-415)||(21856532-21856588)
chr1 (359-415)||(26859059-26859115)
chr1 (359-419)||(29306953-29307013)
chr1 (360-419)||(5962579-5962638)
chr1 (356-415)||(9019452-9019511)
chr1 (357-419)||(26859544-26859606)
chr1 (361-419)||(47826966-47827024)
chr1 (361-419)||(39154021-39154079)
chr1 (359-407)||(17433216-17433264)
chr1 (350-419)||(47827073-47827141)
[»] scaffold1223 (2 HSPs)
scaffold1223 (361-419)||(755-813)
scaffold1223 (359-419)||(1226-1286)
[»] scaffold0417 (2 HSPs)
scaffold0417 (359-419)||(11108-11168)
scaffold0417 (381-419)||(10643-10681)
[»] scaffold0176 (2 HSPs)
scaffold0176 (359-419)||(19106-19166)
scaffold0176 (358-419)||(18834-18895)
[»] scaffold0019 (1 HSPs)
scaffold0019 (356-419)||(134158-134221)
[»] scaffold0113 (1 HSPs)
scaffold0113 (358-419)||(28728-28789)
[»] scaffold0007 (2 HSPs)
scaffold0007 (362-419)||(64790-64847)
scaffold0007 (358-419)||(64301-64362)
[»] scaffold0432 (2 HSPs)
scaffold0432 (362-419)||(9935-9992)
scaffold0432 (362-409)||(10367-10414)
[»] scaffold0076 (1 HSPs)
scaffold0076 (362-419)||(8494-8551)
[»] scaffold1585 (1 HSPs)
scaffold1585 (360-419)||(568-627)
[»] scaffold0057 (2 HSPs)
scaffold0057 (357-415)||(61026-61084)
scaffold0057 (362-419)||(61943-62000)
[»] scaffold0027 (2 HSPs)
scaffold0027 (356-419)||(42643-42706)
scaffold0027 (362-415)||(42172-42225)
[»] scaffold1696 (1 HSPs)
scaffold1696 (363-410)||(454-500)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 4903219 - 4903050
Alignment:
Q  71 agctatgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcagattgtgggaaaagtaatggtgatttttaactttttccaacc 170  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4903219 agctatgggtgaggttgaggtcgaacttgagcatgctctagcactgcaggaggaagcagattgtgggaaaagtaatggtgatttttaactttttccaacc 4903120  T
Q  171 atcaattctacctagttaaccaccgtaagc-tccaatttgggatgagaataaattttatggattcctttt 239  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  4903119 atcaattctacctagttaaccactgtaagcttccaatttgggatgagaataaattttatggattcctttt 4903050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 4906596 - 4906435
Alignment:
Q  71 agctatgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcagattgtgggaaaagtaatggtgatttttaactttttccaacc 170  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |    
T  4906596 agctatgggtgaggttgaggtcgaacttgagcatgctctggaactgcaggaggaagcagattgtggaaaaagtaatgatgatttttacctttttccaagc 4906497  T
Q  171 atcaattctacctagttaaccaccgtaagctccaatttgggatgagaataaattttatggat 232  Q
    | || ||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  4906496 accagttctacctaattaaccacggtaagctcccatttgggctgagaataaattttatggat 4906435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 19590525 - 19590585
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 19590585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 19591073 - 19591010
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  19591073 ttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttt 19591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 38859189 - 38859126
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  38859189 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttt 38859126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 2658837 - 2658899
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttt 2658899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 35289448 - 35289386
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttt 35289386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 37786766 - 37786827
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttt 37786827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 35288903 - 35288963
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttt 35288963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 4929364 - 4929419
Alignment:
Q  75 atgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcaga 130  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4929364 atgggtgaggttgaggttgaacttgagcatgctctagcactgcaggaggaagcaga 4929419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 37787315 - 37787252
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  37787315 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttt 37787252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 4924029 - 4924099
Alignment:
Q  75 atgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcagattgtgggaaaagtaa 145  Q
    ||||||||||||||||| ||||||||| ||||| | ||||||||||||||||||||| ||||| |||||||    
T  4924029 atgggtgaggttgaggttgaacttgagcatgctttggcactgcaggaggaagcagatcgtggggaaagtaa 4924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 19830418 - 19830480
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttt 19830480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 32004612 - 32004674
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| || |||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttt 32004674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 34533789 - 34533851
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttt 34533851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 19830965 - 19830904
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttt 19830904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 2659388 - 2659325
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||| ||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttt 2659325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 4478247 - 4478185
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||| |||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttt 4478185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 4641443 - 4641500
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||| ||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttt 4641500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 38858642 - 38858703
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| ||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttt 38858703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 32005159 - 32005099
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| || ||||||||| || |||||||||||||| ||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttt 32005099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 34534338 - 34534279
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgccc 416  Q
    |||||||||||| |||||||||  ||||||||||||||| ||||||||||| ||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgccc 34534279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 38160948 - 38161011
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||| |  |||||||||||    
T  38160948 ttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttt 38161011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 5823048 - 5823114
Alignment:
Q  75 atgggtgaggttgaggtcgaacttgagaatgctctagcactgcaggaggaagcagattgtgggaaaa 141  Q
    ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||| |||||  ||||||||    
T  5823048 atgggcgaggttgaggttgaactcgagcatgctctagcactgcaggaggaaacagatgatgggaaaa 5823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 28583437 - 28583499
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| || | |||| |||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttt 28583499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 29100393 - 29100336
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||| ||| |||| ||| ||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttt 29100336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 23952727 - 23952791
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttg-gcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||  |||| |||||||| ||||| ||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttt 23952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 28584466 - 28584407
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||| ||||| || |||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttt 28584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 29099863 - 29099910
Alignment:
Q  372 ttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttt 29099910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 4641983 - 4641929
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| ||||   |||||||||| |||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttt 4641929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 419
