View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1372-INSERTION-7 (Length: 254)
Name: NF1372-INSERTION-7
Description: NF1372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1372-INSERTION-7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 454313 - 454559
Alignment:
| Q |
8 |
cgtccagctagtggtaagccacaaatgttccaaaaactctattagtcttatatgaaattgtaggatccactaaatgaaagttaaaaattcaaattagatt |
107 |
Q |
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| T |
454313 |
cgtccggctagtggtaagccacaaatgttccaaaaactctattagtcttatatgagtttgttagatccactaaatgaaagttaaaaattcaaattagatt |
454412 |
T |
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| Q |
108 |
ctaccatgtgctttcaattagatagtaacaagaaaaactaaagaatatagcattcaagtttgcaaatacttactaagttccagcaattctcttagtattt |
207 |
Q |
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| T |
454413 |
ctaccatgtgctttcaattagatagtaacaagaaaaactaaggaatatagcattcaagtttgcaaatacttactaagttccagcaattctcttagtattt |
454512 |
T |
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| Q |
208 |
ccttgatgttcatctatatcaatcatttttgccataccaaagtctga |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
454513 |
ccttgatgttcatctatatcaatcatttttgccataccaaagtctga |
454559 |
T |
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