View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13721_low_4 (Length: 505)

Name: NF13721_low_4
Description: NF13721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13721_low_4
NF13721_low_4
[»] chr3 (5 HSPs)
chr3 (10-440)||(33791874-33792301)
chr3 (49-202)||(25359482-25359634)
chr3 (47-134)||(44225601-44225688)
chr3 (114-154)||(31708212-31708252)
chr3 (47-79)||(52966786-52966818)
[»] chr2 (5 HSPs)
chr2 (54-202)||(33019070-33019216)
chr2 (54-197)||(22536028-22536173)
chr2 (51-134)||(12110919-12111002)
chr2 (113-207)||(11504034-11504126)
chr2 (118-154)||(16518850-16518886)
[»] chr6 (11 HSPs)
chr6 (54-157)||(16540176-16540279)
chr6 (49-286)||(4910850-4911085)
chr6 (84-251)||(3482023-3482188)
chr6 (118-197)||(434214-434292)
chr6 (118-185)||(882728-882794)
chr6 (105-207)||(25195330-25195431)
chr6 (120-185)||(8860546-8860610)
chr6 (114-194)||(34620919-34620998)
chr6 (114-194)||(34748356-34748435)
chr6 (59-202)||(17225877-17226019)
chr6 (125-169)||(12766643-12766686)
[»] chr1 (10 HSPs)
chr1 (54-207)||(30557524-30557674)
chr1 (120-207)||(1514363-1514449)
chr1 (114-207)||(7524133-7524225)
chr1 (114-202)||(10324911-10324998)
chr1 (59-192)||(6283167-6283298)
chr1 (54-134)||(40352451-40352531)
chr1 (47-134)||(4347034-4347121)
chr1 (125-202)||(3016187-3016263)
chr1 (47-79)||(7826332-7826364)
chr1 (102-154)||(49216768-49216820)
[»] chr8 (9 HSPs)
chr8 (114-207)||(32927912-32928004)
chr8 (118-202)||(16972041-16972124)
chr8 (114-207)||(35495010-35495102)
chr8 (120-207)||(26100125-26100211)
chr8 (118-197)||(38335838-38335916)
chr8 (113-154)||(37684477-37684518)
chr8 (114-154)||(9461511-9461551)
chr8 (52-92)||(29970888-29970928)
chr8 (110-154)||(32101145-32101189)
[»] scaffold0168 (1 HSPs)
scaffold0168 (54-154)||(31901-32001)
[»] chr5 (7 HSPs)
chr5 (113-209)||(38845461-38845557)
chr5 (59-207)||(18851000-18851147)
chr5 (84-197)||(42858138-42858250)
chr5 (122-207)||(6951286-6951370)
chr5 (125-186)||(10898762-10898821)
chr5 (153-197)||(24306107-24306151)
chr5 (153-197)||(24367165-24367209)
[»] chr4 (6 HSPs)
chr4 (54-154)||(1616462-1616561)
chr4 (114-197)||(35065093-35065175)
chr4 (115-209)||(21691186-21691279)
chr4 (121-198)||(34759468-34759543)
chr4 (78-147)||(39733577-39733646)
chr4 (54-154)||(16552027-16552127)
[»] chr7 (5 HSPs)
chr7 (114-219)||(40491586-40491690)
chr7 (114-197)||(12306751-12306835)
chr7 (114-154)||(45557437-45557477)
chr7 (161-209)||(35772276-35772324)
chr7 (114-154)||(40561731-40561771)
[»] scaffold0172 (1 HSPs)
scaffold0172 (51-134)||(15239-15322)


Alignment Details
Target: chr3 (Bit Score: 345; Significance: 0; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 10 - 440
Target Start/End: Original strand, 33791874 - 33792301
Alignment:
Q  10 attattctatcttctacgtgtgtctttggttgtcaaatggagaaaattcattttgatagaattgattttgtatgattgattttggctagaagtggttcta 109  Q
    ||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791874 attattctatcttatacgtgcgtctttggttgtcaaatggagagaattcattttgatagaattgattttgtatgattgattttggctagaagtggttcta 33791973  T
Q  110 atcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatctt 209  Q
    || |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  33791974 ataaaaaatgatttgtgtttggatagattcatgtaaaagtgagtttaaacaataaatttatgtgtaaaaatcaattataaaatcaaaaactatgaatctt 33792073  T
Q  210 gactacaagtttgaatcagttttaaaggaagaatcaattctagtttagagaaaccaaacatgccataatcaattctaaactccttactaatttgatggtt 309  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| || |||| |||||||||||||||||    
T  33792074 gactacaagtttgaatcggttttaaaggaagaatcaattctactttaaagaaaccaaacatgtcataatcaattatagactctttactaatttgatggtt 33792173  T
Q  310 tttatatgttgaggcagaatattcaccgacgctttcaaacgatctgatcgactattatcactcattttgaaggagggaacgtaactcaagaaattttcaa 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||| | |||    
T  33792174 tttatatgttgaggcagaatattcaccgacgctttcaaacgatctgatagactattatcactcattt---aggagggaacgtaactcaagaaatatccaa 33792270  T