Target Start/End: Complemental strand, 23953268 - 23953214
Alignment:
Q  365 attacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||| |||||||| ||||||||||  ||| ||||||||||||||| |||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgcccttt 23953214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 16194936 - 16195057
Alignment:
Q  237 tttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaacccaatttagttaaggaagaccaggtatttcatgta 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16194936 tttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaacccaatttagttaaggaagactaggtatttcatgta 16195035  T
Q  337 agtgtaacatgtattaaactta 358  Q
    ||||||||||||||||||||||    
T  16195036 agtgtaacatgtattaaactta 16195057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 356 - 417
Target Start/End: Complemental strand, 26538627 - 26538566
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgccct 417  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  26538627 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccct 26538566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 239350 - 239409
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc 239409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 18451379 - 18451316
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  18451379 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttt 18451316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 20440579 - 20440516
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  20440579 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttt 20440516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 11091067 - 11091005
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttt 11091005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 22374318 - 22374380
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttt 22374380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 18450829 - 18450890
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttt 18450890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 20444748 - 20444809
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttt 20444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 40027139 - 40027200
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttt 40027200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 28616613 - 28616673
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttt 28616673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 419
Target Start/End: Original strand, 40815338 - 40815405
Alignment:
Q  352 aaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||| | ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  40815338 aaactttgtcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttt 40815405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 43058880 - 43058817
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||    
T  43058880 ttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttt 43058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 1978106 - 1978168
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttt 1978168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 1978656 - 1978594
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttt 1978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 11090519 - 11090581
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttt 11090581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 22374872 - 22374810
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttt 22374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 26538096 - 26538157
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttt 26538157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 28617160 - 28617099
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttt 28617099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 40027682 - 40027625
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttt 40027625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 239896 - 239837
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttt 239837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 40815893 - 40815830
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||    
T  40815893 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttt 40815830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 28847242 - 28847180
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||| ||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttt 28847180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 14432145 - 14432202
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttt 14432202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 3025463 - 3025526
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||| || |||||| |||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttt 3025526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 7446894 - 7446831
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||| ||||| || |||||||||| | || |||||||||||||||||||||||    
T  7446894 ttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttt 7446831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 35781207 - 35781148
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| ||||| ||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttt 35781148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 7446341 - 7446402
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| || ||||||||||| ||| ||| |||| ||||||||||||||    
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttt 7446402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 35779708 - 35779764
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||| |||||||||| | || |||||||| ||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgcc 35779764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 43058333 - 43058389
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||| || ||||||||||||| | |||| ||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcc 43058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 14432689 - 14432630
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||| |||||||||| |||||||| ||||||||||||||| ||| |||||||||| ||||    
T  14432689 ttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgcc 14432630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 8972239 - 8972297
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| |||||||||||| |  |||||||| ||||| ||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgcccttt 8972297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 8425902 - 8425845
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||  | ||||||||| ||| |||||||| ||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttt 8425845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 3026006 - 3025947
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||| |||||||| |||||||||||| || |||||||| |||| |||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttt 3025947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 410
Target Start/End: Original strand, 8425358 - 8425406
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtc 410  Q
    |||||||||||||||||| | ||||||||||||| |||||||| |||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtc 8425406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 15551501 - 15551555
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||| |||||||||||  || |||||||| ||||| ||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcc 15551555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 25447783 - 25447721
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttt 25447721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 23494991 - 23494928
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 23494928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 15523233 - 15523295
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 15523295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 12234326 - 12234389
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttt 12234389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 15523780 - 15523719
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttt 15523719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 11153692 - 11153636
