View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13721_high_9 (Length: 328)
Name: NF13721_high_9
Description: NF13721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13721_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 16 - 306
Target Start/End: Complemental strand, 4189602 - 4189312
Alignment:
| Q |
16 |
agcatgaacatgagtccaagtatgagcccacctttccctactgctgcttcaccatctccagcttcttcaccgtcaccttccaccggagaatcaatgtctg |
115 |
Q |
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| T |
4189602 |
agcatgaacatgagtccaagtatgagcccacctttccctactgatgcttcaccatctccagcttcttcaccgtcaccttccaccggagaatcaatgtctg |
4189503 |
T |
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| Q |
116 |
ataacccagttgcttcaagtccaagcaacgcggttgttcgcagaagcagctttttcatgctaccattctttgccggtgctgcactgcttcttgcataaac |
215 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
4189502 |
ataatccagttgcttcaagtccaagcaacgcggttgttcgcagaagcagctttttcatgctaccattctttgctggtgctgcactgcttcttgcataaac |
4189403 |
T |
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| Q |
216 |
aaagttgagagttcttgattcaacttcatgtagaccaagtcacaaagatatgcaatcgtgtatcttattttgttttcctttctagcttcta |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4189402 |
aaagttgagagttcttgattcaacttcatgtagaccaagtcacaaagatatgcaatcgtgtatcttattttgttttcctttctagcttcta |
4189312 |
T |
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