Q  410 atcaagtaactttctctccatctaattacga 440  Q
    |||||||||||||||||||||||||||||||    
T  33792271 atcaagtaactttctctccatctaattacga 33792301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 49 - 202
Target Start/End: Original strand, 25359482 - 25359634
Alignment:
Q  49 gagaaaattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaag 148  Q
    ||||||||| |||||||||||||||||||| ||| || |||||||| || || |  |||| |  |||||||||||||||||||||| ||||||  | |||    
T  25359482 gagaaaattgattttgatagaattgattttatataatcgattttggttaaaaataattctgacaaaaagtgatttgtgtttggatacattcatatagaag 25359581  T
Q  149 tgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactac 202  Q
    ||| ||| |||||||||| | ||||| |||| |||||||| ||| |||||||||    
T  25359582 tga-ttttaacaataaatatgtgtgtgaaaatcaattatagaataaaaaactac 25359634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 44225688 - 44225601
Alignment:
Q  47 tggagaaaattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggata 134  Q
    ||||||||||| ||||| ||| |||||||||||||  ||||||||| | || |||||  | ||||  |||||||||| ||||||||||    
T  44225688 tggagaaaattgattttaatataattgattttgtagaattgattttcgttaaaagtgagtttaatgtaaagtgatttatgtttggata 44225601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 31708212 - 31708252
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtt 154  Q
    |||||| |||||||||||||| ||||||| |||||||||||    
T  31708212 aaagtggtttgtgtttggatacattcatgtaaaagtgagtt 31708252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 52966786 - 52966818
Alignment:
Q  47 tggagaaaattcattttgatagaattgattttg 79  Q
    ||||||||||| |||||||||||||||||||||    
T  52966786 tggagaaaattgattttgatagaattgattttg 52966818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 8e-19; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 33019070 - 33019216
Alignment:
Q  54 aattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagt 153  Q
    |||| ||||||| ||||||| |||| ||  ||||||||||| || ||||| |||| |  |||||||||||||||||||||  ||||||| |||||||||     
T  33019070 aattgattttgacagaattg-ttttatagaattgattttggttaaaagtgattctgactaaaagtgatttgtgtttggatgcattcatgtaaaagtgag- 33019167  T
Q  154 ttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactac 202  Q
    || ||| |||||||||||||| |||| ||||| ||||| ||||| ||||    
T  33019168 ttgaactataaatttatgtgtgaaaatcaattctaaaaccaaaagctac 33019216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 22536173 - 22536028
Alignment:
Q  54 aattcattttgatagaattgattttgtatgat---tgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtg 150  Q
    |||| |||||||||||||||||| ||||| ||   ||||||||| |  ||||  ||||||  |||||||||||||||||||||| ||| ||| |||| ||    
T  22536173 aattgattttgatagaattgattatgtattataattgattttggttgaaagtatttctaactaaaagtgatttgtgtttggatacatttatgtaaaaatg 22536074  T
Q  151 agtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaa 197  Q
    ||||| ||| |||||| | |||| |||||  |||| |||||||||||    
T  22536073 agttt-aactataaatatgtgtgcaaaaattaattctaaaatcaaaa 22536028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 12111002 - 12110919
Alignment:
Q  51 gaaaattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggata 134  Q
    ||||||| ||||||||||||||||||||||   ||||||||||| || |||||  |  |||  |||||||||| ||||||||||    
T  12111002 gaaaattgattttgatagaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggata 12110919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 11504034 - 11504126
Alignment:
Q  113 aaaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    |||||||||||||||||  ||| ||||||| ||||||||| || ||| |||| ||| ||||| |||| ||||| || ||||||||||||| ||||    
T  11504034 aaaagtgatttgtgttttaatacattcatgtaaaagtgag-ttgaactataactttgtgtgtgaaaa-caattctataatcaaaaactacaaatc 11504126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 16518886 - 16518850
Alignment:
Q  118 tgatttgtgtttggatagattcatgcaaaagtgagtt 154  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  16518886 tgatttgtgtttggatacattcatgtaaaagtgagtt 16518850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 16540279 - 16540176
Alignment:
Q  54 aattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagt 153  Q
    |||| |||||||||||||||||| ||||  ||||||||||| |||||||  ||| || || ||||| |||||||||||||| ||| ||| ||||||||||    
T  16540279 aattgattttgatagaattgattatgtagaattgattttggttagaagtaattccaaccagaagtggtttgtgtttggatacattgatgtaaaagtgagt 16540180  T
Q  154 ttaa 157  Q
    ||||    
T  16540179 ttaa 16540176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 286
Target Start/End: Complemental strand, 4911085 - 4910850
Alignment:
Q  49 gagaaaattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaag 148  Q
    ||||||||| |||||||||||||||||| | ||  ||| ||||||| || ||||  |||| |  ||||||||||| |||||||||| ||| ||| |||||    
T  4911085 gagaaaattgattttgatagaattgattctctagaattaattttggttaaaagtaattctgactaaaagtgatttatgtttggatacatttatgtaaaag 4910986  T
Q  149 tgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatcttgactacaagtttgaatcagttttaaaggaagaatcaatt 248  Q
    |||| |  ||| |||||||| | ||| |||| ||||| || |||||||| |||| |||| |  || |||| | |||||| ||||  ||| ||||||||||    
T  4910985 tgag-tcgaactataaatttgtatgtgaaaatcaattctagaatcaaaagctacaaatcatagcttcaag-tagaatcaatttttgaggcagaatcaatt 4910888  T
Q  249 ctagtttagagaaaccaaacatgccataatcaattcta 286  Q
    ||| || |    ||||||||||| || |||||||||||    
T  4910887 ctaattgacgacaaccaaacatgtcagaatcaattcta 4910850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 3482188 - 3482023
Alignment:
Q  84 attgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaa 183  Q
    ||||||||||| || || || |||| |  |||||||||||||||||| ||| ||||||| |||||| || || ||| ||||| || ||||| |||| |||    
T  3482188 attgattttggttaaaaatgattctcaataaaagtgatttgtgtttgaatacattcatgtaaaagtaag-ttgaactataaacttgtgtgtgaaaatcaa 3482090  T
Q  184 ttataaaatcaaaaactacgaatcttgactacaagtttgaatcagttttaaaggaagaatcaattcta 251  Q
    || ||||||||||  |||| |||||| ||| ||||| | ||||| || |||||  |||||||||||||    
T  3482089 ttctaaaatcaaaggctacaaatcttaacttcaagtat-aatcaattctaaagacagaatcaattcta 3482023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 434214 - 434292
Alignment:
Q  118 tgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaa 197  Q
    ||||||||||||||||| |||| || ||||||||||| |||   ||||||||||| |||||| ||||| |||||||||||    
T  434214 tgatttgtgtttggatatattcgtgtaaaagtgagttgaaa-tttaaatttatgtataaaaatcaattctaaaatcaaaa 434292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 882794 - 882728
Alignment:
Q  118 tgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaatt 185  Q
    |||||| |||||||||| ||||||||||||||||| |||||||||||||||   |||||||| |||||    
T  882794 tgatttatgtttggatacattcatgcaaaagtgag-ttaaacaataaatttgaatgtaaaaatcaatt 882728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 25195330 - 25195431
Alignment:
Q  105 ttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacga 204  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||||||||| || ||   ||||||| ||| | |||| |||||||| ||| ||||||||| |    
T  25195330 ttctaattaaaagtgatttgtgtttggatacatttatgtaaaagtgag-ttgaattgtaaatttgtgtatgaaaatcaattatagaatgaaaaactacaa 25195428  T
Q  205 atc 207  Q
    |||    
T  25195429 atc 25195431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 8860610 - 8860546
Alignment:
Q  120 atttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaatt 185  Q
    |||||||||| |||| ||||||||||||||||| || ||| |||||||||||||| |||| |||||    
T  8860610 atttgtgtttagatacattcatgcaaaagtgag-ttgaaccataaatttatgtgtcaaaatcaatt 8860546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 34620998 - 34620919
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatca 194  Q
    |||||||||| |||||||||| ||| ||| ||||||||||| ||| |||||||||  ||||||||| ||||| || |||||    