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 11153636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 22434179 - 22434239
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttt 22434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 25447247 - 25447307
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttt 25447307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 46193405 - 46193465
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttt 46193465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 25937667 - 25937730
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  25937667 ttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttt 25937730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 20471062 - 20470996
Alignment:
Q  353 aacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| | ||||||    
T  20471062 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttt 20470996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 46193948 - 46193890
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttt 46193890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 51021342 - 51021280
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttt 51021280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 16318322 - 16318261
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttt 16318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 25938217 - 25938156
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttt 25938156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 45082969 - 45082909
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttt 45082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 4220107 - 4220044
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||    
T  4220107 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttt 4220044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 18764068 - 18764005
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttt 18764005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 22434724 - 22434665
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||| ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  22434724 ttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 22434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 2118295 - 2118353
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttt 2118353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 4219559 - 4219613
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 4219613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 23494445 - 23494503
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttt 23494503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 33110011 - 33109949
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| || |||||||||||  |||||||| ||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttt 33109949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 38962362 - 38962304
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttt 38962304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 54995614 - 54995552
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttt 54995552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 10258433 - 10258372
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| |||| ||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttt 10258372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 12234874 - 12234814
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||| || ||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttt 12234814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 35363146 - 35363086
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||| |||| ||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttt 35363086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 20958403 - 20958344
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttt 20958344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 51020794 - 51020857
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| || || |||||||||  |||||| ||||||||||||||||||    
T  51020794 ttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttt 51020857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 362 - 412
Target Start/End: Complemental strand, 2118837 - 2118787
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcct 412  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcct 2118787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 33109686 - 33109744
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||| |||||||| |||||||||||| || |||||||||||||||||| ||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttt 33109744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 54995067 - 54995129
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||| |||||| |||||||| |||||||||| ||||| ||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttt 54995129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 11153145 - 11153206
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| ||| ||||| ||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttt 11153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 18751602 - 18751659
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| |||  ||||||||| ||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttt 18751659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 48526723 - 48526666
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||| |||||||||| ||||||||||| ||| |||||||||||||| ||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttt 48526666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 413
Target Start/End: Original strand, 48293592 - 48293648
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctg 413  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||| || |||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctg 48293648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 44890518 - 44890577
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||| |||||||| | |||||||| ||||||||||||| ||||| ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttt 44890577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 48708293 - 48708355
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||   |||||||||||||  ||||||| || |||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttt 48708355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 48526195 - 48526256
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||  |||||||||| |||| ||| ||||||||  |||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttt 48526256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 22170482 - 22170436
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaa 404  Q
    |||||||||||||||||||||| |||||||||| |||| | ||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaa 22170436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 16691616 - 16691560
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||| ||   |||||||| |||| |||||||| ||||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcc 16691560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 48295088 - 48295032
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||| |||||||| ||||||||||  ||| |||||||| ||||| ||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcc 48295032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 12935154 - 12935217
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 12935217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 22219901 - 22219838
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  22219901 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 22219838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 20741098 - 20741160
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 20741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 23073998 - 23074059
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 23074059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 11445535 - 11445476
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  11445535 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 11445476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 1149463 - 1149525
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttt 1149525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 18257135 - 18257197
