View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13721_low_15 (Length: 244)
Name: NF13721_low_15
Description: NF13721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13721_low_15 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 4052151 - 4051908
Alignment:
| Q |
1 |
attatacttttgttgttgttctgcttcttcattttgtttcataagactagtgcatgtttggattaacgattgactgaattagagtgtgttaccgttgttt |
100 |
Q |
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| T |
4052151 |
attatacttttgttgttcttctgcttcttaattttgtttcataagactagtgcatgtttggattaacgattgactgaattagagtgtgttaccgttgttt |
4052052 |
T |
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| Q |
101 |
tgacaaaaattggatttgaagtttcaacaaattaaaattacggtgtcactgtaattttgtcaaaatttattgctaatttaagcaatgaatcctctttggt |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4052051 |
tgacaaaaattgaatttgaagtttcaacaaattaaaattacggtgtcactgtaattttgtcaaaatttattgctaatttaagcaatgaatcctctttggt |
4051952 |
T |
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| Q |
201 |
tgatttttggctattttgttacagtttgtgtgtttcttcatcat |
244 |
Q |
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| T |
4051951 |
tgatttttggctattttgttacagtttgtgtgtttcttcatcat |
4051908 |
T |
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