T  34620998 aaagtgatttatgtttggatacatttatgtaaaagtgagttgaaa-aataaattttagtgtaaaaatcaattctagaatca 34620919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 34748435 - 34748356
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatca 194  Q
    |||||||||| |||||||||| ||| ||| ||||||||||| ||| |||||||||  ||||||||| ||||| || |||||    
T  34748435 aaagtgatttatgtttggatacatttatgtaaaagtgagttgaaa-aataaattttagtgtaaaaatcaattctagaatca 34748356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 17226019 - 17225877
Alignment:
Q  59 attttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaa 158  Q
    |||||||||||||| ||||||||  || |||||||  |||||||  || | || |||| |||| |||| || |||| ||||||| |||| |||| || ||    
T  17226019 attttgatagaatttattttgtagaatcgattttgaatagaagtaattttgattaaaaatgatatgtggtttgatacattcatgtaaaactgag-ttgaa 17225921  T
Q  159 caataaatttatgtgtaaaaaccaattataaaatcaaaaactac 202  Q
    | |||||||| | |||||||| ||||| || |||||||| ||||    
T  17225920 ctataaatttgtatgtaaaaatcaattctagaatcaaaagctac 17225877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 12766643 - 12766686
Alignment:
Q  125 tgtttggatagattcatgcaaaagtgagtttaaacaataaattta 169  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||    
T  12766643 tgttttgatacattcatgcaaaagtgag-ttaaacaataaattta 12766686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 30557674 - 30557524
Alignment:
Q  54 aattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagt 153  Q
    |||| |||||||||||||||||| ||||  ||||||||||| || |||||  ||| |  | |||||||||||||||||||| ||||||  |||||||||     
T  30557674 aattgattttgatagaattgattctgtagaattgattttggttaaaagtgactctgactagaagtgatttgtgtttggatacattcatataaaagtgag- 30557576  T
Q  154 ttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    || ||| |||||||  ||||| |||| ||||| || ||||||||||||| ||||    
T  30557575 ttgaactataaatt--tgtgtgaaaatcaattctagaatcaaaaactacaaatc 30557524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 1514449 - 1514363
Alignment:
Q  120 atttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    ||||||||||||||| ||||||| |||| |||||| || |||||||||| |||||||||| |||||||| ||| |||| |||| ||||    
T  1514449 atttgtgtttggatacattcatgtaaaaatgagttgaa-caataaatttgtgtgtaaaaatcaattatataataaaaagctacaaatc 1514363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 7524225 - 7524133
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    ||||||||||||||||||| | ||| ||| ||||||||| || ||| |||||||| |||||||||| ||||| || |||||||| |||| ||||    
T  7524225 aaagtgatttgtgtttggacacatttatgtaaaagtgag-ttgaactataaatttgtgtgtaaaaatcaattctataatcaaaagctacaaatc 7524133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 10324911 - 10324998
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactac 202  Q
    |||||||| ||||| |||||| ||| ||| |||||||||| ||| ||||||||||  ||||||||| |||||||| |||||||| ||||    
T  10324911 aaagtgatatgtgtatggatacattaatgtaaaagtgagtataa-caataaatttgagtgtaaaaatcaattatagaatcaaaagctac 10324998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 192
Target Start/End: Original strand, 6283167 - 6283298
Alignment:
Q  59 attttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaa 158  Q
    ||||||||| ||||||| || ||| ||||||||||  || |||||| ||  || |||||||||||||||||||||| ||||||  ||||  ||  |||||    
T  6283167 attttgataaaattgatgtt-tataattgattttgtttaaaagtggctccgattaaaagtgatttgtgtttggatacattcataaaaaaacga-attaaa 6283264  T
Q  159 caataaatttatgtgtaaaaaccaattataaaat 192  Q
    | |||||||| ||||||||||  |||| ||||||    
T  6283265 ctataaatttgtgtgtaaaaataaattctaaaat 6283298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 40352531 - 40352451
Alignment:
Q  54 aattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggata 134  Q
    |||| ||||||||||||||||||||||   ||||||||||| || |||||  | ||||  |||||||||| ||||||||||    
T  40352531 aattgattttgatagaattgattttgtggaattgattttggttaaaagtgagtttaatgtaaagtgatttatgtttggata 40352451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 4347121 - 4347034