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttt 18257197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 23075675 - 23075613
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttt 23075613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 10899942 - 10899999
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttt 10899999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 11277127 - 11277067
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttt 11277067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 11444984 - 11445044
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgccc 416  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  11444984 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgccc 11445044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 2319669 - 2319732
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttt 2319732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 415
Target Start/End: Complemental strand, 12935704 - 12935646
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcc 12935646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 15828187 - 15828126
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttt 15828126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 18504922 - 18504975
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 18504975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 20741650 - 20741589
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttt 20741589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 10900475 - 10900415
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||| ||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttt 10900415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 18257682 - 18257622
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||| |||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttt 18257622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 28472634 - 28472693
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||    
T  28472634 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgcc 28472693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 29859823 - 29859882
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||    
T  29859823 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgcc 29859882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 31470314 - 31470375
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| ||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttt 31470375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 1149977 - 1149917
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttt 1149917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 15827639 - 15827698
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||| ||| |||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttt 15827698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 18505463 - 18505404
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttt 18505404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 31470860 - 31470801
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| | ||||||| ||||| ||||||||||||| |||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttt 31470801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 29033436 - 29033494
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| |||| |||||||||  |||||||| ||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttt 29033494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 2322760 - 2322707
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcc 2322707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 4811372 - 4811432
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||   || |||||| ||| |||||||||||||| ||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttt 4811432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||| |||| ||||| || | |||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 29035180 - 29035122
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||| ||| ||||||||| ||||| |||||||| ||||  ||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttt 29035122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 3835268 - 3835215
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||   |||||||| |||| |||||||| ||||||||||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcc 3835215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 407
Target Start/End: Complemental strand, 4811801 - 4811753
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactg 407  Q
    |||||||||| ||||||| || ||||||||||||||| ||| |||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactg 4811753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 18183517 - 18183454
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18183517 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 18183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 2865302 - 2865240
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 2865240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 19359683 - 19359621
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 19359621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 5819474 - 5819414
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 5819414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 8647986 - 8647923
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  8647986 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttt 8647923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 15372421 - 15372358
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15372421 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 15372358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 5818927 - 5818989
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 5818989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 24362383 - 24362321
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttt 24362321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 16018588 - 16018649
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||    
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttt 16018649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 164191 - 164251
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttt 164251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 8647438 - 8647494
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 8647494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 19359136 - 19359196
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttt 19359196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 24331556 - 24331619
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||    
T  24331556 ttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttt 24331619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 8460928 - 8460990
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttt 8460990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 18182968 - 18183030
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttt 18183030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 8461477 - 8461416
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttt 8461416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 29455288 - 29455227
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttt 29455227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 419
Target Start/End: Complemental strand, 14215792 - 14215728
Alignment:
Q  355 cttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||| |||||||| |||||||||| |||| ||||||||||| |||||||||||    
T  14215792 cttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttt 14215728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 15708968 - 15709031
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||  ||||||||    
T  15708968 ttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttt 15709031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 7349562 - 7349502
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttt 7349502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 25000635 - 25000583
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtc 410  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtc 25000583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 14464067 - 14464018
