View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13720_low_10 (Length: 212)
Name: NF13720_low_10
Description: NF13720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13720_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 52408930 - 52409079
Alignment:
| Q |
48 |
ctccacaattttttgccatggttggagaacaaagcttcttccaccatttcttcttcccttaccatttccaattcttcatatggaaactccttgtttgctt |
147 |
Q |
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| T |
52408930 |
ctccacaattttttgccatggttggagaacaaagcttcttccaccatttcttcttccctttccatttccaattcttcatatggaaactccttgtttgctt |
52409029 |
T |
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| Q |
148 |
ctaaatcaatacaaaccggtgattgcattttacaagttccttattctctg |
197 |
Q |
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| T |
52409030 |
ctaaatcaatacaaaccggtgattgcattttacaagttccttattctctg |
52409079 |
T |
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