Alignment:
Q  47 tggagaaaattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggata 134  Q
    |||| |||||| |||||| ||||||||||||||||  ||||||||||| || |||||  |  |||  |||||||||| ||||||||||    
T  4347121 tggaaaaaattgattttggtagaattgattttgtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggata 4347034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 3016263 - 3016187
Alignment:
Q  125 tgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactac 202  Q
    |||||||||| ||||||| ||||||||| || |||  |||||||||||||||| | ||||| || |||||||| ||||    
T  3016263 tgtttggatacattcatgtaaaagtgag-ttgaaccgtaaatttatgtgtaaacatcaattctagaatcaaaagctac 3016187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 7826332 - 7826364
Alignment:
Q  47 tggagaaaattcattttgatagaattgattttg 79  Q
    ||||||||||| |||||||||||||||||||||    
T  7826332 tggagaaaattgattttgatagaattgattttg 7826364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 49216768 - 49216820
Alignment:
Q  102 tggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtt 154  Q
    ||||| ||||| |||||||||||||||| |||| ||||| | |||||||||||    
T  49216768 tggttttaatcgaaagtgatttgtgtttagatacattcaagtaaaagtgagtt 49216820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 32928004 - 32927912
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    ||||||||||||||||||||| ||||||| ||||||||| || ||| |||||||| ||||||||||  |||| || |||||||| |||| ||||    
T  32928004 aaagtgatttgtgtttggatacattcatgtaaaagtgag-ttgaactataaatttgtgtgtaaaaatgaattctataatcaaaagctacaaatc 32927912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 16972041 - 16972124
Alignment:
Q  118 tgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactac 202  Q
    ||||||||||||| ||| ||||||| |||||||| ||| |||||||||||| ||| |||||| ||||| |||||| |||||||||    
T  16972041 tgatttgtgtttgaatacattcatgtaaaagtga-tttgaacaataaatttgtgtttaaaaatcaattctaaaattaaaaactac 16972124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 35495102 - 35495010
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    ||||||||||||||||||||| ||||||| |||||| || || ||| ||| |||| |||||||||| ||||| || |||||||| |||| ||||    
T  35495102 aaagtgatttgtgtttggatatattcatgtaaaagtaag-ttgaactatagatttgtgtgtaaaaaacaattctagaatcaaaagctacaaatc 35495010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 26100125 - 26100211
Alignment:
Q  120 atttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    ||||||||||||||  ||| ||| ||||||||| || ||| |||||||| |||||||||| |||||||| |||||||| |||| ||||    
T  26100125 atttgtgtttggatgcatttatgtaaaagtgag-ttgaaccataaatttgtgtgtaaaaatcaattatagaatcaaaagctacaaatc 26100211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 38335838 - 38335916
Alignment:
Q  118 tgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaa 197  Q
    ||||||||||| ||||| ||||||| ||||||||| ||| |  |||||||| || ||||||| ||||| |||||||||||    
T  38335838 tgatttgtgttcggatacattcatgtaaaagtgag-ttagaatataaatttgtgcgtaaaaatcaattctaaaatcaaaa 38335916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 37684518 - 37684477
Alignment:
Q  113 aaaagtgatttgtgtttggatagattcatgcaaaagtgagtt 154  Q
    |||||||||||||||||||||| ||| ||| |||||||||||    
T  37684518 aaaagtgatttgtgtttggatacatttatgtaaaagtgagtt 37684477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 9461511 - 9461551
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtt 154  Q
    ||||||||||||||||||||| ||||||  |||||||||||    
T  9461511 aaagtgatttgtgtttggatacattcatataaaagtgagtt 9461551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 29970928 - 29970888
Alignment:
Q  52 aaaattcattttgatagaattgattttgtatgattgatttt 92  Q
    |||||| |||||||||||||||| ||||||| |||||||||    
T  29970928 aaaattgattttgatagaattgaatttgtataattgatttt 29970888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 32101189 - 32101145
Alignment:
Q  110 atcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtt 154  Q
    |||||||||||||||||| |||||| ||| ||| |||||||||||    
T  32101189 atcaaaagtgatttgtgtgtggatacatttatgtaaaagtgagtt 32101145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 32001 - 31901
Alignment:
Q  54 aattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagt 153  Q
    |||| |||||||||||||||||| ||||  ||||||||||| |||||||  ||| ||  | ||||| |||||||||||||| ||| ||| ||||||||||    
T  32001 aattgattttgatagaattgattatgtagaattgattttggttagaagtaattccaactagaagtggtttgtgtttggatacatttatgtaaaagtgagt 31902  T
Q  154 t 154  Q
    |    
T  31901 t 31901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 38845557 - 38845461
Alignment:
Q  113 aaaagtgatttgtgtttggatagattcatg-caaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatctt 209  Q
    |||| ||||||||||||||||| |||||||  |||||||||||| ||| ||| |||| ||||| |||| ||||| || ||||||||||||| ||||||    
T  38845557 aaaaatgatttgtgtttggatatattcatgtaaaaagtgagttt-aactatatatttgtgtgtgaaaatcaattctagaatcaaaaactacaaatctt 38845461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 207
Target Start/End: Original strand, 18851000 - 18851147
Alignment:
Q  59 attttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaa 158  Q
    |||||||||||||||||| |  || ||||||||||| || ||||  || | |  ||| ||| ||||||||||||||  |||||| |||||||||||| ||    
T  18851000 attttgatagaattgattctcaataattgattttggttaaaagtaattttgactaaatgtggtttgtgtttggataacttcatgtaaaagtgagttt-aa 18851098  T
Q  159 caataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    | |||||| | ||||| |||| ||||| || |||||||| |||| ||||    
T  18851099 ctataaatatgtgtgtgaaaatcaattctataatcaaaagctacaaatc 18851147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 42858250 - 42858138
Alignment:
Q  84 attgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaa 183  Q
    ||||||||||| || || || |||| |  ||||||||| |||||||| ||| ||||||| ||||||||| || ||| |||||||| ||||| |||| |||    
T  42858250 attgattttggttaaaaatgattctgactaaaagtgatctgtgtttgaataaattcatgtaaaagtgag-ttgaactataaatttgtgtgtgaaaatcaa 42858152  T
Q  184 ttataaaatcaaaa 197  Q
    ||||| ||| ||||    
T  42858151 ttatagaattaaaa 42858138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 6951286 - 6951370
Alignment:
Q  122 ttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatc 207  Q
    |||| |||||||| ||||||| |||||||| || ||  | |||||||||||||| ||| |||||||| |||||||| |||| ||||    
T  6951286 ttgtatttggataaattcatgtaaaagtgaattgaatta-taaatttatgtgtacaaatcaattatagaatcaaaagctacaaatc 6951370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 10898821 - 10898762
Alignment:
Q  125 tgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaatta 186  Q
    ||||||||||| |||||| ||||||||||| || |||||||||| |||||||||| ||||||    
T  10898821 tgtttggatag-ttcatgtaaaagtgagttgaa-caataaatttgtgtgtaaaaatcaatta 10898762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 24306107 - 24306151
Alignment:
Q  153 tttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaa 197  Q
    ||||||||||||||||  ||||||||| |||||||| ||||||||    
T  24306107 tttaaacaataaatttgagtgtaaaaatcaattatagaatcaaaa 24306151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 24367209 - 24367165
Alignment:
Q  153 tttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaa 197  Q
    ||||||||||||||||  ||||||||| |||||||| ||||||||    
T  24367209 tttaaacaataaatttgagtgtaaaaatcaattatagaatcaaaa 24367165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 1616561 - 1616462
Alignment:
Q  54 aattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagt 153  Q
    |||| |||||||||||||||||||||||  ||||||||||| || || |  |||||| | |||||| |||||||||| ||| ||||||| |||| |||||    
T  1616561 aattgattttgatagaattgattttgtagaattgattttggttaaaattaattctaa-ctaaagtggtttgtgtttgaatacattcatgtaaaaatgagt 1616463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 35065175 - 35065093
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaa 197  Q