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaact 406  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaact 14464018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 29454739 - 29454800
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||| ||||||||||| | ||||||||||||| |||||||| ||||| ||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttt 29454800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 4623148 - 4623204
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||| |||||||||| | || |||||||| ||||||||||    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcc 4623204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 14215243 - 14215291
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggt 409  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggt 14215291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 15709513 - 15709453
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| | ||||||||||||| ||| |||||| ||| ||||||||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt 15709453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 4222266 - 4222207
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| ||||||||||| ||  |||||||| ||||| ||||||||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttt 4222207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 2864756 - 2864814
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| || || ||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttt 2864814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 16019134 - 16019072
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||| || ||||||||| || |||||||| ||||||||| ||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttt 16019072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 4219663 - 4219719
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||| || ||||||||||| ||||| || ||| ||||| ||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcc 4219719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 7348559 - 7348619
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||| |||||||| || |||||| | ||| |||||||| ||||| ||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttt 7348619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 2218 - 2152
Alignment:
Q  353 aacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  2218 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttt 2152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 1665 - 1727
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttt 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 4754 - 4692
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttt 4692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 41681132 - 41681194
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 41681194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 11656452 - 11656515
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  11656452 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttt 11656515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 19176287 - 19176350
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttt 19176350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 19176838 - 19176775
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  19176838 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttt 19176775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 34541096 - 34541033
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  34541096 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttt 34541033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 9930203 - 9930142
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttt 9930142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 13225185 - 13225124
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttt 13225124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 351 - 419
Target Start/End: Original strand, 12571855 - 12571923
Alignment:
Q  351 taaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||    
T  12571855 taaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttt 12571923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 41681679 - 41681619
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttt 41681619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 419
Target Start/End: Original strand, 31133213 - 31133280
Alignment:
Q  352 aaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |||||||    
T  31133213 aaacataggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttt 31133280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 31133764 - 31133705
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttt 31133705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 33742919 - 33742982
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||    
T  33742919 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttt 33742982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 11337069 - 11337007
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttt 11337007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 11657003 - 11656950
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcc 411  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 11656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 44831246 - 44831307
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| || |||||||||||| |||||||| ||||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttt 44831307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 350 - 419
Target Start/End: Complemental strand, 44831799 - 44831730
Alignment:
Q  350 ttaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||| ||||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| ||||    
T  44831799 ttaaaattaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttt 44831730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 13224645 - 13224700
Alignment:
Q  363 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggt-ctgcccttt 13224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 9178180 - 9178122
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgccct 417  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccct 9178122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 9928912 - 9928969
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttt 9928969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 33328161 - 33328218
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttt 33328218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 4629795 - 4629857
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||| |||||||  |  |||||||||||| ||||||||||||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttt 4629857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 8074097 - 8074051
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaa 404  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaa 8074051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 12572393 - 12572336
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||| ||| ||| ||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttt 12572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 414
Target Start/End: Complemental strand, 4630328 - 4630276
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgc 414  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| |||||||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgc 4630276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 392
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggc 392  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 43958206 - 43958254
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaa 404  Q
    |||| |||||||| |||||||||||||||||||||  ||| ||||||||    
T  43958206 ttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 31779199 - 31779137
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 31779137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 20840556 - 20840616
Alignment:
Q  355 cttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  20840556 cttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 20840616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 32535508 - 32535448
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 32535448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 39556122 - 39556062
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 39556062  T

