View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13721_high_8 (Length: 336)
Name: NF13721_high_8
Description: NF13721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13721_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 21 - 335
Target Start/End: Original strand, 4051420 - 4051734
Alignment:
| Q |
21 |
atttaaacatgtagattataagctagaaaattcaagctataaataaataaaagaattaattaattgttcacaatgagaatcatataactagatcttctgc |
120 |
Q |
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| T |
4051420 |
atttaaacatgtagattataagctagaaaattcaagctataaataaataaaagaattaattaattgttcacaatgagaatcatataactagatcttctgc |
4051519 |
T |
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| Q |
121 |
ttttacttgagaagtgcaacataaatggtgctaccaattatttgaaatacagtgaaaaagtggaaacttttgaagtactaaatcaaaagagagaaaaagg |
220 |
Q |
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| T |
4051520 |
ttttacctgagaagtgcaacataaatggtgctaccaattatttgaaatacagtgaaaaagtggaaacttttgaagtactaaatcaaaagagagaaaaagg |
4051619 |
T |
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| Q |
221 |
atcttgcaataaacttgacaaccattggcttgtgacattccatttctgccactttcttcttcttcatggtcaatgattgaagccaaggtgaagcttgaga |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4051620 |
atcttgcaataaacttgacaaccattggcttgtgacattccatttctgccactttcttcttcttcatggtcaatgattgaagccaaggtgaagcttgaga |
4051719 |
T |
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| Q |
321 |
gtctaattttatcaa |
335 |
Q |
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| T |
4051720 |
gtctaattttatcaa |
4051734 |
T |
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