    ||||||||||||||||||||| ||||||| ||||||||||  | |  |||||||| |||||||||| ||||| || ||||||||    
T  35065175 aaagtgatttgtgtttggatacattcatgtaaaagtgagtggaga-tataaatttgtgtgtaaaaatcaattctagaatcaaaa 35065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 21691186 - 21691279
Alignment:
Q  115 aagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatctt 209  Q
    |||||||||||||||||||| ||||||| ||||||| | || ||| |||||||| ||||| |||| ||||| || || ||||| |||| ||||||    
T  21691186 aagtgatttgtgtttggatatattcatgtaaaagtgtg-ttgaactataaatttgtgtgtgaaaatcaattctacaaccaaaagctacaaatctt 21691279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 34759468 - 34759543
Alignment:
Q  121 tttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaa 198  Q
    ||||||||| |||| ||||||   ||||||||||  ||||||||||| ||||||||||| |||||||| |||||||||    
T  34759468 tttgtgtttagatacattcattttaaagtgagtt--aacaataaattaatgtgtaaaaatcaattatagaatcaaaaa 34759543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 39733577 - 39733646
Alignment:
Q  78 tgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaa 147  Q
    ||||| ||||||||||| || ||||  |||| || |||||||||||||||||||||| ||| ||| ||||    
T  39733577 tgtataattgattttggttaaaagtaattctgattaaaagtgatttgtgtttggatacatttatgaaaaa 39733646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 16552127 - 16552027
Alignment:
Q  54 aattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggatagattcatgcaaaagtgagt 153  Q
    |||| |||||||| ||||| ||| | ||| ||||||||||| || ||||  || | || ||| |||||||| | ||||||| ||||||| ||||||||||    
T  16552127 aattgattttgatggaattaattctatataattgattttggttaaaagtaattatgattaaacgtgatttgagattggatacattcatgtaaaagtgagt 16552028  T
Q  154 t 154  Q
    |    
T  16552027 t 16552027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 40491690 - 40491586
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaaacaataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatcttgact 213  Q
    |||||||||| | |||||||| ||||||| ||||||||| ||||||  ||||||| |||||||||  ||||| || |||||||| |||| || ||| |||    
T  40491690 aaagtgatttatttttggatacattcatgtaaaagtgag-ttaaactttaaatttgtgtgtaaaagtcaattctagaatcaaaagctacaaaacttaact 40491592  T
Q  214 acaagt 219  Q
     |||||    
T  40491591 tcaagt 40491586  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 12306835 - 12306751
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtttaa-acaataaatttatgtgtaaaaaccaattataaaatcaaaa 197  Q
    |||||||||| ||||||| |||||||||| ||||||||||| || | | | |||||  ||||||||| ||||| |||||||||||    
T  12306835 aaagtgatttatgtttggctagattcatgtaaaagtgagttgaatatagtgaatttgagtgtaaaaatcaattctaaaatcaaaa 12306751  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 45557477 - 45557437
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtt 154  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  45557477 aaagtgatttgtgtttggatacattcatgtaaaagtgagtt 45557437  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 35772324 - 35772276
Alignment:
Q  161 ataaatttatgtgtaaaaaccaattataaaatcaaaaactacgaatctt 209  Q
    |||||||||| ||| |||| ||||| |||||||||||||||| ||||||    
T  35772324 ataaatttatttgtgaaaatcaattctaaaatcaaaaactacaaatctt 35772276  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 40561731 - 40561771
Alignment:
Q  114 aaagtgatttgtgtttggatagattcatgcaaaagtgagtt 154  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  40561731 aaagtgatttatgtttggatacattcatgtaaaagtgagtt 40561771  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 15239 - 15322
Alignment:
Q  51 gaaaattcattttgatagaattgattttgtatgattgattttggctagaagtggttctaatcaaaagtgatttgtgtttggata 134  Q
    ||||||| ||||||||||||||||||||||   ||||||||||| || |||||  |  |||  |||||||||| ||||||||||    
T  15239 gaaaattgattttgatagaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggata 15322  T

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