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Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 17464488 - 17464551
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttt 17464551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 43973988 - 43973925
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  43973988 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttt 43973925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 415
Target Start/End: Original strand, 39555577 - 39555634
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 39555634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 5137529 - 5137466
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttt 5137466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 24301104 - 24301045
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  24301104 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc 24301045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 26837903 - 26837840
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||    
T  26837903 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt 26837840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 29801964 - 29801901
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| || |||| |||||||||| |||||||||||||||||||||||    
T  29801964 ttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttt 29801901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 30104479 - 30104542
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||    
T  30104479 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttt 30104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 48452986 - 48453045
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc 48453045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 51473429 - 51473488
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttt 51473488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 4275911 - 4275849
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttt 4275849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 415
Target Start/End: Complemental strand, 20841107 - 20841050
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcc 20841050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 31778652 - 31778713
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttt 31778713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 25853234 - 25853294
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttt 25853294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 29801356 - 29801416
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| |||||||||||| || |||| ||||||||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttt 29801416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 37727475 - 37727415
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||||||| ||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttt 37727415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 415
Target Start/End: Original strand, 23644461 - 23644518
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||| ||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgcc 23644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 25612519 - 25612462
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttt 25612462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 415
Target Start/End: Original strand, 27393660 - 27393717
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgcc 27393717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 415
Target Start/End: Complemental strand, 27394123 - 27394066
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||  |||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcc 27394066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 30098309 - 30098248
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| |||||||||| | || |||||||||||||| ||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttt 30098248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 41046703 - 41046760
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttt 41046760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 23645010 - 23644950
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttt 23644950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 5136978 - 5137040
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| |||||||||||||||||| ||||||||||||| | |||||||| ||||| ||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttt 5137040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 357 - 415
Target Start/End: Complemental strand, 37222118 - 37222060
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||| ||||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgcc 37222060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 24300560 - 24300616
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  24300560 ttaattacatttttggtct-cgtgttttggcttattcacgaaactggtcctgtccttt 24300616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 32534962 - 32535015
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||| |||||||||||| || |||||||| ||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcc 32535015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 37726928 - 37726989
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||| ||  | ||||||||||| |||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttt 37726989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 23228552 - 23228492
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||  |||||||||||||| |||||||| || || ||||||||    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttt 23228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 22425354 - 22425299
Alignment:
Q  363 taattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgccctt 418  Q
    ||||||||||||||||| |||||||| |||||| ||||||| |||||| |||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgccctt 22425299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 51474882 - 51474819
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||   ||||||||||| || |||||||| ||||| ||||||||    
T  51474882 ttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttt 51474819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 26837358 - 26837420
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| ||||||||| |||||||| | || |||||||||| |||||||| ||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttt 26837420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 403
Target Start/End: Original strand, 45965936 - 45965982
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaa 403  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaa 45965982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 43973441 - 43973486
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaa 404  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaa 43973486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 17465038 - 17464986
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtc 410  Q
    ||||||||||||| |||||||| |||||||||||||||  || ||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtc 17464986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 50116954 - 50116894
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| || |||||||||| | || |||||||| ||||| ||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttt 50116894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 22424811 - 22424874
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||  ||||||||  ||||| | ||||||||||| ||| |||||    
T  22424811 ttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttt 22424874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 400
Target Start/End: Original strand, 37220555 - 37220598
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcac 400  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcac 37220598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 25853770 - 25853721
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtc 410  Q
    |||||||||||||||| || ||||||||||  ||| ||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtc 25853721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 26274570 - 26274627
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||| ||||| || | || |||||| ||| |||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttt 26274627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 41047239 - 41047183
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||| | ||||| |||||||||||| ||||||||||||| ||| |||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttt 41047183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 52375880 - 52375824
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcct 412  Q
    |||||||||||||||||||||||| |||  ||||| || | |||||||| |||||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 55390146 - 55390090
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcct 412  Q
    |||||||||||||||||||||||| |||  ||||  || |||||||||| |||||||    
T  55390146 ttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcct 55390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 4790 - 4853
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttt 4853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 5334 - 5276
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttt 5276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 8678542 - 8678601
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 8678601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 18984117 - 18984179
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttt 18984179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 33144462 - 33144404
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 33144404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 50970276 - 50970338
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttt 50970338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 5540364 - 5540303
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttt 5540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 39154566 - 39154505
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttt 39154505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 50970824 - 50970763
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttt 50970763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 8679086 - 8679026
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttt 8679026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 4636515 - 4636456
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttt 4636456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 5539817 - 5539876
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttt 5539876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 9018970 - 9019033
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||    
T  9018970 ttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttt 9019033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 415
Target Start/End: Complemental strand, 15173640 - 15173582
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc 15173582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 419
Target Start/End: Original strand, 15646190 - 15646252
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttt 15646252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 15173099 - 15173156
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttt 15173156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 15646741 - 15646680
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttt 15646680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 18984665 - 18984604
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttt 18984604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 29869619 - 29869680
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttt 29869680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 29307487 - 29307427
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttt 29307427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 29870164 - 29870108
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcc 29870108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 33143925 - 33143977
Alignment:
Q  367 tacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttt 33143977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 2733505 - 2733442
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||| |||||||||| | |||||||||||||||| ||||| ||||||||||||||    
T  2733505 ttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttt 2733442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 21856039 - 21856102
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| ||||||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||    
T  21856039 ttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttt 21856102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 419
Target Start/End: Complemental strand, 17433758 - 17433700
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttt 17433700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 5963120 - 5963063
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttt 5963063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 52268289 - 52268350
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| |||| |||||||||  |||||||| ||||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttt 52268350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 415
Target Start/End: Complemental strand, 21856588 - 21856532
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||| |||||||    
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcc 21856532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 26859059 - 26859115
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||||||||||||||| | ||||||||||||| | |||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgcc 26859115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 29306953 - 29307013
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||| || |||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttt 29307013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 5962579 - 5962638
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttt 5962638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 9019511 - 9019452
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||||||||||||| |||||||||| |||| |||| |||||||| |||||    
T  9019511 ttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgcc 9019452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 26859606 - 26859544
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||||||||  |||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttt 26859544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 47826966 - 47827024
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttt 47827024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 39154021 - 39154079
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||| || ||||||||| || ||||||||||| || ||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttt 39154079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 407
Target Start/End: Original strand, 17433216 - 17433264
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactg 407  Q
    ||||||||||||||||||||| || |||||||||||| ||| |||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactg 17433264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 419
Target Start/End: Complemental strand, 47827141 - 47827073
Alignment:
Q  350 ttaaacttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||| || |||||||| ||||||||| ||| | |||||||||||| |||||||| ||||| ||||||||    
T  47827141 ttaaattttggcttaat-acacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttt 47827073  T

