View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1371_low_73 (Length: 283)
Name: NF1371_low_73
Description: NF1371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1371_low_73 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 29 - 270
Target Start/End: Original strand, 13414286 - 13414530
Alignment:
| Q |
29 |
actacgtactattcaactttgtacaaggtgagaacggagaaaacaagacctgttcatttcatccttttttgatcaaaaccttttcattttatcatagcac |
128 |
Q |
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| T |
13414286 |
actatgtactattcaactttgtacaaggtgagaacggagaaaacaagacctgttcatttcatccttttttgatcaaaaccttttcattttatcctagcac |
13414385 |
T |
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| Q |
129 |
atagtaaagaaaatacaat---taataatattatgtcttagaaatgtacttcatcagaatcttcctttcgttatatattttgttttcacactgtattaaa |
225 |
Q |
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| T |
13414386 |
atagtaaagaaaatacaattaataataatattatgtcttagaaatgtacttcattagaatcttcctttccttatatattttgttttcacactgtattaaa |
13414485 |
T |
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| Q |
226 |
tattttgttttcattacgtacccaaattaaaaataaagcaagtct |
270 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13414486 |
tattttgttttcattacgtacccaaattaaaaataaagcaagtct |
13414530 |
T |
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