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Target: scaffold1223 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 361 - 419
Target Start/End: Original strand, 755 - 813
Alignment:
Q  361 cttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttt 813  T

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Target: scaffold1223; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 1286 - 1226
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttt 1226  T

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Target: scaffold0417 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 11168 - 11108
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttt 11108  T

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Target: scaffold0417; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 419
Target Start/End: Original strand, 10643 - 10681
Alignment:
Q  381 tcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  10643 tcgtgttttggcctactcatgaaactggtcctgcccttt 10681  T

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Target: scaffold0176 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 19166 - 19106
Alignment:
Q  359 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttt 19106  T

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Target: scaffold0176; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 18834 - 18895
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||| ||||||||||||||| |  |||||||||||| |||||||||||||| ||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttt 18895  T

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Target: scaffold0019 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 134221 - 134158
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||    
T  134221 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttt 134158  T

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Target: scaffold0113 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 419
Target Start/End: Complemental strand, 28789 - 28728
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||| ||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttt 28728  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 64847 - 64790
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||| |||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttt 64790  T

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Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 64301 - 64362
Alignment:
Q  358 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    |||||||||||||||||||||| |||||||||| | || ||||||||||| ||||| |||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttt 64362  T

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Target: scaffold0432 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 9935 - 9992
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| || ||||||||    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttt 9992  T

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Target: scaffold0432; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 409
Target Start/End: Complemental strand, 10414 - 10367
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggt 409  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggt 10367  T

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Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 8551 - 8494
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||||||||| ||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttt 8494  T

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Target: scaffold1585 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 568 - 627
Alignment:
Q  360 gcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| || || ||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttt 627  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 415
Target Start/End: Original strand, 61026 - 61084
Alignment:
Q  357 taggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    ||||||||| |||||||||| || ||||||||||||||| |||||||| || |||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgcc 61084  T

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Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 62000 - 61943
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| ||||||| ||||||    
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttt 61943  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 42706 - 42643
Alignment:
Q  356 ttaggcttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcccttt 419  Q
    ||||||||||||| |||||||| | ||||||||||| ||| ||| ||||||| | |||||||||    
T  42706 ttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttt 42643  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 42172 - 42225
Alignment:
Q  362 ttaattacacttttggtcttcgtgttttggcctattcacgaaactggtcctgcc 415  Q
    |||||||||||||| ||  ||||||||||| ||| ||||||||||| |||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgcc 42225  T

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Target: scaffold1696 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 454 - 500
Alignment:
Q  363 taattacacttttggtcttcgtgttttggcctattcacgaaactggtc 410  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtc 500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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